Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066012.t1 | XP_003590794.1 | 87.6 | 250 | 31 | 0 | 1 | 250 | 1 | 250 | 4.10E-118 | 434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066012.t1 | Q682V0 | 63.5 | 192 | 70 | 0 | 4 | 195 | 22 | 213 | 2.0e-68 | 260.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066012.t1 | G7I3Z1 | 87.6 | 250 | 31 | 0 | 1 | 250 | 1 | 250 | 3.0e-118 | 434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene066012 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene04919 | MS.gene066012 | 0.833782 | 4.38E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene066012 | 0.853242 | 2.72E-61 | -1.69E-46 |
| MS.gene049283 | MS.gene066012 | 0.826094 | 3.27E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene066012 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene066012 | 0.852334 | 4.94E-61 | -1.69E-46 |
| MS.gene05029 | MS.gene066012 | 0.819099 | 1.39E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene066012 | 0.843127 | 1.70E-58 | -1.69E-46 |
| MS.gene050955 | MS.gene066012 | 0.80227 | 6.07E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene066012 | 0.823341 | 1.46E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene066012 | 0.833934 | 4.01E-56 | -1.69E-46 |
| MS.gene051731 | MS.gene066012 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene066012 | 0.847794 | 9.23E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene066012 | 0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene053228 | MS.gene066012 | 0.832753 | 7.90E-56 | -1.69E-46 |
| MS.gene053879 | MS.gene066012 | 0.805874 | 1.08E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene066012 | 0.832573 | 8.75E-56 | -1.69E-46 |
| MS.gene054413 | MS.gene066012 | 0.802479 | 5.50E-49 | -1.69E-46 |
| MS.gene054957 | MS.gene066012 | 0.825962 | 3.52E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene066012 | 0.874564 | 6.12E-68 | -1.69E-46 |
| MS.gene055801 | MS.gene066012 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene055886 | MS.gene066012 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene056071 | MS.gene066012 | 0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene066012 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene056825 | MS.gene066012 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene066012 | 0.854059 | 1.58E-61 | -1.69E-46 |
| MS.gene057622 | MS.gene066012 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene066012 | 0.825039 | 5.83E-54 | -1.69E-46 |
| MS.gene05878 | MS.gene066012 | 0.820025 | 8.53E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene066012 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene059436 | MS.gene066012 | 0.834786 | 2.45E-56 | -1.69E-46 |
| MS.gene05952 | MS.gene066012 | 0.848744 | 5.04E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene066012 | -0.87175 | 5.39E-67 | -1.69E-46 |
| MS.gene059901 | MS.gene066012 | -0.824777 | 6.72E-54 | -1.69E-46 |
| MS.gene06018 | MS.gene066012 | 0.801905 | 7.22E-49 | -1.69E-46 |
| MS.gene06023 | MS.gene066012 | 0.809338 | 1.99E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene066012 | 0.836617 | 8.42E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene066012 | 0.82222 | 2.66E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene066012 | 0.832452 | 9.38E-56 | -1.69E-46 |
| MS.gene061160 | MS.gene066012 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene066012 | 0.817359 | 3.44E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066012.t1 | MTR_1g075330 | 93.600 | 250 | 16 | 0 | 1 | 250 | 1 | 250 | 6.08e-173 | 479 |
| MS.gene066012.t1 | MTR_1g075380 | 88.889 | 63 | 7 | 0 | 246 | 308 | 9 | 71 | 3.76e-30 | 109 |
| MS.gene066012.t1 | MTR_1g075340 | 85.714 | 63 | 9 | 0 | 246 | 308 | 8 | 70 | 1.50e-29 | 107 |
| MS.gene066012.t1 | MTR_1g075340 | 85.714 | 63 | 9 | 0 | 246 | 308 | 8 | 70 | 1.50e-29 | 107 |
| MS.gene066012.t1 | MTR_1g075410 | 77.465 | 71 | 16 | 0 | 238 | 308 | 2 | 72 | 1.84e-29 | 107 |
| MS.gene066012.t1 | MTR_5g090250 | 82.540 | 63 | 11 | 0 | 246 | 308 | 8 | 70 | 3.50e-27 | 101 |
| MS.gene066012.t1 | MTR_5g090250 | 82.540 | 63 | 11 | 0 | 246 | 308 | 8 | 70 | 3.50e-27 | 101 |
| MS.gene066012.t1 | MTR_1g070335 | 57.143 | 63 | 27 | 0 | 246 | 308 | 8 | 70 | 3.41e-16 | 72.4 |
| MS.gene066012.t1 | MTR_5g045470 | 52.381 | 63 | 30 | 0 | 246 | 308 | 7 | 69 | 1.04e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066012.t1 | AT3G23100 | 58.898 | 236 | 92 | 2 | 4 | 238 | 22 | 253 | 7.53e-96 | 284 |
| MS.gene066012.t1 | AT3G23100 | 58.898 | 236 | 92 | 2 | 4 | 238 | 22 | 253 | 7.53e-96 | 284 |
| MS.gene066012.t1 | AT1G61410 | 53.153 | 111 | 47 | 2 | 129 | 238 | 1 | 107 | 6.33e-28 | 105 |
| MS.gene066012.t1 | AT5G43580 | 48.052 | 77 | 38 | 1 | 232 | 308 | 25 | 99 | 5.30e-16 | 72.8 |
| MS.gene066012.t1 | AT2G38870 | 52.381 | 63 | 30 | 0 | 246 | 308 | 8 | 70 | 3.03e-15 | 69.7 |
| MS.gene066012.t1 | AT2G38900 | 45.070 | 71 | 37 | 1 | 238 | 308 | 20 | 88 | 5.93e-12 | 61.2 |
| MS.gene066012.t1 | AT3G46860 | 39.024 | 82 | 43 | 1 | 227 | 308 | 11 | 85 | 3.03e-11 | 59.3 |
| MS.gene066012.t1 | AT2G38900 | 46.032 | 63 | 34 | 0 | 246 | 308 | 11 | 73 | 5.02e-11 | 58.2 |
Find 73 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGTCTGAGCGGTATT+TGG | 0.234417 | 1.2:+58068068 | MS.gene066012:CDS |
| AAAAGTGTATTACTAGTTCT+TGG | 0.254859 | 1.2:+58071867 | MS.gene066012:CDS |
| CAACGACAGGGTTTGGGTTT+GGG | 0.289389 | 1.2:+58073308 | MS.gene066012:CDS |
| GAATTGTCTGAGCGGTATTT+GGG | 0.316473 | 1.2:+58068069 | MS.gene066012:CDS |
| GCAACGACAGGGTTTGGGTT+TGG | 0.327218 | 1.2:+58073307 | MS.gene066012:CDS |
