Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71945.t1 | XP_003608715.1 | 99.6 | 227 | 1 | 0 | 1 | 227 | 1 | 227 | 1.70E-92 | 349 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71945.t1 | Q0VFP5 | 53.6 | 235 | 93 | 5 | 1 | 227 | 1 | 227 | 5.8e-25 | 115.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71945.t1 | G7JIW9 | 99.6 | 227 | 1 | 0 | 1 | 227 | 1 | 227 | 1.2e-92 | 349.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene71945 | 0.838676 | 2.50E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene71945 | 0.802019 | 6.84E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene71945 | 0.855631 | 5.54E-62 | -1.69E-46 |
| MS.gene04919 | MS.gene71945 | 0.820337 | 7.24E-53 | -1.69E-46 |
| MS.gene04920 | MS.gene71945 | 0.845476 | 3.97E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene71945 | 0.885158 | 1.04E-71 | -1.69E-46 |
| MS.gene049283 | MS.gene71945 | 0.847087 | 1.44E-59 | -1.69E-46 |
| MS.gene049321 | MS.gene71945 | -0.827137 | 1.85E-54 | -1.69E-46 |
| MS.gene049343 | MS.gene71945 | 0.85982 | 3.17E-63 | -1.69E-46 |
| MS.gene049368 | MS.gene71945 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene71945 | -0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene71945 | 0.80831 | 3.30E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene71945 | 0.862353 | 5.38E-64 | -1.69E-46 |
| MS.gene049652 | MS.gene71945 | 0.85341 | 2.43E-61 | -1.69E-46 |
| MS.gene049680 | MS.gene71945 | 0.832276 | 1.04E-55 | -1.69E-46 |
| MS.gene049977 | MS.gene71945 | 0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene71945 | 0.860821 | 1.58E-63 | -1.69E-46 |
| MS.gene050559 | MS.gene71945 | 0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene71945 | 0.819816 | 9.52E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene71945 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene71945 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene71945 | 0.807166 | 5.77E-50 | -1.69E-46 |
| MS.gene050737 | MS.gene71945 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene71945 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene71945 | 0.830436 | 2.94E-55 | -1.69E-46 |
| MS.gene051332 | MS.gene71945 | 0.809196 | 2.13E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene71945 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene71945 | 0.80653 | 7.87E-50 | -1.69E-46 |
| MS.gene051597 | MS.gene71945 | 0.828317 | 9.61E-55 | -1.69E-46 |
| MS.gene051637 | MS.gene71945 | 0.82239 | 2.43E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene71945 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene71945 | 0.844089 | 9.38E-59 | -1.69E-46 |
| MS.gene051848 | MS.gene71945 | -0.810377 | 1.19E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene71945 | 0.846506 | 2.08E-59 | -1.69E-46 |
| MS.gene052108 | MS.gene71945 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene71945 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene71945 | 0.806204 | 9.22E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene71945 | 0.829589 | 4.73E-55 | -1.69E-46 |
| MS.gene052500 | MS.gene71945 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene71945 | 0.800085 | 1.70E-48 | -1.69E-46 |
| MS.gene052518 | MS.gene71945 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene71945 | 0.851604 | 7.96E-61 | -1.69E-46 |
| MS.gene052533 | MS.gene71945 | 0.83649 | 9.08E-57 | -1.69E-46 |
| MS.gene052534 | MS.gene71945 | 0.820893 | 5.39E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene71945 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene052685 | MS.gene71945 | 0.823114 | 1.65E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene71945 | 0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene71945 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene052888 | MS.gene71945 | 0.805901 | 1.07E-49 | -1.69E-46 |
| MS.gene052889 | MS.gene71945 | 0.827545 | 1.47E-54 | -1.69E-46 |
| MS.gene052890 | MS.gene71945 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene71945 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene052954 | MS.gene71945 | 0.834923 | 2.26E-56 | -1.69E-46 |
| MS.gene053006 | MS.gene71945 | 0.830198 | 3.36E-55 | -1.69E-46 |
| MS.gene05308 | MS.gene71945 | 0.805096 | 1.57E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene71945 | 0.800961 | 1.13E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene71945 | 0.832046 | 1.18E-55 | -1.69E-46 |
| MS.gene053228 | MS.gene71945 | 0.812115 | 4.99E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene71945 | -0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene71945 | 0.83141 | 1.70E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene71945 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene71945 | 0.831391 | 1.71E-55 | -1.69E-46 |
