Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066746.t1 | XP_003595777.1 | 99.3 | 435 | 3 | 0 | 1 | 435 | 1 | 435 | 1.60E-245 | 858.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066746.t1 | Q08A72 | 55.0 | 436 | 176 | 9 | 1 | 424 | 1 | 428 | 1.8e-120 | 434.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066746.t1 | G7IJ02 | 99.3 | 435 | 3 | 0 | 1 | 435 | 1 | 435 | 1.2e-245 | 858.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene066746 | 0.831128 | 1.99E-55 | -1.69E-46 |
| MS.gene04918 | MS.gene066746 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene066746 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene049283 | MS.gene066746 | 0.853144 | 2.90E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene066746 | 0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene066746 | 0.847431 | 1.16E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene066746 | 0.866312 | 3.13E-65 | -1.69E-46 |
| MS.gene050213 | MS.gene066746 | 0.801336 | 9.45E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene066746 | 0.855569 | 5.78E-62 | -1.69E-46 |
| MS.gene050654 | MS.gene066746 | 0.836035 | 1.18E-56 | -1.69E-46 |
| MS.gene050759 | MS.gene066746 | 0.824739 | 6.86E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene066746 | 0.815451 | 9.19E-52 | -1.69E-46 |
| MS.gene050962 | MS.gene066746 | 0.812036 | 5.19E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene066746 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene066746 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene051365 | MS.gene066746 | 0.805392 | 1.36E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene066746 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene066746 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene066746 | 0.849369 | 3.38E-60 | -1.69E-46 |
| MS.gene052016 | MS.gene066746 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene066746 | 0.816845 | 4.48E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene066746 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene066746 | 0.825821 | 3.80E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene066746 | 0.868318 | 7.14E-66 | -1.69E-46 |
| MS.gene052516 | MS.gene066746 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene066746 | 0.838693 | 2.47E-57 | -1.69E-46 |
| MS.gene052534 | MS.gene066746 | 0.807966 | 3.90E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene066746 | 0.82791 | 1.20E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene066746 | 0.816647 | 4.96E-52 | -1.69E-46 |
| MS.gene052776 | MS.gene066746 | 0.814259 | 1.69E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene066746 | 0.838159 | 3.39E-57 | -1.69E-46 |
| MS.gene053058 | MS.gene066746 | 0.801038 | 1.09E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene066746 | 0.830716 | 2.51E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene066746 | 0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene053620 | MS.gene066746 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene066746 | 0.805136 | 1.54E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene066746 | 0.822455 | 2.35E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene066746 | 0.858361 | 8.68E-63 | -1.69E-46 |
| MS.gene05458 | MS.gene066746 | 0.823545 | 1.31E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene066746 | 0.843753 | 1.15E-58 | -1.69E-46 |
| MS.gene054709 | MS.gene066746 | 0.829907 | 3.96E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene066746 | 0.840555 | 8.10E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene066746 | 0.838855 | 2.24E-57 | -1.69E-46 |
| MS.gene054957 | MS.gene066746 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene066746 | 0.808818 | 2.57E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene066746 | 0.869283 | 3.48E-66 | -1.69E-46 |
| MS.gene055841 | MS.gene066746 | 0.826496 | 2.63E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene066746 | 0.833409 | 5.42E-56 | -1.69E-46 |
| MS.gene056045 | MS.gene066746 | 0.849068 | 4.10E-60 | -1.69E-46 |
| MS.gene056174 | MS.gene066746 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene066746 | 0.821297 | 4.35E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene066746 | 0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene066746 | 0.815335 | 9.75E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene066746 | 0.851278 | 9.85E-61 | -1.69E-46 |
| MS.gene056776 | MS.gene066746 | 0.818716 | 1.70E-52 | -1.69E-46 |
| MS.gene056825 | MS.gene066746 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene066746 | 0.854043 | 1.60E-61 | -1.69E-46 |
| MS.gene05690 | MS.gene066746 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene066746 | 0.827514 | 1.50E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene066746 | 0.829885 | 4.01E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene066746 | 0.853208 | 2.78E-61 | -1.69E-46 |
| MS.gene057102 | MS.gene066746 | 0.867179 | 1.66E-65 | -1.69E-46 |
| MS.gene057155 | MS.gene066746 | 0.857952 | 1.15E-62 | -1.69E-46 |
| MS.gene057174 | MS.gene066746 | 0.801003 | 1.11E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene066746 | 0.850638 | 1.49E-60 | -1.69E-46 |
| MS.gene057611 | MS.gene066746 | 0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene066746 | 0.806274 | 8.91E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene066746 | 0.80167 | 8.07E-49 | -1.69E-46 |
| MS.gene058279 | MS.gene066746 | 0.806426 | 8.27E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene066746 | 0.806913 | 6.53E-50 | -1.69E-46 |
| MS.gene058292 | MS.gene066746 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene058681 | MS.gene066746 | 0.816909 | 4.34E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene066746 | 0.814085 | 1.84E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene066746 | 0.805631 | 1.22E-49 | -1.69E-46 |
| MS.gene05897 | MS.gene066746 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene059144 | MS.gene066746 | 0.809811 | 1.57E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene066746 | 0.809691 | 1.67E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene066746 | -0.839904 | 1.20E-57 | -1.69E-46 |
| MS.gene059965 | MS.gene066746 | 0.830457 | 2.91E-55 | -1.69E-46 |
| MS.gene060259 | MS.gene066746 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene066746 | 0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene066746 | 0.821252 | 4.46E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene066746 | 0.809355 | 1.97E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene066746 | 0.879488 | 1.20E-69 | -1.69E-46 |
| MS.gene060935 | MS.gene066746 | 0.86261 | 4.49E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene066746 | 0.871855 | 4.97E-67 | -1.69E-46 |
| MS.gene061100 | MS.gene066746 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene061135 | MS.gene066746 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene066746 | 0.817104 | 3.92E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066746.t1 | MTR_2g060720 | 99.310 | 435 | 3 | 0 | 1 | 435 | 1 | 435 | 0.0 | 879 |