| GAAAACTACGGCAGAAATAT+TGG | 0.327822 | 1.2:+58068971 | MS.gene066012:CDS |
| GACACTTTCTATCCAATTGT+TGG | 0.347121 | 1.2:-58073360 | None:intergenic |
| ACTTACGCAACGACAGGGTT+TGG | 0.351229 | 1.2:+58073301 | MS.gene066012:CDS |
| CTTACGCAACGACAGGGTTT+GGG | 0.360903 | 1.2:+58073302 | MS.gene066012:CDS |
| GTCACTCAGGTTCCAACAAT+TGG | 0.363160 | 1.2:+58073348 | MS.gene066012:CDS |
| TTCAAATTCCACCCTTTCAT+TGG | 0.363589 | 1.2:-58071354 | None:intergenic |
| CACGAATATTGATTCTTCTT+CGG | 0.369660 | 1.2:-58067824 | None:intergenic |
| TATTTGGGGTTTCGACAACC+TGG | 0.386028 | 1.2:+58068084 | MS.gene066012:CDS |
| GTTTATGCATTTGCTGATGC+TGG | 0.406007 | 1.2:+58068111 | MS.gene066012:CDS |
| TCACCGACGGTTTCACCGCT+TGG | 0.415773 | 1.2:+58067884 | MS.gene066012:CDS |
| TGGGTTTGGGTTAATAAAGA+TGG | 0.418377 | 1.2:+58073321 | MS.gene066012:CDS |
| CCTTCCACTCCAACCAACTC+TGG | 0.454716 | 1.2:-58073195 | None:intergenic |
| CAATATTCGTGAAGGGTACA+TGG | 0.456988 | 1.2:+58067836 | MS.gene066012:CDS |
| ACTAGTTCTTGGAAGGATGT+TGG | 0.457050 | 1.2:+58071878 | MS.gene066012:CDS |
| TGCTGCTCAGTGGGACCAGC+CGG | 0.460985 | 1.2:+58068032 | MS.gene066012:CDS |
| TTCTCATGGATGCAAACATA+AGG | 0.465523 | 1.2:+58068997 | MS.gene066012:CDS |
| AATGCCATCATTGTGCTAGA+AGG | 0.471882 | 1.2:+58073261 | MS.gene066012:CDS |
| ATGCTGGTGATGCTCATAAG+AGG | 0.491015 | 1.2:+58068127 | MS.gene066012:CDS |
| AGAAATATTGGACTTTCTCA+TGG | 0.495276 | 1.2:+58068983 | MS.gene066012:CDS |
| AGCGGTGAAACCGTCGGTGA+TGG | 0.496517 | 1.2:-58067881 | None:intergenic |
| GAAGCAGCGTGCTGCTCAGT+GGG | 0.503408 | 1.2:+58068023 | MS.gene066012:CDS |
| CCAGAGTTGGTTGGAGTGGA+AGG | 0.515293 | 1.2:+58073195 | MS.gene066012:CDS |
| TGTTCTCAGCTAAGAGCTCA+TGG | 0.516002 | 1.2:+58073172 | MS.gene066012:intron |
| GAATGACACTGCATTGGAGA+TGG | 0.516889 | 1.2:+58068922 | MS.gene066012:CDS |
| CCGACGACTTACGCAACGAC+AGG | 0.517888 | 1.2:+58073295 | MS.gene066012:CDS |
| GTGAGAGAATAGCCAATGAA+AGG | 0.523831 | 1.2:+58071342 | MS.gene066012:CDS |
| GTTGGTTGGAGTGGAAGGAA+AGG | 0.527079 | 1.2:+58073200 | MS.gene066012:CDS |
| AGATCCTTCTAGCACAATGA+TGG | 0.537596 | 1.2:-58073265 | None:intergenic |
| AGGGAGGAATGACACTGCAT+TGG | 0.540751 | 1.2:+58068916 | MS.gene066012:CDS |
| GTGTATTACTAGTTCTTGGA+AGG | 0.546840 | 1.2:+58071871 | MS.gene066012:CDS |
| TGAGAGAATAGCCAATGAAA+GGG | 0.557370 | 1.2:+58071343 | MS.gene066012:CDS |
| AGAAGAATCAATATTCGTGA+AGG | 0.557463 | 1.2:+58067828 | MS.gene066012:CDS |
| CCACGTACTCTTCCACCGGC+TGG | 0.560726 | 1.2:-58068047 | None:intergenic |
| GTTGTCGTGGACGTTTGAGA+AGG | 0.561969 | 1.2:+58068896 | MS.gene066012:intron |
| ATGGCCAGAGTTGGTTGGAG+TGG | 0.564909 | 1.2:+58073191 | MS.gene066012:CDS |
| ATTAGAAGCTGAGAAGTGCT+TGG | 0.565059 | 1.2:+58071313 | MS.gene066012:CDS |
| AATTCAGAGGGAGAATCCAT+TGG | 0.572843 | 1.2:+58073236 | MS.gene066012:CDS |
| TAAGAGCTCATGGCCAGAGT+TGG | 0.573671 | 1.2:+58073182 | MS.gene066012:CDS |
| CAGCTGTCAAAACAAGATAA+CGG | 0.575664 | 1.2:+58071755 | MS.gene066012:CDS |
| AGCTCATGGCCAGAGTTGGT+TGG | 0.578782 | 1.2:+58073186 | MS.gene066012:CDS |
| TTCAACCTCTCCATCACCGA+CGG | 0.579618 | 1.2:+58067871 | MS.gene066012:CDS |
| ATTTGGGGTTTCGACAACCT+GGG | 0.580929 | 1.2:+58068085 | MS.gene066012:CDS |
| TTGTCGTGGACGTTTGAGAA+GGG | 0.583754 | 1.2:+58068897 | MS.gene066012:CDS |
| TAAAGATGGAATTGTCACTC+AGG | 0.589757 | 1.2:+58073335 | MS.gene066012:CDS |
| TGTGAATGTTGCAGTTGTCG+TGG | 0.589936 | 1.2:+58068883 | MS.gene066012:intron |
| TCCTGATTGTAAGAAAACTA+CGG | 0.591527 | 1.2:+58068959 | MS.gene066012:CDS |
| TGCTCAGTGGGACCAGCCGG+TGG | 0.593157 | 1.2:+58068035 | MS.gene066012:CDS |
| GAAGAATCAATATTCGTGAA+GGG | 0.593164 | 1.2:+58067829 | MS.gene066012:CDS |
| AGCAGAAGCTACAATTCAGA+GGG | 0.593359 | 1.2:+58073224 | MS.gene066012:CDS |
| TAGCAGAAGCTACAATTCAG+AGG | 0.596029 | 1.2:+58073223 | MS.gene066012:CDS |
| CGGCAACAAATCTCTTCAAG+AGG | 0.596675 | 1.2:+58071775 | MS.gene066012:CDS |
| AATTCCACGTACTCTTCCAC+CGG | 0.602320 | 1.2:-58068051 | None:intergenic |
| TGAATCTCAAATCTATACAA+AGG | 0.608331 | 1.2:+58071373 | MS.gene066012:CDS |
| TGAAACCGTCGGTGATGGAG+AGG | 0.615675 | 1.2:-58067876 | None:intergenic |
| CCTGTCGTTGCGTAAGTCGT+CGG | 0.616539 | 1.2:-58073295 | None:intergenic |
| TGAAGCAGCGTGCTGCTCAG+TGG | 0.619678 | 1.2:+58068022 | MS.gene066012:CDS |
| CCAGCCGGTGGAAGAGTACG+TGG | 0.619854 | 1.2:+58068047 | MS.gene066012:CDS |
| CGACGACTTACGCAACGACA+GGG | 0.619969 | 1.2:+58073296 | MS.gene066012:CDS |
| TCGTGGACGTTTGAGAAGGG+AGG | 0.620819 | 1.2:+58068900 | MS.gene066012:CDS |
| GTTCCAAGCGGTGAAACCGT+CGG | 0.634326 | 1.2:-58067887 | None:intergenic |
| TTCACCGCTTGGAACTGCAA+CGG | 0.635648 | 1.2:+58067895 | MS.gene066012:CDS |
| GCAAATGCATAAACAGACCC+AGG | 0.643154 | 1.2:-58068102 | None:intergenic |
| AATTGTCTGAGCGGTATTTG+GGG | 0.650141 | 1.2:+58068070 | MS.gene066012:CDS |
| ACAATGATGGCATTCACCAA+TGG | 0.650325 | 1.2:-58073252 | None:intergenic |
| GAGAATAGCCAATGAAAGGG+TGG | 0.673255 | 1.2:+58071346 | MS.gene066012:CDS |
| TGCTGGTGATGCTCATAAGA+GGG | 0.680650 | 1.2:+58068128 | MS.gene066012:CDS |
| AGTACCGTTGCAGTTCCAAG+CGG | 0.722808 | 1.2:-58067899 | None:intergenic |
| AGTACGTGGAATTGTCTGAG+CGG | 0.752537 | 1.2:+58068061 | MS.gene066012:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCAAAAAAAAAATTGT+TGG | - | chr1.2:58070763-58070782 | None:intergenic | 10.0% |
| !! | ATCAAAAAAAAAAAAATTGT+TGG | - | chr1.2:58070611-58070630 | None:intergenic | 10.0% |
| !! | GATATGAATAATAAATTAAA+TGG | + | chr1.2:58073102-58073121 | MS.gene066012:intron | 10.0% |
| !!! | AAACATATTTTTTTTTGTTT+TGG | - | chr1.2:58068424-58068443 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATTGTTGGAT+TGG | - | chr1.2:58070606-58070625 | None:intergenic | 15.0% |
