Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45533.t1 | AES67650.2 | 90.8 | 229 | 11 | 3 | 9 | 237 | 54 | 272 | 2.00E-104 | 388.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45533.t1 | Q5WHG0 | 51.9 | 77 | 32 | 1 | 37 | 108 | 7 | 83 | 4.1e-13 | 76.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45533.t1 | G7IRX6 | 90.8 | 229 | 11 | 3 | 9 | 237 | 54 | 272 | 1.4e-104 | 388.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene45533 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene45533 | 0.824286 | 8.76E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene45533 | 0.82503 | 5.85E-54 | -1.69E-46 |
| MS.gene049170 | MS.gene45533 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene049230 | MS.gene45533 | 0.874062 | 9.06E-68 | -1.69E-46 |
| MS.gene049297 | MS.gene45533 | 0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene45533 | 0.810884 | 9.23E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene45533 | 0.807867 | 4.10E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene45533 | 0.91303 | 9.87E-84 | -1.69E-46 |
| MS.gene049443 | MS.gene45533 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene049599 | MS.gene45533 | -0.802034 | 6.80E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene45533 | 0.882016 | 1.48E-70 | -1.69E-46 |
| MS.gene04984 | MS.gene45533 | 0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene45533 | 0.874098 | 8.80E-68 | -1.69E-46 |
| MS.gene049915 | MS.gene45533 | 0.842521 | 2.46E-58 | -1.69E-46 |
| MS.gene04991 | MS.gene45533 | -0.827498 | 1.51E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene45533 | 0.868895 | 4.65E-66 | -1.69E-46 |
| MS.gene050227 | MS.gene45533 | 0.879837 | 8.99E-70 | -1.69E-46 |
| MS.gene050228 | MS.gene45533 | 0.875188 | 3.75E-68 | -1.69E-46 |
| MS.gene050301 | MS.gene45533 | 0.81807 | 2.37E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene45533 | -0.841507 | 4.56E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene45533 | 0.812675 | 3.76E-51 | -1.69E-46 |
| MS.gene050398 | MS.gene45533 | 0.816202 | 6.25E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene45533 | 0.808545 | 2.94E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene45533 | -0.845603 | 3.66E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene45533 | 0.814134 | 1.80E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene45533 | 0.82653 | 2.58E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene45533 | -0.909049 | 8.75E-82 | -1.69E-46 |
| MS.gene050642 | MS.gene45533 | 0.907606 | 4.23E-81 | -1.69E-46 |
| MS.gene050762 | MS.gene45533 | 0.830701 | 2.53E-55 | -1.69E-46 |
| MS.gene050763 | MS.gene45533 | 0.833804 | 4.32E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene45533 | 0.826756 | 2.28E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene45533 | 0.805919 | 1.06E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene45533 | 0.81509 | 1.10E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene45533 | -0.830054 | 3.65E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene45533 | 0.831352 | 1.75E-55 | -1.69E-46 |
| MS.gene051663 | MS.gene45533 | 0.814338 | 1.62E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene45533 | 0.848191 | 7.17E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene45533 | 0.910528 | 1.69E-82 | -1.69E-46 |
| MS.gene052011 | MS.gene45533 | -0.824688 | 7.05E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene45533 | 0.95927 | 2.94E-117 | -1.69E-46 |
| MS.gene052176 | MS.gene45533 | 0.890836 | 6.87E-74 | -1.69E-46 |
| MS.gene052178 | MS.gene45533 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene45533 | 0.844597 | 6.85E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene45533 | 0.828548 | 8.45E-55 | -1.69E-46 |
| MS.gene052255 | MS.gene45533 | 0.811105 | 8.27E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene45533 | 0.81771 | 2.86E-52 | -1.69E-46 |
| MS.gene052309 | MS.gene45533 | -0.85966 | 3.55E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene45533 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene45533 | 0.862674 | 4.29E-64 | -1.69E-46 |
| MS.gene052376 | MS.gene45533 | 0.831005 | 2.13E-55 | -1.69E-46 |
| MS.gene052389 | MS.gene45533 | 0.880707 | 4.40E-70 | -1.69E-46 |
| MS.gene052420 | MS.gene45533 | 0.842316 | 2.79E-58 | -1.69E-46 |
| MS.gene052426 | MS.gene45533 | 0.804779 | 1.83E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene45533 | 0.815516 | 8.88E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene45533 | 0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene053073 | MS.gene45533 | 0.804722 | 1.88E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene45533 | 0.814286 | 1.66E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene45533 | 0.850221 | 1.95E-60 | -1.69E-46 |
| MS.gene053557 | MS.gene45533 | 0.836787 | 7.63E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene45533 | 0.891689 | 3.16E-74 | -1.69E-46 |