| MS.gene053995 | MS.gene71945 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene71945 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene71945 | 0.812068 | 5.10E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene71945 | 0.821318 | 4.30E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene71945 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene71945 | 0.871138 | 8.58E-67 | -1.69E-46 |
| MS.gene054709 | MS.gene71945 | 0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene71945 | 0.800232 | 1.59E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene71945 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene71945 | 0.823833 | 1.12E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene71945 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene05517 | MS.gene71945 | 0.831384 | 1.72E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene71945 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene71945 | 0.866756 | 2.26E-65 | -1.69E-46 |
| MS.gene055586 | MS.gene71945 | 0.837877 | 4.01E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene71945 | 0.818038 | 2.41E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene71945 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene71945 | 0.827439 | 1.56E-54 | -1.69E-46 |
| MS.gene055801 | MS.gene71945 | 0.80178 | 7.66E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene71945 | 0.817969 | 2.50E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene71945 | 0.838418 | 2.91E-57 | -1.69E-46 |
| MS.gene056010 | MS.gene71945 | 0.803402 | 3.55E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene71945 | 0.801246 | 9.86E-49 | -1.69E-46 |
| MS.gene05624 | MS.gene71945 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene71945 | 0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene71945 | 0.815855 | 7.46E-52 | -1.69E-46 |
| MS.gene05659 | MS.gene71945 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene71945 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene71945 | 0.90792 | 3.01E-81 | -1.69E-46 |
| MS.gene056776 | MS.gene71945 | 0.842495 | 2.50E-58 | -1.69E-46 |
| MS.gene056825 | MS.gene71945 | 0.8262 | 3.09E-54 | -1.69E-46 |
| MS.gene056834 | MS.gene71945 | 0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene71945 | 0.841497 | 4.58E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene71945 | 0.840577 | 8.00E-58 | -1.69E-46 |
| MS.gene056986 | MS.gene71945 | 0.843929 | 1.04E-58 | -1.69E-46 |
| MS.gene057026 | MS.gene71945 | 0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene71945 | 0.851904 | 6.55E-61 | -1.69E-46 |
| MS.gene057102 | MS.gene71945 | 0.892022 | 2.33E-74 | -1.69E-46 |
| MS.gene057155 | MS.gene71945 | 0.863378 | 2.60E-64 | -1.69E-46 |
| MS.gene057208 | MS.gene71945 | 0.888381 | 6.21E-73 | -1.69E-46 |
| MS.gene057611 | MS.gene71945 | 0.820887 | 5.41E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene71945 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene71945 | 0.857117 | 2.03E-62 | -1.69E-46 |
| MS.gene058009 | MS.gene71945 | 0.832607 | 8.58E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene71945 | 0.814931 | 1.20E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene71945 | 0.819728 | 9.97E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene71945 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene71945 | 0.82295 | 1.80E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene71945 | 0.816058 | 6.73E-52 | -1.69E-46 |
| MS.gene058592 | MS.gene71945 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene71945 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene71945 | -0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene71945 | 0.847737 | 9.57E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene71945 | 0.859338 | 4.43E-63 | -1.69E-46 |
| MS.gene05878 | MS.gene71945 | 0.812597 | 3.91E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene71945 | 0.835007 | 2.16E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene71945 | 0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene05952 | MS.gene71945 | 0.871022 | 9.38E-67 | -1.69E-46 |
| MS.gene05956 | MS.gene71945 | 0.807093 | 5.98E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene71945 | 0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene71945 | -0.874256 | 7.79E-68 | -1.69E-46 |
| MS.gene059901 | MS.gene71945 | -0.845754 | 3.33E-59 | -1.69E-46 |
| MS.gene059935 | MS.gene71945 | 0.834107 | 3.63E-56 | -1.69E-46 |
| MS.gene059965 | MS.gene71945 | 0.813005 | 3.19E-51 | -1.69E-46 |
| MS.gene060012 | MS.gene71945 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene71945 | 0.821936 | 3.10E-53 | -1.69E-46 |
| MS.gene060258 | MS.gene71945 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene060310 | MS.gene71945 | 0.802703 | 4.95E-49 | -1.69E-46 |