| !! | AAACAGAATGATATAAAAAA+TGG | - | chr1.2:58068802-58068821 | None:intergenic | 15.0% |
| !! | ATAAAAGTTAGTTAGTTAAT+TGG | - | chr1.2:58071201-58071220 | None:intergenic | 15.0% |
| !! | ATGTTCAAAACTAAATAAAA+GGG | - | chr1.2:58070956-58070975 | None:intergenic | 15.0% |
| !! | TCTATAATCTATAATATATG+TGG | + | chr1.2:58072423-58072442 | MS.gene066012:intron | 15.0% |
| !! | TCTTCTATTTATGTATAAAA+GGG | - | chr1.2:58071039-58071058 | None:intergenic | 15.0% |
| !!! | AATTTTTTTAGGTAACAAAA+TGG | - | chr1.2:58072771-58072790 | None:intergenic | 15.0% |
| !!! | ATTTAAAATTTCTACCTAAA+TGG | - | chr1.2:58069510-58069529 | None:intergenic | 15.0% |
| !!! | ATTTTTACAAAAGATGATTA+AGG | - | chr1.2:58070656-58070675 | None:intergenic | 15.0% |
| !!! | CTTTTCTCAAATTATTATTA+AGG | - | chr1.2:58068211-58068230 | None:intergenic | 15.0% |
| !!! | GCATATATGTTAATTTTTTT+AGG | - | chr1.2:58072782-58072801 | None:intergenic | 15.0% |
| !!! | TAGAAATTTTAAATTACAGT+TGG | + | chr1.2:58069516-58069535 | MS.gene066012:intron | 15.0% |
| !!! | TAGTGTTAATTTTTTGAAAT+AGG | + | chr1.2:58068490-58068509 | MS.gene066012:intron | 15.0% |
| !! | AAAAAAAAAAACTGTTGGAT+TGG | - | chr1.2:58070393-58070412 | None:intergenic | 20.0% |
| !! | AAAATAGTCATACATATTGA+AGG | + | chr1.2:58073016-58073035 | MS.gene066012:intron | 20.0% |
| !! | AAAATGCATATAATCAAACA+TGG | - | chr1.2:58070988-58071007 | None:intergenic | 20.0% |
| !! | AAACTAGAAAAATAAGAAAC+AGG | - | chr1.2:58070144-58070163 | None:intergenic | 20.0% |
| !! | AAGGTAATTAATAATGTAAG+AGG | - | chr1.2:58069607-58069626 | None:intergenic | 20.0% |
| !! | AATAGGAATGTAATGTTTAA+CGG | + | chr1.2:58069171-58069190 | MS.gene066012:intron | 20.0% |
| !! | AATTGCAAAAAGAAAGAAAA+AGG | + | chr1.2:58072988-58073007 | MS.gene066012:intron | 20.0% |
| !! | AGTTTCAATATCCATAAAAT+AGG | - | chr1.2:58070079-58070098 | None:intergenic | 20.0% |
| !! | ATAATATGAAGTGAAATAGA+AGG | + | chr1.2:58068463-58068482 | MS.gene066012:intron | 20.0% |
| !! | ATACAAGAAAAGATAAGAAT+TGG | - | chr1.2:58072640-58072659 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAATTGTTGGAT+TGG | - | chr1.2:58070758-58070777 | None:intergenic | 20.0% |
| !! | CTCTTCTATTTATGTATAAA+AGG | - | chr1.2:58071040-58071059 | None:intergenic | 20.0% |
| !! | GAACACAATATGATTAAATA+AGG | - | chr1.2:58069479-58069498 | None:intergenic | 20.0% |
| !! | GATCAAAAAAAAAAAACTGT+TGG | - | chr1.2:58070541-58070560 | None:intergenic | 20.0% |
| !! | GATGTTCAAAACTAAATAAA+AGG | - | chr1.2:58070957-58070976 | None:intergenic | 20.0% |
| !! | GTAATAAAAAAAAACCCATA+AGG | + | chr1.2:58072899-58072918 | MS.gene066012:intron | 20.0% |
| !! | TAACAAAATGGTTATAGAAT+TGG | - | chr1.2:58072759-58072778 | None:intergenic | 20.0% |
| !! | TACAAAAAATAACAAACAGT+TGG | - | chr1.2:58068160-58068179 | None:intergenic | 20.0% |
| !! | TCTTAAACTTGAGTAAATAT+GGG | + | chr1.2:58069993-58070012 | MS.gene066012:intron | 20.0% |
| !! | TGATCAAAAAAAAAAACTGT+TGG | - | chr1.2:58070398-58070417 | None:intergenic | 20.0% |
| !!! | ACTACTTATTTTATGTGAAA+TGG | + | chr1.2:58069235-58069254 | MS.gene066012:intron | 20.0% |
| !!! | AGTGTATTTATAGTAGTTTT+TGG | - | chr1.2:58072931-58072950 | None:intergenic | 20.0% |
| !!! | GTTGAATTTTTTTTTAGCAT+CGG | + | chr1.2:58067990-58068009 | MS.gene066012:intron | 20.0% |
| !!! | TATCAAAAAGATACATTTTG+TGG | - | chr1.2:58069929-58069948 | None:intergenic | 20.0% |
| !!! | TATGGGTTTTTTTTTATTAC+AGG | - | chr1.2:58072899-58072918 | None:intergenic | 20.0% |
| !!! | TGATTTTGATTTTGATTTGT+GGG | + | chr1.2:58067964-58067983 | MS.gene066012:intron | 20.0% |
| !!! | TTGATTTTGATTTTGATTTG+TGG | + | chr1.2:58067963-58067982 | MS.gene066012:intron | 20.0% |
| !!! | TTTTTTTTTGATCATTCACA+TGG | + | chr1.2:58070404-58070423 | MS.gene066012:intron | 20.0% |
| ! | AAACATAGCTAGAACTAAAT+TGG | + | chr1.2:58069441-58069460 | MS.gene066012:intron | 25.0% |
| ! | AAAGTTAGTTAGTTAATTGG+AGG | - | chr1.2:58071198-58071217 | None:intergenic | 25.0% |
| ! | AACATAGCTAGAACTAAATT+GGG | + | chr1.2:58069442-58069461 | MS.gene066012:intron | 25.0% |
| ! | AATTGAATACAACAACAAAC+TGG | - | chr1.2:58069308-58069327 | None:intergenic | 25.0% |
| ! | AGTGAGATGAAATTCAAAAA+AGG | - | chr1.2:58069962-58069981 | None:intergenic | 25.0% |
| ! | ATAATACACAAGTCAAATGA+TGG | + | chr1.2:58072850-58072869 | MS.gene066012:intron | 25.0% |
| ! | ATGTGAATAACTGTATGAAT+CGG | - | chr1.2:58070336-58070355 | None:intergenic | 25.0% |
| ! | ATTGAATACAACAACAAACT+GGG | - | chr1.2:58069307-58069326 | None:intergenic | 25.0% |
| ! | CTTAAACTTGAGTAAATATG+GGG | + | chr1.2:58069994-58070013 | MS.gene066012:intron | 25.0% |
| ! | GAAAAACAAATACATTGGTA+AGG | - | chr1.2:58068701-58068720 | None:intergenic | 25.0% |
| ! | GTAATTATATTTGTCAGTGT+CGG | + | chr1.2:58068244-58068263 | MS.gene066012:intron | 25.0% |
| ! | GTCTTAAACTTGAGTAAATA+TGG | + | chr1.2:58069992-58070011 | MS.gene066012:intron | 25.0% |
| ! | GTTAATATCAACTACTGTAA+TGG | + | chr1.2:58070183-58070202 | MS.gene066012:intron | 25.0% |
| ! | TAAAACAACAAGGTAAAATG+AGG | - | chr1.2:58071581-58071600 | None:intergenic | 25.0% |
| ! | TACATATTGAAGGATCAAAA+AGG | + | chr1.2:58073026-58073045 | MS.gene066012:intron | 25.0% |
| ! | TCATGAAAATGTCAAATTTC+AGG | - | chr1.2:58069658-58069677 | None:intergenic | 25.0% |
| ! | TCGAAGAAAAACAAATACAT+TGG | - | chr1.2:58068706-58068725 | None:intergenic | 25.0% |
| ! | TGAAACTTAAAGTATGTCAA+TGG | + | chr1.2:58070092-58070111 | MS.gene066012:intron | 25.0% |
| ! | TGAAATATGCTATACTATCA+AGG | + | chr1.2:58069675-58069694 | MS.gene066012:intron | 25.0% |
