Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064969.t1 | XP_013467164.1 | 98.5 | 650 | 10 | 0 | 1 | 650 | 1 | 650 | 0.00E+00 | 1245.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064969.t1 | Q5F259 | 32.8 | 271 | 155 | 6 | 52 | 308 | 31 | 288 | 9.1e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064969.t1 | A0A072VSU6 | 98.5 | 650 | 10 | 0 | 1 | 650 | 1 | 650 | 0.0e+00 | 1245.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene064969 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene04919 | MS.gene064969 | 0.824904 | 6.27E-54 | -1.69E-46 |
| MS.gene04920 | MS.gene064969 | 0.84144 | 4.75E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene064969 | 0.878353 | 3.01E-69 | -1.69E-46 |
| MS.gene049419 | MS.gene064969 | -0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene064969 | 0.810609 | 1.06E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene064969 | 0.818429 | 1.97E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene064969 | 0.811457 | 6.94E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene064969 | 0.846389 | 2.24E-59 | -1.69E-46 |
| MS.gene04998 | MS.gene064969 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene064969 | 0.814075 | 1.85E-51 | -1.69E-46 |
| MS.gene050571 | MS.gene064969 | 0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene064969 | 0.804214 | 2.41E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene064969 | 0.832667 | 8.29E-56 | -1.69E-46 |
| MS.gene050941 | MS.gene064969 | 0.823039 | 1.72E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene064969 | 0.816985 | 4.17E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene064969 | 0.818946 | 1.50E-52 | -1.69E-46 |
| MS.gene051154 | MS.gene064969 | 0.814535 | 1.47E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene064969 | 0.847858 | 8.86E-60 | -1.69E-46 |
| MS.gene051597 | MS.gene064969 | 0.812546 | 4.01E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene064969 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene064969 | 0.855539 | 5.89E-62 | -1.69E-46 |
| MS.gene051902 | MS.gene064969 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene064969 | 0.824146 | 9.45E-54 | -1.69E-46 |
| MS.gene052108 | MS.gene064969 | 0.812449 | 4.22E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene064969 | 0.829873 | 4.03E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene064969 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene064969 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene052518 | MS.gene064969 | 0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene052685 | MS.gene064969 | 0.815608 | 8.47E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene064969 | 0.831575 | 1.54E-55 | -1.69E-46 |
| MS.gene052889 | MS.gene064969 | 0.808478 | 3.04E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene064969 | 0.814961 | 1.18E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene064969 | -0.819748 | 9.87E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene064969 | 0.82939 | 5.29E-55 | -1.69E-46 |
| MS.gene053564 | MS.gene064969 | 0.801159 | 1.03E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene064969 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene053879 | MS.gene064969 | 0.831934 | 1.26E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene064969 | 0.857682 | 1.38E-62 | -1.69E-46 |
| MS.gene054222 | MS.gene064969 | 0.822429 | 2.38E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene064969 | 0.842864 | 1.99E-58 | -1.69E-46 |
| MS.gene054892 | MS.gene064969 | 0.86641 | 2.91E-65 | -1.69E-46 |
| MS.gene054893 | MS.gene064969 | 0.866663 | 2.42E-65 | -1.69E-46 |
| MS.gene054957 | MS.gene064969 | 0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene055147 | MS.gene064969 | 0.807815 | 4.20E-50 | -1.69E-46 |
| MS.gene055222 | MS.gene064969 | 0.812875 | 3.40E-51 | -1.69E-46 |
| MS.gene055226 | MS.gene064969 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene055229 | MS.gene064969 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene064969 | 0.829325 | 5.48E-55 | -1.69E-46 |
| MS.gene055724 | MS.gene064969 | 0.800666 | 1.30E-48 | -1.69E-46 |
| MS.gene055841 | MS.gene064969 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene064969 | 0.833217 | 6.06E-56 | -1.69E-46 |
| MS.gene056071 | MS.gene064969 | 0.809557 | 1.78E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene064969 | 0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene056315 | MS.gene064969 | 0.822736 | 2.02E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene064969 | 0.832108 | 1.14E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene064969 | 0.825616 | 4.25E-54 | -1.69E-46 |
| MS.gene056787 | MS.gene064969 | 0.80744 | 5.05E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene064969 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene056831 | MS.gene064969 | 0.819016 | 1.45E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene064969 | 0.81788 | 2.62E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene064969 | 0.824194 | 9.21E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene064969 | 0.807212 | 5.64E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene064969 | 0.845712 | 3.42E-59 | -1.69E-46 |
| MS.gene057155 | MS.gene064969 | 0.834458 | 2.96E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene064969 | 0.85626 | 3.63E-62 | -1.69E-46 |
| MS.gene057598 | MS.gene064969 | 0.810729 | 9.97E-51 | -1.69E-46 |
| MS.gene057622 | MS.gene064969 | 0.805548 | 1.27E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene064969 | -0.82879 | 7.39E-55 | -1.69E-46 |
| MS.gene057893 | MS.gene064969 | -0.819379 | 1.20E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene064969 | 0.813006 | 3.18E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene064969 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene064969 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene064969 | 0.836679 | 8.12E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene064969 | -0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene064969 | 0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene058355 | MS.gene064969 | 0.811313 | 7.45E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene064969 | 0.822268 | 2.59E-53 | -1.69E-46 |
| MS.gene058592 | MS.gene064969 | 0.861959 | 7.11E-64 | -1.69E-46 |
| MS.gene058708 | MS.gene064969 | -0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene064969 | 0.813793 | 2.14E-51 | -1.69E-46 |
| MS.gene05878 | MS.gene064969 | 0.823999 | 1.02E-53 | -1.69E-46 |
| MS.gene059144 | MS.gene064969 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene064969 | 0.824271 | 8.84E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene064969 | 0.808321 | 3.28E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene064969 | 0.871504 | 6.50E-67 | -1.69E-46 |
| MS.gene05956 | MS.gene064969 | 0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene064969 | -0.867521 | 1.29E-65 | -1.69E-46 |
| MS.gene059965 | MS.gene064969 | 0.810583 | 1.07E-50 | -1.69E-46 |
| MS.gene06018 | MS.gene064969 | 0.810978 | 8.81E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene064969 | 0.851781 | 7.10E-61 | -1.69E-46 |
| MS.gene060365 | MS.gene064969 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene060412 | MS.gene064969 | 0.834246 | 3.35E-56 | -1.69E-46 |
| MS.gene060413 | MS.gene064969 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene060426 | MS.gene064969 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene060522 | MS.gene064969 | 0.803939 | 2.74E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene064969 | 0.837063 | 6.48E-57 | -1.69E-46 |
| MS.gene060777 | MS.gene064969 | 0.868424 | 6.60E-66 | -1.69E-46 |