| MS.gene060338 | MS.gene71945 | 0.826262 | 2.99E-54 | -1.69E-46 |
| MS.gene060352 | MS.gene71945 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene71945 | 0.855556 | 5.83E-62 | -1.69E-46 |
| MS.gene060527 | MS.gene71945 | 0.843012 | 1.82E-58 | -1.69E-46 |
| MS.gene060716 | MS.gene71945 | 0.807995 | 3.85E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene71945 | 0.806798 | 6.91E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene71945 | 0.815641 | 8.33E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene71945 | 0.817672 | 2.92E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene71945 | 0.82568 | 4.11E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene71945 | 0.893004 | 9.41E-75 | -1.69E-46 |
| MS.gene060937 | MS.gene71945 | 0.888829 | 4.17E-73 | -1.69E-46 |
| MS.gene061100 | MS.gene71945 | 0.827191 | 1.79E-54 | -1.69E-46 |
| MS.gene061135 | MS.gene71945 | 0.843564 | 1.30E-58 | -1.69E-46 |
| MS.gene061160 | MS.gene71945 | 0.802674 | 5.01E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene71945 | 0.835471 | 1.65E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71945.t1 | MTR_4g100970 | 99.559 | 227 | 1 | 0 | 1 | 227 | 1 | 227 | 2.76e-167 | 460 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71945.t1 | AT3G13200 | 73.913 | 230 | 57 | 1 | 1 | 227 | 1 | 230 | 5.25e-105 | 303 |
Find 51 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTGTTCGTTTCCACCTT+TGG | 0.329362 | 8.3:-20149011 | None:intergenic |
| GGATGACACTGAAGCTTTGC+TGG | 0.370195 | 8.3:+20151058 | MS.gene71945:CDS |
| GATGAATCGCTTTGCGAGCT+TGG | 0.402778 | 8.3:-20152262 | None:intergenic |
| CATCTTTCAGTGTCAAAAGA+AGG | 0.407995 | 8.3:+20151668 | MS.gene71945:CDS |
| TCCATGCTTTGACAGATGAC+AGG | 0.425910 | 8.3:+20150299 | MS.gene71945:intron |
| CCTTTGGCCGGTGCCCATGT+TGG | 0.438499 | 8.3:-20148995 | None:intergenic |
| TGCGAGCTTGGTTTCTCCAC+GGG | 0.448028 | 8.3:-20152250 | None:intergenic |
| CTTACTTCATGTATTTGTGC+AGG | 0.449310 | 8.3:-20152320 | None:intergenic |
| TGTTCGTTTCCACCTTTGGC+CGG | 0.457672 | 8.3:-20149007 | None:intergenic |
| ATGTCGGGTTATTGATCAAA+GGG | 0.461011 | 8.3:-20151648 | None:intergenic |
| TTGACAGATGACAGGGATCA+TGG | 0.467290 | 8.3:+20150307 | MS.gene71945:intron |
| ATTTGTGCAGGAATTTCCTA+TGG | 0.474919 | 8.3:-20152308 | None:intergenic |
| AGAGGAAGATCTTAAAGTAA+AGG | 0.493826 | 8.3:+20151603 | MS.gene71945:CDS |
| GATTCATCAATGACACCATC+AGG | 0.497137 | 8.3:+20152277 | MS.gene71945:CDS |
| TTGCGAGCTTGGTTTCTCCA+CGG | 0.514076 | 8.3:-20152251 | None:intergenic |
| TTGAACAAATAAAGAAGGAA+AGG | 0.524193 | 8.3:+20151087 | MS.gene71945:CDS |
| CGCTAGACCAACATGGGCAC+CGG | 0.524224 | 8.3:+20148988 | MS.gene71945:CDS |
| TGAACAAATAAAGAAGGAAA+GGG | 0.539554 | 8.3:+20151088 | MS.gene71945:CDS |
| TGAGCTTGAACAAATAAAGA+AGG | 0.544665 | 8.3:+20151082 | MS.gene71945:CDS |
| CCATGCTTTGACAGATGACA+GGG | 0.549331 | 8.3:+20150300 | MS.gene71945:intron |
| AATAAAGAAGGAAAGGGCAC+AGG | 0.549972 | 8.3:+20151094 | MS.gene71945:CDS |
| GATGACAGGGATCATGGAAG+GGG | 0.552181 | 8.3:+20150313 | MS.gene71945:intron |
| GAAAGACGGGCAGGATACAC+AGG | 0.556936 | 8.3:+20150063 | MS.gene71945:CDS |
| CGACCGCCGCTAGACCAACA+TGG | 0.559680 | 8.3:+20148981 | MS.gene71945:CDS |
| GATGTCGGGTTATTGATCAA+AGG | 0.561231 | 8.3:-20151649 | None:intergenic |
| ACATGGGCACCGGCCAAAGG+TGG | 0.565377 | 8.3:+20148998 | MS.gene71945:CDS |
| GACAGGGATCATGGAAGGGG+CGG | 0.566656 | 8.3:+20150316 | MS.gene71945:CDS |
| GGAAGATCTTAAAGTAAAGG+AGG | 0.567127 | 8.3:+20151606 | MS.gene71945:CDS |
| CGCACACCACTCTCAAACCT+AGG | 0.567486 | 8.3:+20149086 | MS.gene71945:CDS |
| CAGATGACAGGGATCATGGA+AGG | 0.571029 | 8.3:+20150311 | MS.gene71945:intron |
| CACAGGATGAGTTAAAGAGA+AGG | 0.579428 | 8.3:+20150080 | MS.gene71945:CDS |
| GCCAAAGGTGGAAACGAACA+AGG | 0.588363 | 8.3:+20149010 | MS.gene71945:CDS |
| CCAACATGGGCACCGGCCAA+AGG | 0.589099 | 8.3:+20148995 | MS.gene71945:CDS |
| CCATCAGGAATGATTTCCAT+AGG | 0.597909 | 8.3:+20152292 | MS.gene71945:CDS |
| AGATGACAGGGATCATGGAA+GGG | 0.602143 | 8.3:+20150312 | MS.gene71945:intron |
| CCTATGGAAATCATTCCTGA+TGG | 0.606526 | 8.3:-20152292 | None:intergenic |
| CAGTGATGACGACGACGATG+AGG | 0.607786 | 8.3:+20151037 | MS.gene71945:intron |
| GTATAGGTGGGATGATGATG+TGG | 0.611321 | 8.3:+20152212 | MS.gene71945:intron |
| GACCGCCGCTAGACCAACAT+GGG | 0.618179 | 8.3:+20148982 | MS.gene71945:CDS |
| CGGTGCCCATGTTGGTCTAG+CGG | 0.624635 | 8.3:-20148987 | None:intergenic |
| AGCTTGATGAACGTGAAAGG+AGG | 0.626044 | 8.3:+20150116 | MS.gene71945:CDS |
| GCAGGAACAACAACAACAAG+AGG | 0.626881 | 8.3:+20151585 | MS.gene71945:intron |
| GGCACAGGAAAAGCTGCGCA+AGG | 0.629250 | 8.3:+20151109 | MS.gene71945:CDS |
| AAGTCAACAGTGATGATGAA+AGG | 0.633175 | 8.3:+20150566 | MS.gene71945:CDS |