| ! | TGAAGATAGATTAGTGAAAA+GGG | - | chr1.2:58067939-58067958 | None:intergenic | 25.0% |
| ! | TGAATCTCAAATCTATACAA+AGG | + | chr1.2:58071373-58071392 | MS.gene066012:CDS | 25.0% |
| ! | TGATCCAGATATGTATTTAA+GGG | - | chr1.2:58068400-58068419 | None:intergenic | 25.0% |
| ! | TGCAAATCTAAAAACAATGT+CGG | + | chr1.2:58072392-58072411 | MS.gene066012:intron | 25.0% |
| ! | TGTACAAAATTCACTTAAGT+TGG | + | chr1.2:58072021-58072040 | MS.gene066012:intron | 25.0% |
| ! | TGTTTATTATGGTTATTGCT+TGG | + | chr1.2:58069117-58069136 | MS.gene066012:intron | 25.0% |
| ! | TTCAAAACTAAATAAAAGGG+AGG | - | chr1.2:58070953-58070972 | None:intergenic | 25.0% |
| ! | TTGAAGATAGATTAGTGAAA+AGG | - | chr1.2:58067940-58067959 | None:intergenic | 25.0% |
| ! | TTGATCCAGATATGTATTTA+AGG | - | chr1.2:58068401-58068420 | None:intergenic | 25.0% |
| ! | TTGTACAAATATGAAATCCA+TGG | - | chr1.2:58072008-58072027 | None:intergenic | 25.0% |
| !! | AAAAGTGTATTACTAGTTCT+TGG | + | chr1.2:58071867-58071886 | MS.gene066012:CDS | 25.0% |
| !! | AATAAGTTGGCTGTTATTTA+TGG | + | chr1.2:58069797-58069816 | MS.gene066012:intron | 25.0% |
| !! | AATTGGAGGTTGTTATTATA+GGG | - | chr1.2:58071184-58071203 | None:intergenic | 25.0% |
| !! | ATACAGGTCAAAATTTTCAA+TGG | - | chr1.2:58071440-58071459 | None:intergenic | 25.0% |
| !! | ATTGATTAGATATTTTCCGA+TGG | - | chr1.2:58068757-58068776 | None:intergenic | 25.0% |
| !! | GAATCAATATGCCTATTTTA+TGG | + | chr1.2:58070065-58070084 | MS.gene066012:intron | 25.0% |
| !! | GTTTCTCGATTTGTTTATTA+TGG | + | chr1.2:58069106-58069125 | MS.gene066012:intron | 25.0% |
| !! | TAATTGGAGGTTGTTATTAT+AGG | - | chr1.2:58071185-58071204 | None:intergenic | 25.0% |
| !! | TATGTGAAATGGTTTTTGAT+AGG | + | chr1.2:58069246-58069265 | MS.gene066012:intron | 25.0% |
| !! | TTTTATTACAGGAATCTCAT+AGG | - | chr1.2:58072888-58072907 | None:intergenic | 25.0% |
| !!! | AAAAGCATCATAAAACAACA+AGG | - | chr1.2:58071591-58071610 | None:intergenic | 25.0% |
| !!! | AACCATTTTTTGACAACTTT+TGG | + | chr1.2:58072209-58072228 | MS.gene066012:intron | 25.0% |
| !!! | ATTGAAAATTTTGACCTGTA+TGG | + | chr1.2:58071439-58071458 | MS.gene066012:intron | 25.0% |
| !!! | GATTTTGATTTTGATTTGTG+GGG | + | chr1.2:58067965-58067984 | MS.gene066012:intron | 25.0% |
| !!! | GTATAAAAGGGTTATTTCTT+TGG | - | chr1.2:58071027-58071046 | None:intergenic | 25.0% |
| !!! | GTTATTCTGTTTTAGTTTCT+GGG | + | chr1.2:58071689-58071708 | MS.gene066012:intron | 25.0% |
| !!! | TGTTATTCTGTTTTAGTTTC+TGG | + | chr1.2:58071688-58071707 | MS.gene066012:intron | 25.0% |
| !!! | TTAGTTTTGAACATCATAGT+TGG | + | chr1.2:58070962-58070981 | MS.gene066012:intron | 25.0% |
| AAAAATAACAAACAGTTGGC+AGG | - | chr1.2:58068156-58068175 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGATAA+AGG | - | chr1.2:58072281-58072300 | None:intergenic | 30.0% | |
| AAAACTAAATAAAAGGGAGG+AGG | - | chr1.2:58070950-58070969 | None:intergenic | 30.0% | |
| AAAAGTGAAACCATAGTTCT+AGG | - | chr1.2:58072108-58072127 | None:intergenic | 30.0% | |
| AAAATGTCTGATGAATGCAA+AGG | + | chr1.2:58073055-58073074 | MS.gene066012:intron | 30.0% | |
| AAACTAAATAAAAGGGAGGA+GGG | - | chr1.2:58070949-58070968 | None:intergenic | 30.0% | |
| AACTTAAAGTATGTCAATGG+AGG | + | chr1.2:58070095-58070114 | MS.gene066012:intron | 30.0% | |
| AAGGCATGTGATATACAAAA+TGG | - | chr1.2:58069742-58069761 | None:intergenic | 30.0% | |
| AATCTAAAAACAATGTCGGT+AGG | + | chr1.2:58072396-58072415 | MS.gene066012:intron | 30.0% | |
| AATGTTTAACGGTGTGAAAT+TGG | + | chr1.2:58069182-58069201 | MS.gene066012:intron | 30.0% | |
| ACAAACACGTCATAAAGATA+AGG | - | chr1.2:58072676-58072695 | None:intergenic | 30.0% | |
| AGAAATATTGGACTTTCTCA+TGG | + | chr1.2:58068983-58069002 | MS.gene066012:CDS | 30.0% | |
| AGAAGAATCAATATTCGTGA+AGG | + | chr1.2:58067828-58067847 | MS.gene066012:CDS | 30.0% | |
| AGGTAAAATGAGGTCAATAT+TGG | - | chr1.2:58071571-58071590 | None:intergenic | 30.0% | |
| AGTAGTGACTCTATTATGAA+GGG | - | chr1.2:58071085-58071104 | None:intergenic | 30.0% | |
| ATATGGCAATAAGGAACATA+TGG | - | chr1.2:58070030-58070049 | None:intergenic | 30.0% | |
| ATGTGAATGACTGTATGAAT+CGG | - | chr1.2:58070479-58070498 | None:intergenic | 30.0% | |
| ATTGTAAAGGCTTATCAAAC+CGG | + | chr1.2:58068339-58068358 | MS.gene066012:intron | 30.0% | |
| CACACATGTTAAATCCAAAA+TGG | + | chr1.2:58072697-58072716 | MS.gene066012:intron | 30.0% | |
| CTGCAGTAAACATATTGTAA+AGG | + | chr1.2:58068326-58068345 | MS.gene066012:intron | 30.0% | |
| GAAATGAGACACAAATAAGT+TGG | + | chr1.2:58069784-58069803 | MS.gene066012:intron | 30.0% | |
| GAACTCTGTTATTATCTACA+CGG | - | chr1.2:58072552-58072571 | None:intergenic | 30.0% | |
| GAAGAATCAATATTCGTGAA+GGG | + | chr1.2:58067829-58067848 | MS.gene066012:CDS | 30.0% | |
| GATCCAGATATGTATTTAAG+GGG | - | chr1.2:58068399-58068418 | None:intergenic | 30.0% | |
| GATTCATACAGTTATTCACA+TGG | + | chr1.2:58070335-58070354 | MS.gene066012:intron | 30.0% | |
| GGAAGAAGTTGTCATAAAAA+CGG | + | chr1.2:58071271-58071290 | MS.gene066012:intron | 30.0% | |
| GGAATGAAACAATGATATAC+AGG | - | chr1.2:58069286-58069305 | None:intergenic | 30.0% | |
| GTCCAAAAGTTGTCAAAAAA+TGG | - | chr1.2:58072214-58072233 | None:intergenic | 30.0% | |
| GTGTTCAAATTCTACCATTT+AGG | + | chr1.2:58069493-58069512 | MS.gene066012:intron | 30.0% | |
| TAGACTCACATGACAAATTA+GGG | + | chr1.2:58071931-58071950 | MS.gene066012:intron | 30.0% | |
| TAGTAGTGACTCTATTATGA+AGG | - | chr1.2:58071086-58071105 | None:intergenic | 30.0% | |
| TATCAACAGATCATAACAGT+TGG | + | chr1.2:58069830-58069849 | MS.gene066012:intron | 30.0% | |