| MS.gene060840 | MS.gene064969 | 0.809092 | 2.25E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene064969 | 0.854067 | 1.58E-61 | -1.69E-46 |
| MS.gene060933 | MS.gene064969 | 0.83713 | 6.23E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene064969 | 0.859541 | 3.85E-63 | -1.69E-46 |
| MS.gene060937 | MS.gene064969 | 0.876656 | 1.17E-68 | -1.69E-46 |
| MS.gene061100 | MS.gene064969 | 0.853809 | 1.87E-61 | -1.69E-46 |
| MS.gene061160 | MS.gene064969 | 0.84609 | 2.70E-59 | -1.69E-46 |
| MS.gene06121 | MS.gene064969 | 0.820803 | 5.65E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064969.t1 | MTR_1g046580 | 98.462 | 650 | 10 | 0 | 1 | 650 | 1 | 650 | 0.0 | 1316 |
| MS.gene064969.t1 | MTR_7g115580 | 56.162 | 641 | 246 | 12 | 5 | 631 | 29 | 648 | 0.0 | 680 |
| MS.gene064969.t1 | MTR_1g080310 | 53.448 | 638 | 249 | 11 | 5 | 636 | 3 | 598 | 0.0 | 632 |
| MS.gene064969.t1 | MTR_2g023450 | 43.423 | 631 | 257 | 10 | 8 | 626 | 19 | 561 | 1.56e-164 | 484 |
| MS.gene064969.t1 | MTR_1g046930 | 62.248 | 347 | 129 | 2 | 1 | 346 | 1 | 346 | 1.22e-147 | 440 |
| MS.gene064969.t1 | MTR_1g046930 | 57.386 | 176 | 65 | 3 | 474 | 647 | 401 | 568 | 3.77e-50 | 184 |
| MS.gene064969.t1 | MTR_1g115930 | 57.407 | 54 | 23 | 0 | 56 | 109 | 33 | 86 | 2.67e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064969.t1 | AT1G04780 | 70.977 | 665 | 166 | 13 | 4 | 649 | 6 | 662 | 0.0 | 891 |
| MS.gene064969.t1 | AT3G24210 | 62.282 | 631 | 196 | 10 | 1 | 630 | 1 | 590 | 0.0 | 748 |
| MS.gene064969.t1 | AT3G04470 | 53.282 | 655 | 223 | 12 | 5 | 631 | 3 | 602 | 0.0 | 665 |
| MS.gene064969.t1 | AT1G62050 | 43.451 | 649 | 270 | 14 | 9 | 627 | 18 | 599 | 7.89e-165 | 486 |
| MS.gene064969.t1 | AT1G11740 | 52.318 | 302 | 141 | 1 | 9 | 310 | 17 | 315 | 8.65e-106 | 334 |
| MS.gene064969.t1 | AT1G11740 | 47.953 | 171 | 61 | 4 | 479 | 628 | 364 | 527 | 1.97e-37 | 148 |
Find 157 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACTTGGCTGTTAAATT+AGG | 0.055054 | 1.4:-31192913 | MS.gene064969:CDS |
| TTCACTTGGCTGTTAAATTA+GGG | 0.214370 | 1.4:-31192912 | MS.gene064969:CDS |
| CTTCAGACACTTACAAGATT+TGG | 0.232931 | 1.4:-31192618 | MS.gene064969:CDS |
| TGAAAAGGTGAGCGATTTAT+TGG | 0.236609 | 1.4:-31191867 | MS.gene064969:CDS |
| GGAAAAGGGGTGCGAATCTA+AGG | 0.266382 | 1.4:-31192597 | MS.gene064969:CDS |
| TGTCTAAAACAAATATATTT+AGG | 0.297109 | 1.4:-31192366 | MS.gene064969:CDS |
| CAATTCCACCAGATTATACT+TGG | 0.314172 | 1.4:-31187459 | MS.gene064969:CDS |
| AAGGGTTGAGGCCTATTCTT+TGG | 0.318760 | 1.4:-31191679 | MS.gene064969:CDS |
| GGGATTGATGTTGCAAAGTT+TGG | 0.320650 | 1.4:-31193126 | MS.gene064969:CDS |
| ATCTTGGTTTCAGTGGATAA+AGG | 0.328101 | 1.4:-31187554 | MS.gene064969:CDS |
| GCATATTCAGGTTGCCATTC+CGG | 0.336485 | 1.4:-31187713 | MS.gene064969:intron |
| AGCCCCTGGCTTGGGCAAAA+TGG | 0.339204 | 1.4:-31192753 | MS.gene064969:CDS |
| CAATTGCCTTCTTTCATCTT+CGG | 0.347048 | 1.4:+31192120 | None:intergenic |
| CTGTGATACCTTTCATTTCA+AGG | 0.359358 | 1.4:-31192648 | MS.gene064969:CDS |
| ATAATGCTTAATTATGATCT+TGG | 0.368969 | 1.4:+31192777 | None:intergenic |
| GAGCAAGCACTAACCTTAAC+AGG | 0.374657 | 1.4:+31191530 | None:intergenic |
| GCTGAAATGCTTATGGTTGT+TGG | 0.381013 | 1.4:-31192877 | MS.gene064969:CDS |
| AGAATTTACAGAAGAAGCTT+TGG | 0.383345 | 1.4:+31191754 | None:intergenic |
| GCATTATCAGCCCCTGGCTT+GGG | 0.383859 | 1.4:-31192761 | MS.gene064969:CDS |
| TCTACGCAAAGAGAACTTCT+TGG | 0.388331 | 1.4:+31191890 | None:intergenic |
| CAATCTCTGCTGTGATTGAT+AGG | 0.391403 | 1.4:-31192963 | MS.gene064969:CDS |
| CTACCGTTACCATCTTCAAT+AGG | 0.394559 | 1.4:+31192010 | None:intergenic |
| GAAAAGGTGAGCGATTTATT+GGG | 0.399396 | 1.4:-31191866 | MS.gene064969:CDS |
| CTTGGTGATGGTTCAGAAGA+TGG | 0.403083 | 1.4:-31192508 | MS.gene064969:CDS |
| GGTGGAATTGCAAACGGGTC+TGG | 0.404701 | 1.4:+31187472 | None:intergenic |
| CAAATTTCTCTGCTTCATCT+TGG | 0.407176 | 1.4:-31187570 | MS.gene064969:CDS |
| ATAAAATCTAGAGGAGTTCC+TGG | 0.407650 | 1.4:-31192220 | MS.gene064969:CDS |
| TGGTCATAGTCCTGTTCATA+AGG | 0.411108 | 1.4:-31193106 | MS.gene064969:CDS |
| AGGATTATGGTGAGCTTAAG+AGG | 0.411282 | 1.4:-31193071 | MS.gene064969:CDS |
| CACTTACAAGATTTGGAAAA+GGG | 0.421955 | 1.4:-31192611 | MS.gene064969:CDS |
| AGGGCTGACATGACTTTGGC+TGG | 0.422895 | 1.4:-31192577 | MS.gene064969:CDS |
| GAACCTGCCGCAGATGAACT+AGG | 0.423474 | 1.4:+31187520 | None:intergenic |
| TTCTCTTTGCGTAGATGAAA+AGG | 0.429956 | 1.4:-31191882 | MS.gene064969:CDS |
| GTGTAGAAGGTTGCCTCGTT+TGG | 0.430443 | 1.4:-31192731 | MS.gene064969:CDS |
| AAACAGAAATGGTAGGATCT+TGG | 0.430531 | 1.4:-31192282 | MS.gene064969:CDS |
| GGTGAGCTTAAGAGGATACT+TGG | 0.431434 | 1.4:-31193063 | MS.gene064969:CDS |
| CTGCTTCATCTTGGTTTCAG+TGG | 0.434475 | 1.4:-31187561 | MS.gene064969:CDS |
| TTGTGCTGTTTAGGTATGGC+AGG | 0.436450 | 1.4:-31193147 | None:intergenic |
| GGTTTAATCTGATTACTTGA+AGG | 0.436796 | 1.4:+31191836 | None:intergenic |
| AGCATTATCAGCCCCTGGCT+TGG | 0.437529 | 1.4:-31192762 | MS.gene064969:CDS |
| GCAGAGAAATTTGTCGCTGC+AGG | 0.438127 | 1.4:+31187580 | None:intergenic |
| AAAATCACAGCCTTATGAAC+AGG | 0.440620 | 1.4:+31193096 | None:intergenic |
| CGAAGATGAAAGAAGGCAAT+TGG | 0.443916 | 1.4:-31192119 | MS.gene064969:CDS |
| CGTGAAAATGAATATAAGAA+AGG | 0.451631 | 1.4:-31191698 | MS.gene064969:CDS |
| ACACTTACAAGATTTGGAAA+AGG | 0.454221 | 1.4:-31192612 | MS.gene064969:CDS |
| AGAGACATTCCTATTGAAGA+TGG | 0.456127 | 1.4:-31192019 | MS.gene064969:CDS |
| CCTGACATGGATGGACTTGT+CGG | 0.456807 | 1.4:+31187613 | None:intergenic |
| GAGAAGAACAAATCAAAGAA+AGG | 0.457216 | 1.4:-31187403 | MS.gene064969:CDS |
| TCAGTTGACTTGGAGGCGCC+AGG | 0.458205 | 1.4:-31192308 | MS.gene064969:CDS |
| GAAAATAAGCAGGAAAAGAA+AGG | 0.458780 | 1.4:-31191977 | MS.gene064969:CDS |
| ATCGTTAAGTTCTTCACTCT+CGG | 0.461882 | 1.4:+31192150 | None:intergenic |
| TGAGATCATGCAGAGTGATC+CGG | 0.463016 | 1.4:+31192474 | None:intergenic |
| AGTGGCTGCTGAAATGCTTA+TGG | 0.466309 | 1.4:-31192884 | MS.gene064969:CDS |
| AGAAAGGATGGTTTGGTGGA+TGG | 0.466730 | 1.4:-31191961 | MS.gene064969:CDS |
| ATTGGAGGATGCACTTAAGC+TGG | 0.468456 | 1.4:-31192101 | MS.gene064969:CDS |
| GATGGTAACGGTAGCAATAG+TGG | 0.470448 | 1.4:-31192001 | MS.gene064969:CDS |
| CAGGAAAAGAAAGGATGGTT+TGG | 0.470506 | 1.4:-31191968 | MS.gene064969:CDS |
| ACTTACAACAAAACTTCCAA+TGG | 0.475435 | 1.4:-31191561 | MS.gene064969:CDS |
| AGAAGAACAAATCAAAGAAA+GGG | 0.475808 | 1.4:-31187402 | MS.gene064969:CDS |
| TAATCTGGTGGAATTGCAAA+CGG | 0.477515 | 1.4:+31187466 | None:intergenic |
| ACTCTGATGGTGGGAACCAC+CGG | 0.477517 | 1.4:+31187694 | None:intergenic |
| ATGACTTTGGCTGGTTTCGA+CGG | 0.483089 | 1.4:-31192568 | MS.gene064969:CDS |
| CATGATCTCACACAAGGAAA+AGG | 0.485210 | 1.4:-31192461 | MS.gene064969:CDS |
| ATAGGAATGTCTCTAAAGCT+TGG | 0.492744 | 1.4:+31192028 | None:intergenic |
| TAGCGACGATGCGGAGGATG+AGG | 0.492963 | 1.4:-31192708 | MS.gene064969:CDS |
| CTTACAACAAAACTTCCAAT+GGG | 0.493342 | 1.4:-31191560 | MS.gene064969:CDS |
| GGTGTTGCGAATTCATCTAA+TGG | 0.494038 | 1.4:+31187637 | None:intergenic |
| CGCCCTAGTTCATCTGCGGC+AGG | 0.495868 | 1.4:-31187523 | MS.gene064969:CDS |
| GTGAAAATGAATATAAGAAA+GGG | 0.496015 | 1.4:-31191697 | MS.gene064969:CDS |
| CTTGGGCAAAATGGTGTAGA+AGG | 0.496971 | 1.4:-31192744 | MS.gene064969:CDS |
| CTCTCTTCGCCTGACATGGA+TGG | 0.499410 | 1.4:+31187604 | None:intergenic |
| TTCTGTTGAGGTTGTTGCGA+GGG | 0.501310 | 1.4:-31191804 | MS.gene064969:CDS |
| CGGCAGGTTCCAGCAGTAGT+AGG | 0.509685 | 1.4:-31187507 | MS.gene064969:CDS |
| GCAGTGACCCAAGTATAATC+TGG | 0.510448 | 1.4:+31187451 | None:intergenic |
| TCTAAGGGCTGACATGACTT+TGG | 0.515499 | 1.4:-31192581 | MS.gene064969:CDS |
| CCGACAAGTCCATCCATGTC+AGG | 0.516227 | 1.4:-31187613 | MS.gene064969:CDS |
| GGGTGAGATTCGTACGGAAG+CGG | 0.516999 | 1.4:-31193016 | MS.gene064969:CDS |
