Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37570.t1 | XP_003617205.1 | 96.9 | 97 | 3 | 0 | 1 | 97 | 24 | 120 | 3.40E-42 | 180.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37570.t1 | G7KCU3 | 96.9 | 97 | 3 | 0 | 1 | 97 | 24 | 120 | 2.4e-42 | 180.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene37570 | 0.846523 | 2.06E-59 | -1.69E-46 |
| MS.gene04918 | MS.gene37570 | 0.809214 | 2.11E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene37570 | 0.814757 | 1.31E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene37570 | 0.831578 | 1.54E-55 | -1.69E-46 |
| MS.gene049368 | MS.gene37570 | 0.842401 | 2.65E-58 | -1.69E-46 |
| MS.gene049499 | MS.gene37570 | 0.810731 | 9.96E-51 | -1.69E-46 |
| MS.gene049652 | MS.gene37570 | 0.804526 | 2.07E-49 | -1.69E-46 |
| MS.gene049786 | MS.gene37570 | 0.815919 | 7.22E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene37570 | 0.807515 | 4.87E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene37570 | 0.824119 | 9.59E-54 | -1.69E-46 |
| MS.gene050253 | MS.gene37570 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene37570 | 0.821738 | 3.44E-53 | -1.69E-46 |
| MS.gene050828 | MS.gene37570 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene37570 | 0.825308 | 5.03E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene37570 | 0.81802 | 2.44E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene37570 | 0.828721 | 7.68E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene37570 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene051365 | MS.gene37570 | 0.812007 | 5.26E-51 | -1.69E-46 |
| MS.gene051490 | MS.gene37570 | 0.810053 | 1.40E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene37570 | 0.860617 | 1.82E-63 | -1.69E-46 |
| MS.gene051700 | MS.gene37570 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene37570 | 0.830901 | 2.26E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene37570 | 0.839034 | 2.02E-57 | -1.69E-46 |
| MS.gene051902 | MS.gene37570 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene37570 | 0.892368 | 1.69E-74 | -1.69E-46 |
| MS.gene052072 | MS.gene37570 | 0.818511 | 1.89E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene37570 | 0.819975 | 8.76E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene37570 | 0.814668 | 1.37E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene37570 | 0.818023 | 2.43E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene37570 | 0.812622 | 3.87E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene37570 | 0.840654 | 7.63E-58 | -1.69E-46 |
| MS.gene052609 | MS.gene37570 | 0.810039 | 1.41E-50 | -1.69E-46 |
| MS.gene052889 | MS.gene37570 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene37570 | 0.812354 | 4.42E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene37570 | 0.817681 | 2.91E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene37570 | 0.821332 | 4.27E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene37570 | 0.825571 | 4.36E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene37570 | 0.8074 | 5.15E-50 | -1.69E-46 |
| MS.gene05469 | MS.gene37570 | 0.825827 | 3.79E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene37570 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene37570 | 0.81093 | 9.02E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene37570 | 0.822028 | 2.95E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene37570 | 0.819595 | 1.07E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene37570 | 0.855649 | 5.48E-62 | -1.69E-46 |