| TATTACCATGCTTGATTGTA+GGG | - | chr1.2:58072164-58072183 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr1.2:58072332-58072351 | MS.gene066012:intron | 30.0% | |
| TCCTGATTGTAAGAAAACTA+CGG | + | chr1.2:58068959-58068978 | MS.gene066012:CDS | 30.0% | |
| TTCCGTGATATCGTAAAATT+TGG | + | chr1.2:58072822-58072841 | MS.gene066012:intron | 30.0% | |
| TTCTCATTGGTCAAAAACAA+TGG | - | chr1.2:58072294-58072313 | None:intergenic | 30.0% | |
| TTCTCTCAAGATTAGAATTG+AGG | - | chr1.2:58069416-58069435 | None:intergenic | 30.0% | |
| TTTGCAATTCTTCTTGTGTT+TGG | - | chr1.2:58072977-58072996 | None:intergenic | 30.0% | |
| ! | AAAGTGAAACCATAGTTCTA+GGG | - | chr1.2:58072107-58072126 | None:intergenic | 30.0% |
| ! | AGTAGTTGATATTAACGATG+TGG | - | chr1.2:58070179-58070198 | None:intergenic | 30.0% |
| ! | ATGGTTTTTGATAGGTGAAA+TGG | + | chr1.2:58069254-58069273 | MS.gene066012:intron | 30.0% |
| ! | GAACTAGTAATACACTTTTG+AGG | - | chr1.2:58071866-58071885 | None:intergenic | 30.0% |
| ! | GTAGTTGATATTAACGATGT+GGG | - | chr1.2:58070178-58070197 | None:intergenic | 30.0% |
| ! | GTCCAAATTTTACGATATCA+CGG | - | chr1.2:58072827-58072846 | None:intergenic | 30.0% |
| ! | TATTTTGCATGACTGTTCAA+AGG | - | chr1.2:58072574-58072593 | None:intergenic | 30.0% |
| ! | TTTTCAAATCCTGCTTGATT+TGG | + | chr1.2:58070897-58070916 | MS.gene066012:intron | 30.0% |
| !! | ATTTGTTTTTCTTCGATGTG+AGG | + | chr1.2:58068710-58068729 | MS.gene066012:intron | 30.0% |
| !! | CACGAATATTGATTCTTCTT+CGG | - | chr1.2:58067827-58067846 | None:intergenic | 30.0% |
| !! | GAAGTTGTCTTTTTCATCTT+TGG | - | chr1.2:58069891-58069910 | None:intergenic | 30.0% |
| !! | GGATGATAATGGTAACAAAT+AGG | + | chr1.2:58069154-58069173 | MS.gene066012:intron | 30.0% |
| !! | TTCTTTGGAATCGAATTCTT+GGG | - | chr1.2:58071012-58071031 | None:intergenic | 30.0% |
| !! | TTGTTTTTCTCACTTCTCAT+TGG | - | chr1.2:58072307-58072326 | None:intergenic | 30.0% |
| !! | TTTCTTTGGAATCGAATTCT+TGG | - | chr1.2:58071013-58071032 | None:intergenic | 30.0% |
| !! | TTTGTTTTTCTTCGATGTGA+GGG | + | chr1.2:58068711-58068730 | MS.gene066012:intron | 30.0% |
| !!! | ATTGGTAAGGTTTTAAACAG+AGG | - | chr1.2:58068688-58068707 | None:intergenic | 30.0% |
| !!! | CAAAACTCTCAGTTTTTTCT+GGG | - | chr1.2:58071808-58071827 | None:intergenic | 30.0% |
| !!! | TCAAAACTCTCAGTTTTTTC+TGG | - | chr1.2:58071809-58071828 | None:intergenic | 30.0% |
| !!! | TGTTTTGGGAGTTAGAATAA+TGG | - | chr1.2:58071245-58071264 | None:intergenic | 30.0% |
| AAACACGAAACATACAAGTG+AGG | - | chr1.2:58069090-58069109 | None:intergenic | 35.0% | |
| AACATAACCTAATGCTAAGC+TGG | + | chr1.2:58069543-58069562 | MS.gene066012:intron | 35.0% | |
| ACTATCAAGGATCTACTAAG+TGG | + | chr1.2:58069688-58069707 | MS.gene066012:intron | 35.0% | |
| AGAACCATCATATGGCAATA+AGG | - | chr1.2:58070039-58070058 | None:intergenic | 35.0% | |
| AGACTCACATGACAAATTAG+GGG | + | chr1.2:58071932-58071951 | MS.gene066012:intron | 35.0% | |
| ATGAGACAGAGATATCACAA+GGG | - | chr1.2:58072059-58072078 | None:intergenic | 35.0% | |
| ATTACCATGCTTGATTGTAG+GGG | - | chr1.2:58072163-58072182 | None:intergenic | 35.0% | |
| CAACCCCTTAAATACATATC+TGG | + | chr1.2:58068393-58068412 | MS.gene066012:intron | 35.0% | |
| CACCAACTCTTCTAATCAAA+AGG | - | chr1.2:58068273-58068292 | None:intergenic | 35.0% | |
| CACCATTGAATATTCAGTCA+CGG | + | chr1.2:58068826-58068845 | MS.gene066012:intron | 35.0% | |
| CAGCTGTCAAAACAAGATAA+CGG | + | chr1.2:58071755-58071774 | MS.gene066012:CDS | 35.0% | |
| CATTAATAGCCAGTAGTGAA+AGG | - | chr1.2:58068859-58068878 | None:intergenic | 35.0% | |
| CTAGACTCACATGACAAATT+AGG | + | chr1.2:58071930-58071949 | MS.gene066012:intron | 35.0% | |
| GAAAACTACGGCAGAAATAT+TGG | + | chr1.2:58068971-58068990 | MS.gene066012:CDS | 35.0% | |
| GAATCTCATAGGTTGTTGAA+CGG | - | chr1.2:58072877-58072896 | None:intergenic | 35.0% | |
| GATTCATACAGTCATTCACA+TGG | + | chr1.2:58070478-58070497 | MS.gene066012:intron | 35.0% | |
| GTATTACCATGCTTGATTGT+AGG | - | chr1.2:58072165-58072184 | None:intergenic | 35.0% | |
| GTCATAGAATGTGGTATGAT+TGG | + | chr1.2:58068292-58068311 | MS.gene066012:intron | 35.0% | |
| GTGTGAAATTGGAGTTCAAA+AGG | + | chr1.2:58069193-58069212 | MS.gene066012:intron | 35.0% | |
| GTTATTATCTACACGGAACT+TGG | - | chr1.2:58072545-58072564 | None:intergenic | 35.0% | |
| TAAAGATGGAATTGTCACTC+AGG | + | chr1.2:58073335-58073354 | MS.gene066012:CDS | 35.0% | |
| TATGAGACAGAGATATCACA+AGG | - | chr1.2:58072060-58072079 | None:intergenic | 35.0% | |
| TATTATGAAGGGTAAACCCT+CGG | - | chr1.2:58071074-58071093 | None:intergenic | 35.0% | |
| TGAAATTGGAGTTCAAAAGG+AGG | + | chr1.2:58069196-58069215 | MS.gene066012:intron | 35.0% | |
| TGAGAGAATAGCCAATGAAA+GGG | + | chr1.2:58071343-58071362 | MS.gene066012:CDS | 35.0% | |
| TGTATGAATATGACCAGACA+AGG | - | chr1.2:58069761-58069780 | None:intergenic | 35.0% | |
| TGTTCCTTATTGCCATATGA+TGG | + | chr1.2:58070032-58070051 | MS.gene066012:intron | 35.0% | |
| TTAAGTAGTGCTTGCGTTAA+TGG | + | chr1.2:58068570-58068589 | MS.gene066012:intron | 35.0% | |
| TTCAAATTCCACCCTTTCAT+TGG | - | chr1.2:58071357-58071376 | None:intergenic | 35.0% | |
| TTCTCATGGATGCAAACATA+AGG | + | chr1.2:58068997-58069016 | MS.gene066012:CDS | 35.0% | |
| TTTATGACAACTTCTTCCTG+TGG | - | chr1.2:58071269-58071288 | None:intergenic | 35.0% | |
| ! | ACATTTTGTGGCTTTCTATG+AGG | - | chr1.2:58069917-58069936 | None:intergenic | 35.0% |
| ! | ATGAATCGGCCAATTTTCTT+TGG | - | chr1.2:58070322-58070341 | None:intergenic | 35.0% |
| ! | CTTGACAATTTGTTCTCACT+AGG | - | chr1.2:58072734-58072753 | None:intergenic | 35.0% |
| ! | GTGTATTACTAGTTCTTGGA+AGG | + | chr1.2:58071871-58071890 | MS.gene066012:CDS | 35.0% |