| MS.gene066746.t1 | MTR_2g060720 | 96.991 | 432 | 13 | 0 | 1 | 432 | 1 | 432 | 0.0 | 855 |
| MS.gene066746.t1 | MTR_4g022860 | 78.360 | 439 | 85 | 6 | 1 | 435 | 1 | 433 | 0.0 | 652 |
| MS.gene066746.t1 | MTR_1g053905 | 52.821 | 390 | 125 | 8 | 51 | 434 | 1 | 337 | 1.81e-126 | 370 |
| MS.gene066746.t1 | MTR_4g100880 | 41.026 | 390 | 116 | 9 | 47 | 434 | 7 | 284 | 8.28e-77 | 241 |
| MS.gene066746.t1 | MTR_7g086660 | 45.055 | 91 | 42 | 1 | 49 | 139 | 19 | 101 | 1.92e-18 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066746.t1 | AT2G44440 | 56.266 | 391 | 157 | 8 | 41 | 424 | 45 | 428 | 3.44e-146 | 423 |
| MS.gene066746.t1 | AT5G13020 | 56.265 | 423 | 152 | 10 | 1 | 419 | 1 | 394 | 2.56e-145 | 420 |
| MS.gene066746.t1 | AT5G13020 | 57.718 | 298 | 100 | 7 | 1 | 297 | 1 | 273 | 5.74e-102 | 305 |
| MS.gene066746.t1 | AT5G13020 | 57.534 | 292 | 98 | 7 | 1 | 291 | 1 | 267 | 3.03e-98 | 297 |
| MS.gene066746.t1 | AT3G12140 | 48.404 | 376 | 127 | 9 | 51 | 421 | 1 | 314 | 1.11e-92 | 283 |
| MS.gene066746.t1 | AT3G12140 | 48.404 | 376 | 127 | 9 | 51 | 421 | 1 | 314 | 1.11e-92 | 283 |
| MS.gene066746.t1 | AT5G06780 | 43.700 | 373 | 139 | 7 | 49 | 421 | 6 | 307 | 3.10e-88 | 271 |
| MS.gene066746.t1 | AT3G12140 | 48.128 | 374 | 125 | 10 | 51 | 418 | 1 | 311 | 3.28e-88 | 273 |
| MS.gene066746.t1 | AT5G06780 | 43.666 | 371 | 138 | 7 | 51 | 421 | 1 | 300 | 1.96e-87 | 269 |
Find 130 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATCAGCTTGAGCTTTAA+AGG | 0.189479 | 2.2:+28362442 | None:intergenic |
| TGCTTCTTGCCCTTAGTTCC+TGG | 0.202762 | 2.2:+28361875 | None:intergenic |
| CAGCCCAGTGTGCTGAGTTC+TGG | 0.291340 | 2.2:-28362073 | MS.gene066746:CDS |
| CCTAGAGGGGCACGTCTTGC+TGG | 0.293075 | 2.2:-28362578 | MS.gene066746:CDS |
| GGTGGGGTGCAGCGACAGGC+TGG | 0.316850 | 2.2:+28361933 | None:intergenic |
| CCTGGAATCAACCATCGTTT+TGG | 0.329010 | 2.2:-28359845 | MS.gene066746:CDS |
| AATAAAGCAATACCCTTCTT+CGG | 0.340861 | 2.2:-28361658 | MS.gene066746:CDS |
| CTCAAGCTGATGCCATTACT+TGG | 0.350686 | 2.2:-28362433 | MS.gene066746:CDS |
| GATCTTTCTGATGGCGATAA+TGG | 0.357677 | 2.2:-28359329 | MS.gene066746:intron |
| GTAGGTCGTGATAGTGTTCC+AGG | 0.364041 | 2.2:-28359794 | MS.gene066746:CDS |
| GAGGAACATAGGGAACTTCT+AGG | 0.365417 | 2.2:-28362270 | MS.gene066746:CDS |
| GTCAATTTCACCGTACATCC+TGG | 0.372915 | 2.2:+28362520 | None:intergenic |
| GGGGCACGTCTTGCTGGGAA+TGG | 0.373208 | 2.2:-28362572 | MS.gene066746:CDS |
| TGCTTTATTGAAGGCGCTCC+TGG | 0.375110 | 2.2:+28361672 | None:intergenic |
| GATCTGGTCGTGGGTTGAAT+AGG | 0.379332 | 2.2:-28359820 | MS.gene066746:CDS |
| GTACCCGAAGTAACTCTATT+AGG | 0.380380 | 2.2:+28361612 | None:intergenic |
| TTGCCCTTAGTTCCTGGAAC+AGG | 0.381177 | 2.2:+28361881 | None:intergenic |
| TTCTCAATTTCATGTACATC+AGG | 0.383976 | 2.2:+28359525 | None:intergenic |
| GTGGGGTGCAGCGACAGGCT+GGG | 0.384020 | 2.2:+28361934 | None:intergenic |
| CCAAAACGATGGTTGATTCC+AGG | 0.388750 | 2.2:+28359845 | None:intergenic |
| CCCCTACCTCTTCCAGCTCC+TGG | 0.389953 | 2.2:+28359776 | None:intergenic |
| TTGATTTAACATGTGAGAAA+TGG | 0.395327 | 2.2:+28358708 | None:intergenic |
| ATAAAGCAATACCCTTCTTC+GGG | 0.395622 | 2.2:-28361657 | MS.gene066746:CDS |
| GGCTGGTGGGGTGCAGCGAC+AGG | 0.401746 | 2.2:+28361929 | None:intergenic |
| TTTCTCACATGTTAAATCAA+TGG | 0.415277 | 2.2:-28358705 | MS.gene066746:CDS |
| GGAAAACGTGGACCTGTTCC+AGG | 0.422832 | 2.2:-28361893 | MS.gene066746:CDS |
| TGGGGTGCAGCGACAGGCTG+GGG | 0.430935 | 2.2:+28361935 | None:intergenic |
| GGGAAGTGTAAATGAATCAT+TGG | 0.431698 | 2.2:-28361356 | MS.gene066746:CDS |
| TCATAGAAGTTATTGTCATC+AGG | 0.439972 | 2.2:+28361519 | None:intergenic |
| GGGCACGTCTTGCTGGGAAT+GGG | 0.448749 | 2.2:-28362571 | MS.gene066746:CDS |
| AGAGGTAGGGGAGGTACAAA+GGG | 0.450148 | 2.2:-28359764 | MS.gene066746:CDS |
| TTGCCATCACAGAATGGAAT+CGG | 0.451792 | 2.2:-28359722 | MS.gene066746:CDS |
| CGTGATAGTGTTCCAGGAGC+TGG | 0.451941 | 2.2:-28359788 | MS.gene066746:CDS |
| CACCAGCCATCTTCTTCTGT+TGG | 0.456682 | 2.2:-28361914 | MS.gene066746:CDS |
| CAATACCCTTCTTCGGGACC+AGG | 0.459640 | 2.2:-28361651 | MS.gene066746:CDS |
| CGGAAGATATTCAATGGGTA+GGG | 0.460464 | 2.2:-28359874 | MS.gene066746:CDS |
| GAAGGGTATTGCTTTATTGA+AGG | 0.463108 | 2.2:+28361663 | None:intergenic |
| GATTATCAAATGAGGAACAT+AGG | 0.464821 | 2.2:-28362281 | MS.gene066746:CDS |
| TGTAAATGAATCATTGGAAT+GGG | 0.466303 | 2.2:-28361350 | MS.gene066746:CDS |
| ATTATCAAATGAGGAACATA+GGG | 0.470814 | 2.2:-28362280 | MS.gene066746:CDS |
| GGGTAACTTGTCAGGTGGAA+AGG | 0.475104 | 2.2:-28359566 | MS.gene066746:intron |
| CACAGACACACTAGTTAAAG+AGG | 0.478328 | 2.2:-28359666 | MS.gene066746:intron |
| TCTCTCCGGAAGATATTCAA+TGG | 0.483434 | 2.2:-28359880 | MS.gene066746:CDS |
| CCAGGAGCTGGAAGAGGTAG+GGG | 0.486141 | 2.2:-28359776 | MS.gene066746:CDS |
| TCCGTACCATCACAATCTTA+TGG | 0.486303 | 2.2:-28361980 | MS.gene066746:CDS |
| TGGACCTGTTCCAGGAACTA+AGG | 0.487227 | 2.2:-28361885 | MS.gene066746:CDS |
| GTGTAAATGAATCATTGGAA+TGG | 0.491091 | 2.2:-28361351 | MS.gene066746:CDS |
| TTAAGGGAGTGGAGACAGAC+AGG | 0.491451 | 2.2:-28362103 | MS.gene066746:intron |
| GAAAGCCAAGAAAATATTGA+AGG | 0.498578 | 2.2:-28359505 | MS.gene066746:intron |
| GTACCTAATAGAGTTACTTC+GGG | 0.499309 | 2.2:-28361615 | MS.gene066746:CDS |
| CCTACCCATTGAATATCTTC+CGG | 0.502345 | 2.2:+28359875 | None:intergenic |
| CTAGAGGGGCACGTCTTGCT+GGG | 0.503115 | 2.2:-28362577 | MS.gene066746:CDS |
| GGTAACTTGTCAGGTGGAAA+GGG | 0.504129 | 2.2:-28359565 | MS.gene066746:intron |
| GTGGATGTAAGTACATCTAC+TGG | 0.505198 | 2.2:+28361474 | None:intergenic |
| GAAGCAGAGACTGTTGGACT+TGG | 0.505403 | 2.2:+28362028 | None:intergenic |
| TCCAGGAGCTGGAAGAGGTA+GGG | 0.508269 | 2.2:-28359777 | MS.gene066746:CDS |
| AATAGAGTTACTTCGGGTAC+TGG | 0.508423 | 2.2:-28361609 | MS.gene066746:CDS |
| TTACGAGAAGCAGAGACTGT+TGG | 0.510483 | 2.2:+28362022 | None:intergenic |
| AACTCAGCACACTGGGCTGA+TGG | 0.513722 | 2.2:+28362077 | None:intergenic |
| TCAATTTCACCGTACATCCT+GGG | 0.514345 | 2.2:+28362521 | None:intergenic |
| CCAGCAAGACGTGCCCCTCT+AGG | 0.514854 | 2.2:+28362578 | None:intergenic |
| AGTACCTAATAGAGTTACTT+CGG | 0.516275 | 2.2:-28361616 | MS.gene066746:CDS |
| TTTCCGATTCCATTCTGTGA+TGG | 0.519534 | 2.2:+28359719 | None:intergenic |
| CAATGGGTAGGGGAGGAACC+TGG | 0.520661 | 2.2:-28359863 | MS.gene066746:CDS |
| AAGAAAATGTACCCAAGTAA+TGG | 0.521418 | 2.2:+28362421 | None:intergenic |
| GATTTATTGCCATCACAGAA+TGG | 0.526792 | 2.2:-28359728 | MS.gene066746:CDS |
| TGCTTCTCGTAAGAAGCAAA+AGG | 0.528673 | 2.2:-28362011 | MS.gene066746:CDS |
| GTTACTTCGGGTACTGGCAC+AGG | 0.529579 | 2.2:-28361603 | MS.gene066746:CDS |
| AAGGCGCTCCTGGTAATACT+TGG | 0.530709 | 2.2:+28361682 | None:intergenic |
| CTCTCCGGAAGATATTCAAT+GGG | 0.530818 | 2.2:-28359879 | MS.gene066746:CDS |