| GTGAGCTTAAGAGGATACTT+GGG | 0.519970 | 1.4:-31193062 | MS.gene064969:CDS |
| TTTACCTAAGCTGTGTAATG+TGG | 0.520667 | 1.4:-31193037 | MS.gene064969:CDS |
| AATCTGGTGGAATTGCAAAC+GGG | 0.523683 | 1.4:+31187467 | None:intergenic |
| GCAGATGAACTAGGGCGGTA+TGG | 0.528840 | 1.4:+31187529 | None:intergenic |
| GCCTGGTATTGATGTTACTC+AGG | 0.530031 | 1.4:-31192344 | MS.gene064969:CDS |
| CTGAACAATGATAGTGATGA+GGG | 0.531253 | 1.4:-31192067 | MS.gene064969:CDS |
| TCATCGTCTGTCATAGCTCC+AGG | 0.531703 | 1.4:+31192202 | None:intergenic |
| AAAACAAATATATTTAGGCC+TGG | 0.531734 | 1.4:-31192361 | MS.gene064969:CDS |
| TAGCAGCAGAAGTCGTCATA+AGG | 0.532655 | 1.4:-31191729 | MS.gene064969:CDS |
| TCATGCAGAGTGATCCGGGC+TGG | 0.533564 | 1.4:+31192479 | None:intergenic |
| TGAAGAGGAGTATCACGATT+CGG | 0.534315 | 1.4:+31192931 | None:intergenic |
| TGGAGTTTGCAGAATGAACA+AGG | 0.535149 | 1.4:-31192847 | MS.gene064969:CDS |
| AATTAAGCATTATCAGCCCC+TGG | 0.539321 | 1.4:-31192767 | MS.gene064969:CDS |
| ACCTCAACAGAATGTCTCCC+TGG | 0.545970 | 1.4:+31191815 | None:intergenic |
| TTAACAGGAAAAGTTCCCAT+TGG | 0.546615 | 1.4:+31191545 | None:intergenic |
| AGGGCTCTCTTCGCCTGACA+TGG | 0.547387 | 1.4:+31187600 | None:intergenic |
| TTGCGAGGGGCGATGAGCAA+CGG | 0.548155 | 1.4:-31191790 | MS.gene064969:CDS |
| GAGATCATGCAGAGTGATCC+GGG | 0.550659 | 1.4:+31192475 | None:intergenic |
| GCGCCAGGAGAAAACAGAAA+TGG | 0.553288 | 1.4:-31192293 | MS.gene064969:CDS |
| CAAATCTTGTAAGTGTCTGA+AGG | 0.555543 | 1.4:+31192619 | None:intergenic |
| TTATGGTTGTTGGTGCAGAT+TGG | 0.558191 | 1.4:-31192867 | MS.gene064969:CDS |
| GGTAGGATCTTGGAAAGCTA+AGG | 0.558300 | 1.4:-31192272 | MS.gene064969:CDS |
| TCTGTTGAGGTTGTTGCGAG+GGG | 0.559260 | 1.4:-31191803 | MS.gene064969:CDS |
| TGTGCTGTTTAGGTATGGCA+GGG | 0.560479 | 1.4:-31193146 | None:intergenic |
| GAAAAGAAAGGATGGTTTGG+TGG | 0.562638 | 1.4:-31191965 | MS.gene064969:CDS |
| TTTGCAACAATGTCAAGCAA+TGG | 0.563437 | 1.4:+31191617 | None:intergenic |
| AACCTGCCGCAGATGAACTA+GGG | 0.564043 | 1.4:+31187521 | None:intergenic |
| TTCGGCGAAAGCCAAAGAAT+AGG | 0.565770 | 1.4:+31191668 | None:intergenic |
| ATAAGCAGGAAAAGAAAGGA+TGG | 0.566965 | 1.4:-31191973 | MS.gene064969:CDS |
| AGATGAAAGAAGGCAATTGG+AGG | 0.568053 | 1.4:-31192116 | MS.gene064969:CDS |
| GGTTCCCACCATCAGAGTAT+TGG | 0.574488 | 1.4:-31187689 | MS.gene064969:CDS |
| TCACTTGGCTGTTAAATTAG+GGG | 0.574791 | 1.4:-31192911 | MS.gene064969:CDS |
| AGTGACCAATACTCTGATGG+TGG | 0.577816 | 1.4:+31187684 | None:intergenic |
| TCACCCACATTACACAGCTT+AGG | 0.579319 | 1.4:+31193033 | None:intergenic |
| CGCATCGTCGCTACCAAACG+AGG | 0.579484 | 1.4:+31192718 | None:intergenic |
| CAATAGTGGAGAAAATAAGC+AGG | 0.586148 | 1.4:-31191987 | MS.gene064969:CDS |
| AGCAGAAGTCGTCATAAGGA+CGG | 0.588338 | 1.4:-31191725 | MS.gene064969:CDS |
| ATTCTGTTGAGGTTGTTGCG+AGG | 0.594319 | 1.4:-31191805 | MS.gene064969:CDS |
| TCGTGATACTCCTCTTCACT+TGG | 0.594632 | 1.4:-31192926 | MS.gene064969:CDS |
| GGTGCAATCCTTGAAATGAA+AGG | 0.596454 | 1.4:+31192640 | None:intergenic |
| GATGGTGGGAACCACCGGAA+TGG | 0.596988 | 1.4:+31187699 | None:intergenic |
| ATGAATATAAGAAAGGGTTG+AGG | 0.600251 | 1.4:-31191691 | MS.gene064969:CDS |
| TCAAGTAATCAGATTAAACC+AGG | 0.601287 | 1.4:-31191833 | MS.gene064969:CDS |
| CAGAGAAATTTGTCGCTGCA+GGG | 0.601633 | 1.4:+31187581 | None:intergenic |
| AATTTAACAGCCAAGTGAAG+AGG | 0.606406 | 1.4:+31192916 | None:intergenic |
| ACGCAAAGAGAACTTCTTGG+TGG | 0.607111 | 1.4:+31191893 | None:intergenic |
| AATTCCACCAGATTATACTT+GGG | 0.608111 | 1.4:-31187458 | MS.gene064969:CDS |
| GAAGATGGTAAAGTCCAGCC+CGG | 0.611600 | 1.4:-31192493 | MS.gene064969:CDS |
| GTTGTAAGTATAAAATCTAG+AGG | 0.612791 | 1.4:-31192229 | MS.gene064969:CDS |
| TGAAGAAGTTCAGCAAGAAG+TGG | 0.613255 | 1.4:-31192395 | MS.gene064969:CDS |
| ACCAGGGAGACATTCTGTTG+AGG | 0.613862 | 1.4:-31191816 | MS.gene064969:CDS |
| GAAAAGGGGTGCGAATCTAA+GGG | 0.614309 | 1.4:-31192596 | MS.gene064969:CDS |
| CTCGTTTGGTAGCGACGATG+CGG | 0.615725 | 1.4:-31192717 | MS.gene064969:CDS |
| AGCGACGATGCGGAGGATGA+GGG | 0.618744 | 1.4:-31192707 | MS.gene064969:CDS |
| ACTGAACAATGATAGTGATG+AGG | 0.620972 | 1.4:-31192068 | MS.gene064969:CDS |
| CGAGGGGCGATGAGCAACGG+AGG | 0.623050 | 1.4:-31191787 | MS.gene064969:CDS |
| TTACCTAAGCTGTGTAATGT+GGG | 0.623380 | 1.4:-31193036 | MS.gene064969:CDS |
| GTTTGGTAGCGACGATGCGG+AGG | 0.629098 | 1.4:-31192714 | MS.gene064969:CDS |
| GTGACCCAAGTATAATCTGG+TGG | 0.630524 | 1.4:+31187454 | None:intergenic |
| GCCTGAGTAACATCAATACC+AGG | 0.632873 | 1.4:+31192343 | None:intergenic |
| GTGACCAATACTCTGATGGT+GGG | 0.634458 | 1.4:+31187685 | None:intergenic |
| CAGGAGAAAACAGAAATGGT+AGG | 0.637085 | 1.4:-31192289 | MS.gene064969:CDS |
| TATTCAGGTTGCCATTCCGG+TGG | 0.638406 | 1.4:-31187710 | MS.gene064969:intron |
| GTTTGCAGAATGAACAAGGG+TGG | 0.641695 | 1.4:-31192843 | MS.gene064969:CDS |
| TGAGCTTAAGAGGATACTTG+GGG | 0.641820 | 1.4:-31193061 | MS.gene064969:CDS |
| ATTCCTATTGAAGATGGTAA+CGG | 0.643760 | 1.4:-31192013 | MS.gene064969:CDS |
| ACTTACAAGATTTGGAAAAG+GGG | 0.652824 | 1.4:-31192610 | MS.gene064969:CDS |
| TGGCGCCTCCAAGTCAACTG+AGG | 0.653180 | 1.4:+31192310 | None:intergenic |
| GATCTCACACAAGGAAAAGG+AGG | 0.660308 | 1.4:-31192458 | MS.gene064969:CDS |
| TGTTAAATTAGGGGATGAAG+TGG | 0.665433 | 1.4:-31192902 | MS.gene064969:CDS |
| AAAAGTGACCAATACTCTGA+TGG | 0.668899 | 1.4:+31187681 | None:intergenic |
| TAATGTGGGTGAGATTCGTA+CGG | 0.669654 | 1.4:-31193022 | MS.gene064969:CDS |
| GACATGGATGGACTTGTCGG+CGG | 0.681897 | 1.4:+31187616 | None:intergenic |
| GGAGTTTGCAGAATGAACAA+GGG | 0.699547 | 1.4:-31192846 | MS.gene064969:CDS |
| CAAGTAATCAGATTAAACCA+GGG | 0.700115 | 1.4:-31191832 | MS.gene064969:CDS |
| ATACCGCCCTAGTTCATCTG+CGG | 0.706707 | 1.4:-31187527 | MS.gene064969:CDS |
| GAGCTTAAGAGGATACTTGG+GGG | 0.708775 | 1.4:-31193060 | MS.gene064969:CDS |
| TGAACAATGATAGTGATGAG+GGG | 0.712496 | 1.4:-31192066 | MS.gene064969:CDS |
| CTGCCGCAGATGAACTAGGG+CGG | 0.715429 | 1.4:+31187524 | None:intergenic |
| ACTCTGCATGATCTCACACA+AGG | 0.718060 | 1.4:-31192467 | MS.gene064969:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTCCAAAATTAT+AGG | + | chr1.4:31192148-31192167 | None:intergenic | 10.0% |
| !! | AAAAAAATTCCAAAATTATA+GGG | + | chr1.4:31192147-31192166 | None:intergenic | 10.0% |
| !! | AAAACATATAATTAATTACA+AGG | + | chr1.4:31191389-31191408 | None:intergenic | 10.0% |
| !! | AAACATATAATTAATTACAA+GGG | + | chr1.4:31191388-31191407 | None:intergenic | 10.0% |
| !! | CTTGAATTAAAAAAAAAATA+CGG | - | chr1.4:31191562-31191581 | MS.gene064969:CDS | 10.0% |
| !!! | TCATTTTATCAAATTATTAT+CGG | + | chr1.4:31189202-31189221 | None:intergenic | 10.0% |
| !!! | TTTTTATTGCTTTAAATAAT+TGG | - | chr1.4:31190615-31190634 | MS.gene064969:intron | 10.0% |
| !! | ATAAAAATTAATAATCCCAT+AGG | + | chr1.4:31190072-31190091 | None:intergenic | 15.0% |
| !! | ATCATTGACATAAATAAATT+TGG | + | chr1.4:31192323-31192342 | None:intergenic | 15.0% |
| !! | GAATTCAATTAAAAAAATCA+TGG | - | chr1.4:31191536-31191555 | MS.gene064969:intron | 15.0% |
| !! | TAAAAATTAATAATCCCATA+GGG | + | chr1.4:31190071-31190090 | None:intergenic | 15.0% |
| !! | TCATTGACATAAATAAATTT+GGG | + | chr1.4:31192322-31192341 | None:intergenic | 15.0% |
| !!! | ATTTTATCAAATTATTATCG+GGG | + | chr1.4:31189200-31189219 | None:intergenic | 15.0% |
| !!! | CATTTTATCAAATTATTATC+GGG | + | chr1.4:31189201-31189220 | None:intergenic | 15.0% |
| !!! | TCTAATTAGTTTGAATTTTA+TGG | - | chr1.4:31189831-31189850 | MS.gene064969:intron | 15.0% |
| !!! | TGTCTAAAACAAATATATTT+AGG | - | chr1.4:31188150-31188169 | MS.gene064969:intron | 15.0% |
| !!! | TTATTTTTATCCTTAGTTTT+TGG | + | chr1.4:31191936-31191955 | None:intergenic | 15.0% |