| ! | TCAAATATGGTTGATGTGTG+TGG | + | chr1.2:58068611-58068630 | MS.gene066012:intron | 35.0% |
| ! | TGGGTTTGGGTTAATAAAGA+TGG | + | chr1.2:58073321-58073340 | MS.gene066012:CDS | 35.0% |
| ! | TTTTCGTATGAACGAGATCA+GGG | + | chr1.2:58070856-58070875 | MS.gene066012:intron | 35.0% |
| ! | TTTTGACCTGTATGGTTTAC+CGG | + | chr1.2:58071447-58071466 | MS.gene066012:intron | 35.0% |
| !! | AAGTGAAACCATAGTTCTAG+GGG | - | chr1.2:58072106-58072125 | None:intergenic | 35.0% |
| !! | GTTTCGATTTTCAAAGCGTT+GGG | - | chr1.2:58072523-58072542 | None:intergenic | 35.0% |
| !! | TGCCTTTTGATTAGAAGAGT+TGG | + | chr1.2:58068268-58068287 | MS.gene066012:intron | 35.0% |
| !! | TTTTGGGCTAGATATTCCAT+CGG | + | chr1.2:58068738-58068757 | MS.gene066012:intron | 35.0% |
| !!! | AGTTTTTGGTAGCAACCTTA+TGG | - | chr1.2:58072917-58072936 | None:intergenic | 35.0% |
| !!! | GTTTTTGGTAGCAACCTTAT+GGG | - | chr1.2:58072916-58072935 | None:intergenic | 35.0% |
| !!! | TCGATGTGAGGGTTTTTTTT+GGG | + | chr1.2:58068722-58068741 | MS.gene066012:intron | 35.0% |
| !!! | TTCGATGTGAGGGTTTTTTT+TGG | + | chr1.2:58068721-58068740 | MS.gene066012:intron | 35.0% |
| AATGCCATCATTGTGCTAGA+AGG | + | chr1.2:58073261-58073280 | MS.gene066012:CDS | 40.0% | |
| AATTCAGAGGGAGAATCCAT+TGG | + | chr1.2:58073236-58073255 | MS.gene066012:CDS | 40.0% | |
| AATTGTCTGAGCGGTATTTG+GGG | + | chr1.2:58068070-58068089 | MS.gene066012:CDS | 40.0% | |
| ACAATGATGGCATTCACCAA+TGG | - | chr1.2:58073255-58073274 | None:intergenic | 40.0% | |
| ACTACTTAAACCGTGGGTAT+TGG | - | chr1.2:58068559-58068578 | None:intergenic | 40.0% | |
| AGATCCTTCTAGCACAATGA+TGG | - | chr1.2:58073268-58073287 | None:intergenic | 40.0% | |
| AGCAGAAGCTACAATTCAGA+GGG | + | chr1.2:58073224-58073243 | MS.gene066012:CDS | 40.0% | |
| AGTTGCTTCAGCAATCTATC+AGG | - | chr1.2:58071522-58071541 | None:intergenic | 40.0% | |
| ATTGCCATATGATGGTTCTC+AGG | + | chr1.2:58070040-58070059 | MS.gene066012:intron | 40.0% | |
| CTACTTAAACCGTGGGTATT+GGG | - | chr1.2:58068558-58068577 | None:intergenic | 40.0% | |
| CTCCGTGACTGAATATTCAA+TGG | - | chr1.2:58068831-58068850 | None:intergenic | 40.0% | |
| CTGACTATTCCAAATCAAGC+AGG | - | chr1.2:58070909-58070928 | None:intergenic | 40.0% | |
| GAATTGTCTGAGCGGTATTT+GGG | + | chr1.2:58068069-58068088 | MS.gene066012:CDS | 40.0% | |
| GTCTGATGAATGCAAAGGTA+AGG | + | chr1.2:58073060-58073079 | MS.gene066012:intron | 40.0% | |
| GTGAGAGAATAGCCAATGAA+AGG | + | chr1.2:58071342-58071361 | MS.gene066012:CDS | 40.0% | |
| GTGTCACAGTAAAAAGCCAT+TGG | + | chr1.2:58071489-58071508 | MS.gene066012:intron | 40.0% | |
| TAAATGCACCCCTAGAACTA+TGG | + | chr1.2:58072095-58072114 | MS.gene066012:intron | 40.0% | |
| TAGCAGAAGCTACAATTCAG+AGG | + | chr1.2:58073223-58073242 | MS.gene066012:CDS | 40.0% | |
| TCCTTGTGACTAACAGAACA+GGG | + | chr1.2:58070571-58070590 | MS.gene066012:intron | 40.0% | |
| TGAATATTCAGTCACGGAGA+CGG | + | chr1.2:58068832-58068851 | MS.gene066012:intron | 40.0% | |
| TGAGACAGAGATATCACAAG+GGG | - | chr1.2:58072058-58072077 | None:intergenic | 40.0% | |
| TGCTTGAAAGGTCTTCTGTT+TGG | + | chr1.2:58068364-58068383 | MS.gene066012:intron | 40.0% | |
| TGGATTGAGATGATGTGGAT+GGG | + | chr1.2:58070243-58070262 | MS.gene066012:intron | 40.0% | |
| TGTATATCACATGCCTTGTC+TGG | + | chr1.2:58069745-58069764 | MS.gene066012:intron | 40.0% | |
| TGTCATGCTTGGGATGATAA+TGG | + | chr1.2:58069143-58069162 | MS.gene066012:intron | 40.0% | |
| TTAATGGTTGCGGTTACGTT+GGG | + | chr1.2:58068586-58068605 | MS.gene066012:intron | 40.0% | |
| TTCAGCAATCTATCAGGAGT+AGG | - | chr1.2:58071516-58071535 | None:intergenic | 40.0% | |
| ! | AATCGGCCAATTTTCTTTGG+CGG | - | chr1.2:58070319-58070338 | None:intergenic | 40.0% |
| ! | ACACATGGATTGAGATGATG+TGG | + | chr1.2:58070238-58070257 | MS.gene066012:intron | 40.0% |
| ! | ACTAGTTCTTGGAAGGATGT+TGG | + | chr1.2:58071878-58071897 | MS.gene066012:CDS | 40.0% |
| ! | ACTTCTTCCTGTGGATGTTT+TGG | - | chr1.2:58071260-58071279 | None:intergenic | 40.0% |
| ! | ATGGATTGAGATGATGTGGA+TGG | + | chr1.2:58070242-58070261 | MS.gene066012:intron | 40.0% |
| ! | ATGGCTTTTTACTGTGACAC+AGG | - | chr1.2:58071489-58071508 | None:intergenic | 40.0% |
| ! | CAAGTGTTTCGTTTTCACCA+TGG | + | chr1.2:58071988-58072007 | MS.gene066012:intron | 40.0% |
| ! | CAATATTCGTGAAGGGTACA+TGG | + | chr1.2:58067836-58067855 | MS.gene066012:CDS | 40.0% |
| ! | CTTCTTCCTGTGGATGTTTT+GGG | - | chr1.2:58071259-58071278 | None:intergenic | 40.0% |
| ! | CTTTTCGTATGAACGAGATC+AGG | + | chr1.2:58070855-58070874 | MS.gene066012:intron | 40.0% |
| ! | CTTTTGACCAGCTTAGCATT+AGG | - | chr1.2:58069553-58069572 | None:intergenic | 40.0% |
| ! | GCCGTAGTTTTCTTACAATC+AGG | - | chr1.2:58068963-58068982 | None:intergenic | 40.0% |
| ! | GGTTTCGATTTTCAAAGCGT+TGG | - | chr1.2:58072524-58072543 | None:intergenic | 40.0% |
| ! | GTTTATGCATTTGCTGATGC+TGG | + | chr1.2:58068111-58068130 | MS.gene066012:CDS | 40.0% |
| ! | TGGCTTTTTACTGTGACACA+GGG | - | chr1.2:58071488-58071507 | None:intergenic | 40.0% |
| !! | AGAGTTGGTGTCATAGAATG+TGG | + | chr1.2:58068283-58068302 | MS.gene066012:intron | 40.0% |
| !! | AGTATGTCAATGGAGGTGTT+TGG | + | chr1.2:58070102-58070121 | MS.gene066012:intron | 40.0% |
| !! | ATTAGAAGCTGAGAAGTGCT+TGG | + | chr1.2:58071313-58071332 | MS.gene066012:CDS | 40.0% |
| !! | CACGCTCTTTTTCATTCACA+TGG | + | chr1.2:58070700-58070719 | MS.gene066012:intron | 40.0% |
| AAGAGAAATCGCTCTTCCGA+GGG | + | chr1.2:58071055-58071074 | MS.gene066012:intron | 45.0% | |
| AATTCCACGTACTCTTCCAC+CGG | - | chr1.2:58068054-58068073 | None:intergenic | 45.0% | |
| ACAACCCCTACAATCAAGCA+TGG | + | chr1.2:58072156-58072175 | MS.gene066012:intron | 45.0% | |