| TTCCAACAGAAGAAGATGGC+TGG | 0.531524 | 2.2:+28361912 | None:intergenic |
| TGTCCAGAACTCAGCACACT+GGG | 0.531670 | 2.2:+28362070 | None:intergenic |
| CGTACTTTCTTGCCAACGAG+CGG | 0.536223 | 2.2:+28361552 | None:intergenic |
| CACAATCTGGTCTATGACAT+GGG | 0.537543 | 2.2:-28361376 | MS.gene066746:CDS |
| CTTGTAACCGCAGATCTCTC+CGG | 0.540537 | 2.2:-28359894 | MS.gene066746:intron |
| ACAGGCTGGGGATGAAATGA+AGG | 0.541107 | 2.2:+28361947 | None:intergenic |
| AGTGTTCCAGGAGCTGGAAG+AGG | 0.541350 | 2.2:-28359782 | MS.gene066746:CDS |
| ATGTCATACCCCAGGATGTA+CGG | 0.542230 | 2.2:-28362530 | MS.gene066746:CDS |
| TCAAATTCACCAACTTGAGC+AGG | 0.543941 | 2.2:-28362489 | MS.gene066746:CDS |
| AAGAGGTAGGGGAGGTACAA+AGG | 0.547461 | 2.2:-28359765 | MS.gene066746:CDS |
| ACCATAAGATTGTGATGGTA+CGG | 0.550660 | 2.2:+28361979 | None:intergenic |
| CCGGAAGATATTCAATGGGT+AGG | 0.552057 | 2.2:-28359875 | MS.gene066746:CDS |
| ATCAAAATAGAATTCCTAGA+GGG | 0.552953 | 2.2:-28362592 | MS.gene066746:CDS |
| CGTGGGTTGAATAGGTCTGT+AGG | 0.562784 | 2.2:-28359812 | MS.gene066746:CDS |
| ACAGAAGAAGATGGCTGGTG+GGG | 0.563016 | 2.2:+28361917 | None:intergenic |
| TCTTCTTCTGTTGGAAAACG+TGG | 0.568821 | 2.2:-28361905 | MS.gene066746:CDS |
| ATGTCCAGAACTCAGCACAC+TGG | 0.569046 | 2.2:+28362069 | None:intergenic |
| TGGGGATGAAATGAAGGAGA+AGG | 0.571735 | 2.2:+28361953 | None:intergenic |
| GAGGTAGGGGAGGTACAAAG+GGG | 0.571827 | 2.2:-28359763 | MS.gene066746:CDS |
| AGGCTTGCAGATCTTTCTGA+TGG | 0.572035 | 2.2:-28359338 | MS.gene066746:CDS |
| AAGCTTACCACTACTATCGT+AGG | 0.572056 | 2.2:+28363986 | None:intergenic |
| AACAGAAGAAGATGGCTGGT+GGG | 0.578561 | 2.2:+28361916 | None:intergenic |
| GCATCAATTGATCCGCTCGT+TGG | 0.579774 | 2.2:-28361564 | MS.gene066746:CDS |
| ATGATGTCATACGAAGGATA+AGG | 0.581095 | 2.2:-28362233 | MS.gene066746:intron |
| AGAACTAAGATTATCAAATG+AGG | 0.581607 | 2.2:-28362289 | MS.gene066746:CDS |
| TAGGTTCGATGTCATACCCC+AGG | 0.585808 | 2.2:-28362538 | MS.gene066746:CDS |
| CTCTTATCGATGCAATTGCA+AGG | 0.587215 | 2.2:-28359358 | MS.gene066746:CDS |
| ATGCAGGGCCAAGTATTACC+AGG | 0.589351 | 2.2:-28361690 | MS.gene066746:intron |
| CAACAGAAGAAGATGGCTGG+TGG | 0.590040 | 2.2:+28361915 | None:intergenic |
| AATACCCTTCTTCGGGACCA+GGG | 0.590984 | 2.2:-28361650 | MS.gene066746:CDS |
| GGCACAGGTGAGCTTGCTGA+GGG | 0.592343 | 2.2:-28361588 | MS.gene066746:CDS |
| TACCATCACAATCTTATGGT+GGG | 0.594162 | 2.2:-28361976 | MS.gene066746:CDS |
| TGGCACAGGTGAGCTTGCTG+AGG | 0.594365 | 2.2:-28361589 | MS.gene066746:CDS |
| GCACAATCTGGTCTATGACA+TGG | 0.596902 | 2.2:-28361377 | MS.gene066746:CDS |
| GGGAATGGGCGATCTGCAGT+AGG | 0.597765 | 2.2:-28362557 | MS.gene066746:CDS |
| TACATCTACTGGATTGTAGT+CGG | 0.599461 | 2.2:+28361485 | None:intergenic |
| TTCCAGGAGCTGGAAGAGGT+AGG | 0.602194 | 2.2:-28359778 | MS.gene066746:CDS |
| GCAAGAAAGTACGAACAAGA+TGG | 0.604041 | 2.2:-28361542 | MS.gene066746:CDS |
| AGCTTACCACTACTATCGTA+GGG | 0.609764 | 2.2:+28363987 | None:intergenic |
| TATACGCGTCCTGCTCAAGT+TGG | 0.614385 | 2.2:+28362480 | None:intergenic |
| TCAAGCTGATGCCATTACTT+GGG | 0.618960 | 2.2:-28362432 | MS.gene066746:intron |
| AGATATTCAATGGGTAGGGG+AGG | 0.622945 | 2.2:-28359870 | MS.gene066746:CDS |
| AATCAATGGATCGAGAATGA+CGG | 0.632089 | 2.2:-28358691 | None:intergenic |
| GGAAGATATTCAATGGGTAG+GGG | 0.632331 | 2.2:-28359873 | MS.gene066746:CDS |
| GGAGCTGGAAGAGGTAGGGG+AGG | 0.633167 | 2.2:-28359773 | MS.gene066746:CDS |
| ATACCCTTCTTCGGGACCAG+GGG | 0.638170 | 2.2:-28361649 | MS.gene066746:CDS |
| GGACCTGTTCCAGGAACTAA+GGG | 0.641860 | 2.2:-28361884 | MS.gene066746:CDS |
| CAATTTCACCGTACATCCTG+GGG | 0.645515 | 2.2:+28362522 | None:intergenic |
| GGCCCACCATAAGATTGTGA+TGG | 0.650903 | 2.2:+28361974 | None:intergenic |
| TAAGATTGTGATGGTACGGA+CGG | 0.655045 | 2.2:+28361983 | None:intergenic |
| TACCCTTCTTCGGGACCAGG+GGG | 0.660578 | 2.2:-28361648 | MS.gene066746:CDS |
| TGACATCATCTGCATTAACA+CGG | 0.665820 | 2.2:+28362247 | None:intergenic |
| GGAATGGGTTAATCTGTCAG+AGG | 0.668396 | 2.2:-28361335 | MS.gene066746:intron |
| GTACCATCACAATCTTATGG+TGG | 0.670093 | 2.2:-28361977 | MS.gene066746:CDS |
| TACGAACCCTACGATAGTAG+TGG | 0.670182 | 2.2:-28363993 | MS.gene066746:intron |
| TCAAAATAGAATTCCTAGAG+GGG | 0.671510 | 2.2:-28362591 | MS.gene066746:CDS |
| CATCAAAATAGAATTCCTAG+AGG | 0.671706 | 2.2:-28362593 | MS.gene066746:CDS |
| GATGTACGGTGAAATTGACA+TGG | 0.674935 | 2.2:-28362516 | MS.gene066746:CDS |
| AGGGAGTGGAGACAGACAGG+AGG | 0.700855 | 2.2:-28362100 | MS.gene066746:CDS |
| ATGCAGATGATGTCATACGA+AGG | 0.702583 | 2.2:-28362239 | MS.gene066746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAGATTGAAAATTT+AGG | + | chr2.2:28358771-28358790 | None:intergenic | 10.0% |
| !!! | AAATTTTCAATCTTTTTTAA+TGG | - | chr2.2:28358771-28358790 | MS.gene066746:intron | 10.0% |
| !!! | AATTACATATTATTTTTACA+TGG | + | chr2.2:28362596-28362615 | None:intergenic | 10.0% |
| !!! | AATTTTCAATCTTTTTTAAT+GGG | - | chr2.2:28358772-28358791 | MS.gene066746:intron | 10.0% |
| !!! | GGAAAATATTTAAATTTTTT+GGG | - | chr2.2:28363107-28363126 | MS.gene066746:intron | 10.0% |
| !!! | TATTTTGAAAATTTTTAATC+AGG | - | chr2.2:28360313-28360332 | MS.gene066746:intron | 10.0% |
| !!! | TGGAAAATATTTAAATTTTT+TGG | - | chr2.2:28363106-28363125 | MS.gene066746:intron | 10.0% |
| !! | TAAATTGTTAAATTAGGATT+TGG | - | chr2.2:28362355-28362374 | MS.gene066746:intron | 15.0% |
| !! | TCTAATGTAATAATTTCTTT+AGG | - | chr2.2:28361930-28361949 | MS.gene066746:CDS | 15.0% |
| !!! | GCATTTTAATTTTAATTTAG+AGG | + | chr2.2:28363462-28363481 | None:intergenic | 15.0% |
| !!! | TGAAGTATTTTTTTTTTCTA+TGG | - | chr2.2:28359105-28359124 | MS.gene066746:intron | 15.0% |
| !!! | TGTTTTGATTGATTTAATTA+GGG | - | chr2.2:28358829-28358848 | MS.gene066746:intron | 15.0% |
| !!! | TTGTTTTGATTGATTTAATT+AGG | - | chr2.2:28358828-28358847 | MS.gene066746:intron | 15.0% |
| !! | AAGAACATAAGATAAATTAG+CGG | + | chr2.2:28363260-28363279 | None:intergenic | 20.0% |
| !! | AATTAAAATGCTATGAAGTA+TGG | - | chr2.2:28363471-28363490 | MS.gene066746:intron | 20.0% |
| !! | ATAGACAAAAGTGAAAAATA+TGG | + | chr2.2:28363791-28363810 | None:intergenic | 20.0% |
| !! | ATAGCATAAAACTACTAATT+TGG | + | chr2.2:28358874-28358893 | None:intergenic | 20.0% |
| !! | ATCAATTATATTCAGTGAAA+TGG | - | chr2.2:28363870-28363889 | MS.gene066746:intron | 20.0% |
| !! | ATCTTATTGTTTATACAGAT+GGG | - | chr2.2:28363954-28363973 | MS.gene066746:intron | 20.0% |
| !! | ATCTTTATTAGAAAGAACTA+GGG | + | chr2.2:28362105-28362124 | None:intergenic | 20.0% |
| !! | CAATTTAATGAATTAACTAC+AGG | - | chr2.2:28363300-28363319 | MS.gene066746:intron | 20.0% |
| !! | GTGAAATTTGAAAACAAAAA+TGG | - | chr2.2:28361527-28361546 | MS.gene066746:CDS | 20.0% |
| !! | TAAATGTTATTGAACAATCA+AGG | + | chr2.2:28362717-28362736 | None:intergenic | 20.0% |
| !! | TATCTTATTGTTTATACAGA+TGG | - | chr2.2:28363953-28363972 | MS.gene066746:intron | 20.0% |