| !!! | TTTTAATTCAGACAATATTA+TGG | + | chr1.4:31190186-31190205 | None:intergenic | 15.0% |
| !!! | TTTTGTTTCTTTTGTATATT+TGG | - | chr1.4:31190097-31190116 | MS.gene064969:intron | 15.0% |
| !! | AAAAATTAATAATCCCATAG+GGG | + | chr1.4:31190070-31190089 | None:intergenic | 20.0% |
| !! | AATTTGAAAAGAAATGAAAC+AGG | + | chr1.4:31191662-31191681 | None:intergenic | 20.0% |
| !! | ACAAAAATTTAGGTAATAAG+TGG | + | chr1.4:31190250-31190269 | None:intergenic | 20.0% |
| !! | ACCACATTAAAAAAATTCAT+CGG | + | chr1.4:31192637-31192656 | None:intergenic | 20.0% |
| !! | ACTAAGGATAAAAATAACAA+AGG | - | chr1.4:31191939-31191958 | MS.gene064969:CDS | 20.0% |
| !! | ACTGTTATATCTTTCTTTAT+AGG | - | chr1.4:31192755-31192774 | MS.gene064969:CDS | 20.0% |
| !! | AGAGATATACATTAAATCTT+AGG | + | chr1.4:31192091-31192110 | None:intergenic | 20.0% |
| !! | ATAATGCTTAATTATGATCT+TGG | + | chr1.4:31187742-31187761 | None:intergenic | 20.0% |
| !! | ATGAATTATAAGTTACAATG+TGG | + | chr1.4:31190848-31190867 | None:intergenic | 20.0% |
| !! | ATGTGTAGTATTTATCTTTA+TGG | + | chr1.4:31192293-31192312 | None:intergenic | 20.0% |
| !! | CAAACAAAAAATTAAGTAGA+TGG | - | chr1.4:31191716-31191735 | MS.gene064969:CDS | 20.0% |
| !! | CAAAGATTCTATTAATTATG+CGG | + | chr1.4:31191133-31191152 | None:intergenic | 20.0% |
| !! | CAATACTAAATACAAATGTA+GGG | + | chr1.4:31189928-31189947 | None:intergenic | 20.0% |
| !! | CTAAGGATAAAAATAACAAA+GGG | - | chr1.4:31191940-31191959 | MS.gene064969:CDS | 20.0% |
| !! | GAATATAATTGATCATGTTT+CGG | - | chr1.4:31189230-31189249 | MS.gene064969:intron | 20.0% |
| !! | GTGAAAATGAATATAAGAAA+GGG | - | chr1.4:31188819-31188838 | MS.gene064969:intron | 20.0% |
| !! | TGGTAAAATAGATAAAAAGA+TGG | + | chr1.4:31192273-31192292 | None:intergenic | 20.0% |
| !! | TTATAAGATAGATATCTCTA+GGG | - | chr1.4:31190366-31190385 | MS.gene064969:intron | 20.0% |
| !! | TTCAAACTAATTAGATGAAA+TGG | + | chr1.4:31189826-31189845 | None:intergenic | 20.0% |
| !! | TTCTATCCAATCATAATTAA+TGG | + | chr1.4:31189971-31189990 | None:intergenic | 20.0% |
| !! | TTTAAATTATCCTTTCCTAT+TGG | - | chr1.4:31191988-31192007 | MS.gene064969:CDS | 20.0% |
| !! | TTTATAAGATAGATATCTCT+AGG | - | chr1.4:31190365-31190384 | MS.gene064969:intron | 20.0% |
| !!! | AAGAGTTCTTCAATTTTTAA+TGG | + | chr1.4:31188878-31188897 | None:intergenic | 20.0% |
| !!! | AGATTTAATCCCTATAATTT+TGG | - | chr1.4:31192135-31192154 | MS.gene064969:CDS | 20.0% |
| !!! | ATTTTAATGCTAATCATGAT+AGG | - | chr1.4:31191896-31191915 | MS.gene064969:CDS | 20.0% |
| !!! | GCTAAAAATATGAATTTTCT+GGG | - | chr1.4:31189030-31189049 | MS.gene064969:intron | 20.0% |
| !!! | TCAATTTTTAATGGAAAGTT+CGG | + | chr1.4:31188869-31188888 | None:intergenic | 20.0% |
| !!! | TTTTGTATATTTGGATACAA+GGG | - | chr1.4:31190106-31190125 | MS.gene064969:intron | 20.0% |
| ! | AAAACAAAACTCAATCACAA+AGG | + | chr1.4:31191012-31191031 | None:intergenic | 25.0% |
| ! | AAAACAAATATATTTAGGCC+TGG | - | chr1.4:31188155-31188174 | MS.gene064969:intron | 25.0% |
| ! | AAACTAATTAGATGAAATGG+AGG | + | chr1.4:31189823-31189842 | None:intergenic | 25.0% |
| ! | AATAAGTAGACTTGAGAATA+AGG | + | chr1.4:31192240-31192259 | None:intergenic | 25.0% |
| ! | AATGTGATAAATAGAAGAGA+TGG | - | chr1.4:31191782-31191801 | MS.gene064969:CDS | 25.0% |
| ! | AATTCTGTAATTGAAGAAGA+CGG | + | chr1.4:31191521-31191540 | None:intergenic | 25.0% |
| ! | AGAAGAACAAATCAAAGAAA+GGG | - | chr1.4:31193114-31193133 | MS.gene064969:CDS | 25.0% |
| ! | AGAGATATATACATGAACAT+AGG | + | chr1.4:31191171-31191190 | None:intergenic | 25.0% |
| ! | AGTGAAAAAACCAAAAAAGA+TGG | + | chr1.4:31192687-31192706 | None:intergenic | 25.0% |
| ! | ATATGATATAAAACCGGATA+AGG | - | chr1.4:31191257-31191276 | MS.gene064969:intron | 25.0% |
| ! | ATGTGGTATTAATTGAATAG+AGG | + | chr1.4:31190831-31190850 | None:intergenic | 25.0% |
| ! | CAAAAAAAAACAATACGATG+AGG | - | chr1.4:31189527-31189546 | MS.gene064969:intron | 25.0% |
| ! | CACCACATTAAAAAATTCAT+CGG | + | chr1.4:31192722-31192741 | None:intergenic | 25.0% |
| ! | CACTTTCCATTAATTATGAT+TGG | - | chr1.4:31189962-31189981 | MS.gene064969:intron | 25.0% |
| ! | CGTGAAAATGAATATAAGAA+AGG | - | chr1.4:31188818-31188837 | MS.gene064969:intron | 25.0% |
| ! | CTCTCTATTTAAGCTTATTA+AGG | + | chr1.4:31189865-31189884 | None:intergenic | 25.0% |
| ! | GAGATATATACATGAACATA+GGG | + | chr1.4:31191170-31191189 | None:intergenic | 25.0% |
| ! | GATAGGATATGATATAAAAC+CGG | - | chr1.4:31191251-31191270 | MS.gene064969:intron | 25.0% |
| ! | GCAATACTAAATACAAATGT+AGG | + | chr1.4:31189929-31189948 | None:intergenic | 25.0% |
| ! | GGAAAAAAAAAGTGATTGTA+GGG | - | chr1.4:31191737-31191756 | MS.gene064969:CDS | 25.0% |
| ! | GTATGTAATTAGGTAGATAT+AGG | - | chr1.4:31191194-31191213 | MS.gene064969:intron | 25.0% |
| ! | GTCTACAAATCATCATTATT+CGG | - | chr1.4:31189633-31189652 | MS.gene064969:intron | 25.0% |
| ! | GTTGTAAGTATAAAATCTAG+AGG | - | chr1.4:31188287-31188306 | MS.gene064969:intron | 25.0% |
| ! | TAATTAATGGAAAGTGAAAC+AGG | + | chr1.4:31189958-31189977 | None:intergenic | 25.0% |
| ! | TAGAGGATATTATTACACAT+TGG | + | chr1.4:31190689-31190708 | None:intergenic | 25.0% |
| ! | TATCTCTGATGTATGTAATT+AGG | - | chr1.4:31191184-31191203 | MS.gene064969:intron | 25.0% |
| ! | TGATGAAGCAACAAAAATTT+AGG | + | chr1.4:31190260-31190279 | None:intergenic | 25.0% |
| ! | TGATGCTATTAGATAGATAT+AGG | - | chr1.4:31192110-31192129 | MS.gene064969:CDS | 25.0% |
| ! | TGGAAAAAAAAAGTGATTGT+AGG | - | chr1.4:31191736-31191755 | MS.gene064969:CDS | 25.0% |
| ! | TGTGTAATAATATCCTCTAA+AGG | - | chr1.4:31190690-31190709 | MS.gene064969:intron | 25.0% |
| !! | AATCATCTTCCTTTTTCTTA+GGG | - | chr1.4:31191492-31191511 | MS.gene064969:intron | 25.0% |
| !! | ATCCTTTTACCTTATCAAAA+TGG | - | chr1.4:31189990-31190009 | MS.gene064969:intron | 25.0% |
| !! | CGCTAAAAATATGAATTTTC+TGG | - | chr1.4:31189029-31189048 | MS.gene064969:intron | 25.0% |
| !! | CTTTTGTATATTTGGATACA+AGG | - | chr1.4:31190105-31190124 | MS.gene064969:intron | 25.0% |
| !! | TCCTTTTACCTTATCAAAAT+GGG | - | chr1.4:31189991-31190010 | MS.gene064969:intron | 25.0% |
| !! | TTTAGTTTAGCACAAAAGAT+TGG | - | chr1.4:31192484-31192503 | MS.gene064969:CDS | 25.0% |
| !!! | AATTTTTTTAATGTGGTGGA+GGG | - | chr1.4:31192640-31192659 | MS.gene064969:CDS | 25.0% |
| !!! | GATGAATTTTTTTAATGTGG+TGG | - | chr1.4:31192636-31192655 | MS.gene064969:CDS | 25.0% |
| !!! | TCCGATGAATTTTTTTAATG+TGG | - | chr1.4:31192633-31192652 | MS.gene064969:CDS | 25.0% |
| !!! | TTCCGATGAATTTTTTAATG+TGG | - | chr1.4:31192717-31192736 | MS.gene064969:CDS | 25.0% |
| !!! | TTTTATCCTTAGTTTTTGGT+GGG | + | chr1.4:31191932-31191951 | None:intergenic | 25.0% |
| !!! | TTTTTATCCTTAGTTTTTGG+TGG | + | chr1.4:31191933-31191952 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGCTTCATCATAT+TGG | - | chr1.4:31190263-31190282 | MS.gene064969:intron | 25.0% |
| AAAAAAAAGTGATTGTAGGG+TGG | - | chr1.4:31191740-31191759 | MS.gene064969:CDS | 30.0% | |
| AAAAATAACAAAGGGTGAGT+AGG | - | chr1.4:31191948-31191967 | MS.gene064969:CDS | 30.0% | |
| AATTCCACCAGATTATACTT+GGG | - | chr1.4:31193058-31193077 | MS.gene064969:CDS | 30.0% | |
| ACACTTACAAGATTTGGAAA+AGG | - | chr1.4:31187904-31187923 | MS.gene064969:intron | 30.0% | |
| ACCTATAGTTGAGAAATGAA+AGG | + | chr1.4:31190891-31190910 | None:intergenic | 30.0% | |
| ACCTTTCATTTCTCAACTAT+AGG | - | chr1.4:31190887-31190906 | MS.gene064969:intron | 30.0% | |
| ACTTACAACAAAACTTCCAA+TGG | - | chr1.4:31188955-31188974 | MS.gene064969:intron | 30.0% | |
| ACTTACAAGATTTGGAAAAG+GGG | - | chr1.4:31187906-31187925 | MS.gene064969:intron | 30.0% | |
| AGAATTTACAGAAGAAGCTT+TGG | + | chr1.4:31188765-31188784 | None:intergenic | 30.0% | |
| AGTAGGATAGGATTAGAAAT+AGG | - | chr1.4:31191965-31191984 | MS.gene064969:CDS | 30.0% | |