| MS.gene053928 | MS.gene45533 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene054098 | MS.gene45533 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene45533 | 0.811079 | 8.38E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene45533 | 0.872476 | 3.09E-67 | -1.69E-46 |
| MS.gene054379 | MS.gene45533 | 0.845404 | 4.15E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene45533 | 0.841762 | 3.90E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene45533 | 0.918776 | 1.03E-86 | -1.69E-46 |
| MS.gene054942 | MS.gene45533 | 0.822868 | 1.88E-53 | -1.69E-46 |
| MS.gene054983 | MS.gene45533 | 0.854353 | 1.30E-61 | -1.69E-46 |
| MS.gene05510 | MS.gene45533 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene45533 | 0.814369 | 1.60E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene45533 | 0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene45533 | 0.830557 | 2.75E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene45533 | 0.817932 | 2.55E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene45533 | 0.872275 | 3.60E-67 | -1.69E-46 |
| MS.gene055604 | MS.gene45533 | 0.805573 | 1.25E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene45533 | 0.855391 | 6.51E-62 | -1.69E-46 |
| MS.gene055859 | MS.gene45533 | 0.834279 | 3.29E-56 | -1.69E-46 |
| MS.gene055946 | MS.gene45533 | 0.813627 | 2.33E-51 | -1.69E-46 |
| MS.gene056087 | MS.gene45533 | 0.81212 | 4.97E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene45533 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene056447 | MS.gene45533 | 0.815479 | 9.05E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene45533 | 0.807425 | 5.09E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene45533 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene45533 | 0.831433 | 1.67E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene45533 | 0.833197 | 6.13E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene45533 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene45533 | 0.899773 | 1.42E-77 | -1.69E-46 |
| MS.gene05702 | MS.gene45533 | 0.839832 | 1.25E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene45533 | 0.803579 | 3.26E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene45533 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene45533 | 0.847357 | 1.22E-59 | -1.69E-46 |
| MS.gene057750 | MS.gene45533 | 0.817444 | 3.29E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene45533 | 0.832259 | 1.05E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene45533 | 0.842909 | 1.94E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene45533 | 0.830022 | 3.71E-55 | -1.69E-46 |
| MS.gene058139 | MS.gene45533 | 0.844944 | 5.52E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene45533 | 0.863827 | 1.88E-64 | -1.69E-46 |
| MS.gene058146 | MS.gene45533 | 0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene45533 | 0.807477 | 4.96E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene45533 | 0.811249 | 7.70E-51 | -1.69E-46 |
| MS.gene058371 | MS.gene45533 | 0.813874 | 2.05E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene45533 | 0.820938 | 5.26E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene45533 | 0.844554 | 7.04E-59 | -1.69E-46 |
| MS.gene058710 | MS.gene45533 | 0.887547 | 1.30E-72 | -1.69E-46 |
| MS.gene058749 | MS.gene45533 | 0.854778 | 9.81E-62 | -1.69E-46 |
| MS.gene058845 | MS.gene45533 | 0.83868 | 2.49E-57 | -1.69E-46 |
| MS.gene059033 | MS.gene45533 | -0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene45533 | 0.837906 | 3.94E-57 | -1.69E-46 |
| MS.gene059247 | MS.gene45533 | 0.832768 | 7.83E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene45533 | 0.880776 | 4.15E-70 | -1.69E-46 |
| MS.gene059420 | MS.gene45533 | 0.811193 | 7.91E-51 | -1.69E-46 |
| MS.gene059511 | MS.gene45533 | 0.859713 | 3.42E-63 | -1.69E-46 |
| MS.gene059518 | MS.gene45533 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene45533 | 0.829459 | 5.09E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene45533 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene059692 | MS.gene45533 | 0.810138 | 1.34E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene45533 | 0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene45533 | 0.877787 | 4.75E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene45533 | 0.857024 | 2.16E-62 | -1.69E-46 |
| MS.gene059899 | MS.gene45533 | 0.844055 | 9.58E-59 | -1.69E-46 |
| MS.gene060084 | MS.gene45533 | 0.856278 | 3.58E-62 | -1.69E-46 |
| MS.gene060297 | MS.gene45533 | 0.856077 | 4.11E-62 | -1.69E-46 |
| MS.gene060476 | MS.gene45533 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene45533 | 0.826673 | 2.38E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene45533 | 0.831978 | 1.23E-55 | -1.69E-46 |
| MS.gene060685 | MS.gene45533 | 0.823112 | 1.65E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene45533 | 0.854825 | 9.51E-62 | -1.69E-46 |