| !! | TATCTTTATTAGAAAGAACT+AGG | + | chr2.2:28362106-28362125 | None:intergenic | 20.0% |
| !! | TATTAAAAAAATTCAGAACG+AGG | + | chr2.2:28362403-28362422 | None:intergenic | 20.0% |
| !! | TCTAACTCTTAATTTAAAGA+TGG | + | chr2.2:28361787-28361806 | None:intergenic | 20.0% |
| !! | TCTGATAAAATTGTAAAACT+TGG | - | chr2.2:28360483-28360502 | MS.gene066746:intron | 20.0% |
| !! | TGAAAATTTAGGAATAATGA+GGG | + | chr2.2:28358760-28358779 | None:intergenic | 20.0% |
| !! | TGTTATCTTGAATAATTTGA+TGG | - | chr2.2:28359395-28359414 | MS.gene066746:intron | 20.0% |
| !! | TTAAAAAAAGTAGTGAATAC+TGG | + | chr2.2:28363839-28363858 | None:intergenic | 20.0% |
| !! | TTGAAAATTTAGGAATAATG+AGG | + | chr2.2:28358761-28358780 | None:intergenic | 20.0% |
| !!! | ATTAGGGTAAAATTTTCAAT+TGG | - | chr2.2:28358845-28358864 | MS.gene066746:intron | 20.0% |
| !!! | TAAATAGAAGTACAATAGTT+TGG | - | chr2.2:28363613-28363632 | MS.gene066746:intron | 20.0% |
| !!! | TCTTTCAATTTTAGGATTTA+GGG | - | chr2.2:28358797-28358816 | MS.gene066746:intron | 20.0% |
| !!! | TTAAGAGTGTGATTAAATTA+TGG | - | chr2.2:28358953-28358972 | MS.gene066746:intron | 20.0% |
| !!! | TTGAAAATTTGAAATTGCTT+TGG | - | chr2.2:28359331-28359350 | MS.gene066746:CDS | 20.0% |
| !!! | TTTATTGGATGTTGATTTAA+GGG | - | chr2.2:28360574-28360593 | MS.gene066746:intron | 20.0% |
| !!! | TTTTATTGGATGTTGATTTA+AGG | - | chr2.2:28360573-28360592 | MS.gene066746:intron | 20.0% |
| ! | AGAACTAAGATTATCAAATG+AGG | - | chr2.2:28360404-28360423 | MS.gene066746:intron | 25.0% |
| ! | AGCATTTACTAACTATACAA+AGG | + | chr2.2:28359856-28359875 | None:intergenic | 25.0% |
| ! | ATATTAAATCGTAGGATGAT+TGG | + | chr2.2:28363753-28363772 | None:intergenic | 25.0% |
| ! | ATCAAAATAGAATTCCTAGA+GGG | - | chr2.2:28360101-28360120 | MS.gene066746:intron | 25.0% |
| ! | ATTATCAAATGAGGAACATA+GGG | - | chr2.2:28360413-28360432 | MS.gene066746:intron | 25.0% |
| ! | CAAATCTTAAACTGATTAAG+TGG | + | chr2.2:28361241-28361260 | None:intergenic | 25.0% |
| ! | CAACACTATTTCATTTACTT+TGG | - | chr2.2:28360971-28360990 | MS.gene066746:intron | 25.0% |
| ! | CAAGAAAATATTGAAGGTAA+AGG | - | chr2.2:28363194-28363213 | MS.gene066746:intron | 25.0% |
| ! | GAATGTCTAAAGAAATATGT+TGG | - | chr2.2:28361748-28361767 | MS.gene066746:intron | 25.0% |
| ! | TAATCATAACAACTAGTTGA+CGG | + | chr2.2:28359374-28359393 | None:intergenic | 25.0% |
| ! | TATTTCAAGGATTTATAGTC+TGG | - | chr2.2:28359919-28359938 | MS.gene066746:intron | 25.0% |
| ! | TCTTATTGTTTATACAGATG+GGG | - | chr2.2:28363955-28363974 | MS.gene066746:intron | 25.0% |
| ! | TGTAAATGAATCATTGGAAT+GGG | - | chr2.2:28361343-28361362 | MS.gene066746:CDS | 25.0% |
| ! | TTAAATAACAACCACAATTC+AGG | + | chr2.2:28362658-28362677 | None:intergenic | 25.0% |
| ! | TTACAAGACTGTATCTAATT+AGG | + | chr2.2:28362786-28362805 | None:intergenic | 25.0% |
| ! | TTGATTTAACATGTGAGAAA+TGG | + | chr2.2:28363988-28364007 | None:intergenic | 25.0% |
| ! | TTGTCTATTTAAACAACCTT+TGG | - | chr2.2:28363803-28363822 | MS.gene066746:intron | 25.0% |
| ! | TTTCTCACATGTTAAATCAA+TGG | - | chr2.2:28363988-28364007 | MS.gene066746:intron | 25.0% |
| !! | AAACAACATGTATTTTCTTC+AGG | - | chr2.2:28360350-28360369 | MS.gene066746:intron | 25.0% |
| !! | CTTTACCTTCAATATTTTCT+TGG | + | chr2.2:28363196-28363215 | None:intergenic | 25.0% |
| !! | GAGATTGTTTAATCTTTTCA+TGG | - | chr2.2:28363086-28363105 | MS.gene066746:intron | 25.0% |
| !! | GTTGTTAATCAGCATTTTAT+TGG | - | chr2.2:28360559-28360578 | MS.gene066746:intron | 25.0% |
| !! | TACAATAGTTTGGAATAACA+AGG | - | chr2.2:28363623-28363642 | MS.gene066746:intron | 25.0% |
| !! | TTCAGTTTCATAGTTTTCAT+TGG | - | chr2.2:28359030-28359049 | MS.gene066746:intron | 25.0% |
| !! | TTTGATTGTTATTGAACACA+GGG | - | chr2.2:28358989-28359008 | MS.gene066746:intron | 25.0% |
| !!! | AATGTTTTGAAGGAAACTAT+TGG | - | chr2.2:28362284-28362303 | MS.gene066746:CDS | 25.0% |
| !!! | AATTTTAGGATTTAGGGTTA+GGG | - | chr2.2:28358803-28358822 | MS.gene066746:intron | 25.0% |
| !!! | AATTTTTTAAGCAGCTATGA+AGG | + | chr2.2:28360924-28360943 | None:intergenic | 25.0% |
| !!! | AGATGCTAAAAATGTTTTGA+AGG | - | chr2.2:28362274-28362293 | MS.gene066746:CDS | 25.0% |
| !!! | ATGTTTTGAAGGAAACTATT+GGG | - | chr2.2:28362285-28362304 | MS.gene066746:CDS | 25.0% |
| !!! | ATTTTTTAAGCAGCTATGAA+GGG | + | chr2.2:28360923-28360942 | None:intergenic | 25.0% |
| !!! | CTCTTTCAATTTTAGGATTT+AGG | - | chr2.2:28358796-28358815 | MS.gene066746:intron | 25.0% |
| !!! | CTTTTAGTTTCAATTTTGCA+AGG | + | chr2.2:28361480-28361499 | None:intergenic | 25.0% |
| !!! | GTAGTTTTATGCTATGTTTA+AGG | - | chr2.2:28358879-28358898 | MS.gene066746:intron | 25.0% |
| !!! | TGATGGCAATAAATCTTTTT+TGG | + | chr2.2:28362960-28362979 | None:intergenic | 25.0% |
| !!! | TTTTGATTGTTATTGAACAC+AGG | - | chr2.2:28358988-28359007 | MS.gene066746:intron | 25.0% |
| AAATCAACAAATTCACAGCA+TGG | + | chr2.2:28359761-28359780 | None:intergenic | 30.0% | |
| AAGAAAATGTACCCAAGTAA+TGG | + | chr2.2:28360275-28360294 | None:intergenic | 30.0% | |
| AATAAAGCAATACCCTTCTT+CGG | - | chr2.2:28361035-28361054 | MS.gene066746:intron | 30.0% | |
| AATCAACAAATTCACAGCAT+GGG | + | chr2.2:28359760-28359779 | None:intergenic | 30.0% | |
| AATCCTAGGATTCATATGAA+TGG | - | chr2.2:28361872-28361891 | MS.gene066746:CDS | 30.0% | |
| AGTACCTAATAGAGTTACTT+CGG | - | chr2.2:28361077-28361096 | MS.gene066746:intron | 30.0% | |
| CACTTTCAAATATCCTCAAA+TGG | - | chr2.2:28359637-28359656 | MS.gene066746:intron | 30.0% | |
| CATCAAAATAGAATTCCTAG+AGG | - | chr2.2:28360100-28360119 | MS.gene066746:intron | 30.0% | |
| CTACGATTTAATATACCACT+CGG | - | chr2.2:28363759-28363778 | MS.gene066746:intron | 30.0% | |
| CTTATTGTTTATACAGATGG+GGG | - | chr2.2:28363956-28363975 | MS.gene066746:intron | 30.0% | |
| CTTTCTTTACCTTAGCAATA+AGG | - | chr2.2:28359430-28359449 | MS.gene066746:intron | 30.0% | |
| GAAAGCCAAGAAAATATTGA+AGG | - | chr2.2:28363188-28363207 | MS.gene066746:intron | 30.0% | |
| GATAAGAAATACTGCAGTTA+AGG | + | chr2.2:28359803-28359822 | None:intergenic | 30.0% | |
| GATCCAAATCCTTTCATAAT+TGG | + | chr2.2:28361828-28361847 | None:intergenic | 30.0% | |
| GATTATCAAATGAGGAACAT+AGG | - | chr2.2:28360412-28360431 | MS.gene066746:intron | 30.0% | |
| GGGTGTAGTGTAATAAATTA+TGG | + | chr2.2:28363725-28363744 | None:intergenic | 30.0% | |
| GGTAACTTTCAGCATAAATT+CGG | - | chr2.2:28362217-28362236 | MS.gene066746:intron | 30.0% | |
| GTATAATAACAAAGTCAGTC+CGG | + | chr2.2:28360016-28360035 | None:intergenic | 30.0% | |
| GTGTAAATGAATCATTGGAA+TGG | - | chr2.2:28361342-28361361 | MS.gene066746:CDS | 30.0% | |
| GTTAAAGAGGTAACTGAAAA+CGG | - | chr2.2:28363040-28363059 | MS.gene066746:intron | 30.0% | |
| TACGATTTAATATACCACTC+GGG | - | chr2.2:28363760-28363779 | MS.gene066746:intron | 30.0% | |
| TAGTGAATACTGGATACTTT+AGG | + | chr2.2:28363829-28363848 | None:intergenic | 30.0% | |
| TATAGATGGCAGAATTTCAA+GGG | + | chr2.2:28362063-28362082 | None:intergenic | 30.0% | |