| ATGAGCTTGATGAACGTGAA+AGG | 0.637079 | 8.3:+20150113 | MS.gene71945:CDS |
| TGCCCATGTTGGTCTAGCGG+CGG | 0.641332 | 8.3:-20148984 | None:intergenic |
| AAGGAGGCAGAGCTTATGCG+TGG | 0.661072 | 8.3:+20151622 | MS.gene71945:CDS |
| AACCTACCTAGGTTTGAGAG+TGG | 0.662167 | 8.3:-20149092 | None:intergenic |
| TCATCTGCATCAACACTGCG+TGG | 0.670152 | 8.3:-20150532 | None:intergenic |
| GTTCATCAAGCTCATCACGT+AGG | 0.739279 | 8.3:-20150105 | None:intergenic |
| AAAGGTGGAAACGAACAAGG+CGG | 0.806134 | 8.3:+20149013 | MS.gene71945:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATTTACATTTTAAATAA+GGG | - | chr8.3:20151559-20151578 | None:intergenic | 10.0% |
| !!! | CATTTTTTTAAAAATTTGTT+TGG | + | chr8.3:20152190-20152209 | MS.gene71945:intron | 10.0% |
| !! | AATCAAAATCAACAAAAAAT+TGG | - | chr8.3:20149125-20149144 | None:intergenic | 15.0% |
| !! | ATCAAAATCAACAAAAAATT+GGG | - | chr8.3:20149124-20149143 | None:intergenic | 15.0% |
| !! | TAATTCAAATCAAATTTGAA+GGG | - | chr8.3:20149558-20149577 | None:intergenic | 15.0% |
| !! | TAATTTGAATCTTGATATTT+AGG | + | chr8.3:20151923-20151942 | MS.gene71945:intron | 15.0% |
| !! | TCAAAAAATAAATCGTATAA+TGG | + | chr8.3:20150148-20150167 | MS.gene71945:CDS | 15.0% |
| !!! | GACAATTTACATTTTAAATA+AGG | - | chr8.3:20151560-20151579 | None:intergenic | 15.0% |
| !!! | TAACGTTTTTTTTTTTTAAG+AGG | - | chr8.3:20150809-20150828 | None:intergenic | 15.0% |
| !!! | TTTAAAAATTTGTTTGGTAT+AGG | + | chr8.3:20152196-20152215 | MS.gene71945:intron | 15.0% |
| !! | AATTCAAATCAAATTTGAAG+GGG | - | chr8.3:20149557-20149576 | None:intergenic | 20.0% |
| !! | AATTTCTCAATGTTATTGAT+AGG | + | chr8.3:20149353-20149372 | MS.gene71945:intron | 20.0% |
| !! | ACATTAAGTGATATAATTCA+TGG | - | chr8.3:20149667-20149686 | None:intergenic | 20.0% |
| !! | CTAATTCAAATCAAATTTGA+AGG | - | chr8.3:20149559-20149578 | None:intergenic | 20.0% |
| !! | GACTGAATATAAATATATCA+TGG | - | chr8.3:20150450-20150469 | None:intergenic | 20.0% |
| !! | TATGGGTAATTAAAATTCAT+TGG | + | chr8.3:20149249-20149268 | MS.gene71945:intron | 20.0% |
| !! | TCAAAATCAACAAAAAATTG+GGG | - | chr8.3:20149123-20149142 | None:intergenic | 20.0% |
| !! | TGCTACTATTTACAAAAATA+AGG | - | chr8.3:20150992-20151011 | None:intergenic | 20.0% |
| !! | TTTATATGCATGTATCATTT+AGG | + | chr8.3:20150633-20150652 | MS.gene71945:intron | 20.0% |
| !!! | AATTAGATAGTTTTTGTTGA+AGG | + | chr8.3:20151377-20151396 | MS.gene71945:intron | 20.0% |
| !!! | ATCTATCTTTTACAGTAAAT+AGG | + | chr8.3:20151990-20152009 | MS.gene71945:intron | 20.0% |
| !!! | ATTAGATAGTTTTTGTTGAA+GGG | + | chr8.3:20151378-20151397 | MS.gene71945:intron | 20.0% |
| !!! | CTTCAAATTTGATTTGAATT+AGG | + | chr8.3:20149557-20149576 | MS.gene71945:intron | 20.0% |
| !!! | TAATACCTTCTAAAAATAGA+TGG | - | chr8.3:20150342-20150361 | None:intergenic | 20.0% |
| !!! | TGATAAGTTAGTTTTTTCAT+GGG | + | chr8.3:20149330-20149349 | MS.gene71945:intron | 20.0% |
| !!! | TTGATAAGTTAGTTTTTTCA+TGG | + | chr8.3:20149329-20149348 | MS.gene71945:intron | 20.0% |
| ! | AAAATCAACAAAAAATTGGG+GGG | - | chr8.3:20149121-20149140 | None:intergenic | 25.0% |
| ! | AAGAAAAATGGCAAACTATT+AGG | - | chr8.3:20151754-20151773 | None:intergenic | 25.0% |
| ! | AAGCTAATTAGAATGTACAT+CGG | + | chr8.3:20151276-20151295 | MS.gene71945:intron | 25.0% |
| ! | AATAAAATAACAACCCTTGA+TGG | - | chr8.3:20150669-20150688 | None:intergenic | 25.0% |
| ! | ACAAGAATTGAAGAATAGAA+TGG | - | chr8.3:20151440-20151459 | None:intergenic | 25.0% |
| ! | AGAAAAATGGCAAACTATTA+GGG | - | chr8.3:20151753-20151772 | None:intergenic | 25.0% |
| ! | ATTCAAATCAAATTTGAAGG+GGG | - | chr8.3:20149556-20149575 | None:intergenic | 25.0% |
| ! | ATTCTATTCTTCAATTCTTG+TGG | + | chr8.3:20151439-20151458 | MS.gene71945:intron | 25.0% |
| ! | CAAAATCAACAAAAAATTGG+GGG | - | chr8.3:20149122-20149141 | None:intergenic | 25.0% |
| ! | CATGGTATTACATAGATAAA+AGG | - | chr8.3:20149180-20149199 | None:intergenic | 25.0% |
| ! | CTACTAAGTGATATAATTTG+GGG | - | chr8.3:20149635-20149654 | None:intergenic | 25.0% |
| ! | CTCGATAAAATGATAACATT+TGG | - | chr8.3:20149488-20149507 | None:intergenic | 25.0% |
| ! | CTTAATCATTTAAAAGAGAG+CGG | - | chr8.3:20149954-20149973 | None:intergenic | 25.0% |
| ! | GCTACTAAGTGATATAATTT+GGG | - | chr8.3:20149636-20149655 | None:intergenic | 25.0% |
| ! | GTTACTGTAATCTGATAATA+CGG | + | chr8.3:20149418-20149437 | MS.gene71945:intron | 25.0% |
| ! | TCGAATTTATTCGTGAAATT+AGG | + | chr8.3:20149206-20149225 | MS.gene71945:intron | 25.0% |
| ! | TGAACAAATAAAGAAGGAAA+GGG | + | chr8.3:20151088-20151107 | MS.gene71945:CDS | 25.0% |
| ! | TGCTACTAAGTGATATAATT+TGG | - | chr8.3:20149637-20149656 | None:intergenic | 25.0% |
| ! | TTCAAATTATAACCACTGAT+TGG | - | chr8.3:20151912-20151931 | None:intergenic | 25.0% |
| ! | TTCTATTCTTCAATTCTTGT+GGG | + | chr8.3:20151440-20151459 | MS.gene71945:intron | 25.0% |