| MS.gene055314 | MS.gene37570 | 0.826624 | 2.45E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene37570 | 0.87377 | 1.14E-67 | -1.69E-46 |
| MS.gene055603 | MS.gene37570 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene37570 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene37570 | 0.800456 | 1.43E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene37570 | 0.806335 | 8.65E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene37570 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene056403 | MS.gene37570 | 0.808003 | 3.83E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene37570 | 0.890855 | 6.76E-74 | -1.69E-46 |
| MS.gene056825 | MS.gene37570 | 0.815485 | 9.03E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene37570 | 0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene37570 | 0.872932 | 2.17E-67 | -1.69E-46 |
| MS.gene057034 | MS.gene37570 | 0.844038 | 9.68E-59 | -1.69E-46 |
| MS.gene057102 | MS.gene37570 | 0.891892 | 2.62E-74 | -1.69E-46 |
| MS.gene057155 | MS.gene37570 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene37570 | 0.828167 | 1.04E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene37570 | 0.81139 | 7.17E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene37570 | 0.800207 | 1.61E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene37570 | 0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene37570 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene37570 | 0.833455 | 5.28E-56 | -1.69E-46 |
| MS.gene059170 | MS.gene37570 | 0.82267 | 2.09E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene37570 | 0.830433 | 2.95E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene37570 | -0.862288 | 5.64E-64 | -1.69E-46 |
| MS.gene059965 | MS.gene37570 | 0.835924 | 1.26E-56 | -1.69E-46 |
| MS.gene06011 | MS.gene37570 | 0.844837 | 5.90E-59 | -1.69E-46 |
| MS.gene060259 | MS.gene37570 | 0.801146 | 1.03E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene37570 | 0.845292 | 4.45E-59 | -1.69E-46 |
| MS.gene060697 | MS.gene37570 | 0.828873 | 7.06E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene37570 | 0.822261 | 2.60E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene37570 | 0.840186 | 1.01E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene37570 | 0.849217 | 3.73E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene37570 | 0.812342 | 4.45E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene37570 | 0.845318 | 4.38E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37570.t1 | MTR_5g089030 | 96.907 | 97 | 3 | 0 | 1 | 97 | 24 | 120 | 4.76e-64 | 189 |
| MS.gene37570.t1 | MTR_5g089030 | 96.907 | 97 | 3 | 0 | 1 | 97 | 17 | 113 | 6.23e-64 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37570.t1 | AT5G12240 | 51.316 | 76 | 34 | 3 | 23 | 96 | 40 | 114 | 2.88e-16 | 68.6 |
Find 17 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAACTAACAGATTCATTT+TGG | 0.150883 | 5.2:-75572606 | MS.gene37570:intron |
| TTTAGATGTTGCTCGAAAAT+TGG | 0.248254 | 5.2:-75571273 | MS.gene37570:CDS |
| AAAGTCAGAGGCTGCTAAAA+AGG | 0.332380 | 5.2:-75572575 | MS.gene37570:intron |