| MS.gene060942 | MS.gene45533 | 0.828017 | 1.14E-54 | -1.69E-46 |
| MS.gene060943 | MS.gene45533 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene45533 | 0.818405 | 1.99E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene45533 | 0.844924 | 5.59E-59 | -1.69E-46 |
| MS.gene061040 | MS.gene45533 | -0.813691 | 2.25E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene45533 | 0.883194 | 5.51E-71 | -1.69E-46 |
| MS.gene061114 | MS.gene45533 | -0.809633 | 1.72E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene45533 | 0.805334 | 1.40E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45533.t1 | MTR_2g097690 | 90.830 | 229 | 11 | 3 | 9 | 237 | 54 | 272 | 2.84e-147 | 412 |
| MS.gene45533.t1 | MTR_2g097690 | 89.147 | 129 | 9 | 2 | 9 | 137 | 54 | 177 | 2.73e-78 | 234 |
| MS.gene45533.t1 | MTR_7g085600 | 47.126 | 87 | 45 | 1 | 33 | 118 | 52 | 138 | 2.05e-15 | 74.3 |
| MS.gene45533.t1 | MTR_7g069480 | 54.098 | 61 | 28 | 0 | 36 | 96 | 28 | 88 | 1.50e-13 | 69.7 |
| MS.gene45533.t1 | MTR_1g110310 | 55.556 | 63 | 27 | 1 | 36 | 97 | 17 | 79 | 3.08e-13 | 68.6 |
| MS.gene45533.t1 | MTR_3g087030 | 50.000 | 72 | 34 | 1 | 25 | 96 | 74 | 143 | 8.72e-13 | 67.4 |
| MS.gene45533.t1 | MTR_2g436560 | 45.070 | 71 | 38 | 1 | 27 | 96 | 95 | 165 | 1.37e-12 | 66.6 |
| MS.gene45533.t1 | MTR_5g035770 | 44.944 | 89 | 43 | 3 | 36 | 123 | 26 | 109 | 1.83e-12 | 66.2 |
| MS.gene45533.t1 | MTR_2g436580 | 36.957 | 92 | 57 | 1 | 6 | 96 | 80 | 171 | 6.24e-12 | 63.5 |
| MS.gene45533.t1 | MTR_2g104030 | 51.667 | 60 | 29 | 0 | 37 | 96 | 72 | 131 | 1.07e-11 | 64.3 |
| MS.gene45533.t1 | MTR_3g073560 | 34.711 | 121 | 53 | 4 | 1 | 111 | 388 | 492 | 1.46e-11 | 63.9 |
| MS.gene45533.t1 | MTR_4g094275 | 40.506 | 79 | 42 | 2 | 25 | 98 | 41 | 119 | 1.84e-11 | 61.2 |
| MS.gene45533.t1 | MTR_4g032805 | 50.000 | 64 | 30 | 1 | 35 | 96 | 128 | 191 | 2.32e-11 | 62.4 |
| MS.gene45533.t1 | MTR_3g061170 | 44.186 | 86 | 37 | 2 | 22 | 96 | 38 | 123 | 2.93e-11 | 60.5 |
| MS.gene45533.t1 | MTR_5g065160 | 46.575 | 73 | 32 | 2 | 37 | 102 | 84 | 156 | 4.85e-11 | 62.4 |
| MS.gene45533.t1 | MTR_5g065160 | 46.575 | 73 | 32 | 2 | 37 | 102 | 85 | 157 | 4.90e-11 | 62.4 |
| MS.gene45533.t1 | MTR_5g065160 | 46.575 | 73 | 32 | 2 | 37 | 102 | 78 | 150 | 5.33e-11 | 62.0 |
| MS.gene45533.t1 | MTR_5g065160 | 46.575 | 73 | 32 | 2 | 37 | 102 | 85 | 157 | 5.79e-11 | 62.0 |
| MS.gene45533.t1 | MTR_1g105540 | 41.333 | 75 | 39 | 1 | 37 | 106 | 37 | 111 | 5.81e-11 | 61.6 |
| MS.gene45533.t1 | MTR_8g081620 | 43.077 | 65 | 34 | 1 | 37 | 98 | 62 | 126 | 6.35e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45533.t1 | AT5G59610 | 68.326 | 221 | 62 | 5 | 21 | 237 | 62 | 278 | 1.98e-96 | 283 |
| MS.gene45533.t1 | AT5G59610 | 68.326 | 221 | 62 | 5 | 21 | 237 | 62 | 278 | 1.98e-96 | 283 |
| MS.gene45533.t1 | AT5G59610 | 64.706 | 221 | 59 | 6 | 21 | 237 | 62 | 267 | 9.70e-86 | 256 |
| MS.gene45533.t1 | AT5G59610 | 64.706 | 221 | 59 | 6 | 21 | 237 | 62 | 267 | 9.70e-86 | 256 |
| MS.gene45533.t1 | AT5G59610 | 50.562 | 178 | 82 | 4 | 21 | 196 | 62 | 235 | 3.12e-46 | 154 |
| MS.gene45533.t1 | AT5G18140 | 34.146 | 123 | 67 | 3 | 8 | 117 | 42 | 163 | 6.71e-14 | 70.1 |
| MS.gene45533.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 20 | 96 | 59 | 136 | 4.61e-13 | 68.2 |
| MS.gene45533.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 20 | 96 | 59 | 136 | 4.77e-13 | 68.2 |
| MS.gene45533.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 20 | 96 | 59 | 136 | 4.77e-13 | 68.2 |
| MS.gene45533.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 20 | 96 | 59 | 136 | 4.77e-13 | 68.2 |
| MS.gene45533.t1 | AT5G05750 | 33.913 | 115 | 60 | 2 | 25 | 123 | 103 | 217 | 8.70e-13 | 66.6 |
| MS.gene45533.t1 | AT3G57340 | 40.541 | 74 | 44 | 0 | 23 | 96 | 101 | 174 | 1.07e-12 | 67.0 |
| MS.gene45533.t1 | AT3G57340 | 40.541 | 74 | 44 | 0 | 23 | 96 | 101 | 174 | 1.07e-12 | 67.0 |
| MS.gene45533.t1 | AT4G13830 | 40.449 | 89 | 46 | 3 | 37 | 118 | 68 | 156 | 1.20e-12 | 65.1 |
| MS.gene45533.t1 | AT3G08970 | 52.459 | 61 | 29 | 0 | 36 | 96 | 28 | 88 | 1.48e-12 | 67.0 |
| MS.gene45533.t1 | AT3G08970 | 52.459 | 61 | 29 | 0 | 36 | 96 | 28 | 88 | 1.48e-12 | 67.0 |
| MS.gene45533.t1 | AT3G17830 | 44.304 | 79 | 41 | 1 | 18 | 96 | 49 | 124 | 1.84e-12 | 66.6 |
| MS.gene45533.t1 | AT5G49060 | 48.333 | 60 | 31 | 0 | 37 | 96 | 101 | 160 | 2.05e-12 | 66.2 |
| MS.gene45533.t1 | AT5G49060 | 48.333 | 60 | 31 | 0 | 37 | 96 | 101 | 160 | 2.05e-12 | 66.2 |
| MS.gene45533.t1 | AT4G39960 | 53.333 | 60 | 28 | 0 | 37 | 96 | 87 | 146 | 4.75e-12 | 65.5 |
| MS.gene45533.t1 | AT4G39960 | 53.333 | 60 | 28 | 0 | 37 | 96 | 87 | 146 | 4.75e-12 | 65.5 |
| MS.gene45533.t1 | AT2G22360 | 53.333 | 60 | 28 | 0 | 37 | 96 | 88 | 147 | 5.04e-12 | 65.1 |
| MS.gene45533.t1 | AT4G13830 | 38.372 | 86 | 46 | 3 | 37 | 115 | 68 | 153 | 9.19e-12 | 61.6 |
| MS.gene45533.t1 | AT1G68370 | 51.471 | 68 | 30 | 2 | 36 | 102 | 18 | 83 | 1.44e-11 | 63.9 |