| ATGAATATAAGAAAGGGTTG+AGG | - | chr1.4:31188825-31188844 | MS.gene064969:intron | 30.0% | |
| ATTACTCTTTCTGCATATTC+AGG | - | chr1.4:31192791-31192810 | MS.gene064969:CDS | 30.0% | |
| ATTAGGTAGATATAGGCTAA+CGG | - | chr1.4:31191201-31191220 | MS.gene064969:intron | 30.0% | |
| ATTATTACACATTGGTACTC+TGG | + | chr1.4:31190681-31190700 | None:intergenic | 30.0% | |
| ATTCCTATTGAAGATGGTAA+CGG | - | chr1.4:31188503-31188522 | MS.gene064969:intron | 30.0% | |
| CAAGTAATCAGATTAAACCA+GGG | - | chr1.4:31188684-31188703 | MS.gene064969:intron | 30.0% | |
| CACTTACAAGATTTGGAAAA+GGG | - | chr1.4:31187905-31187924 | MS.gene064969:intron | 30.0% | |
| CCATATAATATCACCTTTAG+AGG | + | chr1.4:31190706-31190725 | None:intergenic | 30.0% | |
| CTTACAACAAAACTTCCAAT+GGG | - | chr1.4:31188956-31188975 | MS.gene064969:intron | 30.0% | |
| GAAAAGGATAGGTAAATACA+TGG | + | chr1.4:31190327-31190346 | None:intergenic | 30.0% | |
| GAAAATAAGCAGGAAAAGAA+AGG | - | chr1.4:31188539-31188558 | MS.gene064969:intron | 30.0% | |
| GAGAAGAACAAATCAAAGAA+AGG | - | chr1.4:31193113-31193132 | MS.gene064969:CDS | 30.0% | |
| GAGAAGATAACAATACTATG+AGG | - | chr1.4:31189390-31189409 | MS.gene064969:intron | 30.0% | |
| GGTTTAATCTGATTACTTGA+AGG | + | chr1.4:31188683-31188702 | None:intergenic | 30.0% | |
| TCAAGTAATCAGATTAAACC+AGG | - | chr1.4:31188683-31188702 | MS.gene064969:intron | 30.0% | |
| TCAATGATCAGAAACTTTGT+TGG | - | chr1.4:31192335-31192354 | MS.gene064969:CDS | 30.0% | |
| TGAAAAGAAATGAAACAGGT+TGG | + | chr1.4:31191658-31191677 | None:intergenic | 30.0% | |
| TTCACTTGGCTGTTAAATTA+GGG | - | chr1.4:31187604-31187623 | MS.gene064969:CDS | 30.0% | |
| TTCTATTAATTATGCGGCAA+AGG | + | chr1.4:31191127-31191146 | None:intergenic | 30.0% | |
| TTGAGAGAAAGGGTAAAATA+AGG | - | chr1.4:31191873-31191892 | MS.gene064969:CDS | 30.0% | |
| TTTCAGAAGAAGAAAAGGAT+AGG | + | chr1.4:31190338-31190357 | None:intergenic | 30.0% | |
| ! | AGTTGTTTCAGAAGAAGAAA+AGG | + | chr1.4:31190343-31190362 | None:intergenic | 30.0% |
| ! | ATAAAGGAGTGTGCTTTAAA+AGG | - | chr1.4:31190447-31190466 | MS.gene064969:intron | 30.0% |
| ! | ATACTAATTTCTAGAGAACC+TGG | + | chr1.4:31192371-31192390 | None:intergenic | 30.0% |
| ! | ATCATCTTCCTTTTTCTTAG+GGG | - | chr1.4:31191493-31191512 | MS.gene064969:intron | 30.0% |
| ! | CAATCATCTTCCTTTTTCTT+AGG | - | chr1.4:31191491-31191510 | MS.gene064969:intron | 30.0% |
| ! | CCTCTAAAGGTGATATTATA+TGG | - | chr1.4:31190703-31190722 | MS.gene064969:intron | 30.0% |
| ! | GTAACAAGCAAGAGTATAAT+TGG | + | chr1.4:31189107-31189126 | None:intergenic | 30.0% |
| ! | TAGCTTGAATTATTAGCTCT+AGG | + | chr1.4:31192204-31192223 | None:intergenic | 30.0% |
| ! | TAGTGGACAAATGAATATTC+TGG | + | chr1.4:31190152-31190171 | None:intergenic | 30.0% |
| ! | TTGTAGCACCAATGTTTTAT+GGG | - | chr1.4:31189745-31189764 | MS.gene064969:intron | 30.0% |
| !! | GATCAAAGTGTTCTTTTTCT+TGG | - | chr1.4:31187990-31188009 | MS.gene064969:intron | 30.0% |
| !! | GTGAGTTCTTTTTCACATAA+AGG | - | chr1.4:31190431-31190450 | MS.gene064969:intron | 30.0% |
| !! | TCCCATTTTGATAAGGTAAA+AGG | + | chr1.4:31189995-31190014 | None:intergenic | 30.0% |
| !!! | CGATGAATTTTTTAATGTGG+TGG | - | chr1.4:31192720-31192739 | MS.gene064969:CDS | 30.0% |
| !!! | CTACGTATTAGTTTTGCTTT+AGG | - | chr1.4:31190936-31190955 | MS.gene064969:intron | 30.0% |
| !!! | GAATTTTTTAATGTGGTGGA+GGG | - | chr1.4:31192724-31192743 | MS.gene064969:CDS | 30.0% |
| !!! | GAATTTTTTTAATGTGGTGG+AGG | - | chr1.4:31192639-31192658 | MS.gene064969:CDS | 30.0% |
| !!! | TGAATTTTTTAATGTGGTGG+AGG | - | chr1.4:31192723-31192742 | MS.gene064969:CDS | 30.0% |
| AAAAGTGACCAATACTCTGA+TGG | + | chr1.4:31192838-31192857 | None:intergenic | 35.0% | |
| AAACAAGAAACAGCAGGAAA+AGG | + | chr1.4:31190290-31190309 | None:intergenic | 35.0% | |
| AAACAGAAATGGTAGGATCT+TGG | - | chr1.4:31188234-31188253 | MS.gene064969:intron | 35.0% | |
| AAAGTAACTCCACACATATC+AGG | + | chr1.4:31192570-31192589 | None:intergenic | 35.0% | |
| AAATCCTTCCTACACATTCT+AGG | - | chr1.4:31190973-31190992 | MS.gene064969:intron | 35.0% | |
| AAGAAATAGACAGAGAAGAG+GGG | - | chr1.4:31189362-31189381 | MS.gene064969:intron | 35.0% | |
| AATACTATGAGGAAACCCAT+AGG | - | chr1.4:31189401-31189420 | MS.gene064969:intron | 35.0% | |
| AATCCTTCCTACACATTCTA+GGG | - | chr1.4:31190974-31190993 | MS.gene064969:intron | 35.0% | |
| AATGTTTCAAGCGCTATTCA+TGG | + | chr1.4:31189800-31189819 | None:intergenic | 35.0% | |
| AATTTAACAGCCAAGTGAAG+AGG | + | chr1.4:31187603-31187622 | None:intergenic | 35.0% | |
| ACAGTAGATTGAAACAGGAT+AGG | - | chr1.4:31192019-31192038 | MS.gene064969:CDS | 35.0% | |
| ACCAAACAGTAGATTGAAAC+AGG | - | chr1.4:31192014-31192033 | MS.gene064969:CDS | 35.0% | |
| AGACAATATTATGGAGCAAG+AGG | + | chr1.4:31190177-31190196 | None:intergenic | 35.0% | |
| AGAGACATTCCTATTGAAGA+TGG | - | chr1.4:31188497-31188516 | MS.gene064969:intron | 35.0% | |
| ATAAAATCTAGAGGAGTTCC+TGG | - | chr1.4:31188296-31188315 | MS.gene064969:intron | 35.0% | |
| ATAAGCAGGAAAAGAAAGGA+TGG | - | chr1.4:31188543-31188562 | MS.gene064969:intron | 35.0% | |
| ATATAAAACCGGATAAGGAC+AGG | - | chr1.4:31191262-31191281 | MS.gene064969:intron | 35.0% | |
| ATATCATGCATGTCATGTGT+TGG | - | chr1.4:31189299-31189318 | MS.gene064969:intron | 35.0% | |
| ATCATATCTTGTGCACCAAA+CGG | + | chr1.4:31191228-31191247 | None:intergenic | 35.0% | |
| ATCGTTAAGTTCTTCACTCT+CGG | + | chr1.4:31188369-31188388 | None:intergenic | 35.0% | |
| ATCTAGTTAATGACCCCTAT+GGG | - | chr1.4:31190054-31190073 | MS.gene064969:intron | 35.0% | |
| ATCTTGGTTTCAGTGGATAA+AGG | - | chr1.4:31192962-31192981 | MS.gene064969:CDS | 35.0% | |
| CAAATCTTGTAAGTGTCTGA+AGG | + | chr1.4:31187900-31187919 | None:intergenic | 35.0% | |
| CAAATTTCTCTGCTTCATCT+TGG | - | chr1.4:31192946-31192965 | MS.gene064969:CDS | 35.0% | |
| CAAGAAATAGACAGAGAAGA+GGG | - | chr1.4:31189361-31189380 | MS.gene064969:intron | 35.0% | |
| CAATTCCACCAGATTATACT+TGG | - | chr1.4:31193057-31193076 | MS.gene064969:CDS | 35.0% | |
| CAATTGCCTTCTTTCATCTT+CGG | + | chr1.4:31188399-31188418 | None:intergenic | 35.0% | |
| CATGTTATGAAAAACCAGCA+TGG | - | chr1.4:31189147-31189166 | MS.gene064969:intron | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | + | chr1.4:31189501-31189520 | None:intergenic | 35.0% | |
| CTGACTTACTAAACCCTAAA+GGG | + | chr1.4:31191041-31191060 | None:intergenic | 35.0% | |
| CTGTGATACCTTTCATTTCA+AGG | - | chr1.4:31187868-31187887 | MS.gene064969:intron | 35.0% | |
| CTTCACTTGGCTGTTAAATT+AGG | - | chr1.4:31187603-31187622 | MS.gene064969:CDS | 35.0% | |
| CTTCAGACACTTACAAGATT+TGG | - | chr1.4:31187898-31187917 | MS.gene064969:intron | 35.0% | |
| GAAAAGGTGAGCGATTTATT+GGG | - | chr1.4:31188650-31188669 | MS.gene064969:intron | 35.0% | |
| GAACGATGAATTGAGAGAAA+GGG | - | chr1.4:31191863-31191882 | MS.gene064969:CDS | 35.0% | |
| GAGGAACATAATAGAAGAGT+AGG | - | chr1.4:31189546-31189565 | MS.gene064969:intron | 35.0% | |
| GCACAAGATATGATAGAGAT+AGG | - | chr1.4:31191234-31191253 | MS.gene064969:intron | 35.0% | |
| GCATAAGCTAAAAGTGGTAA+AGG | + | chr1.4:31189700-31189719 | None:intergenic | 35.0% | |
| GTGTGCATCAAACATGTAAT+AGG | + | chr1.4:31191316-31191335 | None:intergenic | 35.0% | |
| GTTTCCAAATCAAAGTGACA+CGG | + | chr1.4:31190654-31190673 | None:intergenic | 35.0% | |
| TAATCTGGTGGAATTGCAAA+CGG | + | chr1.4:31193053-31193072 | None:intergenic | 35.0% | |
| TAATGCAAACAAGAAACAGC+AGG | + | chr1.4:31190296-31190315 | None:intergenic | 35.0% | |
| TAGAAAACCCTAGAATGTGT+AGG | + | chr1.4:31190984-31191003 | None:intergenic | 35.0% | |
| TATCTAGTTAATGACCCCTA+TGG | - | chr1.4:31190053-31190072 | MS.gene064969:intron | 35.0% | |
| TCACTTGGCTGTTAAATTAG+GGG | - | chr1.4:31187605-31187624 | MS.gene064969:CDS | 35.0% | |