| TATAGTTCAAAATACGCGTT+AGG | + | chr2.2:28359202-28359221 | None:intergenic | 30.0% | |
| TCAAAATAGAATTCCTAGAG+GGG | - | chr2.2:28360102-28360121 | MS.gene066746:intron | 30.0% | |
| TCATAGAAGTTATTGTCATC+AGG | + | chr2.2:28361177-28361196 | None:intergenic | 30.0% | |
| TCATTCATGAATGCATAATG+TGG | - | chr2.2:28362533-28362552 | MS.gene066746:CDS | 30.0% | |
| TGTAAGTAAACATAGAAGTC+CGG | - | chr2.2:28360847-28360866 | MS.gene066746:intron | 30.0% | |
| TTAGCCAATATTGTGTCAAA+CGG | + | chr2.2:28359680-28359699 | None:intergenic | 30.0% | |
| TTATTGGATGTAATGATTGC+AGG | - | chr2.2:28360052-28360071 | MS.gene066746:intron | 30.0% | |
| TTCTCAATTTCATGTACATC+AGG | + | chr2.2:28363171-28363190 | None:intergenic | 30.0% | |
| TTTATACACAGAATCAAGTG+TGG | + | chr2.2:28363918-28363937 | None:intergenic | 30.0% | |
| TTTCCATTCATATGAATCCT+AGG | + | chr2.2:28361878-28361897 | None:intergenic | 30.0% | |
| ! | AATACTGCAAAAGTGCAAAT+AGG | + | chr2.2:28363411-28363430 | None:intergenic | 30.0% |
| ! | AATGGGTCTCTTTCAATTTT+AGG | - | chr2.2:28358789-28358808 | MS.gene066746:intron | 30.0% |
| ! | AGTTTCAATTTTGCAAGGTT+TGG | + | chr2.2:28361475-28361494 | None:intergenic | 30.0% |
| ! | ATTGTCTATCCATTTGTTGA+CGG | - | chr2.2:28359583-28359602 | MS.gene066746:intron | 30.0% |
| ! | TCTGGTTGATGTATATTTCA+AGG | - | chr2.2:28359906-28359925 | MS.gene066746:intron | 30.0% |
| ! | TTGATTGTTATTGAACACAG+GGG | - | chr2.2:28358990-28359009 | MS.gene066746:intron | 30.0% |
| ! | TTGTTGTTGTTGTTATAGTC+CGG | - | chr2.2:28359994-28360013 | MS.gene066746:intron | 30.0% |
| !! | ATGAATGGAAAAAGTACTAC+TGG | - | chr2.2:28361887-28361906 | MS.gene066746:CDS | 30.0% |
| !! | GATTTTCACTGATTATTGCT+TGG | - | chr2.2:28363650-28363669 | MS.gene066746:intron | 30.0% |
| !! | TGAAATAGTGTTGCTTATGT+AGG | + | chr2.2:28360964-28360983 | None:intergenic | 30.0% |
| !! | TGAATGGAAAAAGTACTACT+GGG | - | chr2.2:28361888-28361907 | MS.gene066746:CDS | 30.0% |
| !!! | AATTTTTTGGGTAACTTGTC+AGG | - | chr2.2:28363119-28363138 | MS.gene066746:intron | 30.0% |
| !!! | ACTTTGGTTCTTTTATATGC+AGG | - | chr2.2:28360987-28361006 | MS.gene066746:intron | 30.0% |
| !!! | ATTCTATTTTGATGTGTTGG+TGG | + | chr2.2:28360094-28360113 | None:intergenic | 30.0% |
| !!! | CAATTTTAGGATTTAGGGTT+AGG | - | chr2.2:28358802-28358821 | MS.gene066746:intron | 30.0% |
| !!! | CTTTGGTTCTTTTATATGCA+GGG | - | chr2.2:28360988-28361007 | MS.gene066746:intron | 30.0% |
| !!! | GGAATTCTATTTTGATGTGT+TGG | + | chr2.2:28360097-28360116 | None:intergenic | 30.0% |
| !!! | GTTCTGTTTTGTTTAGCAAA+TGG | - | chr2.2:28359144-28359163 | MS.gene066746:intron | 30.0% |
| !!! | TTTTTTAAGCAGCTATGAAG+GGG | + | chr2.2:28360922-28360941 | None:intergenic | 30.0% |
| AACAAAAAGGTAGCCATTTG+AGG | + | chr2.2:28359653-28359672 | None:intergenic | 35.0% | |
| AACCGAATAAACCAGTTTAG+CGG | + | chr2.2:28359259-28359278 | None:intergenic | 35.0% | |
| AAGTTTCTATCACGTATCTC+AGG | - | chr2.2:28362127-28362146 | MS.gene066746:intron | 35.0% | |
| ACCAAATTGAGATGTCAAGT+TGG | - | chr2.2:28362477-28362496 | MS.gene066746:CDS | 35.0% | |
| ACCATAAGATTGTGATGGTA+CGG | + | chr2.2:28360717-28360736 | None:intergenic | 35.0% | |
| ATAAAGCAATACCCTTCTTC+GGG | - | chr2.2:28361036-28361055 | MS.gene066746:intron | 35.0% | |
| ATAATTGGACCAACACACAT+TGG | + | chr2.2:28361813-28361832 | None:intergenic | 35.0% | |
| ATCAAGGTACACAAGAATAG+CGG | + | chr2.2:28362701-28362720 | None:intergenic | 35.0% | |
| ATGATGTCATACGAAGGATA+AGG | - | chr2.2:28360460-28360479 | MS.gene066746:intron | 35.0% | |
| ATTTGGATCTCATAAGCATG+TGG | - | chr2.2:28361839-28361858 | MS.gene066746:intron | 35.0% | |
| CAAATGAGTTGCAAGTGATA+CGG | - | chr2.2:28363540-28363559 | MS.gene066746:intron | 35.0% | |
| CAGTAAAATAAATGGCAGAC+TGG | + | chr2.2:28363233-28363252 | None:intergenic | 35.0% | |
| CATAATCAAGTTCATGGAAC+TGG | + | chr2.2:28359236-28359255 | None:intergenic | 35.0% | |
| CGAGTGGTATATTAAATCGT+AGG | + | chr2.2:28363761-28363780 | None:intergenic | 35.0% | |
| CTGCTGCATTTAGTAAAATC+TGG | - | chr2.2:28359888-28359907 | MS.gene066746:intron | 35.0% | |
| CTTTCAGTAATCCTGAATTG+TGG | - | chr2.2:28362644-28362663 | MS.gene066746:intron | 35.0% | |
| GAGAAGAAGAACAATGTAAC+CGG | + | chr2.2:28360869-28360888 | None:intergenic | 35.0% | |
| GATTTATTGCCATCACAGAA+TGG | - | chr2.2:28362965-28362984 | MS.gene066746:intron | 35.0% | |
| GGACTTCTATGTTTACTTAC+AGG | + | chr2.2:28360848-28360867 | None:intergenic | 35.0% | |
| GGTAAAGAAAGAAAACCAAG+AGG | + | chr2.2:28359421-28359440 | None:intergenic | 35.0% | |
| GGTCCAATTATGAAAGGATT+TGG | - | chr2.2:28361822-28361841 | MS.gene066746:intron | 35.0% | |
| GTACCTAATAGAGTTACTTC+GGG | - | chr2.2:28361078-28361097 | MS.gene066746:intron | 35.0% | |
| GTATAGATGGCAGAATTTCA+AGG | + | chr2.2:28362064-28362083 | None:intergenic | 35.0% | |
| GTCAAACGGGAAAAACAAAA+AGG | + | chr2.2:28359666-28359685 | None:intergenic | 35.0% | |
| GTTAGATTTCCAATGTGTGT+TGG | - | chr2.2:28361801-28361820 | MS.gene066746:intron | 35.0% | |
| TACATCTACTGGATTGTAGT+CGG | + | chr2.2:28361211-28361230 | None:intergenic | 35.0% | |
| TACCATCACAATCTTATGGT+GGG | - | chr2.2:28360717-28360736 | MS.gene066746:intron | 35.0% | |
| TAGCCAATATTGTGTCAAAC+GGG | + | chr2.2:28359679-28359698 | None:intergenic | 35.0% | |
| TATGTCAGTGTTACACTGAA+TGG | + | chr2.2:28359716-28359735 | None:intergenic | 35.0% | |
| TGAATCCTAGGATTTAACTG+AGG | + | chr2.2:28361866-28361885 | None:intergenic | 35.0% | |
| TGACATCATCTGCATTAACA+CGG | + | chr2.2:28360449-28360468 | None:intergenic | 35.0% | |
| TGCCATCTATACTCTATTGA+GGG | - | chr2.2:28362072-28362091 | MS.gene066746:CDS | 35.0% | |
| TTCCCTCAATAGAGTATAGA+TGG | + | chr2.2:28362077-28362096 | None:intergenic | 35.0% | |
| TTGAGAGAGTTAAGACCTTT+GGG | - | chr2.2:28362019-28362038 | MS.gene066746:CDS | 35.0% | |
| TTTCCCGTTTGACACAATAT+TGG | - | chr2.2:28359673-28359692 | MS.gene066746:CDS | 35.0% | |
| TTTGAGAGAGTTAAGACCTT+TGG | - | chr2.2:28362018-28362037 | MS.gene066746:CDS | 35.0% | |
| ! | ATTCGGTTGGTATACTAGTT+GGG | - | chr2.2:28359271-28359290 | MS.gene066746:intron | 35.0% |
| ! | CAGATTTTACTAAATGCAGC+AGG | + | chr2.2:28359890-28359909 | None:intergenic | 35.0% |
| ! | CATGTATTTTCTTCAGGAGA+AGG | - | chr2.2:28360356-28360375 | MS.gene066746:intron | 35.0% |
| ! | GGGAAGTGTAAATGAATCAT+TGG | - | chr2.2:28361337-28361356 | MS.gene066746:CDS | 35.0% |
| ! | TATTCGGTTGGTATACTAGT+TGG | - | chr2.2:28359270-28359289 | MS.gene066746:intron | 35.0% |
| ! | TGAATAATTTGATGGCCTCT+TGG | - | chr2.2:28359403-28359422 | MS.gene066746:intron | 35.0% |
| ! | TGATTGTTATTGAACACAGG+GGG | - | chr2.2:28358991-28359010 | MS.gene066746:intron | 35.0% |
| ! | TGTGTTGGTCCAATTATGAA+AGG | - | chr2.2:28361816-28361835 | MS.gene066746:intron | 35.0% |
| ! | TTGTCTATCCATTTGTTGAC+GGG | - | chr2.2:28359584-28359603 | MS.gene066746:intron | 35.0% |
| !! | GAAGGGTATTGCTTTATTGA+AGG | + | chr2.2:28361033-28361052 | None:intergenic | 35.0% |