| MS.gene45533.t1 | AT1G59980 | 46.269 | 67 | 35 | 1 | 32 | 97 | 20 | 86 | 1.51e-11 | 63.9 |
| MS.gene45533.t1 | AT1G59980 | 46.269 | 67 | 35 | 1 | 32 | 97 | 20 | 86 | 1.75e-11 | 63.5 |
| MS.gene45533.t1 | AT4G13830 | 42.466 | 73 | 38 | 2 | 37 | 105 | 68 | 140 | 1.80e-11 | 61.6 |
| MS.gene45533.t1 | AT1G24120 | 41.573 | 89 | 46 | 3 | 36 | 123 | 21 | 104 | 2.39e-11 | 63.2 |
| MS.gene45533.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 37 | 96 | 50 | 110 | 2.70e-11 | 63.2 |
| MS.gene45533.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 37 | 96 | 50 | 110 | 2.93e-11 | 62.8 |
| MS.gene45533.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 37 | 96 | 50 | 110 | 2.99e-11 | 62.8 |
| MS.gene45533.t1 | AT3G13310 | 45.714 | 70 | 36 | 1 | 31 | 100 | 60 | 127 | 6.40e-11 | 59.3 |
Find 45 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTACAGGAGACTTCTTTA+AGG | 0.240029 | 2.1:-6411663 | MS.gene45533:intron |
| GTGGCTATAGAAATAGAATA+AGG | 0.258658 | 2.1:-6415275 | MS.gene45533:CDS |
| ATCTGTGAATGAAATCAAAA+AGG | 0.320337 | 2.1:-6415190 | MS.gene45533:CDS |
| GAGTCTCCATATGAAGTTCT+TGG | 0.367430 | 2.1:-6415228 | MS.gene45533:CDS |
| AGAGATGTTCAAATAACAAT+AGG | 0.374423 | 2.1:-6411882 | MS.gene45533:intron |
| CAACTTGTTGATTCCAACTC+TGG | 0.377760 | 2.1:+6413516 | None:intergenic |
| GACAAACCAAGAACTTCATA+TGG | 0.429946 | 2.1:+6415222 | None:intergenic |
| TCACCTTGAGTGCTGTTGCT+TGG | 0.430562 | 2.1:+6411136 | None:intergenic |
| ATTACCTCTTTATTAACATC+AGG | 0.432548 | 2.1:+6415138 | None:intergenic |
| TTCAAGAAGAGTTCAAGAAC+TGG | 0.433984 | 2.1:-6411637 | MS.gene45533:CDS |
| CTATATCTGATTCTGAAACT+AGG | 0.435657 | 2.1:+6415324 | None:intergenic |
| AAGGAAAGCCGAAGAGCCTA+TGG | 0.442336 | 2.1:-6411595 | MS.gene45533:CDS |
| TGGCTATAGAAATAGAATAA+GGG | 0.455128 | 2.1:-6415274 | MS.gene45533:CDS |
| GGAAATAGGCGAAGAATTTG+TGG | 0.458728 | 2.1:-6411245 | MS.gene45533:CDS |
| AACTCCTCCCATAGGCTCTT+CGG | 0.475580 | 2.1:+6411587 | None:intergenic |
| TGATTCAAATGAAAGTCCTC+AGG | 0.489157 | 2.1:-6411194 | MS.gene45533:CDS |
| CACTCAAGGTGAAGCTAGCA+AGG | 0.491535 | 2.1:-6411125 | MS.gene45533:CDS |
| GAGCCTATGGGAGGAGTTGT+CGG | 0.510611 | 2.1:-6411582 | MS.gene45533:intron |
| TCATCCTGATGTTAATAAAG+AGG | 0.514132 | 2.1:-6415142 | MS.gene45533:intron |
| GAGTGGCTTCTATTTCATCA+AGG | 0.517887 | 2.1:+6411080 | None:intergenic |
| TTCAGAATCATACTTTCTGC+GGG | 0.518411 | 2.1:+6413568 | None:intergenic |
| ATTTCATTCACAGATGCAGA+TGG | 0.530663 | 2.1:+6415198 | None:intergenic |
| CTTCTCAAAGAAGCCAGAGT+TGG | 0.533826 | 2.1:-6413529 | MS.gene45533:CDS |
| TTTCAGAATCATACTTTCTG+CGG | 0.543741 | 2.1:+6413567 | None:intergenic |
| ACACCAAGCAACAGCACTCA+AGG | 0.557671 | 2.1:-6411139 | MS.gene45533:CDS |
| CAGCATGAGAACAAAGGAAG+AGG | 0.565694 | 2.1:-6415297 | MS.gene45533:CDS |
| AAATAGAAGCCACTCTAGCT+CGG | 0.585461 | 2.1:-6411072 | MS.gene45533:CDS |
| GAAGCTAGTGCGGCTGCACA+AGG | 0.586139 | 2.1:-6411614 | MS.gene45533:CDS |
| TAAGGGTAGTTGTAAGAGCA+AGG | 0.586280 | 2.1:-6415257 | MS.gene45533:CDS |
| AGAAAGCAGCATGAGAACAA+AGG | 0.590712 | 2.1:-6415303 | MS.gene45533:CDS |
| CAAGAACTGGGAAGCTAGTG+CGG | 0.594019 | 2.1:-6411624 | MS.gene45533:CDS |
| TCAAGAAGAGTTCAAGAACT+GGG | 0.606488 | 2.1:-6411636 | MS.gene45533:CDS |
| CAATATTGAGTTCTTTCTCG+AGG | 0.608230 | 2.1:+6411218 | None:intergenic |
| TCACCGACAACTCCTCCCAT+AGG | 0.620299 | 2.1:+6411579 | None:intergenic |
| CATGAGAACAAAGGAAGAGG+TGG | 0.621705 | 2.1:-6415294 | MS.gene45533:CDS |
| AAGTATGATTCTGAAAATCG+TGG | 0.629512 | 2.1:-6413560 | MS.gene45533:CDS |
| CAAGGGAAACACAAGCGTTG+AGG | 0.630371 | 2.1:-6411107 | MS.gene45533:CDS |
| AGGAAAGCCGAAGAGCCTAT+GGG | 0.632474 | 2.1:-6411594 | MS.gene45533:CDS |
| GATTCAAATGAAAGTCCTCA+GGG | 0.638771 | 2.1:-6411193 | MS.gene45533:CDS |
| ATTCTGACAGGACAATGCAC+AGG | 0.657086 | 2.1:-6413642 | MS.gene45533:intron |
| TTAGATGAATTTCCTCCCTG+AGG | 0.666308 | 2.1:+6411178 | None:intergenic |
| ACTCAAGGTGAAGCTAGCAA+GGG | 0.673091 | 2.1:-6411124 | MS.gene45533:CDS |
| AAAGCCGAAGAGCCTATGGG+AGG | 0.695988 | 2.1:-6411591 | MS.gene45533:CDS |
| TCAAATGAAAGTCCTCAGGG+AGG | 0.744401 | 2.1:-6411190 | MS.gene45533:CDS |
| GTAGTTGTAAGAGCAAGGCG+TGG | 0.746025 | 2.1:-6415252 | MS.gene45533:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATTTTGATTTTGTTT+TGG | - | chr2.1:6414208-6414227 | MS.gene45533:intron | 10.0% |
| !! | AAAAAAAAATAGATCAGTAA+TGG | + | chr2.1:6413874-6413893 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGATCAGTAAT+GGG | + | chr2.1:6413873-6413892 | None:intergenic | 15.0% |
| !! | TGCTAATAATATCATAATAA+TGG | + | chr2.1:6411462-6411481 | None:intergenic | 15.0% |
| !! | TTAGAAAAATAAAACAACAT+AGG | + | chr2.1:6412305-6412324 | None:intergenic | 15.0% |
| !!! | ATATCTTAATGGATTTATTA+TGG | + | chr2.1:6413183-6413202 | None:intergenic | 15.0% |
| !!! | ATGTGATTTTAAAAACAAAT+AGG | + | chr2.1:6414956-6414975 | None:intergenic | 15.0% |
| !!! | ATGTTGTTTTATTTTTCTAA+AGG | - | chr2.1:6412305-6412324 | MS.gene45533:intron | 15.0% |