| ! | TTGAACAAATAAAGAAGGAA+AGG | + | chr8.3:20151087-20151106 | MS.gene71945:CDS | 25.0% |
| ! | TTTGAATCTTGATATTTAGG+TGG | + | chr8.3:20151926-20151945 | MS.gene71945:intron | 25.0% |
| !! | AAAAATTTGTTTGGTATAGG+TGG | + | chr8.3:20152199-20152218 | MS.gene71945:intron | 25.0% |
| !! | AAAATTTGTTTGGTATAGGT+GGG | + | chr8.3:20152200-20152219 | MS.gene71945:intron | 25.0% |
| !! | AAGGTATTTGTTACTAAGAT+AGG | - | chr8.3:20151474-20151493 | None:intergenic | 25.0% |
| !! | AGTCACTTAAAACTTTAAAG+TGG | - | chr8.3:20152127-20152146 | None:intergenic | 25.0% |
| !! | ATTAAGCATGTCTTCTTTTA+AGG | - | chr8.3:20150855-20150874 | None:intergenic | 25.0% |
| !! | GTTAAGTTAATTTGATCTTG+AGG | + | chr8.3:20149286-20149305 | MS.gene71945:intron | 25.0% |
| !! | GTTGCATTTATACCTTTTAT+AGG | + | chr8.3:20150041-20150060 | MS.gene71945:intron | 25.0% |
| !! | TATACCTTTTATAGGAAAGA+CGG | + | chr8.3:20150049-20150068 | MS.gene71945:intron | 25.0% |
| !! | TTAAGCATGTCTTCTTTTAA+GGG | - | chr8.3:20150854-20150873 | None:intergenic | 25.0% |
| !! | TTAGATAGTTTTTGTTGAAG+GGG | + | chr8.3:20151379-20151398 | MS.gene71945:intron | 25.0% |
| !! | TTCAGTTAAATAAGTCCTTT+TGG | - | chr8.3:20151729-20151748 | None:intergenic | 25.0% |
| !!! | AATATGCATGCTATTTCTAT+TGG | + | chr8.3:20150731-20150750 | MS.gene71945:intron | 25.0% |
| !!! | ACTTAAAACTTTAAAGTGGT+TGG | - | chr8.3:20152123-20152142 | None:intergenic | 25.0% |
| !!! | ATCATTGACTTTTCAATCAA+CGG | - | chr8.3:20151822-20151841 | None:intergenic | 25.0% |
| !!! | ATCTCTTGAAGAGTATTTTT+GGG | - | chr8.3:20149059-20149078 | None:intergenic | 25.0% |
| !!! | ATGATGAAAGGTTGATAATT+TGG | + | chr8.3:20150578-20150597 | MS.gene71945:intron | 25.0% |
| !!! | ATTATTGATTTTCCAATCAG+TGG | + | chr8.3:20151897-20151916 | MS.gene71945:intron | 25.0% |
| !!! | TATCTCTTGAAGAGTATTTT+TGG | - | chr8.3:20149060-20149079 | None:intergenic | 25.0% |
| !!! | TATTTTTCAAGCGTTATTTG+TGG | + | chr8.3:20152026-20152045 | MS.gene71945:intron | 25.0% |
| !!! | TGGAAGTATTAATATGCAAA+TGG | + | chr8.3:20152085-20152104 | MS.gene71945:intron | 25.0% |
| AAAAAAAACGTTATCACACG+AGG | + | chr8.3:20150816-20150835 | MS.gene71945:intron | 30.0% | |
| AAAAAAACGTTATCACACGA+GGG | + | chr8.3:20150817-20150836 | MS.gene71945:intron | 30.0% | |
| AAAATGAAAACTTGTCTCAC+AGG | - | chr8.3:20150246-20150265 | None:intergenic | 30.0% | |
| AACCATTTCAATGACTATAG+TGG | - | chr8.3:20149905-20149924 | None:intergenic | 30.0% | |
| AATGTAAATTGTCTTTGTGC+AGG | + | chr8.3:20151567-20151586 | MS.gene71945:intron | 30.0% | |
| ACAAAGAGAATTCTCCTAAA+AGG | - | chr8.3:20151409-20151428 | None:intergenic | 30.0% | |
| ACAACTAATTAGCATGCAAA+AGG | - | chr8.3:20151493-20151512 | None:intergenic | 30.0% | |
| AGAGGAAGATCTTAAAGTAA+AGG | + | chr8.3:20151603-20151622 | MS.gene71945:CDS | 30.0% | |
| AGAGTGGTTAGGAATTTATA+AGG | + | chr8.3:20151311-20151330 | MS.gene71945:intron | 30.0% | |
| CTTATTGTAAACCTGTACTT+AGG | + | chr8.3:20149452-20149471 | MS.gene71945:intron | 30.0% | |
| GAGTGGTTAGGAATTTATAA+GGG | + | chr8.3:20151312-20151331 | MS.gene71945:intron | 30.0% | |
| GTGATGTATTGTCATATAGT+AGG | + | chr8.3:20149375-20149394 | MS.gene71945:intron | 30.0% | |
| TAAACCTGTACTTAGGTAAT+TGG | + | chr8.3:20149459-20149478 | MS.gene71945:intron | 30.0% | |
| TCCAATTACTATCCAAGAAA+AGG | + | chr8.3:20150411-20150430 | MS.gene71945:intron | 30.0% | |
| TGAGCTTGAACAAATAAAGA+AGG | + | chr8.3:20151082-20151101 | MS.gene71945:CDS | 30.0% | |
| TGATGAGTCTTTATCTTAAC+AGG | + | chr8.3:20150478-20150497 | MS.gene71945:intron | 30.0% | |
| TGCATTTAAGTAATCTTCGT+CGG | + | chr8.3:20150914-20150933 | MS.gene71945:intron | 30.0% | |
| ! | ATACCTTTTATAGGAAAGAC+GGG | + | chr8.3:20150050-20150069 | MS.gene71945:intron | 30.0% |
| ! | CAGATAAATAGAGTACTTGA+GGG | + | chr8.3:20151343-20151362 | MS.gene71945:intron | 30.0% |
| ! | TAAGCATGTCTTCTTTTAAG+GGG | - | chr8.3:20150853-20150872 | None:intergenic | 30.0% |
| ! | TCAGATAAATAGAGTACTTG+AGG | + | chr8.3:20151342-20151361 | MS.gene71945:intron | 30.0% |
| ! | TCCCTCACTTTAAAGAAAAA+TGG | - | chr8.3:20151766-20151785 | None:intergenic | 30.0% |
| ! | TCCTTTTCTTGGATAGTAAT+TGG | - | chr8.3:20150415-20150434 | None:intergenic | 30.0% |
| ! | TTCTTTTCTTCTCCTTTTCT+TGG | - | chr8.3:20150426-20150445 | None:intergenic | 30.0% |
| !! | CTAGTTTTTACAAGAACAGA+AGG | + | chr8.3:20149691-20149710 | MS.gene71945:intron | 30.0% |
| !!! | GCCATTTTTCTTTAAAGTGA+GGG | + | chr8.3:20151762-20151781 | MS.gene71945:intron | 30.0% |
| !!! | TGCCATTTTTCTTTAAAGTG+AGG | + | chr8.3:20151761-20151780 | MS.gene71945:intron | 30.0% |
| !!! | TTTTTTTTAAGAGGACCACA+AGG | - | chr8.3:20150800-20150819 | None:intergenic | 30.0% |
| AACAATTTCAGGGAGCAAAT+CGG | - | chr8.3:20149518-20149537 | None:intergenic | 35.0% | |