| AGATCCAGGTGTTAATTGTC+TGG | 0.439476 | 5.2:+75572930 | None:intergenic |
| TTAACACCTGGATCTGGATC+TGG | 0.464092 | 5.2:-75572922 | MS.gene37570:CDS |
| AGACAATTAACACCTGGATC+TGG | 0.479178 | 5.2:-75572928 | MS.gene37570:CDS |
| GCAGATCCAGATCCAGATCC+AGG | 0.505288 | 5.2:+75572916 | None:intergenic |
| TGCATGGAATGAAAAGGATA+AGG | 0.508203 | 5.2:-75572789 | MS.gene37570:CDS |
| TATCACTGCAGCTAAATGAA+TGG | 0.519982 | 5.2:-75572817 | MS.gene37570:intron |
| ATCTGGATCTGCACAGGAAG+AGG | 0.529978 | 5.2:-75572905 | MS.gene37570:intron |
| ATCTGGATCTGGATCTGCAC+AGG | 0.538020 | 5.2:-75572911 | MS.gene37570:CDS |
| GCATGATGCATGGAATGAAA+AGG | 0.553411 | 5.2:-75572795 | MS.gene37570:CDS |
| TTGGAACAAGCTAAAGTCAG+AGG | 0.617833 | 5.2:-75572587 | MS.gene37570:CDS |
| ACAGGTTGGTACAGAAGAAG+CGG | 0.620709 | 5.2:-75571704 | MS.gene37570:intron |
| TAAATGAATGGCATGATGCA+TGG | 0.637004 | 5.2:-75572805 | MS.gene37570:CDS |
| TCATCCAGACAATTAACACC+TGG | 0.646730 | 5.2:-75572934 | MS.gene37570:CDS |
| AATCAAGGAATCAACAAACA+TGG | 0.667146 | 5.2:-75572758 | MS.gene37570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATGAATAAAATTGA+TGG | - | chr5.2:75572815-75572834 | MS.gene37570:intron | 10.0% |
| !! | TTGTTCTTAATTATTAAAAA+TGG | - | chr5.2:75571718-75571737 | MS.gene37570:intron | 10.0% |
| !!! | ATTTTTAATAATTAAGAACA+AGG | + | chr5.2:75571719-75571738 | None:intergenic | 10.0% |
| !!! | TAAAACAATAAAAGAATTTT+TGG | + | chr5.2:75572892-75572911 | None:intergenic | 10.0% |
| !!! | TTTTATTCATTTATATTTTC+TGG | + | chr5.2:75572811-75572830 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTTATTTCTTT+AGG | - | chr5.2:75572899-75572918 | MS.gene37570:intron | 10.0% |
| !!! | AAATGAACATTTTGTTTTTT+AGG | - | chr5.2:75572682-75572701 | MS.gene37570:intron | 15.0% |
| !!! | AATGAACATTTTGTTTTTTA+GGG | - | chr5.2:75572683-75572702 | MS.gene37570:intron | 15.0% |
| !!! | GTTTAAATGATTATCATTTT+GGG | - | chr5.2:75572575-75572594 | MS.gene37570:intron | 15.0% |
| !! | AAAATCAAAGTAATTCAAAC+TGG | + | chr5.2:75571960-75571979 | None:intergenic | 20.0% |
| !! | AAATCAAAGTAATTCAAACT+GGG | + | chr5.2:75571959-75571978 | None:intergenic | 20.0% |
| !! | ATAATTAAGAACAAGGATAA+TGG | + | chr5.2:75571712-75571731 | None:intergenic | 20.0% |
| !! | ATGTAAAGAAAAAGTAAACA+AGG | + | chr5.2:75571781-75571800 | None:intergenic | 20.0% |
| !! | ATTTATAGAAAGTAGTTTCT+TGG | - | chr5.2:75572637-75572656 | MS.gene37570:intron | 20.0% |
| !! | TGTAAAGAAAAAGTAAACAA+GGG | + | chr5.2:75571780-75571799 | None:intergenic | 20.0% |
| !! | TTGAAAGTTTCATTTAATGA+TGG | - | chr5.2:75572161-75572180 | MS.gene37570:intron | 20.0% |
| !!! | ATGAACATTTTGTTTTTTAG+GGG | - | chr5.2:75572684-75572703 | MS.gene37570:intron | 20.0% |
| !!! | CGTTTAAATGATTATCATTT+TGG | - | chr5.2:75572574-75572593 | MS.gene37570:intron | 20.0% |
| !!! | TTATATTTTCTGGAATTTCA+TGG | + | chr5.2:75572801-75572820 | None:intergenic | 20.0% |
| !!! | TTCTTTCATAGAAAGTATTA+TGG | - | chr5.2:75572600-75572619 | MS.gene37570:intron | 20.0% |
| !!! | TTGATGATTTTGTAAAGATA+GGG | - | chr5.2:75572193-75572212 | MS.gene37570:intron | 20.0% |
| ! | AACATAGCACATGTTTATAT+TGG | - | chr5.2:75571741-75571760 | MS.gene37570:intron | 25.0% |
| ! | ATTGGTTATAATGTTTCAAC+AGG | - | chr5.2:75572489-75572508 | MS.gene37570:intron | 25.0% |
| !! | AAAATGAATCTGTTAGTTTG+GGG | + | chr5.2:75571606-75571625 | None:intergenic | 25.0% |