| !!! | TTTTTGAAATTTTAACTTTC+AGG | - | chr2.1:6415109-6415128 | MS.gene45533:intron | 15.0% |
| !! | AAAATAGATTTGTAACTTTG+AGG | + | chr2.1:6414047-6414066 | None:intergenic | 20.0% |
| !! | AAGTTACTAATTTGATCAAA+TGG | + | chr2.1:6414410-6414429 | None:intergenic | 20.0% |
| !! | AATATAGATAAAGGATAATC+TGG | - | chr2.1:6413803-6413822 | MS.gene45533:intron | 20.0% |
| !! | ATAATGATGTAGTCATATAA+CGG | - | chr2.1:6412593-6412612 | MS.gene45533:intron | 20.0% |
| !! | ATATTATTAGTAGGATGTAA+TGG | - | chr2.1:6413080-6413099 | MS.gene45533:intron | 20.0% |
| !! | CTTAGTAGTTTATTATTATG+TGG | - | chr2.1:6411290-6411309 | MS.gene45533:intron | 20.0% |
| !! | GAGTGATAAAAATATCTTAA+TGG | + | chr2.1:6413194-6413213 | None:intergenic | 20.0% |
| !! | TAAAATTTGTAATGAAATGC+AGG | + | chr2.1:6414572-6414591 | None:intergenic | 20.0% |
| !! | TAATAGTAAACTTCAGTTTA+AGG | + | chr2.1:6413219-6413238 | None:intergenic | 20.0% |
| !! | TTTGAAGATAAAAGATTTCA+TGG | - | chr2.1:6411528-6411547 | MS.gene45533:intron | 20.0% |
| !!! | AAAACTTTTTAAATTGACAG+TGG | - | chr2.1:6415006-6415025 | MS.gene45533:intron | 20.0% |
| !!! | AATTTTAACTTTCAGGAAAT+AGG | - | chr2.1:6415116-6415135 | MS.gene45533:intron | 20.0% |
| !!! | CATTTCATTACAAATTTTAC+TGG | - | chr2.1:6414573-6414592 | MS.gene45533:intron | 20.0% |
| !!! | GTTTTATATTTCATTTCATG+TGG | - | chr2.1:6414666-6414685 | MS.gene45533:intron | 20.0% |
| !!! | TAACATTTTTATTTGTGTGT+TGG | - | chr2.1:6414829-6414848 | MS.gene45533:intron | 20.0% |
| !!! | TACTCTTTTCTATGTTAATT+TGG | - | chr2.1:6413110-6413129 | MS.gene45533:intron | 20.0% |
| !!! | TTCTAAGGTAATATAGATAA+AGG | - | chr2.1:6413794-6413813 | MS.gene45533:intron | 20.0% |
| !!! | TTTTAGAAAAACAAGGATAA+AGG | - | chr2.1:6412525-6412544 | MS.gene45533:intron | 20.0% |
| ! | AAATCCACAAAGATATTCTA+AGG | - | chr2.1:6413779-6413798 | MS.gene45533:intron | 25.0% |
| ! | AAGGATTCAATTATATACAC+TGG | - | chr2.1:6414861-6414880 | MS.gene45533:intron | 25.0% |
| ! | ACACAAATAAAAATGTTAGC+GGG | + | chr2.1:6414827-6414846 | None:intergenic | 25.0% |
| ! | ACTAATAGTACTAGTACTTA+AGG | + | chr2.1:6413726-6413745 | None:intergenic | 25.0% |
| ! | AGAGATGTTCAAATAACAAT+AGG | - | chr2.1:6414493-6414512 | MS.gene45533:intron | 25.0% |
| ! | ATCAAAAGAGATGAAATACA+AGG | - | chr2.1:6413926-6413945 | MS.gene45533:intron | 25.0% |
| ! | ATCCTACTAATAATATATGC+CGG | + | chr2.1:6413076-6413095 | None:intergenic | 25.0% |
| ! | ATCTGTGAATGAAATCAAAA+AGG | - | chr2.1:6411185-6411204 | MS.gene45533:CDS | 25.0% |
| ! | ATGAAATCAAAAAGGCTTAT+AGG | - | chr2.1:6411193-6411212 | MS.gene45533:CDS | 25.0% |
| ! | ATTACCTCTTTATTAACATC+AGG | + | chr2.1:6411240-6411259 | None:intergenic | 25.0% |
| ! | ATTACCTTAGAATATCTTTG+TGG | + | chr2.1:6413786-6413805 | None:intergenic | 25.0% |
| ! | ATTATGGCTATATCATTAGT+TGG | + | chr2.1:6413167-6413186 | None:intergenic | 25.0% |
| ! | CAATAGTTTCCTGTAAAAAT+GGG | + | chr2.1:6413426-6413445 | None:intergenic | 25.0% |
| ! | CACACAAATAAAAATGTTAG+CGG | + | chr2.1:6414828-6414847 | None:intergenic | 25.0% |
| ! | CTACAGAAAATGTTAAATAG+TGG | - | chr2.1:6411610-6411629 | MS.gene45533:CDS | 25.0% |
| ! | TAAAGGAGAACATAAATAGA+GGG | + | chr2.1:6414299-6414318 | None:intergenic | 25.0% |
| ! | TGACATTCATACTATAATCA+TGG | + | chr2.1:6412186-6412205 | None:intergenic | 25.0% |
| ! | TGGCTATAGAAATAGAATAA+GGG | - | chr2.1:6411101-6411120 | MS.gene45533:CDS | 25.0% |
| ! | TGTGAAATAACAACTATAGT+GGG | - | chr2.1:6411682-6411701 | MS.gene45533:intron | 25.0% |
| ! | TTAATTTAACGAAGATGGTA+CGG | - | chr2.1:6414245-6414264 | MS.gene45533:intron | 25.0% |
| ! | TTGTGAAATAACAACTATAG+TGG | - | chr2.1:6411681-6411700 | MS.gene45533:intron | 25.0% |
| !! | AATTGTCAGATACAATCTTT+TGG | + | chr2.1:6412645-6412664 | None:intergenic | 25.0% |
| !! | ATACTTTTCTTGAGTATTTG+GGG | + | chr2.1:6413523-6413542 | None:intergenic | 25.0% |
| !! | ATATCTTTGTGGATTTGTTT+AGG | + | chr2.1:6413775-6413794 | None:intergenic | 25.0% |
| !! | ATGTAGTAGTATTTGTCTTT+TGG | - | chr2.1:6413657-6413676 | MS.gene45533:intron | 25.0% |
| !! | CAATAAGTTGGAAAAAGTTT+CGG | - | chr2.1:6412155-6412174 | MS.gene45533:intron | 25.0% |
| !! | GAAGAAGAATTTTATGGATT+AGG | - | chr2.1:6412881-6412900 | MS.gene45533:intron | 25.0% |
| !! | GATACTTTTCTTGAGTATTT+GGG | + | chr2.1:6413524-6413543 | None:intergenic | 25.0% |
| !! | TATTTTATGCTCCAATAAGT+TGG | - | chr2.1:6412143-6412162 | MS.gene45533:intron | 25.0% |
| !! | TGATACTTTTCTTGAGTATT+TGG | + | chr2.1:6413525-6413544 | None:intergenic | 25.0% |
| !! | TGGATTTAATTTAACGAAGA+TGG | - | chr2.1:6414240-6414259 | MS.gene45533:intron | 25.0% |
| !! | TTATGTGGAAGTTTTTGTAT+AGG | - | chr2.1:6411305-6411324 | MS.gene45533:intron | 25.0% |
| !! | TTGTCTTTTGGATTAAAAGA+GGG | - | chr2.1:6413669-6413688 | MS.gene45533:intron | 25.0% |
| !! | TTTGTCTTTTGGATTAAAAG+AGG | - | chr2.1:6413668-6413687 | MS.gene45533:intron | 25.0% |
| !!! | ATTTTAAAGTGTATTCTGAC+AGG | - | chr2.1:6412721-6412740 | MS.gene45533:intron | 25.0% |