| TCCTGTTTCAATCTACTGTT+TGG | + | chr1.4:31192018-31192037 | None:intergenic | 35.0% | |
| TGAAAAGGTGAGCGATTTAT+TGG | - | chr1.4:31188649-31188668 | MS.gene064969:intron | 35.0% | |
| TGAACGATGAATTGAGAGAA+AGG | - | chr1.4:31191862-31191881 | MS.gene064969:CDS | 35.0% | |
| TGTTAAATTAGGGGATGAAG+TGG | - | chr1.4:31187614-31187633 | MS.gene064969:CDS | 35.0% | |
| TTAACAGGAAAAGTTCCCAT+TGG | + | chr1.4:31188974-31188993 | None:intergenic | 35.0% | |
| TTACCTAAGCTGTGTAATGT+GGG | - | chr1.4:31187480-31187499 | MS.gene064969:CDS | 35.0% | |
| TTAGGTAATAAGTGGAAGAG+TGG | + | chr1.4:31190242-31190261 | None:intergenic | 35.0% | |
| TTCTAACCCACCAAAAACTA+AGG | - | chr1.4:31191923-31191942 | MS.gene064969:CDS | 35.0% | |
| TTCTCTTTGCGTAGATGAAA+AGG | - | chr1.4:31188634-31188653 | MS.gene064969:intron | 35.0% | |
| TTTACCTAAGCTGTGTAATG+TGG | - | chr1.4:31187479-31187498 | MS.gene064969:CDS | 35.0% | |
| TTTGCAACAATGTCAAGCAA+TGG | + | chr1.4:31188902-31188921 | None:intergenic | 35.0% | |
| ! | AAAATCACAGCCTTATGAAC+AGG | + | chr1.4:31187423-31187442 | None:intergenic | 35.0% |
| ! | AATGGGAACTTTTCCTGTTA+AGG | - | chr1.4:31188973-31188992 | MS.gene064969:intron | 35.0% |
| ! | ACCAATGTTTTATGGGTATG+CGG | - | chr1.4:31189752-31189771 | MS.gene064969:intron | 35.0% |
| ! | ACTGAACAATGATAGTGATG+AGG | - | chr1.4:31188448-31188467 | MS.gene064969:intron | 35.0% |
| ! | AGGAACGAGGTTTAATTTCA+AGG | + | chr1.4:31192537-31192556 | None:intergenic | 35.0% |
| ! | AGTGTTCTTTTTCTTGGTGA+TGG | - | chr1.4:31187996-31188015 | MS.gene064969:intron | 35.0% |
| ! | AGTTATGGAGGAAGAAGTAT+AGG | - | chr1.4:31191813-31191832 | MS.gene064969:CDS | 35.0% |
| ! | ATTTGGAACATGTGGGTAAA+AGG | - | chr1.4:31189329-31189348 | MS.gene064969:intron | 35.0% |
| ! | ATTTTCTATCCTACTACTGC+TGG | + | chr1.4:31193021-31193040 | None:intergenic | 35.0% |
| ! | CAATAGTGGAGAAAATAAGC+AGG | - | chr1.4:31188529-31188548 | MS.gene064969:intron | 35.0% |
| ! | CTGAACAATGATAGTGATGA+GGG | - | chr1.4:31188449-31188468 | MS.gene064969:intron | 35.0% |
| ! | CTTGTAGCACCAATGTTTTA+TGG | - | chr1.4:31189744-31189763 | MS.gene064969:intron | 35.0% |
| ! | GATGTATGTGAAGAGTATGA+TGG | + | chr1.4:31192421-31192440 | None:intergenic | 35.0% |
| ! | TCATAAGGCTGTGATTTTGA+AGG | - | chr1.4:31187425-31187444 | MS.gene064969:CDS | 35.0% |
| ! | TGAACAATGATAGTGATGAG+GGG | - | chr1.4:31188450-31188469 | MS.gene064969:intron | 35.0% |
| ! | TGGTGGACAAATGAATATTC+TGG | + | chr1.4:31190222-31190241 | None:intergenic | 35.0% |
| ! | TTTGGAACATGTGGGTAAAA+GGG | - | chr1.4:31189330-31189349 | MS.gene064969:intron | 35.0% |
| ! | TTTTGACCGAAGATGAAAGA+AGG | - | chr1.4:31188390-31188409 | MS.gene064969:intron | 35.0% |
| !! | AAAACATTGGTGCTACAAGT+TGG | + | chr1.4:31189743-31189762 | None:intergenic | 35.0% |
| !! | AAACATTGGTGCTACAAGTT+GGG | + | chr1.4:31189742-31189761 | None:intergenic | 35.0% |
| !! | ATAGGAATGTCTCTAAAGCT+TGG | + | chr1.4:31188491-31188510 | None:intergenic | 35.0% |
| !! | GCTGTGATTTTGAAGGATTA+TGG | - | chr1.4:31187432-31187451 | MS.gene064969:CDS | 35.0% |
| !! | TGCAATCTCCCATTTTGATA+AGG | + | chr1.4:31190002-31190021 | None:intergenic | 35.0% |
| !! | TTCGATTTTAGAGGAAGAGA+AGG | - | chr1.4:31187524-31187543 | MS.gene064969:CDS | 35.0% |
| AAACCCTAGAATGTGTAGGA+AGG | + | chr1.4:31190980-31190999 | None:intergenic | 40.0% | |
| AACCAAAAGTTGCGAGTGAA+TGG | - | chr1.4:31190552-31190571 | MS.gene064969:intron | 40.0% | |
| AAGCTAGCCCAAAGAATTGA+AGG | + | chr1.4:31192452-31192471 | None:intergenic | 40.0% | |
| AAGTGATTGTAGGGTGGAAT+TGG | - | chr1.4:31191746-31191765 | MS.gene064969:CDS | 40.0% | |
| AATCTGGTGGAATTGCAAAC+GGG | + | chr1.4:31193052-31193071 | None:intergenic | 40.0% | |
| AATTAAGCATTATCAGCCCC+TGG | - | chr1.4:31187749-31187768 | MS.gene064969:intron | 40.0% | |
| ACATATCAGGCATGTTTCGA+AGG | + | chr1.4:31192557-31192576 | None:intergenic | 40.0% | |
| ACCGCATACCCATAAAACAT+TGG | + | chr1.4:31189756-31189775 | None:intergenic | 40.0% | |
| ACTTACTAAACCCTAAAGGG+TGG | + | chr1.4:31191038-31191057 | None:intergenic | 40.0% | |
| AGATGAAAGAAGGCAATTGG+AGG | - | chr1.4:31188400-31188419 | MS.gene064969:intron | 40.0% | |
| AGCTAAAAGTGGTAAAGGTG+AGG | + | chr1.4:31189695-31189714 | None:intergenic | 40.0% | |
| AGGATTATGGTGAGCTTAAG+AGG | - | chr1.4:31187445-31187464 | MS.gene064969:CDS | 40.0% | |
| AGTGATTGTAGGGTGGAATT+GGG | - | chr1.4:31191747-31191766 | MS.gene064969:CDS | 40.0% | |
| ATGCATGCTACAGCATAAGT+AGG | + | chr1.4:31189130-31189149 | None:intergenic | 40.0% | |
| ATTAAATCTTAGGCCCCGTT+TGG | + | chr1.4:31192081-31192100 | None:intergenic | 40.0% | |
| CAATCTCTGCTGTGATTGAT+AGG | - | chr1.4:31187553-31187572 | MS.gene064969:CDS | 40.0% | |
| CAGGAAAAGAAAGGATGGTT+TGG | - | chr1.4:31188548-31188567 | MS.gene064969:intron | 40.0% | |
| CAGGAGAAAACAGAAATGGT+AGG | - | chr1.4:31188227-31188246 | MS.gene064969:intron | 40.0% | |
| CATGATCTCACACAAGGAAA+AGG | - | chr1.4:31188055-31188074 | MS.gene064969:intron | 40.0% | |
| CCTGACTTACTAAACCCTAA+AGG | + | chr1.4:31191042-31191061 | None:intergenic | 40.0% | |
| CCTGTGTCCTTCAATTCTTT+GGG | - | chr1.4:31192442-31192461 | MS.gene064969:CDS | 40.0% | |
| CGAAGATGAAAGAAGGCAAT+TGG | - | chr1.4:31188397-31188416 | MS.gene064969:intron | 40.0% | |
| CTACATCTACTTACCTTTCC+TGG | - | chr1.4:31190728-31190747 | MS.gene064969:intron | 40.0% | |
| CTACCGTTACCATCTTCAAT+AGG | + | chr1.4:31188509-31188528 | None:intergenic | 40.0% | |
| GAAGCTAATGAATCCAGGAA+AGG | + | chr1.4:31190744-31190763 | None:intergenic | 40.0% | |
| GCAAGAAATAGACAGAGAAG+AGG | - | chr1.4:31189360-31189379 | MS.gene064969:intron | 40.0% | |
| GCTGAAATGCTTATGGTTGT+TGG | - | chr1.4:31187639-31187658 | MS.gene064969:CDS | 40.0% | |
| GGAGTTTGCAGAATGAACAA+GGG | - | chr1.4:31187670-31187689 | MS.gene064969:CDS | 40.0% | |
| GGGATTGATGTTGCAAAGTT+TGG | - | chr1.4:31187390-31187409 | MS.gene064969:CDS | 40.0% | |
| GGTGCAATCCTTGAAATGAA+AGG | + | chr1.4:31187879-31187898 | None:intergenic | 40.0% | |
| GTGAGCTTAAGAGGATACTT+GGG | - | chr1.4:31187454-31187473 | MS.gene064969:CDS | 40.0% | |
| TAACAAAGGGTGAGTAGGAT+AGG | - | chr1.4:31191953-31191972 | MS.gene064969:CDS | 40.0% | |
| TAATGTGGGTGAGATTCGTA+CGG | - | chr1.4:31187494-31187513 | MS.gene064969:CDS | 40.0% | |
| TAGAAGAGTAGGTGTGTTCT+CGG | - | chr1.4:31189557-31189576 | MS.gene064969:intron | 40.0% | |
| TATCCTTTCCTGTCCTTATC+CGG | + | chr1.4:31191273-31191292 | None:intergenic | 40.0% | |
| TCCTGTGTCCTTCAATTCTT+TGG | - | chr1.4:31192441-31192460 | MS.gene064969:CDS | 40.0% | |
| TCTACGCAAAGAGAACTTCT+TGG | + | chr1.4:31188629-31188648 | None:intergenic | 40.0% | |
| TCTTGCGCTGTTACTCATTA+AGG | - | chr1.4:31190762-31190781 | MS.gene064969:intron | 40.0% | |
| TGAAGAAGTTCAGCAAGAAG+TGG | - | chr1.4:31188121-31188140 | MS.gene064969:intron | 40.0% | |
| TGAGCTTAAGAGGATACTTG+GGG | - | chr1.4:31187455-31187474 | MS.gene064969:CDS | 40.0% | |
| TGCATGCTACAGCATAAGTA+GGG | + | chr1.4:31189129-31189148 | None:intergenic | 40.0% | |
| TGGAGTTTGCAGAATGAACA+AGG | - | chr1.4:31187669-31187688 | MS.gene064969:CDS | 40.0% | |
| TGGGTATGCGGTAAAATTAG+TGG | - | chr1.4:31189764-31189783 | MS.gene064969:intron | 40.0% | |
| TGGTCATAGTCCTGTTCATA+AGG | - | chr1.4:31187410-31187429 | MS.gene064969:CDS | 40.0% | |
| TTATGGTTGTTGGTGCAGAT+TGG | - | chr1.4:31187649-31187668 | MS.gene064969:CDS | 40.0% | |
| TTCCTATCATGTGCACCAAA+CGG | - | chr1.4:31192063-31192082 | MS.gene064969:CDS | 40.0% | |
| TTTGTTGGAAACAGTTGTCC+AGG | - | chr1.4:31192350-31192369 | MS.gene064969:CDS | 40.0% | |
| ! | AAGAAGTATAGGTCGATGGA+TGG | - | chr1.4:31191824-31191843 | MS.gene064969:CDS | 40.0% |
| ! | ATGGTGTTGAAGAGTTATGG+AGG | - | chr1.4:31191801-31191820 | MS.gene064969:CDS | 40.0% |