| AAAATATGGAATCACCCGAG+TGG | + | chr2.2:28363777-28363796 | None:intergenic | 40.0% | |
| AAAGTCGCACCTTATTGCTA+AGG | + | chr2.2:28359442-28359461 | None:intergenic | 40.0% | |
| AACAACTAGTTGACGGTCTT+TGG | + | chr2.2:28359367-28359386 | None:intergenic | 40.0% | |
| AAGCTTACCACTACTATCGT+AGG | + | chr2.2:28358710-28358729 | None:intergenic | 40.0% | |
| AATAGAGTTACTTCGGGTAC+TGG | - | chr2.2:28361084-28361103 | MS.gene066746:intron | 40.0% | |
| AATCGTAGGATGATTGGAAG+TGG | + | chr2.2:28363747-28363766 | None:intergenic | 40.0% | |
| AATTATGGCCACTGTTTCCA+CGG | + | chr2.2:28363710-28363729 | None:intergenic | 40.0% | |
| ACTTGATTATGCCGCTAAAC+TGG | - | chr2.2:28359245-28359264 | MS.gene066746:intron | 40.0% | |
| AGATCTGTCTCTTACCTACT+GGG | - | chr2.2:28362150-28362169 | MS.gene066746:intron | 40.0% | |
| AGCTTACCACTACTATCGTA+GGG | + | chr2.2:28358709-28358728 | None:intergenic | 40.0% | |
| AGTTAAGACCTTTGGGCATT+AGG | - | chr2.2:28362026-28362045 | MS.gene066746:CDS | 40.0% | |
| ATCGTAGGATGATTGGAAGT+GGG | + | chr2.2:28363746-28363765 | None:intergenic | 40.0% | |
| ATGCAGATGATGTCATACGA+AGG | - | chr2.2:28360454-28360473 | MS.gene066746:intron | 40.0% | |
| ATTGTTTATACAGATGGGGG+CGG | - | chr2.2:28363959-28363978 | MS.gene066746:intron | 40.0% | |
| CACAATCTGGTCTATGACAT+GGG | - | chr2.2:28361317-28361336 | MS.gene066746:intron | 40.0% | |
| CACAGACACACTAGTTAAAG+AGG | - | chr2.2:28363027-28363046 | MS.gene066746:intron | 40.0% | |
| CAGTGTTACACTGAATGGTA+GGG | + | chr2.2:28359711-28359730 | None:intergenic | 40.0% | |
| CCTACCCATTGAATATCTTC+CGG | + | chr2.2:28362821-28362840 | None:intergenic | 40.0% | |
| CGGAAGATATTCAATGGGTA+GGG | - | chr2.2:28362819-28362838 | MS.gene066746:intron | 40.0% | |
| CTCTCCGGAAGATATTCAAT+GGG | - | chr2.2:28362814-28362833 | MS.gene066746:intron | 40.0% | |
| CTCTTATCGATGCAATTGCA+AGG | - | chr2.2:28363335-28363354 | MS.gene066746:intron | 40.0% | |
| CTGCCATCTATACTCTATTG+AGG | - | chr2.2:28362071-28362090 | MS.gene066746:CDS | 40.0% | |
| GACTGTATCTAATTAGGTGC+TGG | + | chr2.2:28362780-28362799 | None:intergenic | 40.0% | |
| GATGTACGGTGAAATTGACA+TGG | - | chr2.2:28360177-28360196 | MS.gene066746:intron | 40.0% | |
| GCCAACTTGACATCTCAATT+TGG | + | chr2.2:28362481-28362500 | None:intergenic | 40.0% | |
| GCGGCTAGCAGTAAAATAAA+TGG | + | chr2.2:28363241-28363260 | None:intergenic | 40.0% | |
| GCTAACATCACTAACTACAG+AGG | + | chr2.2:28361958-28361977 | None:intergenic | 40.0% | |
| GCTTATGTAGGCTTGAATAG+TGG | + | chr2.2:28360952-28360971 | None:intergenic | 40.0% | |
| GGAAGATATTCAATGGGTAG+GGG | - | chr2.2:28362820-28362839 | MS.gene066746:intron | 40.0% | |
| GGTGATATCGGACTCTATAT+TGG | - | chr2.2:28359519-28359538 | MS.gene066746:CDS | 40.0% | |
| GTACCATCACAATCTTATGG+TGG | - | chr2.2:28360716-28360735 | MS.gene066746:intron | 40.0% | |
| GTACCCGAAGTAACTCTATT+AGG | + | chr2.2:28361084-28361103 | None:intergenic | 40.0% | |
| GTGGATGTAAGTACATCTAC+TGG | + | chr2.2:28361222-28361241 | None:intergenic | 40.0% | |
| TAAGATTGTGATGGTACGGA+CGG | + | chr2.2:28360713-28360732 | None:intergenic | 40.0% | |
| TACTGGATACTTTAGGCCAA+AGG | + | chr2.2:28363822-28363841 | None:intergenic | 40.0% | |
| TAGCGGCATAATCAAGTTCA+TGG | + | chr2.2:28359242-28359261 | None:intergenic | 40.0% | |
| TAGTTTATCTGCAGTGAGCT+TGG | - | chr2.2:28360890-28360909 | MS.gene066746:intron | 40.0% | |
| TCAAATTCACCAACTTGAGC+AGG | - | chr2.2:28360204-28360223 | MS.gene066746:intron | 40.0% | |
| TCAAGCTGATGCCATTACTT+GGG | - | chr2.2:28360261-28360280 | MS.gene066746:intron | 40.0% | |
| TCAATTTCACCGTACATCCT+GGG | + | chr2.2:28360175-28360194 | None:intergenic | 40.0% | |
| TCAGTGTTACACTGAATGGT+AGG | + | chr2.2:28359712-28359731 | None:intergenic | 40.0% | |
| TCCGTACCATCACAATCTTA+TGG | - | chr2.2:28360713-28360732 | MS.gene066746:intron | 40.0% | |
| TCTCTCCGGAAGATATTCAA+TGG | - | chr2.2:28362813-28362832 | MS.gene066746:intron | 40.0% | |
| TCTTCTTCTGTTGGAAAACG+TGG | - | chr2.2:28360788-28360807 | MS.gene066746:intron | 40.0% | |
| TGCTTCTCGTAAGAAGCAAA+AGG | - | chr2.2:28360682-28360701 | MS.gene066746:intron | 40.0% | |
| TGGTATACTAGTTGGGAACT+GGG | - | chr2.2:28359278-28359297 | MS.gene066746:intron | 40.0% | |
| TTATTGAACACAGGGGGATA+TGG | - | chr2.2:28358997-28359016 | MS.gene066746:intron | 40.0% | |
| TTGGTATACTAGTTGGGAAC+TGG | - | chr2.2:28359277-28359296 | MS.gene066746:intron | 40.0% | |
| TTGTTGCATTGAGTAGATCG+TGG | - | chr2.2:28359830-28359849 | MS.gene066746:CDS | 40.0% | |
| TTTGAAGAGAGTCGCAAAGT+GGG | + | chr2.2:28361439-28361458 | None:intergenic | 40.0% | |
| ! | CGTTTTCCAACAGAAGAAGA+TGG | + | chr2.2:28360788-28360807 | None:intergenic | 40.0% |
| ! | CTGGAATCAACCATCGTTTT+GGG | - | chr2.2:28362849-28362868 | MS.gene066746:intron | 40.0% |
| ! | GATCTTTCTGATGGCGATAA+TGG | - | chr2.2:28363364-28363383 | MS.gene066746:intron | 40.0% |
| ! | GCAAGAAAGTACGAACAAGA+TGG | - | chr2.2:28361151-28361170 | MS.gene066746:intron | 40.0% |
| ! | GCGACTTTTGTGAACTAGAA+AGG | - | chr2.2:28359454-28359473 | MS.gene066746:intron | 40.0% |
| ! | GCTAAACTGGTTTATTCGGT+TGG | - | chr2.2:28359258-28359277 | MS.gene066746:intron | 40.0% |
| ! | GTCTTTGAGTAGAGTTCTGA+AGG | - | chr2.2:28361674-28361693 | MS.gene066746:CDS | 40.0% |
| ! | TAGTTAGTGATGTTAGCCTG+TGG | - | chr2.2:28361961-28361980 | MS.gene066746:CDS | 40.0% |
| ! | TGCCGCTAAACTGGTTTATT+CGG | - | chr2.2:28359254-28359273 | MS.gene066746:intron | 40.0% |
| ! | TGGAATCAACCATCGTTTTG+GGG | - | chr2.2:28362850-28362869 | MS.gene066746:intron | 40.0% |
| ! | TGTCTATCCATTTGTTGACG+GGG | - | chr2.2:28359585-28359604 | MS.gene066746:intron | 40.0% |
| !! | TGGATGTTGATTTAAGGGAG+TGG | - | chr2.2:28360579-28360598 | MS.gene066746:intron | 40.0% |
| !! | TTTTGAAGAGAGTCGCAAAG+TGG | + | chr2.2:28361440-28361459 | None:intergenic | 40.0% |
| !!! | ATCCCAGCCCACATTTTTTT+GGG | + | chr2.2:28362191-28362210 | None:intergenic | 40.0% |
| !!! | TTTTTGGGTAACTTGTCAGG+TGG | - | chr2.2:28363122-28363141 | MS.gene066746:intron | 40.0% |
| AACACAGGGGGATATGGTAT+TGG | - | chr2.2:28359003-28359022 | MS.gene066746:intron | 45.0% | |
| AACAGAAGAAGATGGCTGGT+GGG | + | chr2.2:28360780-28360799 | None:intergenic | 45.0% | |
| ACTGGGATGTGCTCAAACTT+TGG | - | chr2.2:28361905-28361924 | MS.gene066746:CDS | 45.0% | |
| AGATATTCAATGGGTAGGGG+AGG | - | chr2.2:28362823-28362842 | MS.gene066746:intron | 45.0% | |
| AGGCTTGCAGATCTTTCTGA+TGG | - | chr2.2:28363355-28363374 | MS.gene066746:intron | 45.0% | |
| ATATCTTCCGGAGAGATCTG+CGG | + | chr2.2:28362809-28362828 | None:intergenic | 45.0% | |
| ATGTCATACCCCAGGATGTA+CGG | - | chr2.2:28360163-28360182 | MS.gene066746:intron | 45.0% | |
| CAATTTCACCGTACATCCTG+GGG | + | chr2.2:28360174-28360193 | None:intergenic | 45.0% | |
| CCGGAAGATATTCAATGGGT+AGG | - | chr2.2:28362818-28362837 | MS.gene066746:intron | 45.0% | |
| CTAAATCCCCCGTCAACAAA+TGG | + | chr2.2:28359595-28359614 | None:intergenic | 45.0% | |