| AGAAGACCTTTCAAGCACAC+CGG | - | chr1.2:58068361-58068380 | None:intergenic | 45.0% | |
| AGGTCTACAACTGCAACATC+AGG | - | chr1.2:58068668-58068687 | None:intergenic | 45.0% | |
| AGTACGTGGAATTGTCTGAG+CGG | + | chr1.2:58068061-58068080 | MS.gene066012:CDS | 45.0% | |
| AGTGCTCATAGTGCAACACA+TGG | + | chr1.2:58070223-58070242 | MS.gene066012:intron | 45.0% | |
| AGTGCTTGCGTTAATGGTTG+CGG | + | chr1.2:58068576-58068595 | MS.gene066012:intron | 45.0% | |
| ATCAAACCGGTGTGCTTGAA+AGG | + | chr1.2:58068352-58068371 | MS.gene066012:intron | 45.0% | |
| CGGCAACAAATCTCTTCAAG+AGG | + | chr1.2:58071775-58071794 | MS.gene066012:CDS | 45.0% | |
| CTAACTCCCAAAACATCCAC+AGG | + | chr1.2:58071250-58071269 | MS.gene066012:intron | 45.0% | |
| GAATGACACTGCATTGGAGA+TGG | + | chr1.2:58068922-58068941 | MS.gene066012:CDS | 45.0% | |
| GAGAATAGCCAATGAAAGGG+TGG | + | chr1.2:58071346-58071365 | MS.gene066012:CDS | 45.0% | |
| GCAAATGCATAAACAGACCC+AGG | - | chr1.2:58068105-58068124 | None:intergenic | 45.0% | |
| GCAAGCACTACTTAAACCGT+GGG | - | chr1.2:58068565-58068584 | None:intergenic | 45.0% | |
| GGAATTGTCTGAGCGGTATT+TGG | + | chr1.2:58068068-58068087 | MS.gene066012:CDS | 45.0% | |
| GGTCCTTGTGACTAACAGAA+CGG | + | chr1.2:58070356-58070375 | MS.gene066012:intron | 45.0% | |
| GTCACTCAGGTTCCAACAAT+TGG | + | chr1.2:58073348-58073367 | MS.gene066012:CDS | 45.0% | |
| GTCCTTGTGACTAACAGAAC+AGG | + | chr1.2:58070357-58070376 | MS.gene066012:intron | 45.0% | |
| GTCCTTGTGACTAACAGAAC+GGG | + | chr1.2:58070357-58070376 | MS.gene066012:intron | 45.0% | |
| GTTAATGGTTGCGGTTACGT+TGG | + | chr1.2:58068585-58068604 | MS.gene066012:intron | 45.0% | |
| GTTACGTTGGGGGTCAAATA+TGG | + | chr1.2:58068598-58068617 | MS.gene066012:intron | 45.0% | |
| TAATGGTTGCGGTTACGTTG+GGG | + | chr1.2:58068587-58068606 | MS.gene066012:intron | 45.0% | |
| TATGGTTTACCGGCATAGCA+TGG | + | chr1.2:58071457-58071476 | MS.gene066012:intron | 45.0% | |
| TCACTTGAACCCAATACCCA+CGG | + | chr1.2:58068546-58068565 | MS.gene066012:intron | 45.0% | |
| TCCACCTGAGAACCATCATA+TGG | - | chr1.2:58070047-58070066 | None:intergenic | 45.0% | |
| TCCTTGTGACTAACAGAACG+GGG | + | chr1.2:58070358-58070377 | MS.gene066012:intron | 45.0% | |
| TCTATCAGGAGTAGGACCAA+TGG | - | chr1.2:58071508-58071527 | None:intergenic | 45.0% | |
| TGCTTGGAGATGTCATGCTT+GGG | + | chr1.2:58069133-58069152 | MS.gene066012:intron | 45.0% | |
| TGTGAATGTTGCAGTTGTCG+TGG | + | chr1.2:58068883-58068902 | MS.gene066012:intron | 45.0% | |
| TGTTCTCAGCTAAGAGCTCA+TGG | + | chr1.2:58073172-58073191 | MS.gene066012:intron | 45.0% | |
| TTGCTTGGAGATGTCATGCT+TGG | + | chr1.2:58069132-58069151 | MS.gene066012:intron | 45.0% | |
| TTGTCGTGGACGTTTGAGAA+GGG | + | chr1.2:58068897-58068916 | MS.gene066012:CDS | 45.0% | |
| ! | ATGCTGGTGATGCTCATAAG+AGG | + | chr1.2:58068127-58068146 | MS.gene066012:CDS | 45.0% |
| ! | ATTTGGGGTTTCGACAACCT+GGG | + | chr1.2:58068085-58068104 | MS.gene066012:CDS | 45.0% |
| ! | TATTTGGGGTTTCGACAACC+TGG | + | chr1.2:58068084-58068103 | MS.gene066012:CDS | 45.0% |
| ! | TCTACTAAGTGGCTTGTGAG+CGG | + | chr1.2:58069699-58069718 | MS.gene066012:intron | 45.0% |
| ! | TGCTGGTGATGCTCATAAGA+GGG | + | chr1.2:58068128-58068147 | MS.gene066012:CDS | 45.0% |
| !! | CATGTGAGTCTAGTTCTCCT+TGG | - | chr1.2:58071923-58071942 | None:intergenic | 45.0% |
| !!! | AAAAAAAAATATGTTTTAAT+TGG | + | chr1.2:58068428-58068447 | MS.gene066012:intron | 5.0% |
| !!! | AAATTTTTATTATAATTTGA+TGG | + | chr1.2:58073131-58073150 | MS.gene066012:intron | 5.0% |
| !!! | AATTTTAATTTCAAATTTAA+AGG | - | chr1.2:58069626-58069645 | None:intergenic | 5.0% |
| !!! | TAAATATTTATATTTTCAAA+AGG | - | chr1.2:58072452-58072471 | None:intergenic | 5.0% |
| AAGGCTCCACACTTGTCACA+AGG | - | chr1.2:58070431-58070450 | None:intergenic | 50.0% | |
| AATGGTTGCGGTTACGTTGG+GGG | + | chr1.2:58068588-58068607 | MS.gene066012:intron | 50.0% | |
| ACTTACGCAACGACAGGGTT+TGG | + | chr1.2:58073301-58073320 | MS.gene066012:CDS | 50.0% | |
| AGGGAGGAATGACACTGCAT+TGG | + | chr1.2:58068916-58068935 | MS.gene066012:CDS | 50.0% | |
| AGGGTGTAACCATGCTATGC+CGG | - | chr1.2:58071469-58071488 | None:intergenic | 50.0% | |
| AGTACCGTTGCAGTTCCAAG+CGG | - | chr1.2:58067902-58067921 | None:intergenic | 50.0% | |
| CAACGTGTCAGTGTCAGTGT+TGG | - | chr1.2:58068187-58068206 | None:intergenic | 50.0% | |
| CAAGTAAGCGTTCTCGTCCA+AGG | + | chr1.2:58071903-58071922 | MS.gene066012:intron | 50.0% | |
| CATGGTCCTTGTGACAAGTG+TGG | + | chr1.2:58070422-58070441 | MS.gene066012:intron | 50.0% | |
| CCAGTGCCGCCAAAGAAAAT+TGG | + | chr1.2:58070453-58070472 | MS.gene066012:intron | 50.0% | |
| CGCAAGCACTACTTAAACCG+TGG | - | chr1.2:58068566-58068585 | None:intergenic | 50.0% | |
| CTGTCTCTGTGACTGCGATT+GGG | - | chr1.2:58068638-58068657 | None:intergenic | 50.0% | |
| CTTACGCAACGACAGGGTTT+GGG | + | chr1.2:58073302-58073321 | MS.gene066012:CDS | 50.0% | |
| GAAGAGAAATCGCTCTTCCG+AGG | + | chr1.2:58071054-58071073 | MS.gene066012:intron | 50.0% | |
| GAGATATCACAAGGGGCTTG+TGG | - | chr1.2:58072051-58072070 | None:intergenic | 50.0% | |
| GCAGTGCCGCCAAAGAAAAT+TGG | + | chr1.2:58070310-58070329 | MS.gene066012:intron | 50.0% | |
| GCCATATGATGGTTCTCAGG+TGG | + | chr1.2:58070043-58070062 | MS.gene066012:intron | 50.0% | |
| GCCCTGTTCTGTTAGTCACA+AGG | - | chr1.2:58070575-58070594 | None:intergenic | 50.0% | |
| GCTATGCCGGTAAACCATAC+AGG | - | chr1.2:58071456-58071475 | None:intergenic | 50.0% | |
| GTTGGTTGGAGTGGAAGGAA+AGG | + | chr1.2:58073200-58073219 | MS.gene066012:CDS | 50.0% | |
| GTTGTCGTGGACGTTTGAGA+AGG | + | chr1.2:58068896-58068915 | MS.gene066012:intron | 50.0% | |