| !! | AAAGAAGTCTTTCATTGATT+AGG | - | chr5.2:75572715-75572734 | MS.gene37570:intron | 25.0% |
| !! | ATTTTGTTACAACAATCAAC+TGG | - | chr5.2:75571542-75571561 | MS.gene37570:intron | 25.0% |
| !! | CAAAATGAATCTGTTAGTTT+GGG | + | chr5.2:75571607-75571626 | None:intergenic | 25.0% |
| !! | GATGTATTTGTTGAACAATA+AGG | + | chr5.2:75571491-75571510 | None:intergenic | 25.0% |
| !! | TGATGATTTTGTAAAGATAG+GGG | - | chr5.2:75572194-75572213 | MS.gene37570:intron | 25.0% |
| !!! | GTTGATGATTTTGTAAAGAT+AGG | - | chr5.2:75572192-75572211 | MS.gene37570:intron | 25.0% |
| AAAGTAATTCAAACTGGGTT+TGG | + | chr5.2:75571954-75571973 | None:intergenic | 30.0% | |
| AAATTGTCACACGCATAAAT+AGG | - | chr5.2:75572327-75572346 | MS.gene37570:intron | 30.0% | |
| AATCAAGGAATCAACAAACA+TGG | - | chr5.2:75571453-75571472 | MS.gene37570:intron | 30.0% | |
| AATTGTCACACGCATAAATA+GGG | - | chr5.2:75572328-75572347 | MS.gene37570:intron | 30.0% | |
| ATAAAAATTCTTGTCCCATC+TGG | - | chr5.2:75572048-75572067 | MS.gene37570:intron | 30.0% | |
| ATTTATGCGTGTGACAATTT+AGG | + | chr5.2:75572327-75572346 | None:intergenic | 30.0% | |
| CCAAAATGAATCTGTTAGTT+TGG | + | chr5.2:75571608-75571627 | None:intergenic | 30.0% | |
| GCTTTAACCTTAAAAGTTTG+AGG | - | chr5.2:75571833-75571852 | MS.gene37570:intron | 30.0% | |
| GTATGCATGTAAAAATAAGC+AGG | + | chr5.2:75571675-75571694 | None:intergenic | 30.0% | |
| GTTATAATGTTTCAACAGGT+TGG | - | chr5.2:75572493-75572512 | MS.gene37570:intron | 30.0% | |
| TCTCTTTATCATGTTTGTGA+AGG | - | chr5.2:75572291-75572310 | MS.gene37570:intron | 30.0% | |
| TTTAGATGTTGCTCGAAAAT+TGG | - | chr5.2:75572938-75572957 | MS.gene37570:CDS | 30.0% | |
| ! | CCAAACTAACAGATTCATTT+TGG | - | chr5.2:75571605-75571624 | MS.gene37570:intron | 30.0% |
| ! | TAATCAGCCTCAAACTTTTA+AGG | + | chr5.2:75571843-75571862 | None:intergenic | 30.0% |
| !! | GATAAGGATTTTGAGAATCA+AGG | - | chr5.2:75571438-75571457 | MS.gene37570:intron | 30.0% |
| !!! | ATTTTTTTCACATGCCAGAT+GGG | + | chr5.2:75572065-75572084 | None:intergenic | 30.0% |
| AGGGATAAAAGATAAGTGAG+AGG | - | chr5.2:75572347-75572366 | MS.gene37570:intron | 35.0% | |
| GGATAAAAGATAAGTGAGAG+GGG | - | chr5.2:75572349-75572368 | MS.gene37570:intron | 35.0% | |
| GGGATAAAAGATAAGTGAGA+GGG | - | chr5.2:75572348-75572367 | MS.gene37570:intron | 35.0% | |
| TAAATGAATGGCATGATGCA+TGG | - | chr5.2:75571406-75571425 | MS.gene37570:intron | 35.0% | |
| TATCACTGCAGCTAAATGAA+TGG | - | chr5.2:75571394-75571413 | MS.gene37570:intron | 35.0% | |
| TGCATGGAATGAAAAGGATA+AGG | - | chr5.2:75571422-75571441 | MS.gene37570:intron | 35.0% | |
| !!! | CATTTTTTTCACATGCCAGA+TGG | + | chr5.2:75572066-75572085 | None:intergenic | 35.0% |
| AAAGTCAGAGGCTGCTAAAA+AGG | - | chr5.2:75571636-75571655 | MS.gene37570:intron | 40.0% | |
| AGACAATTAACACCTGGATC+TGG | - | chr5.2:75571283-75571302 | MS.gene37570:CDS | 40.0% | |
| AGATCCAGGTGTTAATTGTC+TGG | + | chr5.2:75571284-75571303 | None:intergenic | 40.0% | |
| GCATGATGCATGGAATGAAA+AGG | - | chr5.2:75571416-75571435 | MS.gene37570:intron | 40.0% | |
| GGTTTCAAAGGAAAGGACTA+AGG | + | chr5.2:75572110-75572129 | None:intergenic | 40.0% | |
| TAGAATGACACTACGCTCAT+TGG | - | chr5.2:75572471-75572490 | MS.gene37570:intron | 40.0% | |
| TCATCCAGACAATTAACACC+TGG | - | chr5.2:75571277-75571296 | MS.gene37570:CDS | 40.0% | |