| !!! | CAAGTTGAAGAAGAATTTTA+TGG | - | chr2.1:6412875-6412894 | MS.gene45533:intron | 25.0% |
| !!! | CATCTCTTTTGATTAATGAA+AGG | + | chr2.1:6413919-6413938 | None:intergenic | 25.0% |
| !!! | GTATGGATTTTAGAAAAACA+AGG | - | chr2.1:6412518-6412537 | MS.gene45533:intron | 25.0% |
| !!! | TATTTTTCTAAAGGAAATCC+CGG | - | chr2.1:6412314-6412333 | MS.gene45533:intron | 25.0% |
| !!! | TCTGATGATTTTGTTATTAC+AGG | - | chr2.1:6414698-6414717 | MS.gene45533:intron | 25.0% |
| !!! | TTTTGTTTTGGTTTATTGTG+TGG | - | chr2.1:6414220-6414239 | MS.gene45533:intron | 25.0% |
| AAAAGAGATGAAATACAAGG+AGG | - | chr2.1:6413929-6413948 | MS.gene45533:intron | 30.0% | |
| AACAATGTGCTTTACTAACA+AGG | + | chr2.1:6412115-6412134 | None:intergenic | 30.0% | |
| AACATAGGAAAATCCAAGAT+TGG | + | chr2.1:6412290-6412309 | None:intergenic | 30.0% | |
| AACCGGCATATATTATTAGT+AGG | - | chr2.1:6413071-6413090 | MS.gene45533:intron | 30.0% | |
| AATCTCTAACAACAACCAAA+TGG | - | chr2.1:6414099-6414118 | MS.gene45533:intron | 30.0% | |
| AATTACAGCCTTAGGATAAT+AGG | - | chr2.1:6413005-6413024 | MS.gene45533:intron | 30.0% | |
| AATTGTTAAGAGTCCAACAT+CGG | - | chr2.1:6411785-6411804 | MS.gene45533:intron | 30.0% | |
| AGGATTAGGGAAAAAGAAAA+AGG | - | chr2.1:6413025-6413044 | MS.gene45533:intron | 30.0% | |
| AGTTTATTACGCATGACTTA+AGG | + | chr2.1:6413634-6413653 | None:intergenic | 30.0% | |
| ATCATATTTCAGTCATGCTT+CGG | + | chr2.1:6413695-6413714 | None:intergenic | 30.0% | |
| CACTATTGTTTGTGATTTAG+GGG | - | chr2.1:6411412-6411431 | MS.gene45533:intron | 30.0% | |
| CATAGAACACAACAAAGAAT+TGG | + | chr2.1:6411390-6411409 | None:intergenic | 30.0% | |
| CTAAAGGAGAACATAAATAG+AGG | + | chr2.1:6414300-6414319 | None:intergenic | 30.0% | |
| CTATCATCTTAAGTTTCTGA+TGG | + | chr2.1:6413368-6413387 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr2.1:6411820-6411839 | MS.gene45533:intron | 30.0% | |
| GCAATAGTTTCCTGTAAAAA+TGG | + | chr2.1:6413427-6413446 | None:intergenic | 30.0% | |
| GCACTATTGTTTGTGATTTA+GGG | - | chr2.1:6411411-6411430 | MS.gene45533:intron | 30.0% | |
| GTGGCTATAGAAATAGAATA+AGG | - | chr2.1:6411100-6411119 | MS.gene45533:CDS | 30.0% | |
| TACTAATTTGATCAAATGGC+AGG | + | chr2.1:6414406-6414425 | None:intergenic | 30.0% | |
| TAGTATTAGAAGAGAGTTCA+AGG | + | chr2.1:6414324-6414343 | None:intergenic | 30.0% | |
| TATTACAGGAGACTTCTTTA+AGG | - | chr2.1:6414712-6414731 | MS.gene45533:intron | 30.0% | |
| TATTCTTAGAAATCGTGGTT+GGG | + | chr2.1:6411890-6411909 | None:intergenic | 30.0% | |
| TCAATATTCACAGCACAATT+TGG | + | chr2.1:6411585-6411604 | None:intergenic | 30.0% | |
| TCATCCTGATGTTAATAAAG+AGG | - | chr2.1:6411233-6411252 | MS.gene45533:CDS | 30.0% | |
| TCCATTATTCTTAGAAATCG+TGG | + | chr2.1:6411895-6411914 | None:intergenic | 30.0% | |
| TCCCATATAAATCTATCAAC+CGG | - | chr2.1:6414612-6414631 | MS.gene45533:intron | 30.0% | |
| TCTGACAATGTGTTTATAAG+TGG | - | chr2.1:6411819-6411838 | MS.gene45533:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr2.1:6411821-6411840 | MS.gene45533:intron | 30.0% | |
| TGCACTATTGTTTGTGATTT+AGG | - | chr2.1:6411410-6411429 | MS.gene45533:intron | 30.0% | |
| TGTTTATCATCTTCCAATCT+TGG | - | chr2.1:6412274-6412293 | MS.gene45533:intron | 30.0% | |
| TTATTCTTAGAAATCGTGGT+TGG | + | chr2.1:6411891-6411910 | None:intergenic | 30.0% | |
| TTCATGGTTGCAAACTTTAT+TGG | - | chr2.1:6411544-6411563 | MS.gene45533:intron | 30.0% | |
| TTGAGGTTAAGTTTATTCAG+AGG | + | chr2.1:6414030-6414049 | None:intergenic | 30.0% | |
| TTTCAGAATCATACTTTCTG+CGG | + | chr2.1:6412811-6412830 | None:intergenic | 30.0% | |
| TTTCCTAGATCTTGTTAAGA+TGG | + | chr2.1:6413842-6413861 | None:intergenic | 30.0% | |
| ! | AAGTATGATTCTGAAAATCG+TGG | - | chr2.1:6412815-6412834 | MS.gene45533:intron | 30.0% |
| ! | ACCACGATTTCTAAGAATAA+TGG | - | chr2.1:6411891-6411910 | MS.gene45533:CDS | 30.0% |
| ! | TGCTATGTTCAACACTTTTA+TGG | - | chr2.1:6411260-6411279 | MS.gene45533:intron | 30.0% |
| ! | TGGAAGTTTTTGTATAGGTT+TGG | - | chr2.1:6411310-6411329 | MS.gene45533:intron | 30.0% |
| !! | AATTCACAAACCGATTTTGT+GGG | - | chr2.1:6411853-6411872 | MS.gene45533:intron | 30.0% |
| !! | AATTTTTGTTTGTCCATCAG+CGG | + | chr2.1:6412445-6412464 | None:intergenic | 30.0% |
| !! | ATTGAAGGTTTTGTGATTTG+AGG | + | chr2.1:6413323-6413342 | None:intergenic | 30.0% |
| !! | ATTTTTCTAAAGGAAATCCC+GGG | - | chr2.1:6412315-6412334 | MS.gene45533:intron | 30.0% |
| !! | CGAAACTTTTTCCAACTTAT+TGG | + | chr2.1:6412157-6412176 | None:intergenic | 30.0% |
| !! | CTATATCTGATTCTGAAACT+AGG | + | chr2.1:6411054-6411073 | None:intergenic | 30.0% |
| !! | TACTTATTTGCAGTCTTGTT+TGG | - | chr2.1:6412914-6412933 | MS.gene45533:intron | 30.0% |
| !! | TCAAGAAAAGTATCAAACAC+TGG | - | chr2.1:6413530-6413549 | MS.gene45533:CDS | 30.0% |
| !! | TTGAAGGTTTTGTGATTTGA+GGG | + | chr2.1:6413322-6413341 | None:intergenic | 30.0% |
| !!! | TAGCAGTTTTGAATGATATG+TGG | - | chr2.1:6411477-6411496 | MS.gene45533:intron | 30.0% |