| AATCATTTAAAAGAGAGCGG+AGG | - | chr8.3:20149951-20149970 | None:intergenic | 35.0% | |
| ACCCAATGTCATTCGAAATA+AGG | + | chr8.3:20149722-20149741 | MS.gene71945:intron | 35.0% | |
| AGATCATGACAGCAGATTAA+TGG | - | chr8.3:20152170-20152189 | None:intergenic | 35.0% | |
| AGGATTTGTAGAACCATCAA+GGG | + | chr8.3:20150653-20150672 | MS.gene71945:intron | 35.0% | |
| ATATGCAAATGGTCCATAAC+TGG | + | chr8.3:20152096-20152115 | MS.gene71945:intron | 35.0% | |
| ATCATTTAAAAGAGAGCGGA+GGG | - | chr8.3:20149950-20149969 | None:intergenic | 35.0% | |
| ATGTCGGGTTATTGATCAAA+GGG | - | chr8.3:20151651-20151670 | None:intergenic | 35.0% | |
| ATTTGCTCCCTGAAATTGTT+GGG | + | chr8.3:20149518-20149537 | MS.gene71945:intron | 35.0% | |
| ATTTGTGCAGGAATTTCCTA+TGG | - | chr8.3:20152311-20152330 | None:intergenic | 35.0% | |
| CATCTTTCAGTGTCAAAAGA+AGG | + | chr8.3:20151668-20151687 | MS.gene71945:CDS | 35.0% | |
| CCCAATGTCATTCGAAATAA+GGG | + | chr8.3:20149723-20149742 | MS.gene71945:intron | 35.0% | |
| CCTATTTGCAAATTTCAAGC+GGG | + | chr8.3:20149756-20149775 | MS.gene71945:intron | 35.0% | |
| CGTACATTATGGGACTAAAA+TGG | - | chr8.3:20149874-20149893 | None:intergenic | 35.0% | |
| GAATAAATTCGAATCGTGCA+TGG | - | chr8.3:20149198-20149217 | None:intergenic | 35.0% | |
| GCCTATTTGCAAATTTCAAG+CGG | + | chr8.3:20149755-20149774 | MS.gene71945:intron | 35.0% | |
| GGAAGATCTTAAAGTAAAGG+AGG | + | chr8.3:20151606-20151625 | MS.gene71945:CDS | 35.0% | |
| GTATCCAATTACCTAAGTAC+AGG | - | chr8.3:20149466-20149485 | None:intergenic | 35.0% | |
| TAGGATTTGTAGAACCATCA+AGG | + | chr8.3:20150652-20150671 | MS.gene71945:intron | 35.0% | |
| TGCCACTATAGTCATTGAAA+TGG | + | chr8.3:20149900-20149919 | MS.gene71945:intron | 35.0% | |
| TGTGAATAGTTAGAGTGGTT+AGG | + | chr8.3:20151300-20151319 | MS.gene71945:intron | 35.0% | |
| TGTGCTTGCTTATCTTGTTA+TGG | + | chr8.3:20149231-20149250 | MS.gene71945:intron | 35.0% | |
| TGTTTACCCTTTGCAATTGA+GGG | - | chr8.3:20149850-20149869 | None:intergenic | 35.0% | |
| TTGTTTACCCTTTGCAATTG+AGG | - | chr8.3:20149851-20149870 | None:intergenic | 35.0% | |
| TTTAGTCCCATAATGTACGA+GGG | + | chr8.3:20149875-20149894 | MS.gene71945:intron | 35.0% | |
| ! | AAGTCAACAGTGATGATGAA+AGG | + | chr8.3:20150566-20150585 | MS.gene71945:CDS | 35.0% |
| ! | ACCCTTATTTCGAATGACAT+TGG | - | chr8.3:20149727-20149746 | None:intergenic | 35.0% |
| ! | CCCTTATTTCGAATGACATT+GGG | - | chr8.3:20149726-20149745 | None:intergenic | 35.0% |
| ! | CTTTTGACACTGAAAGATGT+CGG | - | chr8.3:20151667-20151686 | None:intergenic | 35.0% |
| ! | GTGCTTGCTTATCTTGTTAT+GGG | + | chr8.3:20149232-20149251 | MS.gene71945:intron | 35.0% |
| ! | TTTTAGTCCCATAATGTACG+AGG | + | chr8.3:20149874-20149893 | MS.gene71945:intron | 35.0% |
| ! | TTTTGACACTGAAAGATGTC+GGG | - | chr8.3:20151666-20151685 | None:intergenic | 35.0% |
| !!! | CTTGAAGAGTATTTTTGGGA+AGG | - | chr8.3:20149055-20149074 | None:intergenic | 35.0% |
| AACACCTCTCTTAGGATAGA+AGG | + | chr8.3:20151205-20151224 | MS.gene71945:intron | 40.0% | |
| ACAGTAGTGCAATGGTCAAA+TGG | - | chr8.3:20151957-20151976 | None:intergenic | 40.0% | |
| AGCTTTCCATGTTATCACGT+TGG | + | chr8.3:20150001-20150020 | MS.gene71945:intron | 40.0% | |
| AGTGAGGGAGTCAATTCATT+CGG | + | chr8.3:20151777-20151796 | MS.gene71945:intron | 40.0% | |
| ATGAGCTTGATGAACGTGAA+AGG | + | chr8.3:20150113-20150132 | MS.gene71945:CDS | 40.0% | |
| CACAGGATGAGTTAAAGAGA+AGG | + | chr8.3:20150080-20150099 | MS.gene71945:CDS | 40.0% | |
| CATGTTATCACGTTGGTATG+CGG | + | chr8.3:20150008-20150027 | MS.gene71945:intron | 40.0% | |
| CCATCAGGAATGATTTCCAT+AGG | + | chr8.3:20152292-20152311 | MS.gene71945:CDS | 40.0% | |
| CCCGCTTGAAATTTGCAAAT+AGG | - | chr8.3:20149759-20149778 | None:intergenic | 40.0% | |
| CCTATGGAAATCATTCCTGA+TGG | - | chr8.3:20152295-20152314 | None:intergenic | 40.0% | |
| GAACTGCTCACTTAACCAAA+AGG | + | chr8.3:20151711-20151730 | MS.gene71945:intron | 40.0% | |
| GATGTCGGGTTATTGATCAA+AGG | - | chr8.3:20151652-20151671 | None:intergenic | 40.0% | |
| GATTCATCAATGACACCATC+AGG | + | chr8.3:20152277-20152296 | MS.gene71945:CDS | 40.0% | |
| GCCATTGAACCTCTTTAGAT+GGG | + | chr8.3:20151163-20151182 | MS.gene71945:intron | 40.0% | |
| GGATTTACTCTTCAACCTTG+TGG | + | chr8.3:20150782-20150801 | MS.gene71945:intron | 40.0% | |
| GTTCAATGTCCCATCTAAAG+AGG | - | chr8.3:20151175-20151194 | None:intergenic | 40.0% | |
| GTTTACCCTTTGCAATTGAG+GGG | - | chr8.3:20149849-20149868 | None:intergenic | 40.0% | |
| TAAATGCATCCAGAGATGCT+AGG | - | chr8.3:20150902-20150921 | None:intergenic | 40.0% | |
| TAGATGGGACATTGAACTTG+TGG | + | chr8.3:20151178-20151197 | MS.gene71945:intron | 40.0% | |
| TCCCATCTAAAGAGGTTCAA+TGG | - | chr8.3:20151167-20151186 | None:intergenic | 40.0% | |
| TCGAATGACATTGGGTAACT+TGG | - | chr8.3:20149718-20149737 | None:intergenic | 40.0% | |