| ! | CAGGTTGGAGTTATACAAGA+AGG | + | chr1.4:31191628-31191647 | None:intergenic | 40.0% |
| ! | CCTATGGATTTGGAACATGT+GGG | - | chr1.4:31189322-31189341 | MS.gene064969:intron | 40.0% |
| ! | CTACCATTTCTGTTTTCTCC+TGG | + | chr1.4:31188229-31188248 | None:intergenic | 40.0% |
| ! | GAAAAGAAAGGATGGTTTGG+TGG | - | chr1.4:31188551-31188570 | MS.gene064969:intron | 40.0% |
| ! | GAAACAGGTTGGAATTACAC+AGG | + | chr1.4:31191647-31191666 | None:intergenic | 40.0% |
| ! | GAGATGGTGTTGAAGAGTTA+TGG | - | chr1.4:31191798-31191817 | MS.gene064969:CDS | 40.0% |
| ! | GAGGATGAGGGACTTTTATA+TGG | - | chr1.4:31187821-31187840 | MS.gene064969:intron | 40.0% |
| ! | GGTGTTGCGAATTCATCTAA+TGG | + | chr1.4:31192882-31192901 | None:intergenic | 40.0% |
| ! | TTCCATTCACTCGCAACTTT+TGG | + | chr1.4:31190557-31190576 | None:intergenic | 40.0% |
| ! | TTCTTTTGCCTCAGTTGACT+TGG | - | chr1.4:31188198-31188217 | MS.gene064969:intron | 40.0% |
| ! | TTGTTTTCAGCCACCCTTTA+GGG | - | chr1.4:31191025-31191044 | MS.gene064969:intron | 40.0% |
| !! | CCTTTAGGGTTTAGTAAGTC+AGG | - | chr1.4:31191039-31191058 | MS.gene064969:intron | 40.0% |
| !! | TGAAGAGGAGTATCACGATT+CGG | + | chr1.4:31187588-31187607 | None:intergenic | 40.0% |
| !! | TTCAATTCTTTGGGCTAGCT+TGG | - | chr1.4:31192451-31192470 | MS.gene064969:CDS | 40.0% |
| !! | TTTGTTTTCAGCCACCCTTT+AGG | - | chr1.4:31191024-31191043 | MS.gene064969:intron | 40.0% |
| !!! | CACAGGATTGCCATCTTTTT+TGG | - | chr1.4:31192674-31192693 | MS.gene064969:CDS | 40.0% |
| !!! | CACTCGCAACTTTTGGTTTT+CGG | + | chr1.4:31190550-31190569 | None:intergenic | 40.0% |
| !!! | GGAGGGTTTTAAAACATCAC+AGG | - | chr1.4:31192657-31192676 | MS.gene064969:CDS | 40.0% |
| AAACCGGATAAGGACAGGAA+AGG | - | chr1.4:31191267-31191286 | MS.gene064969:intron | 45.0% | |
| AAGGGTTGAGGCCTATTCTT+TGG | - | chr1.4:31188837-31188856 | MS.gene064969:intron | 45.0% | |
| AATACCACTAGGCCAACCTA+TGG | + | chr1.4:31189420-31189439 | None:intergenic | 45.0% | |
| ACCGACACTCTAGATTAAGG+GGG | + | chr1.4:31189274-31189293 | None:intergenic | 45.0% | |
| ACGCAAAGAGAACTTCTTGG+TGG | + | chr1.4:31188626-31188645 | None:intergenic | 45.0% | |
| ACTCTGCATGATCTCACACA+AGG | - | chr1.4:31188049-31188068 | MS.gene064969:intron | 45.0% | |
| AGAAGAGTAGGTGTGTTCTC+GGG | - | chr1.4:31189558-31189577 | MS.gene064969:intron | 45.0% | |
| AGCAGAAGTCGTCATAAGGA+CGG | - | chr1.4:31188791-31188810 | MS.gene064969:intron | 45.0% | |
| AGTGACCAATACTCTGATGG+TGG | + | chr1.4:31192835-31192854 | None:intergenic | 45.0% | |
| AGTGGCTGCTGAAATGCTTA+TGG | - | chr1.4:31187632-31187651 | MS.gene064969:CDS | 45.0% | |
| ATACCACTAGGCCAACCTAT+GGG | + | chr1.4:31189419-31189438 | None:intergenic | 45.0% | |
| ATAGACAGAGAAGAGGGGTA+AGG | - | chr1.4:31189367-31189386 | MS.gene064969:intron | 45.0% | |
| ATATAGGCTAACGGTCCGTT+TGG | - | chr1.4:31191210-31191229 | MS.gene064969:intron | 45.0% | |
| ATTCTGTTGAGGTTGTTGCG+AGG | - | chr1.4:31188711-31188730 | MS.gene064969:intron | 45.0% | |
| ATTGGAGGATGCACTTAAGC+TGG | - | chr1.4:31188415-31188434 | MS.gene064969:intron | 45.0% | |
| CACCGACACTCTAGATTAAG+GGG | + | chr1.4:31189275-31189294 | None:intergenic | 45.0% | |
| CAGAGAAATTTGTCGCTGCA+GGG | + | chr1.4:31192938-31192957 | None:intergenic | 45.0% | |
| CCCAAAGAATTGAAGGACAC+AGG | + | chr1.4:31192445-31192464 | None:intergenic | 45.0% | |
| CCCACATGTTCCAAATCCAT+AGG | + | chr1.4:31189325-31189344 | None:intergenic | 45.0% | |
| CGAAACATGCCTGATATGTG+TGG | - | chr1.4:31192558-31192577 | MS.gene064969:CDS | 45.0% | |
| CGCAAGAAGCTAATGAATCC+AGG | + | chr1.4:31190749-31190768 | None:intergenic | 45.0% | |
| CTATGAGGAAACCCATAGGT+TGG | - | chr1.4:31189405-31189424 | MS.gene064969:intron | 45.0% | |
| CTGCTTCATCTTGGTTTCAG+TGG | - | chr1.4:31192955-31192974 | MS.gene064969:CDS | 45.0% | |
| CTTGGGCAAAATGGTGTAGA+AGG | - | chr1.4:31187772-31187791 | MS.gene064969:intron | 45.0% | |
| GAGCAAGCACTAACCTTAAC+AGG | + | chr1.4:31188989-31189008 | None:intergenic | 45.0% | |
| GAGCTTAAGAGGATACTTGG+GGG | - | chr1.4:31187456-31187475 | MS.gene064969:CDS | 45.0% | |
| GATCTCACACAAGGAAAAGG+AGG | - | chr1.4:31188058-31188077 | MS.gene064969:intron | 45.0% | |
| GCAGTGACCCAAGTATAATC+TGG | + | chr1.4:31193068-31193087 | None:intergenic | 45.0% | |
| GCCTGAGTAACATCAATACC+AGG | + | chr1.4:31188176-31188195 | None:intergenic | 45.0% | |
| GGGTAGTAAAGAGCTAGCAA+GGG | + | chr1.4:31189722-31189741 | None:intergenic | 45.0% | |
| GGTAATAAGTGGAAGAGTGG+TGG | + | chr1.4:31190239-31190258 | None:intergenic | 45.0% | |
| GGTAGGATCTTGGAAAGCTA+AGG | - | chr1.4:31188244-31188263 | MS.gene064969:intron | 45.0% | |
| GGTGAGCTTAAGAGGATACT+TGG | - | chr1.4:31187453-31187472 | MS.gene064969:CDS | 45.0% | |
| GTGACCAATACTCTGATGGT+GGG | + | chr1.4:31192834-31192853 | None:intergenic | 45.0% | |
| GTGACCCAAGTATAATCTGG+TGG | + | chr1.4:31193065-31193084 | None:intergenic | 45.0% | |
| GTGATTGTAGGGTGGAATTG+GGG | - | chr1.4:31191748-31191767 | MS.gene064969:CDS | 45.0% | |
| GTTTGCAGAATGAACAAGGG+TGG | - | chr1.4:31187673-31187692 | MS.gene064969:CDS | 45.0% | |
| TACACATTGGTACTCTGGCA+AGG | + | chr1.4:31190676-31190695 | None:intergenic | 45.0% | |
| TAGACAGAGAAGAGGGGTAA+GGG | - | chr1.4:31189368-31189387 | MS.gene064969:intron | 45.0% | |
| TAGCAGCAGAAGTCGTCATA+AGG | - | chr1.4:31188787-31188806 | MS.gene064969:intron | 45.0% | |
| TCACCCACATTACACAGCTT+AGG | + | chr1.4:31187486-31187505 | None:intergenic | 45.0% | |
| TCCTATCATGTGCACCAAAC+GGG | - | chr1.4:31192064-31192083 | MS.gene064969:CDS | 45.0% | |
| TCGTGATACTCCTCTTCACT+TGG | - | chr1.4:31187590-31187609 | MS.gene064969:CDS | 45.0% | |
| TCTAAGGGCTGACATGACTT+TGG | - | chr1.4:31187935-31187954 | MS.gene064969:intron | 45.0% | |
| TGAGATCATGCAGAGTGATC+CGG | + | chr1.4:31188045-31188064 | None:intergenic | 45.0% | |
| TGGGTAGTAAAGAGCTAGCA+AGG | + | chr1.4:31189723-31189742 | None:intergenic | 45.0% | |
| TTATGGAGCAAGAGGAGTAG+TGG | + | chr1.4:31190169-31190188 | None:intergenic | 45.0% | |
| TTCGGCGAAAGCCAAAGAAT+AGG | + | chr1.4:31188851-31188870 | None:intergenic | 45.0% | |
| TTCTGTTGAGGTTGTTGCGA+GGG | - | chr1.4:31188712-31188731 | MS.gene064969:intron | 45.0% | |
| ! | ACCCCCTTAATCTAGAGTGT+CGG | - | chr1.4:31189270-31189289 | MS.gene064969:intron | 45.0% |
| ! | ATTCTCTCCGGTGCCAATTT+AGG | - | chr1.4:31189485-31189504 | MS.gene064969:intron | 45.0% |
| ! | CAGGTTGGAATTACACAGGT+TGG | + | chr1.4:31191643-31191662 | None:intergenic | 45.0% |
| ! | CATGTGTTGGCCTATGGATT+TGG | - | chr1.4:31189312-31189331 | MS.gene064969:intron | 45.0% |
| ! | GAAAAGGGGTGCGAATCTAA+GGG | - | chr1.4:31187920-31187939 | MS.gene064969:intron | 45.0% |
| ! | GAGGAAGAAGTATAGGTCGA+TGG | - | chr1.4:31191820-31191839 | MS.gene064969:CDS | 45.0% |
| ! | GCAAGGGCATAAGCTAAAAG+TGG | + | chr1.4:31189706-31189725 | None:intergenic | 45.0% |
| ! | GCACCGACACTCTAGATTAA+GGG | + | chr1.4:31189276-31189295 | None:intergenic | 45.0% |
| ! | GCCTATGGATTTGGAACATG+TGG | - | chr1.4:31189321-31189340 | MS.gene064969:intron | 45.0% |
| ! | GGAAGCGGTTTCGATTTTAG+AGG | - | chr1.4:31187515-31187534 | MS.gene064969:CDS | 45.0% |
| ! | TAACGTGTCGATGTTGTGTC+TGG | + | chr1.4:31189176-31189195 | None:intergenic | 45.0% |
| !! | AGAAAGGATGGTTTGGTGGA+TGG | - | chr1.4:31188555-31188574 | MS.gene064969:intron | 45.0% |
| !! | AGCACCGACACTCTAGATTA+AGG | + | chr1.4:31189277-31189296 | None:intergenic | 45.0% |
| !! | ATAGGTTGGCCTAGTGGTAT+TGG | - | chr1.4:31189419-31189438 | MS.gene064969:intron | 45.0% |
| !! | ATGACTTTGGCTGGTTTCGA+CGG | - | chr1.4:31187948-31187967 | MS.gene064969:intron | 45.0% |
| !! | CTTGGTGATGGTTCAGAAGA+TGG | - | chr1.4:31188008-31188027 | MS.gene064969:intron | 45.0% |
| !! | GATGGTAACGGTAGCAATAG+TGG | - | chr1.4:31188515-31188534 | MS.gene064969:intron | 45.0% |