| TTCAAAGGAAAGGACTAAGG+AGG | + | chr5.2:75572107-75572126 | None:intergenic | 40.0% | |
| TTGGAACAAGCTAAAGTCAG+AGG | - | chr5.2:75571624-75571643 | MS.gene37570:intron | 40.0% | |
| ! | AGAAGCGGAAAGATTTTGCA+AGG | - | chr5.2:75572522-75572541 | MS.gene37570:intron | 40.0% |
| ! | ATAGGGGAGATTGTTGTTGT+AGG | - | chr5.2:75572210-75572229 | MS.gene37570:intron | 40.0% |
| ! | CTAGGGTGTTATAACTGTGA+TGG | - | chr5.2:75572387-75572406 | MS.gene37570:intron | 40.0% |
| TGCATGCAAACCAAGTCTAC+TGG | + | chr5.2:75572138-75572157 | None:intergenic | 45.0% | |
| TTAACACCTGGATCTGGATC+TGG | - | chr5.2:75571289-75571308 | MS.gene37570:CDS | 45.0% | |
| !! | ACAGGTTGGTACAGAAGAAG+CGG | - | chr5.2:75572507-75572526 | MS.gene37570:intron | 45.0% |
| !! | GTCCTTTCCTTTGAAACCAG+TGG | - | chr5.2:75572112-75572131 | MS.gene37570:intron | 45.0% |
| AAACCAAGTCTACTGGCCAC+TGG | + | chr5.2:75572131-75572150 | None:intergenic | 50.0% | |
| AAACCAGTGGCCAGTAGACT+TGG | - | chr5.2:75572125-75572144 | MS.gene37570:intron | 50.0% | |
| AGGAAAGGACTAAGGAGGCA+AGG | + | chr5.2:75572102-75572121 | None:intergenic | 50.0% | |
| ATCTGGATCTGCACAGGAAG+AGG | - | chr5.2:75571306-75571325 | MS.gene37570:intron | 50.0% | |
| ATCTGGATCTGGATCTGCAC+AGG | - | chr5.2:75571300-75571319 | MS.gene37570:intron | 50.0% | |
| GGTACATGTGTGTTGGGCTA+GGG | - | chr5.2:75572370-75572389 | MS.gene37570:intron | 50.0% | |
| TGCACAGGAAGAGGTAGTTG+TGG | - | chr5.2:75571315-75571334 | MS.gene37570:intron | 50.0% | |
| ! | CTGTGATGGTGATGTTGCAG+AGG | - | chr5.2:75572401-75572420 | MS.gene37570:intron | 50.0% |
| ! | GAGAGGGGTACATGTGTGTT+GGG | - | chr5.2:75572364-75572383 | MS.gene37570:intron | 50.0% |
| ! | TGAGAGGGGTACATGTGTGT+TGG | - | chr5.2:75572363-75572382 | MS.gene37570:intron | 50.0% |
| !! | CTACTGGCCACTGGTTTCAA+AGG | + | chr5.2:75572122-75572141 | None:intergenic | 50.0% |
| !! | GGCCACTGGTTTCAAAGGAA+AGG | + | chr5.2:75572117-75572136 | None:intergenic | 50.0% |
| GCAGATCCAGATCCAGATCC+AGG | + | chr5.2:75571298-75571317 | None:intergenic | 55.0% | |
| GGGTACATGTGTGTTGGGCT+AGG | - | chr5.2:75572369-75572388 | MS.gene37570:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 75571259 | 75572974 | 75571259 | ID=MS.gene37570 |
| chr5.2 | mRNA | 75571259 | 75572974 | 75571259 | ID=MS.gene37570.t1;Parent=MS.gene37570 |
| chr5.2 | exon | 75572906 | 75572974 | 75572906 | ID=MS.gene37570.t1.exon1;Parent=MS.gene37570.t1 |
| chr5.2 | CDS | 75572906 | 75572974 | 75572906 | ID=cds.MS.gene37570.t1;Parent=MS.gene37570.t1 |
| chr5.2 | exon | 75572759 | 75572828 | 75572759 | ID=MS.gene37570.t1.exon2;Parent=MS.gene37570.t1 |
| chr5.2 | CDS | 75572759 | 75572828 | 75572759 | ID=cds.MS.gene37570.t1;Parent=MS.gene37570.t1 |
| chr5.2 | exon | 75572576 | 75572616 | 75572576 | ID=MS.gene37570.t1.exon3;Parent=MS.gene37570.t1 |
| chr5.2 | CDS | 75572576 | 75572616 | 75572576 | ID=cds.MS.gene37570.t1;Parent=MS.gene37570.t1 |
| chr5.2 | exon | 75571663 | 75571722 | 75571663 | ID=MS.gene37570.t1.exon4;Parent=MS.gene37570.t1 |
| chr5.2 | CDS | 75571663 | 75571722 | 75571663 | ID=cds.MS.gene37570.t1;Parent=MS.gene37570.t1 |
| chr5.2 | exon | 75571259 | 75571312 | 75571259 | ID=MS.gene37570.t1.exon5;Parent=MS.gene37570.t1 |
| chr5.2 | CDS | 75571259 | 75571312 | 75571259 | ID=cds.MS.gene37570.t1;Parent=MS.gene37570.t1 |
| Gene Sequence |
| Protein sequence |