| TCGGTTGTGAATAGTTAGAG+TGG | + | chr8.3:20151295-20151314 | MS.gene71945:intron | 40.0% | |
| TGCATACAACAGTAGTGCAA+TGG | - | chr8.3:20151965-20151984 | None:intergenic | 40.0% | |
| TGCCATTGAACCTCTTTAGA+TGG | + | chr8.3:20151162-20151181 | MS.gene71945:intron | 40.0% | |
| TTCAAGCGTTATTTGTGGTG+TGG | + | chr8.3:20152031-20152050 | MS.gene71945:intron | 40.0% | |
| TTTACCCTTTGCAATTGAGG+GGG | - | chr8.3:20149848-20149867 | None:intergenic | 40.0% | |
| TTTGCTCCCTGAAATTGTTG+GGG | + | chr8.3:20149519-20149538 | MS.gene71945:intron | 40.0% | |
| ! | AATAAAGAAGGAAAGGGCAC+AGG | + | chr8.3:20151094-20151113 | MS.gene71945:CDS | 40.0% |
| ! | GATTTGCTCCCTGAAATTGT+TGG | + | chr8.3:20149517-20149536 | MS.gene71945:intron | 40.0% |
| ! | GTTGAAGGGGAAATCCTTTT+AGG | + | chr8.3:20151392-20151411 | MS.gene71945:intron | 40.0% |
| ! | TAAAGTGGTTGGTCCAGTTA+TGG | - | chr8.3:20152112-20152131 | None:intergenic | 40.0% |
| AAAGGTGGAAACGAACAAGG+CGG | + | chr8.3:20149013-20149032 | MS.gene71945:CDS | 45.0% | |
| AACCTACCTAGGTTTGAGAG+TGG | - | chr8.3:20149095-20149114 | None:intergenic | 45.0% | |
| ACCTCTCTTAGGATAGAAGG+AGG | + | chr8.3:20151208-20151227 | MS.gene71945:intron | 45.0% | |
| AGATGACAGGGATCATGGAA+GGG | + | chr8.3:20150312-20150331 | MS.gene71945:intron | 45.0% | |
| AGCTTGATGAACGTGAAAGG+AGG | + | chr8.3:20150116-20150135 | MS.gene71945:CDS | 45.0% | |
| ATTCCCCACCTGAAATTGCA+AGG | - | chr8.3:20149794-20149813 | None:intergenic | 45.0% | |
| CCAAATGACCTATGGGAAAC+TGG | - | chr8.3:20150757-20150776 | None:intergenic | 45.0% | |
| CCAGTTTCCCATAGGTCATT+TGG | + | chr8.3:20150754-20150773 | MS.gene71945:intron | 45.0% | |
| CCATGCTTTGACAGATGACA+GGG | + | chr8.3:20150300-20150319 | MS.gene71945:intron | 45.0% | |
| CCTGCAACCAAATGACCTAT+GGG | - | chr8.3:20150764-20150783 | None:intergenic | 45.0% | |
| CGCATACCAACGTGATAACA+TGG | - | chr8.3:20150010-20150029 | None:intergenic | 45.0% | |
| CTCGAACAGTAGTGCACAAT+TGG | + | chr8.3:20152065-20152084 | MS.gene71945:intron | 45.0% | |
| CTGCCCGTCTTTCCTATAAA+AGG | - | chr8.3:20150056-20150075 | None:intergenic | 45.0% | |
| GCAGGAACAACAACAACAAG+AGG | + | chr8.3:20151585-20151604 | MS.gene71945:intron | 45.0% | |
| GGCATTCCCTCGTACATTAT+GGG | - | chr8.3:20149884-20149903 | None:intergenic | 45.0% | |
| GTAGTGCAATGGTCAAATGG+CGG | - | chr8.3:20151954-20151973 | None:intergenic | 45.0% | |
| GTGTTCAAAAATCAAGCCCG+TGG | + | chr8.3:20152234-20152253 | MS.gene71945:CDS | 45.0% | |
| GTTCATCAAGCTCATCACGT+AGG | - | chr8.3:20150108-20150127 | None:intergenic | 45.0% | |
| TCCATGCTTTGACAGATGAC+AGG | + | chr8.3:20150299-20150318 | MS.gene71945:intron | 45.0% | |
| TCCTCCTTCTATCCTAAGAG+AGG | - | chr8.3:20151212-20151231 | None:intergenic | 45.0% | |
| TCCTGCAACCAAATGACCTA+TGG | - | chr8.3:20150765-20150784 | None:intergenic | 45.0% | |
| TCTATTGGCCAGTTTCCCAT+AGG | + | chr8.3:20150746-20150765 | MS.gene71945:intron | 45.0% | |
| TGCTTGACCCTTGCAATTTC+AGG | + | chr8.3:20149783-20149802 | MS.gene71945:intron | 45.0% | |
| TGGCATTCCCTCGTACATTA+TGG | - | chr8.3:20149885-20149904 | None:intergenic | 45.0% | |
| TTACCCTTTGCAATTGAGGG+GGG | - | chr8.3:20149847-20149866 | None:intergenic | 45.0% | |
| TTCCCCACCTGAAATTGCAA+GGG | - | chr8.3:20149793-20149812 | None:intergenic | 45.0% | |
| TTGACAGATGACAGGGATCA+TGG | + | chr8.3:20150307-20150326 | MS.gene71945:intron | 45.0% | |
| TTGACCCTTGCAATTTCAGG+TGG | + | chr8.3:20149786-20149805 | MS.gene71945:intron | 45.0% | |
| ! | CAAGGCGGTACTCGAATTTT+CGG | + | chr8.3:20149028-20149047 | MS.gene71945:CDS | 45.0% |
| ! | CTTTTATAGGAAAGACGGGC+AGG | + | chr8.3:20150054-20150073 | MS.gene71945:intron | 45.0% |
| ! | GTATAGGTGGGATGATGATG+TGG | + | chr8.3:20152212-20152231 | MS.gene71945:intron | 45.0% |
| ! | TGACCCTTGCAATTTCAGGT+GGG | + | chr8.3:20149787-20149806 | MS.gene71945:intron | 45.0% |
| ! | TGCAATTTCAGGTGGGGAAT+TGG | + | chr8.3:20149794-20149813 | MS.gene71945:intron | 45.0% |
| ! | TTTTGTGAGCCTAGCATCTC+TGG | + | chr8.3:20150890-20150909 | MS.gene71945:intron | 45.0% |
| !!! | GGCGGCCATCTATTTTTAGA+AGG | + | chr8.3:20150334-20150353 | MS.gene71945:CDS | 45.0% |
| AGAGAGCGGAGGGTTAGAAA+AGG | - | chr8.3:20149940-20149959 | None:intergenic | 50.0% | |
| CACCACTCTCAAACCTAGGT+AGG | + | chr8.3:20149090-20149109 | MS.gene71945:intron | 50.0% | |
| CAGATGACAGGGATCATGGA+AGG | + | chr8.3:20150311-20150330 | MS.gene71945:intron | 50.0% | |
| CCCATAGGTCATTTGGTTGC+AGG | + | chr8.3:20150761-20150780 | MS.gene71945:intron | 50.0% | |
| CCCTGTCATCTGTCAAAGCA+TGG | - | chr8.3:20150303-20150322 | None:intergenic | 50.0% | |
| CTCCCTGAAATTGTTGGGGT+CGG | + | chr8.3:20149523-20149542 | MS.gene71945:intron | 50.0% | |
| GAGAGCGGAGGGTTAGAAAA+GGG | - | chr8.3:20149939-20149958 | None:intergenic | 50.0% | |