| !! | GCATATTCAGGTTGCCATTC+CGG | - | chr1.4:31192803-31192822 | MS.gene064969:CDS | 45.0% |
| !! | GCCTGGTATTGATGTTACTC+AGG | - | chr1.4:31188172-31188191 | MS.gene064969:intron | 45.0% |
| !! | GTCTCCGTGTCACTTTGATT+TGG | - | chr1.4:31190647-31190666 | MS.gene064969:intron | 45.0% |
| !! | TTGGGCTAGCTTGGTCTTAT+TGG | - | chr1.4:31192460-31192479 | MS.gene064969:CDS | 45.0% |
| !!! | TCTAGACGATGCTGCTTTTG+CGG | - | chr1.4:31188091-31188110 | MS.gene064969:intron | 45.0% |
| !!! | TTTTGCCTCAGTTGACTTGG+AGG | - | chr1.4:31188201-31188220 | MS.gene064969:intron | 45.0% |
| !!! | TTTAAAATAAATACATTTTA+AGG | + | chr1.4:31192514-31192533 | None:intergenic | 5.0% |
| AACCTGCCGCAGATGAACTA+GGG | + | chr1.4:31192998-31193017 | None:intergenic | 50.0% | |
| ACCAGGGAGACATTCTGTTG+AGG | - | chr1.4:31188700-31188719 | MS.gene064969:intron | 50.0% | |
| ACCTCAACAGAATGTCTCCC+TGG | + | chr1.4:31188704-31188723 | None:intergenic | 50.0% | |
| AGACGGCACCCCTAAGAAAA+AGG | + | chr1.4:31191504-31191523 | None:intergenic | 50.0% | |
| AGGCATGTTTCGAAGGAACG+AGG | + | chr1.4:31192550-31192569 | None:intergenic | 50.0% | |
| ATACCGCCCTAGTTCATCTG+CGG | - | chr1.4:31192989-31193008 | MS.gene064969:CDS | 50.0% | |
| CCTATCATGTGCACCAAACG+GGG | - | chr1.4:31192065-31192084 | MS.gene064969:CDS | 50.0% | |
| CTAAGCAGTCAGCACAAAGG+AGG | + | chr1.4:31190029-31190048 | None:intergenic | 50.0% | |
| GAAGATGGTAAAGTCCAGCC+CGG | - | chr1.4:31188023-31188042 | MS.gene064969:intron | 50.0% | |
| GAATCGAACCTGAGACCTCA+AGG | + | chr1.4:31189469-31189488 | None:intergenic | 50.0% | |
| GAGATCATGCAGAGTGATCC+GGG | + | chr1.4:31188044-31188063 | None:intergenic | 50.0% | |
| GAGCTAAGCAGTCAGCACAA+AGG | + | chr1.4:31190032-31190051 | None:intergenic | 50.0% | |
| GATCCCAAGCCAATACCACT+AGG | + | chr1.4:31189431-31189450 | None:intergenic | 50.0% | |
| GCAGAGAAATTTGTCGCTGC+AGG | + | chr1.4:31192939-31192958 | None:intergenic | 50.0% | |
| GCGCCAGGAGAAAACAGAAA+TGG | - | chr1.4:31188223-31188242 | MS.gene064969:intron | 50.0% | |
| GGTGCACATGATAGGAAGAC+AGG | + | chr1.4:31192060-31192079 | None:intergenic | 50.0% | |
| GGTTCCCACCATCAGAGTAT+TGG | - | chr1.4:31192827-31192846 | MS.gene064969:CDS | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | - | chr1.4:31189473-31189492 | MS.gene064969:intron | 50.0% | |
| GTGTAGAAGGTTGCCTCGTT+TGG | - | chr1.4:31187785-31187804 | MS.gene064969:intron | 50.0% | |
| GTTGTGTCTGGTAACCATGC+TGG | + | chr1.4:31189164-31189183 | None:intergenic | 50.0% | |
| TAGCCCACCTAAATTGGCAC+CGG | + | chr1.4:31189495-31189514 | None:intergenic | 50.0% | |
| TCATCGTCTGTCATAGCTCC+AGG | + | chr1.4:31188317-31188336 | None:intergenic | 50.0% | |
| TCTGTTGAGGTTGTTGCGAG+GGG | - | chr1.4:31188713-31188732 | MS.gene064969:intron | 50.0% | |
| ! | ACACCATTTTGCCCAAGCCA+GGG | + | chr1.4:31187769-31187788 | None:intergenic | 50.0% |
| ! | CCTGACATGGATGGACTTGT+CGG | + | chr1.4:31192906-31192925 | None:intergenic | 50.0% |
| ! | GCATGTCATGTGTTGGCCTA+TGG | - | chr1.4:31189306-31189325 | MS.gene064969:intron | 50.0% |
| ! | GGAAAAGGGGTGCGAATCTA+AGG | - | chr1.4:31187919-31187938 | MS.gene064969:intron | 50.0% |
| ! | TACACCATTTTGCCCAAGCC+AGG | + | chr1.4:31187770-31187789 | None:intergenic | 50.0% |
| ! | TCTCCGGTGCCAATTTAGGT+GGG | - | chr1.4:31189489-31189508 | MS.gene064969:intron | 50.0% |
| !! | AAACCCATAGGTTGGCCTAG+TGG | - | chr1.4:31189413-31189432 | MS.gene064969:intron | 50.0% |
| !! | AGTGGTATTGGCTTGGGATC+TGG | - | chr1.4:31189431-31189450 | MS.gene064969:intron | 50.0% |
| !! | CTACTGTTTGGTGCGCCAAT+AGG | + | chr1.4:31192006-31192025 | None:intergenic | 50.0% |
| !! | GTGGTATTGGCTTGGGATCT+GGG | - | chr1.4:31189432-31189451 | MS.gene064969:intron | 50.0% |
| !! | GTTTGGTGCGCCAATAGGAA+AGG | + | chr1.4:31192001-31192020 | None:intergenic | 50.0% |
| !! | TATTCAGGTTGCCATTCCGG+TGG | - | chr1.4:31192806-31192825 | MS.gene064969:CDS | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | - | chr1.4:31189425-31189444 | MS.gene064969:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | - | chr1.4:31189424-31189443 | MS.gene064969:intron | 50.0% |
| AGCATTATCAGCCCCTGGCT+TGG | - | chr1.4:31187754-31187773 | MS.gene064969:intron | 55.0% | |
| AGGGCTGACATGACTTTGGC+TGG | - | chr1.4:31187939-31187958 | MS.gene064969:intron | 55.0% | |
| CCGACAAGTCCATCCATGTC+AGG | - | chr1.4:31192903-31192922 | MS.gene064969:CDS | 55.0% | |
| CTCTCTTCGCCTGACATGGA+TGG | + | chr1.4:31192915-31192934 | None:intergenic | 55.0% | |
| GAACCTGCCGCAGATGAACT+AGG | + | chr1.4:31192999-31193018 | None:intergenic | 55.0% | |
| GCAGATGAACTAGGGCGGTA+TGG | + | chr1.4:31192990-31193009 | None:intergenic | 55.0% | |
| GCATTATCAGCCCCTGGCTT+GGG | - | chr1.4:31187755-31187774 | MS.gene064969:intron | 55.0% | |
| GGGTGAGATTCGTACGGAAG+CGG | - | chr1.4:31187500-31187519 | MS.gene064969:CDS | 55.0% | |
| GGTGGAATTGCAAACGGGTC+TGG | + | chr1.4:31193047-31193066 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTCAAGG+AGG | + | chr1.4:31189466-31189485 | None:intergenic | 55.0% | |
| ! | CACCATTTTGCCCAAGCCAG+GGG | + | chr1.4:31187768-31187787 | None:intergenic | 55.0% |
| ! | CTCTCCGGTGCCAATTTAGG+TGG | - | chr1.4:31189488-31189507 | MS.gene064969:intron | 55.0% |
| ! | GACATGGATGGACTTGTCGG+CGG | + | chr1.4:31192903-31192922 | None:intergenic | 55.0% |
| !! | ACTCTGATGGTGGGAACCAC+CGG | + | chr1.4:31192825-31192844 | None:intergenic | 55.0% |
| !! | CCCCGTTTGGTGCACATGAT+AGG | + | chr1.4:31192068-31192087 | None:intergenic | 55.0% |
| !! | CTCGTTTGGTAGCGACGATG+CGG | - | chr1.4:31187799-31187818 | MS.gene064969:intron | 55.0% |
| AGCGACGATGCGGAGGATGA+GGG | - | chr1.4:31187809-31187828 | MS.gene064969:intron | 60.0% | |
| AGGGCTCTCTTCGCCTGACA+TGG | + | chr1.4:31192919-31192938 | None:intergenic | 60.0% | |
| CGCATCGTCGCTACCAAACG+AGG | + | chr1.4:31187801-31187820 | None:intergenic | 60.0% | |
| CGGCAGGTTCCAGCAGTAGT+AGG | - | chr1.4:31193009-31193028 | MS.gene064969:CDS | 60.0% | |
| CTGCCGCAGATGAACTAGGG+CGG | + | chr1.4:31192995-31193014 | None:intergenic | 60.0% | |
| GTGCTCCTCCTTGAGGTCTC+AGG | - | chr1.4:31189458-31189477 | MS.gene064969:intron | 60.0% | |
| TAGCGACGATGCGGAGGATG+AGG | - | chr1.4:31187808-31187827 | MS.gene064969:intron | 60.0% | |
| TCATGCAGAGTGATCCGGGC+TGG | + | chr1.4:31188040-31188059 | None:intergenic | 60.0% | |
| TGGCGCCTCCAAGTCAACTG+AGG | + | chr1.4:31188209-31188228 | None:intergenic | 60.0% | |
| TTGCGAGGGGCGATGAGCAA+CGG | - | chr1.4:31188726-31188745 | MS.gene064969:intron | 60.0% | |
| ! | TGGGAGTGTGCTCCTCCTTG+AGG | - | chr1.4:31189451-31189470 | MS.gene064969:intron | 60.0% |
| !! | AGCCCCTGGCTTGGGCAAAA+TGG | - | chr1.4:31187763-31187782 | MS.gene064969:intron | 60.0% |
| !! | GATGGTGGGAACCACCGGAA+TGG | + | chr1.4:31192820-31192839 | None:intergenic | 60.0% |
| !! | GTTTGGTAGCGACGATGCGG+AGG | - | chr1.4:31187802-31187821 | MS.gene064969:intron | 60.0% |
| !! | TCAGTTGACTTGGAGGCGCC+AGG | - | chr1.4:31188208-31188227 | MS.gene064969:intron | 60.0% |
| CGCCCTAGTTCATCTGCGGC+AGG | - | chr1.4:31192993-31193012 | MS.gene064969:CDS | 65.0% | |
| CGAGGGGCGATGAGCAACGG+AGG | - | chr1.4:31188729-31188748 | MS.gene064969:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 31187384 | 31193154 | 31187384 | ID=MS.gene064969 |
| chr1.4 | mRNA | 31187384 | 31193154 | 31187384 | ID=MS.gene064969.t1;Parent=MS.gene064969 |
| chr1.4 | exon | 31191544 | 31193154 | 31191544 | ID=MS.gene064969.t1.exon1;Parent=MS.gene064969.t1 |
| chr1.4 | CDS | 31191544 | 31193154 | 31191544 | ID=cds.MS.gene064969.t1;Parent=MS.gene064969.t1 |
| chr1.4 | exon | 31187384 | 31187725 | 31187384 | ID=MS.gene064969.t1.exon2;Parent=MS.gene064969.t1 |
| chr1.4 | CDS | 31187384 | 31187725 | 31187384 | ID=cds.MS.gene064969.t1;Parent=MS.gene064969.t1 |
| Gene Sequence |
| Protein sequence |