| AAAAGAAAAAGGCAGAAAGG+TGG | - | chr2.1:6413036-6413055 | MS.gene45533:intron | 35.0% | |
| AAATAACAACGTGAGAAGAC+TGG | - | chr2.1:6412213-6412232 | MS.gene45533:intron | 35.0% | |
| AACAAGATCTAGGAAACGAT+TGG | - | chr2.1:6413846-6413865 | MS.gene45533:intron | 35.0% | |
| AACTGCACCAAATACATGAA+TGG | + | chr2.1:6414169-6414188 | None:intergenic | 35.0% | |
| AATAACAACGTGAGAAGACT+GGG | - | chr2.1:6412214-6412233 | MS.gene45533:intron | 35.0% | |
| ACAAGGAGACTTAAAAAGTC+AGG | + | chr2.1:6412098-6412117 | None:intergenic | 35.0% | |
| ACATAAATAGAGGGTGATTG+AGG | + | chr2.1:6414290-6414309 | None:intergenic | 35.0% | |
| AGCCTTAGGATAATAGGATT+AGG | - | chr2.1:6413011-6413030 | MS.gene45533:intron | 35.0% | |
| AGCTCATAATCTAGCTATAG+CGG | + | chr2.1:6413993-6414012 | None:intergenic | 35.0% | |
| ATAGGTAGCTATATACTCTC+TGG | - | chr2.1:6414511-6414530 | MS.gene45533:intron | 35.0% | |
| ATTGTGCTGTGAATATTGAC+TGG | - | chr2.1:6411586-6411605 | MS.gene45533:CDS | 35.0% | |
| ATTTCATTCACAGATGCAGA+TGG | + | chr2.1:6411180-6411199 | None:intergenic | 35.0% | |
| CAAATAAAAATGTTAGCGGG+AGG | + | chr2.1:6414824-6414843 | None:intergenic | 35.0% | |
| CAATATTGAGTTCTTTCTCG+AGG | + | chr2.1:6415160-6415179 | None:intergenic | 35.0% | |
| CCCATATAAATCTATCAACC+GGG | - | chr2.1:6414613-6414632 | MS.gene45533:intron | 35.0% | |
| CGAGTTATGTTCAGAATTGA+AGG | + | chr2.1:6413338-6413357 | None:intergenic | 35.0% | |
| CTAAGGCTGTAATTCTGTAA+CGG | + | chr2.1:6412999-6413018 | None:intergenic | 35.0% | |
| CTAATGTGCTAAGTTTCTCT+TGG | + | chr2.1:6413449-6413468 | None:intergenic | 35.0% | |
| CTAGAACCATCTTAAATGTG+TGG | - | chr2.1:6412072-6412091 | MS.gene45533:intron | 35.0% | |
| CTCATCTAGCCAAATAACTT+AGG | - | chr2.1:6413279-6413298 | MS.gene45533:intron | 35.0% | |
| CTTCCATCTTAACAAGATCT+AGG | - | chr2.1:6413836-6413855 | MS.gene45533:intron | 35.0% | |
| GACAAACCAAGAACTTCATA+TGG | + | chr2.1:6411156-6411175 | None:intergenic | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr2.1:6411822-6411841 | MS.gene45533:intron | 35.0% | |
| GAGGAACAAAATCAAAGACT+CGG | - | chr2.1:6413948-6413967 | MS.gene45533:intron | 35.0% | |
| GATTCAAATGAAAGTCCTCA+GGG | - | chr2.1:6415182-6415201 | MS.gene45533:CDS | 35.0% | |
| GCCTTAGGATAATAGGATTA+GGG | - | chr2.1:6413012-6413031 | MS.gene45533:intron | 35.0% | |
| GGAAAAAGAAAAAGGCAGAA+AGG | - | chr2.1:6413033-6413052 | MS.gene45533:intron | 35.0% | |
| TCAAGAAGAGTTCAAGAACT+GGG | - | chr2.1:6414739-6414758 | MS.gene45533:intron | 35.0% | |
| TCATCTTAAGTTTCTGATGG+AGG | + | chr2.1:6413365-6413384 | None:intergenic | 35.0% | |
| TCCCTAATCCTATTATCCTA+AGG | + | chr2.1:6413016-6413035 | None:intergenic | 35.0% | |
| TGATTCAAATGAAAGTCCTC+AGG | - | chr2.1:6415181-6415200 | MS.gene45533:CDS | 35.0% | |
| TGCTAGTTGCCTAAGTTATT+TGG | + | chr2.1:6413291-6413310 | None:intergenic | 35.0% | |
| TGTCAATCAATCGTGATCAT+CGG | - | chr2.1:6414905-6414924 | MS.gene45533:intron | 35.0% | |
| TTCAAGAAGAGTTCAAGAAC+TGG | - | chr2.1:6414738-6414757 | MS.gene45533:intron | 35.0% | |
| TTCAGAATCATACTTTCTGC+GGG | + | chr2.1:6412810-6412829 | None:intergenic | 35.0% | |
| ! | ATGCACAGGAGAAATTTTTG+AGG | - | chr2.1:6412747-6412766 | MS.gene45533:intron | 35.0% |
| ! | GCTATATCATTAGTTGGCTT+GGG | + | chr2.1:6413161-6413180 | None:intergenic | 35.0% |
| ! | GTCATATAACGGCTCTATTT+TGG | - | chr2.1:6412604-6412623 | MS.gene45533:intron | 35.0% |
| ! | TCAGATACAATCTTTTGGCA+CGG | + | chr2.1:6412640-6412659 | None:intergenic | 35.0% |
| ! | TTTTCTTGAGTATTTGGGGA+TGG | + | chr2.1:6413519-6413538 | None:intergenic | 35.0% |
| !! | AAACTGCAACCCATTTTTAC+AGG | - | chr2.1:6413414-6413433 | MS.gene45533:intron | 35.0% |
| !! | ATTCACAAACCGATTTTGTG+GGG | - | chr2.1:6411854-6411873 | MS.gene45533:intron | 35.0% |
| !! | CAATTCACAAACCGATTTTG+TGG | - | chr2.1:6411852-6411871 | MS.gene45533:intron | 35.0% |
| !! | CCCGGTTGATAGATTTATAT+GGG | + | chr2.1:6414616-6414635 | None:intergenic | 35.0% |
| !! | TCCCGGTTGATAGATTTATA+TGG | + | chr2.1:6414617-6414636 | None:intergenic | 35.0% |
| !! | TGAAGGTTTTGTGATTTGAG+GGG | + | chr2.1:6413321-6413340 | None:intergenic | 35.0% |
| AAAATGATGAGTCCACGTGT+AGG | + | chr2.1:6415093-6415112 | None:intergenic | 40.0% | |
| AAAGCCTTCAGTATGCAACA+AGG | - | chr2.1:6415066-6415085 | MS.gene45533:intron | 40.0% | |
| AAATAGAAGCCACTCTAGCT+CGG | - | chr2.1:6415303-6415322 | MS.gene45533:CDS | 40.0% | |
| AAATCTATCAACCGGGACAA+AGG | - | chr2.1:6414620-6414639 | MS.gene45533:intron | 40.0% | |
| AATCTATCAACCGGGACAAA+GGG | - | chr2.1:6414621-6414640 | MS.gene45533:intron | 40.0% | |
| ACAATCAGTGTTGTCAACTG+CGG | + | chr2.1:6411754-6411773 | None:intergenic | 40.0% | |
| ACCTTGTGACAATGTGAAAG+TGG | + | chr2.1:6411979-6411998 | None:intergenic | 40.0% | |
| AGAAAGCAGCATGAGAACAA+AGG | - | chr2.1:6411072-6411091 | MS.gene45533:CDS | 40.0% | |
| AGGTAATTGTTCTTGTCGCT+AGG | + | chr2.1:6413755-6413774 | None:intergenic | 40.0% | |