| CTACTGGGTAAAATGCTCCA+GGG | - | chr2.2:28362165-28362184 | MS.gene066746:intron | 45.0% | |
| CTCAAGCTGATGCCATTACT+TGG | - | chr2.2:28360260-28360279 | MS.gene066746:intron | 45.0% | |
| CTGACCACTTCTGGTGATAT+CGG | - | chr2.2:28359507-28359526 | MS.gene066746:CDS | 45.0% | |
| GAGATCCATTGTTCCATCAC+TGG | + | chr2.2:28363896-28363915 | None:intergenic | 45.0% | |
| GAGATCTGTCTCTTACCTAC+TGG | - | chr2.2:28362149-28362168 | MS.gene066746:intron | 45.0% | |
| GAGGAACATAGGGAACTTCT+AGG | - | chr2.2:28360423-28360442 | MS.gene066746:intron | 45.0% | |
| GCACAATCTGGTCTATGACA+TGG | - | chr2.2:28361316-28361335 | MS.gene066746:intron | 45.0% | |
| GTCAATTTCACCGTACATCC+TGG | + | chr2.2:28360176-28360195 | None:intergenic | 45.0% | |
| GTGCATACAAGGACATAGAC+TGG | - | chr2.2:28361983-28362002 | MS.gene066746:CDS | 45.0% | |
| GTGGTCCTCAGTTAAATCCT+AGG | - | chr2.2:28361858-28361877 | MS.gene066746:intron | 45.0% | |
| TACGAACCCTACGATAGTAG+TGG | - | chr2.2:28358700-28358719 | MS.gene066746:CDS | 45.0% | |
| TATGTCCTTGTATGCACCAC+AGG | + | chr2.2:28361980-28361999 | None:intergenic | 45.0% | |
| TCCAGGGCCCAAAAAAATGT+GGG | - | chr2.2:28362181-28362200 | MS.gene066746:intron | 45.0% | |
| TCGTAGGATGATTGGAAGTG+GGG | + | chr2.2:28363745-28363764 | None:intergenic | 45.0% | |
| TGGGGATGAAATGAAGGAGA+AGG | + | chr2.2:28360743-28360762 | None:intergenic | 45.0% | |
| TTACGAGAAGCAGAGACTGT+TGG | + | chr2.2:28360674-28360693 | None:intergenic | 45.0% | |
| TTCAGTGAAATGGCCAGTGA+TGG | - | chr2.2:28363880-28363899 | MS.gene066746:intron | 45.0% | |
| TTCATCTTACTTCCATGCCG+TGG | - | chr2.2:28363690-28363709 | MS.gene066746:intron | 45.0% | |
| TTCCAACAGAAGAAGATGGC+TGG | + | chr2.2:28360784-28360803 | None:intergenic | 45.0% | |
| TTGAAGAGAGTCGCAAAGTG+GGG | + | chr2.2:28361438-28361457 | None:intergenic | 45.0% | |
| TTGTGCAGACGCTGAAAAGT+AGG | + | chr2.2:28361302-28361321 | None:intergenic | 45.0% | |
| ! | AATGGCCAGTGATGGAACAA+TGG | - | chr2.2:28363888-28363907 | MS.gene066746:intron | 45.0% |
| ! | CCAAAACGATGGTTGATTCC+AGG | + | chr2.2:28362851-28362870 | None:intergenic | 45.0% |
| ! | CCTGGAATCAACCATCGTTT+TGG | - | chr2.2:28362848-28362867 | MS.gene066746:intron | 45.0% |
| ! | GGAATCAACCATCGTTTTGG+GGG | - | chr2.2:28362851-28362870 | MS.gene066746:intron | 45.0% |
| ! | GGACTGACTTTGATCCATGT+AGG | - | chr2.2:28359940-28359959 | MS.gene066746:intron | 45.0% |
| ! | GGCATCAGCTTGAGCTTTAA+AGG | + | chr2.2:28360254-28360273 | None:intergenic | 45.0% |
| ! | GGTAACTTGTCAGGTGGAAA+GGG | - | chr2.2:28363128-28363147 | MS.gene066746:intron | 45.0% |
| ! | GTCTATCCATTTGTTGACGG+GGG | - | chr2.2:28359586-28359605 | MS.gene066746:intron | 45.0% |
| ! | TTTTCAGCGTCTGCACAATC+TGG | - | chr2.2:28361304-28361323 | MS.gene066746:intron | 45.0% |
| !! | GGAATGGGTTAATCTGTCAG+AGG | - | chr2.2:28361358-28361377 | MS.gene066746:CDS | 45.0% |
| !!! | CATCCCAGCCCACATTTTTT+TGG | + | chr2.2:28362192-28362211 | None:intergenic | 45.0% |
| !! | TTATATACATATAAATTTAT+TGG | - | chr2.2:28360036-28360055 | MS.gene066746:intron | 5.0% |
| !!! | ATTTAATAATTCTAAAATAT+TGG | - | chr2.2:28361554-28361573 | MS.gene066746:CDS | 5.0% |
| !!! | ATTTTATAAATTGTTAAATT+AGG | - | chr2.2:28362349-28362368 | MS.gene066746:intron | 5.0% |
| AATACCCTTCTTCGGGACCA+GGG | - | chr2.2:28361043-28361062 | MS.gene066746:intron | 50.0% | |
| ACAGAAGAAGATGGCTGGTG+GGG | + | chr2.2:28360779-28360798 | None:intergenic | 50.0% | |
| ACAGGCTGGGGATGAAATGA+AGG | + | chr2.2:28360749-28360768 | None:intergenic | 50.0% | |
| ACTAAGTGGAGCAGCCTACA+TGG | + | chr2.2:28359957-28359976 | None:intergenic | 50.0% | |
| AGACCTTTGGGCATTAGGAG+AGG | - | chr2.2:28362031-28362050 | MS.gene066746:CDS | 50.0% | |
| ATGCAGGGCCAAGTATTACC+AGG | - | chr2.2:28361003-28361022 | MS.gene066746:intron | 50.0% | |
| ATGTAGGCTGCTCCACTTAG+TGG | - | chr2.2:28359956-28359975 | MS.gene066746:intron | 50.0% | |
| ATGTCCAGAACTCAGCACAC+TGG | + | chr2.2:28360627-28360646 | None:intergenic | 50.0% | |
| CAACAGAAGAAGATGGCTGG+TGG | + | chr2.2:28360781-28360800 | None:intergenic | 50.0% | |
| CACCAGCCATCTTCTTCTGT+TGG | - | chr2.2:28360779-28360798 | MS.gene066746:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr2.2:28359968-28359987 | MS.gene066746:intron | 50.0% | |
| CCTACTGGGTAAAATGCTCC+AGG | - | chr2.2:28362164-28362183 | MS.gene066746:intron | 50.0% | |
| CGTACTTTCTTGCCAACGAG+CGG | + | chr2.2:28361144-28361163 | None:intergenic | 50.0% | |
| CTCCAGGGCCCAAAAAAATG+TGG | - | chr2.2:28362180-28362199 | MS.gene066746:intron | 50.0% | |
| CTGCTCCACTTAGTGGGATA+AGG | - | chr2.2:28359963-28359982 | MS.gene066746:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | - | chr2.2:28359971-28359990 | MS.gene066746:intron | 50.0% | |
| CTTGTAACCGCAGATCTCTC+CGG | - | chr2.2:28362799-28362818 | MS.gene066746:intron | 50.0% | |
| GAAGCAGAGACTGTTGGACT+TGG | + | chr2.2:28360668-28360687 | None:intergenic | 50.0% | |
| GAGTCCGATATCACCAGAAG+TGG | + | chr2.2:28359514-28359533 | None:intergenic | 50.0% | |
| GCATCAATTGATCCGCTCGT+TGG | - | chr2.2:28361129-28361148 | MS.gene066746:intron | 50.0% | |
| GGACCTGTTCCAGGAACTAA+GGG | - | chr2.2:28360809-28360828 | MS.gene066746:intron | 50.0% | |
| GGCCCAAAAAAATGTGGGCT+GGG | - | chr2.2:28362186-28362205 | MS.gene066746:intron | 50.0% | |
| GGCCCACCATAAGATTGTGA+TGG | + | chr2.2:28360722-28360741 | None:intergenic | 50.0% | |
| TAGGTTCGATGTCATACCCC+AGG | - | chr2.2:28360155-28360174 | MS.gene066746:intron | 50.0% | |
| TATACGCGTCCTGCTCAAGT+TGG | + | chr2.2:28360216-28360235 | None:intergenic | 50.0% | |
| TGCTTCTTGCCCTTAGTTCC+TGG | + | chr2.2:28360821-28360840 | None:intergenic | 50.0% | |
| TGGACCTGTTCCAGGAACTA+AGG | - | chr2.2:28360808-28360827 | MS.gene066746:intron | 50.0% | |
| TGTAGGCTGCTCCACTTAGT+GGG | - | chr2.2:28359957-28359976 | MS.gene066746:intron | 50.0% | |
| TGTCCAGAACTCAGCACACT+GGG | + | chr2.2:28360626-28360645 | None:intergenic | 50.0% | |
| TTAAGGGAGTGGAGACAGAC+AGG | - | chr2.2:28360590-28360609 | MS.gene066746:intron | 50.0% | |
| TTACATGGAACCAGCAGCTG+CGG | + | chr2.2:28362581-28362600 | None:intergenic | 50.0% | |
| TTGCCCTTAGTTCCTGGAAC+AGG | + | chr2.2:28360815-28360834 | None:intergenic | 50.0% | |
| ! | AAGAGGTAGGGGAGGTACAA+AGG | - | chr2.2:28362928-28362947 | MS.gene066746:intron | 50.0% |
| ! | AAGGCGCTCCTGGTAATACT+TGG | + | chr2.2:28361014-28361033 | None:intergenic | 50.0% |
| ! | AGAGGTAGGGGAGGTACAAA+GGG | - | chr2.2:28362929-28362948 | MS.gene066746:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr2.2:28359971-28359990 | None:intergenic | 50.0% |
| ! | CGTGGGTTGAATAGGTCTGT+AGG | - | chr2.2:28362881-28362900 | MS.gene066746:intron | 50.0% |
| ! | GATCTGGTCGTGGGTTGAAT+AGG | - | chr2.2:28362873-28362892 | MS.gene066746:intron | 50.0% |
| ! | GGGTAACTTGTCAGGTGGAA+AGG | - | chr2.2:28363127-28363146 | MS.gene066746:intron | 50.0% |
| ! | GTAGGTCGTGATAGTGTTCC+AGG | - | chr2.2:28362899-28362918 | MS.gene066746:intron | 50.0% |