| GATGAATCGCTTTGCGAGCT+TGG | - | chr8.3:20152265-20152284 | None:intergenic | 50.0% | |
| GATGACAGGGATCATGGAAG+GGG | + | chr8.3:20150313-20150332 | MS.gene71945:intron | 50.0% | |
| GCCAAAGGTGGAAACGAACA+AGG | + | chr8.3:20149010-20149029 | MS.gene71945:CDS | 50.0% | |
| GGATGACACTGAAGCTTTGC+TGG | + | chr8.3:20151058-20151077 | MS.gene71945:CDS | 50.0% | |
| GTGGTCGTAACACCTCTCTT+AGG | + | chr8.3:20151197-20151216 | MS.gene71945:intron | 50.0% | |
| TCATCTGCATCAACACTGCG+TGG | - | chr8.3:20150535-20150554 | None:intergenic | 50.0% | |
| TCCCTGAAATTGTTGGGGTC+GGG | + | chr8.3:20149524-20149543 | MS.gene71945:intron | 50.0% | |
| TGTTCGTTTCCACCTTTGGC+CGG | - | chr8.3:20149010-20149029 | None:intergenic | 50.0% | |
| TTGCGAGCTTGGTTTCTCCA+CGG | - | chr8.3:20152254-20152273 | None:intergenic | 50.0% | |
| TTGGGGGGAAAAACCTACCT+AGG | - | chr8.3:20149106-20149125 | None:intergenic | 50.0% | |
| ! | GACCCTTGCAATTTCAGGTG+GGG | + | chr8.3:20149788-20149807 | MS.gene71945:intron | 50.0% |
| ! | GCCTTGTTCGTTTCCACCTT+TGG | - | chr8.3:20149014-20149033 | None:intergenic | 50.0% |
| AAGGAGGCAGAGCTTATGCG+TGG | + | chr8.3:20151622-20151641 | MS.gene71945:CDS | 55.0% | |
| CCACCCCCCTCAATTGCAAA+GGG | + | chr8.3:20149841-20149860 | MS.gene71945:intron | 55.0% | |
| CCTTTGCAATTGAGGGGGGT+GGG | - | chr8.3:20149843-20149862 | None:intergenic | 55.0% | |
| CGCACACCACTCTCAAACCT+AGG | + | chr8.3:20149086-20149105 | MS.gene71945:CDS | 55.0% | |
| CTTTGCAATTGAGGGGGGTG+GGG | - | chr8.3:20149842-20149861 | None:intergenic | 55.0% | |
| GAAAGACGGGCAGGATACAC+AGG | + | chr8.3:20150063-20150082 | MS.gene71945:CDS | 55.0% | |
| GCCCGACCCCAACAATTTCA+GGG | - | chr8.3:20149528-20149547 | None:intergenic | 55.0% | |
| TGCCCGACCCCAACAATTTC+AGG | - | chr8.3:20149529-20149548 | None:intergenic | 55.0% | |
| TGCGAGCTTGGTTTCTCCAC+GGG | - | chr8.3:20152253-20152272 | None:intergenic | 55.0% | |
| TTTGCAATTGAGGGGGGTGG+GGG | - | chr8.3:20149841-20149860 | None:intergenic | 55.0% | |
| ! | CAGTGATGACGACGACGATG+AGG | + | chr8.3:20151037-20151056 | MS.gene71945:intron | 55.0% |
| CCCACCCCCCTCAATTGCAA+AGG | + | chr8.3:20149840-20149859 | MS.gene71945:intron | 60.0% | |
| CCCTTTGCAATTGAGGGGGG+TGG | - | chr8.3:20149844-20149863 | None:intergenic | 60.0% | |
| CGCTAGACCAACATGGGCAC+CGG | + | chr8.3:20148988-20149007 | MS.gene71945:CDS | 60.0% | |
| GACAGGGATCATGGAAGGGG+CGG | + | chr8.3:20150316-20150335 | MS.gene71945:CDS | 60.0% | |
| GACCGCCGCTAGACCAACAT+GGG | + | chr8.3:20148982-20149001 | MS.gene71945:CDS | 60.0% | |
| GGCACAGGAAAAGCTGCGCA+AGG | + | chr8.3:20151109-20151128 | MS.gene71945:CDS | 60.0% | |
| ! | CGGTGCCCATGTTGGTCTAG+CGG | - | chr8.3:20148990-20149009 | None:intergenic | 60.0% |
| ! | TGCCCATGTTGGTCTAGCGG+CGG | - | chr8.3:20148987-20149006 | None:intergenic | 60.0% |
| CCTTTGGCCGGTGCCCATGT+TGG | - | chr8.3:20148998-20149017 | None:intergenic | 65.0% | |
| CGACCGCCGCTAGACCAACA+TGG | + | chr8.3:20148981-20149000 | MS.gene71945:CDS | 65.0% | |
| !! | ACATGGGCACCGGCCAAAGG+TGG | + | chr8.3:20148998-20149017 | MS.gene71945:CDS | 65.0% |
| !! | CCAACATGGGCACCGGCCAA+AGG | + | chr8.3:20148995-20149014 | MS.gene71945:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 20148977 | 20152341 | 20148977 | ID=MS.gene71945 |
| chr8.3 | mRNA | 20148977 | 20152341 | 20148977 | ID=MS.gene71945.t1;Parent=MS.gene71945 |
| chr8.3 | exon | 20148977 | 20149107 | 20148977 | ID=MS.gene71945.t1.exon1;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20148977 | 20149107 | 20148977 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20150063 | 20150169 | 20150063 | ID=MS.gene71945.t1.exon2;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20150063 | 20150169 | 20150063 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20150314 | 20150355 | 20150314 | ID=MS.gene71945.t1.exon3;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20150314 | 20150355 | 20150314 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20150500 | 20150587 | 20150500 | ID=MS.gene71945.t1.exon4;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20150500 | 20150587 | 20150500 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20151040 | 20151130 | 20151040 | ID=MS.gene71945.t1.exon5;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20151040 | 20151130 | 20151040 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20151589 | 20151689 | 20151589 | ID=MS.gene71945.t1.exon6;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20151589 | 20151689 | 20151589 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| chr8.3 | exon | 20152218 | 20152341 | 20152218 | ID=MS.gene71945.t1.exon7;Parent=MS.gene71945.t1 |
| chr8.3 | CDS | 20152218 | 20152341 | 20152218 | ID=cds.MS.gene71945.t1;Parent=MS.gene71945.t1 |
| Gene Sequence |
| Protein sequence |