| TAAGAGCTCATGGCCAGAGT+TGG | + | chr1.2:58073182-58073201 | MS.gene066012:CDS | 50.0% | |
| TGTCTCTGTGACTGCGATTG+GGG | - | chr1.2:58068637-58068656 | None:intergenic | 50.0% | |
| TTCAACCTCTCCATCACCGA+CGG | + | chr1.2:58067871-58067890 | MS.gene066012:CDS | 50.0% | |
| TTCACCGCTTGGAACTGCAA+CGG | + | chr1.2:58067895-58067914 | MS.gene066012:CDS | 50.0% | |
| ! | AGGTGTTCGTGCAGCCATTT+TGG | - | chr1.2:58072714-58072733 | None:intergenic | 50.0% |
| ! | CAACGACAGGGTTTGGGTTT+GGG | + | chr1.2:58073308-58073327 | MS.gene066012:CDS | 50.0% |
| ! | CCAATTTTCTTTGGCGGCAC+TGG | - | chr1.2:58070313-58070332 | None:intergenic | 50.0% |
| ! | CTACTAAGTGGCTTGTGAGC+GGG | + | chr1.2:58069700-58069719 | MS.gene066012:intron | 50.0% |
| ACTTTCCTGAGCCCAGCACT+TGG | - | chr1.2:58070275-58070294 | None:intergenic | 55.0% | |
| CCTGTCGTTGCGTAAGTCGT+CGG | - | chr1.2:58073298-58073317 | None:intergenic | 55.0% | |
| CCTTCCACTCCAACCAACTC+TGG | - | chr1.2:58073198-58073217 | None:intergenic | 55.0% | |
| CGACGACTTACGCAACGACA+GGG | + | chr1.2:58073296-58073315 | MS.gene066012:CDS | 55.0% | |
| CTTTGGCGGCACTGCAGATT+GGG | - | chr1.2:58070305-58070324 | None:intergenic | 55.0% | |
| GCCCCGTTCTGTTAGTCACA+AGG | - | chr1.2:58070362-58070381 | None:intergenic | 55.0% | |
| GCTGTCTCTGTGACTGCGAT+TGG | - | chr1.2:58068639-58068658 | None:intergenic | 55.0% | |
| GGAGACGGTCCTTTCACTAC+TGG | + | chr1.2:58068847-58068866 | MS.gene066012:intron | 55.0% | |
| GTTCCAAGCGGTGAAACCGT+CGG | - | chr1.2:58067890-58067909 | None:intergenic | 55.0% | |
| TCGTGGACGTTTGAGAAGGG+AGG | + | chr1.2:58068900-58068919 | MS.gene066012:CDS | 55.0% | |
| TCTTTGGCGGCACTGCAGAT+TGG | - | chr1.2:58070306-58070325 | None:intergenic | 55.0% | |
| ! | AGCTCATGGCCAGAGTTGGT+TGG | + | chr1.2:58073186-58073205 | MS.gene066012:CDS | 55.0% |
| ! | ATGGCCAGAGTTGGTTGGAG+TGG | + | chr1.2:58073191-58073210 | MS.gene066012:CDS | 55.0% |
| ! | CCAGAGTTGGTTGGAGTGGA+AGG | + | chr1.2:58073195-58073214 | MS.gene066012:CDS | 55.0% |
| ! | GCAACGACAGGGTTTGGGTT+TGG | + | chr1.2:58073307-58073326 | MS.gene066012:CDS | 55.0% |
| ! | TAAGTGGCTTGTGAGCGGGT+AGG | + | chr1.2:58069704-58069723 | MS.gene066012:intron | 55.0% |
| !! | TGAAACCGTCGGTGATGGAG+AGG | - | chr1.2:58067879-58067898 | None:intergenic | 55.0% |
| !! | TTCTTTGGCGGCACTGGCAA+AGG | - | chr1.2:58070450-58070469 | None:intergenic | 55.0% |
| AGCGGTGAAACCGTCGGTGA+TGG | - | chr1.2:58067884-58067903 | None:intergenic | 60.0% | |
| ATGGGCCCATGCCAAGTGCT+GGG | + | chr1.2:58070261-58070280 | MS.gene066012:intron | 60.0% | |
| CCGACGACTTACGCAACGAC+AGG | + | chr1.2:58073295-58073314 | MS.gene066012:CDS | 60.0% | |
| CTGAGCCCAGCACTTGGCAT+GGG | - | chr1.2:58070269-58070288 | None:intergenic | 60.0% | |
| TCACCGACGGTTTCACCGCT+TGG | + | chr1.2:58067884-58067903 | MS.gene066012:CDS | 60.0% | |
| ! | GAAGCAGCGTGCTGCTCAGT+GGG | + | chr1.2:58068023-58068042 | MS.gene066012:CDS | 60.0% |
| ! | TGAAGCAGCGTGCTGCTCAG+TGG | + | chr1.2:58068022-58068041 | MS.gene066012:CDS | 60.0% |
| CCACGTACTCTTCCACCGGC+TGG | - | chr1.2:58068050-58068069 | None:intergenic | 65.0% | |
| CCTGAGCCCAGCACTTGGCA+TGG | - | chr1.2:58070270-58070289 | None:intergenic | 65.0% | |
| CTGGGCTCAGGAAAGTCCCC+GGG | + | chr1.2:58070279-58070298 | MS.gene066012:intron | 65.0% | |
| GATGGGCCCATGCCAAGTGC+TGG | + | chr1.2:58070260-58070279 | MS.gene066012:intron | 65.0% | |
| GCTGGGCTCAGGAAAGTCCC+CGG | + | chr1.2:58070278-58070297 | MS.gene066012:intron | 65.0% | |
| TGCTGCTCAGTGGGACCAGC+CGG | + | chr1.2:58068032-58068051 | MS.gene066012:CDS | 65.0% | |
| ! | CCAGCCGGTGGAAGAGTACG+TGG | + | chr1.2:58068047-58068066 | MS.gene066012:CDS | 65.0% |
| !! | CCATGCCAAGTGCTGGGCTC+AGG | + | chr1.2:58070267-58070286 | MS.gene066012:intron | 65.0% |
| CGGCACTGCAGATTGGGCCC+GGG | - | chr1.2:58070299-58070318 | None:intergenic | 70.0% | |
| GCGGCACTGCAGATTGGGCC+CGG | - | chr1.2:58070300-58070319 | None:intergenic | 70.0% | |
| GGCACTGCAGATTGGGCCCG+GGG | - | chr1.2:58070298-58070317 | None:intergenic | 70.0% | |
| TGCTCAGTGGGACCAGCCGG+TGG | + | chr1.2:58068035-58068054 | MS.gene066012:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 58067781 | 58073374 | 58067781 | ID=MS.gene066012 |
| chr1.2 | mRNA | 58067781 | 58073374 | 58067781 | ID=MS.gene066012.t1;Parent=MS.gene066012 |
| chr1.2 | exon | 58067781 | 58067916 | 58067781 | ID=MS.gene066012.t1.exon1;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58067781 | 58067916 | 58067781 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| chr1.2 | exon | 58068007 | 58068149 | 58068007 | ID=MS.gene066012.t1.exon2;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58068007 | 58068149 | 58068007 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| chr1.2 | exon | 58068897 | 58069025 | 58068897 | ID=MS.gene066012.t1.exon3;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58068897 | 58069025 | 58068897 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| chr1.2 | exon | 58071272 | 58071394 | 58071272 | ID=MS.gene066012.t1.exon4;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58071272 | 58071394 | 58071272 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| chr1.2 | exon | 58071704 | 58071905 | 58071704 | ID=MS.gene066012.t1.exon5;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58071704 | 58071905 | 58071704 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| chr1.2 | exon | 58073181 | 58073374 | 58073181 | ID=MS.gene066012.t1.exon6;Parent=MS.gene066012.t1 |
| chr1.2 | CDS | 58073181 | 58073374 | 58073181 | ID=cds.MS.gene066012.t1;Parent=MS.gene066012.t1 |
| Gene Sequence |
| Protein sequence |