| ! | GTTAGCCTGTGGTGCATACA+AGG | - | chr2.2:28361972-28361991 | MS.gene066746:CDS | 50.0% |
| !! | AATGTGGGCTGGGATGTGTT+TGG | - | chr2.2:28362196-28362215 | MS.gene066746:intron | 50.0% |
| !! | CCTGGAGCATTTTACCCAGT+AGG | + | chr2.2:28362167-28362186 | None:intergenic | 50.0% |
| !! | TGCTTTATTGAAGGCGCTCC+TGG | + | chr2.2:28361024-28361043 | None:intergenic | 50.0% |
| !!! | AACCATCGTTTTGGGGGATC+TGG | - | chr2.2:28362857-28362876 | MS.gene066746:intron | 50.0% |
| AACTCAGCACACTGGGCTGA+TGG | + | chr2.2:28360619-28360638 | None:intergenic | 55.0% | |
| AGTGTTCCAGGAGCTGGAAG+AGG | - | chr2.2:28362911-28362930 | MS.gene066746:intron | 55.0% | |
| ATACCCTTCTTCGGGACCAG+GGG | - | chr2.2:28361044-28361063 | MS.gene066746:intron | 55.0% | |
| CAAGCACCTCAAGCAGCAAG+AGG | - | chr2.2:28359482-28359501 | MS.gene066746:intron | 55.0% | |
| CAATACCCTTCTTCGGGACC+AGG | - | chr2.2:28361042-28361061 | MS.gene066746:intron | 55.0% | |
| CTTCCATGCCGTGGAAACAG+TGG | - | chr2.2:28363699-28363718 | MS.gene066746:intron | 55.0% | |
| GACCAGATCCCCCAAAACGA+TGG | + | chr2.2:28362862-28362881 | None:intergenic | 55.0% | |
| GCACCTCTCCTAATGCCCAA+AGG | + | chr2.2:28362037-28362056 | None:intergenic | 55.0% | |
| GGAAAACGTGGACCTGTTCC+AGG | - | chr2.2:28360800-28360819 | MS.gene066746:intron | 55.0% | |
| GGGCCCAAAAAAATGTGGGC+TGG | - | chr2.2:28362185-28362204 | MS.gene066746:intron | 55.0% | |
| TCCAGGAGCTGGAAGAGGTA+GGG | - | chr2.2:28362916-28362935 | MS.gene066746:intron | 55.0% | |
| TTCCAGGAGCTGGAAGAGGT+AGG | - | chr2.2:28362915-28362934 | MS.gene066746:intron | 55.0% | |
| ! | CGTGATAGTGTTCCAGGAGC+TGG | - | chr2.2:28362905-28362924 | MS.gene066746:intron | 55.0% |
| ! | CTCTTGCTGCTTGAGGTGCT+TGG | + | chr2.2:28359484-28359503 | None:intergenic | 55.0% |
| ! | GAGGTAGGGGAGGTACAAAG+GGG | - | chr2.2:28362930-28362949 | MS.gene066746:intron | 55.0% |
| ! | TCAGCACCTCTTGCTGCTTG+AGG | + | chr2.2:28359491-28359510 | None:intergenic | 55.0% |
| !! | CAAGAGGTGCTGACCACTTC+TGG | - | chr2.2:28359498-28359517 | MS.gene066746:intron | 55.0% |
| !! | GTTACTTCGGGTACTGGCAC+AGG | - | chr2.2:28361090-28361109 | MS.gene066746:intron | 55.0% |
| !!! | GCCCACATTTTTTTGGGCCC+TGG | + | chr2.2:28362185-28362204 | None:intergenic | 55.0% |
| !!! | GTTTTGGGGGATCTGGTCGT+GGG | - | chr2.2:28362864-28362883 | MS.gene066746:intron | 55.0% |
| AGGGAGTGGAGACAGACAGG+AGG | - | chr2.2:28360593-28360612 | MS.gene066746:intron | 60.0% | |
| CAATGGGTAGGGGAGGAACC+TGG | - | chr2.2:28362830-28362849 | MS.gene066746:intron | 60.0% | |
| CAGCCCAGTGTGCTGAGTTC+TGG | - | chr2.2:28360620-28360639 | MS.gene066746:intron | 60.0% | |
| CAGTTGAAGACCGCAGCTGC+TGG | - | chr2.2:28362568-28362587 | MS.gene066746:CDS | 60.0% | |
| CCAGGAGCTGGAAGAGGTAG+GGG | - | chr2.2:28362917-28362936 | MS.gene066746:intron | 60.0% | |
| GGGAATGGGCGATCTGCAGT+AGG | - | chr2.2:28360136-28360155 | MS.gene066746:intron | 60.0% | |
| GGGCACGTCTTGCTGGGAAT+GGG | - | chr2.2:28360122-28360141 | MS.gene066746:intron | 60.0% | |
| GGTACTTGACTCCTTCCCCC+TGG | + | chr2.2:28361063-28361082 | None:intergenic | 60.0% | |
| TACCCTTCTTCGGGACCAGG+GGG | - | chr2.2:28361045-28361064 | MS.gene066746:intron | 60.0% | |
| TGGCCACTGTTTCCACGGCA+TGG | + | chr2.2:28363705-28363724 | None:intergenic | 60.0% | |
| TTCCCCCTGGTCCCGAAGAA+GGG | + | chr2.2:28361050-28361069 | None:intergenic | 60.0% | |
| ! | CTAGAGGGGCACGTCTTGCT+GGG | - | chr2.2:28360116-28360135 | MS.gene066746:intron | 60.0% |
| !! | GGCACAGGTGAGCTTGCTGA+GGG | - | chr2.2:28361105-28361124 | MS.gene066746:intron | 60.0% |
| !! | TGGCACAGGTGAGCTTGCTG+AGG | - | chr2.2:28361104-28361123 | MS.gene066746:intron | 60.0% |
| !!! | CGTTTTGGGGGATCTGGTCG+TGG | - | chr2.2:28362863-28362882 | MS.gene066746:intron | 60.0% |
| CCAGCAAGACGTGCCCCTCT+AGG | + | chr2.2:28360118-28360137 | None:intergenic | 65.0% | |
| CCCCTACCTCTTCCAGCTCC+TGG | + | chr2.2:28362920-28362939 | None:intergenic | 65.0% | |
| CTTCCCCCTGGTCCCGAAGA+AGG | + | chr2.2:28361051-28361070 | None:intergenic | 65.0% | |
| CTTCTTCGGGACCAGGGGGA+AGG | - | chr2.2:28361049-28361068 | MS.gene066746:intron | 65.0% | |
| GGAGCTGGAAGAGGTAGGGG+AGG | - | chr2.2:28362920-28362939 | MS.gene066746:intron | 65.0% | |
| GGGGCACGTCTTGCTGGGAA+TGG | - | chr2.2:28360121-28360140 | MS.gene066746:intron | 65.0% | |
| ! | CCTAGAGGGGCACGTCTTGC+TGG | - | chr2.2:28360115-28360134 | MS.gene066746:intron | 65.0% |
| GTGGGGTGCAGCGACAGGCT+GGG | + | chr2.2:28360762-28360781 | None:intergenic | 70.0% | |
| TGGGGTGCAGCGACAGGCTG+GGG | + | chr2.2:28360761-28360780 | None:intergenic | 70.0% | |
| GGCTGGTGGGGTGCAGCGAC+AGG | + | chr2.2:28360767-28360786 | None:intergenic | 75.0% | |
| GGTGGGGTGCAGCGACAGGC+TGG | + | chr2.2:28360763-28360782 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 28358694 | 28364021 | 28358694 | ID=MS.gene066746 |
| chr2.2 | mRNA | 28358694 | 28364021 | 28358694 | ID=MS.gene066746.t1;Parent=MS.gene066746 |
| chr2.2 | exon | 28363994 | 28364021 | 28363994 | ID=MS.gene066746.t1.exon1;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28363994 | 28364021 | 28363994 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28362433 | 28362641 | 28362433 | ID=MS.gene066746.t1.exon2;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28362433 | 28362641 | 28362433 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28362234 | 28362343 | 28362234 | ID=MS.gene066746.t1.exon3;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28362234 | 28362343 | 28362234 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28361868 | 28362120 | 28361868 | ID=MS.gene066746.t1.exon4;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28361868 | 28362120 | 28361868 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28361488 | 28361706 | 28361488 | ID=MS.gene066746.t1.exon5;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28361488 | 28361706 | 28361488 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28361336 | 28361404 | 28361336 | ID=MS.gene066746.t1.exon6;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28361336 | 28361404 | 28361336 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28359667 | 28359903 | 28359667 | ID=MS.gene066746.t1.exon7;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28359667 | 28359903 | 28359667 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28359506 | 28359574 | 28359506 | ID=MS.gene066746.t1.exon8;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28359506 | 28359574 | 28359506 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28359330 | 28359393 | 28359330 | ID=MS.gene066746.t1.exon9;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28359330 | 28359393 | 28359330 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| chr2.2 | exon | 28358694 | 28358743 | 28358694 | ID=MS.gene066746.t1.exon10;Parent=MS.gene066746.t1 |
| chr2.2 | CDS | 28358694 | 28358743 | 28358694 | ID=cds.MS.gene066746.t1;Parent=MS.gene066746.t1 |
| Gene Sequence |
| Protein sequence |