| ATACCTCGCTGAAAACCATT+TGG | + | chr2.1:6414117-6414136 | None:intergenic | 40.0% | |
| ATCCTGAACCATTCAAACAC+AGG | - | chr2.1:6413472-6413491 | MS.gene45533:intron | 40.0% | |
| ATTTGATCAAATGGCAGGAC+AGG | + | chr2.1:6414401-6414420 | None:intergenic | 40.0% | |
| CAAATTCCGGTACACGATAA+AGG | + | chr2.1:6411708-6411727 | None:intergenic | 40.0% | |
| CAGCAGACCATTCATGTATT+TGG | - | chr2.1:6414159-6414178 | MS.gene45533:intron | 40.0% | |
| CATTGTCACAAGGTTTGTCA+TGG | - | chr2.1:6411985-6412004 | MS.gene45533:intron | 40.0% | |
| CGTTACAGAATTACAGCCTT+AGG | - | chr2.1:6412997-6413016 | MS.gene45533:intron | 40.0% | |
| CTAACACAACCCCACAAAAT+CGG | + | chr2.1:6411866-6411885 | None:intergenic | 40.0% | |
| CTACAAGTGTACATACATGC+AGG | + | chr2.1:6412252-6412271 | None:intergenic | 40.0% | |
| CTTAAGTTTCTGATGGAGGT+CGG | + | chr2.1:6413361-6413380 | None:intergenic | 40.0% | |
| GAAGAGAGTTCAAGGACTAA+AGG | + | chr2.1:6414316-6414335 | None:intergenic | 40.0% | |
| GAGTCTCCATATGAAGTTCT+TGG | - | chr2.1:6411147-6411166 | MS.gene45533:CDS | 40.0% | |
| GAGTGGCTTCTATTTCATCA+AGG | + | chr2.1:6415298-6415317 | None:intergenic | 40.0% | |
| GCTCGGTTAAAAAAGGAGTT+AGG | - | chr2.1:6415320-6415339 | MS.gene45533:CDS | 40.0% | |
| GGAAATAGGCGAAGAATTTG+TGG | - | chr2.1:6415130-6415149 | MS.gene45533:intron | 40.0% | |
| GGCTATATCATTAGTTGGCT+TGG | + | chr2.1:6413162-6413181 | None:intergenic | 40.0% | |
| GTGAGTGATCATCACAAGTT+TGG | + | chr2.1:6413568-6413587 | None:intergenic | 40.0% | |
| TAAGGGTAGTTGTAAGAGCA+AGG | - | chr2.1:6411118-6411137 | MS.gene45533:CDS | 40.0% | |
| TACGCATGACTTAAGGTTCA+GGG | + | chr2.1:6413627-6413646 | None:intergenic | 40.0% | |
| TCCACTTTCACATTGTCACA+AGG | - | chr2.1:6411975-6411994 | MS.gene45533:intron | 40.0% | |
| TGAAATGCAGGCTAAACTCA+TGG | + | chr2.1:6414560-6414579 | None:intergenic | 40.0% | |
| TGAACCATTCAAACACAGGA+AGG | - | chr2.1:6413476-6413495 | MS.gene45533:intron | 40.0% | |
| TGGTGCAGTTAAAAACTGTC+AGG | - | chr2.1:6414179-6414198 | MS.gene45533:intron | 40.0% | |
| TGTGTGTTGGAGTTCAGTTA+AGG | - | chr2.1:6414842-6414861 | MS.gene45533:intron | 40.0% | |
| TTACGCATGACTTAAGGTTC+AGG | + | chr2.1:6413628-6413647 | None:intergenic | 40.0% | |
| TTAGATGAATTTCCTCCCTG+AGG | + | chr2.1:6415200-6415219 | None:intergenic | 40.0% | |
| TTCCTGTGTTTGAATGGTTC+AGG | + | chr2.1:6413477-6413496 | None:intergenic | 40.0% | |
| TTCTCTTCTGTCTGCTTGTT+TGG | + | chr2.1:6413393-6413412 | None:intergenic | 40.0% | |
| TTGAAAGCCAGTTATCACGA+TGG | + | chr2.1:6412492-6412511 | None:intergenic | 40.0% | |
| TTGATCACCATCGTGATAAC+TGG | - | chr2.1:6412482-6412501 | MS.gene45533:intron | 40.0% | |
| ! | CACTCTAGCTCGGTTAAAAA+AGG | - | chr2.1:6415313-6415332 | MS.gene45533:CDS | 40.0% |
| ! | CCTTACACTGCATTTTGCTA+GGG | - | chr2.1:6414073-6414092 | MS.gene45533:intron | 40.0% |
| ! | CTGGCTTTCAATCATGAGTA+TGG | - | chr2.1:6412501-6412520 | MS.gene45533:intron | 40.0% |
| ! | CTTACACTGCATTTTGCTAG+GGG | - | chr2.1:6414074-6414093 | MS.gene45533:intron | 40.0% |
| ! | TATTCAGAGGCATGCGAATA+TGG | + | chr2.1:6414017-6414036 | None:intergenic | 40.0% |
| ! | TGCATACTGAAGGCTTTTCT+TGG | + | chr2.1:6415063-6415082 | None:intergenic | 40.0% |
| !! | CAACTTGTTGATTCCAACTC+TGG | + | chr2.1:6412862-6412881 | None:intergenic | 40.0% |
| !!! | CTTTTTTAACCGAGCTAGAG+TGG | + | chr2.1:6415315-6415334 | None:intergenic | 40.0% |
| ACTCAAGGTGAAGCTAGCAA+GGG | - | chr2.1:6415251-6415270 | MS.gene45533:CDS | 45.0% | |
| AGGAAGGAGAGACACATATC+TGG | - | chr2.1:6413492-6413511 | MS.gene45533:intron | 45.0% | |
| AGGTCCTTGTTGCATACTGA+AGG | + | chr2.1:6415073-6415092 | None:intergenic | 45.0% | |
| ATAGCGGCCATTTCCTATGT+TGG | + | chr2.1:6413977-6413996 | None:intergenic | 45.0% | |
| ATTCTGACAGGACAATGCAC+AGG | - | chr2.1:6412733-6412752 | MS.gene45533:intron | 45.0% | |
| CAGCATGAGAACAAAGGAAG+AGG | - | chr2.1:6411078-6411097 | MS.gene45533:CDS | 45.0% | |
| CATGAGAACAAAGGAAGAGG+TGG | - | chr2.1:6411081-6411100 | MS.gene45533:CDS | 45.0% | |
| CCCTAGCAAAATGCAGTGTA+AGG | + | chr2.1:6414076-6414095 | None:intergenic | 45.0% | |
| CTCTCCTTCCTGTGTTTGAA+TGG | + | chr2.1:6413483-6413502 | None:intergenic | 45.0% | |
| CTTCTCAAAGAAGCCAGAGT+TGG | - | chr2.1:6412846-6412865 | MS.gene45533:intron | 45.0% | |
| GACCATCACTTATCCGATGT+TGG | + | chr2.1:6411801-6411820 | None:intergenic | 45.0% | |
| GGTGGTGCAAAGTGATAAAC+CGG | - | chr2.1:6413054-6413073 | MS.gene45533:intron | 45.0% | |
| GTCAGACGGAATTGTAGTGA+TGG | - | chr2.1:6413599-6413618 | MS.gene45533:CDS | 45.0% | |
| GTCAGGCCACACATTTAAGA+TGG | + | chr2.1:6412081-6412100 | None:intergenic | 45.0% | |
| GTCCAACATCGGATAAGTGA+TGG | - | chr2.1:6411796-6411815 | MS.gene45533:intron | 45.0% | |
| TCAAATGAAAGTCCTCAGGG+AGG | - | chr2.1:6415185-6415204 | MS.gene45533:CDS | 45.0% | |
| TTTCAGCGAGGTATACAGCT+CGG | - | chr2.1:6414123-6414142 | MS.gene45533:intron | 45.0% | |
| ! | CAACCAAATGGTTTTCAGCG+AGG | - | chr2.1:6414111-6414130 | MS.gene45533:intron | 45.0% |
| ! | CGATTTTGTGGGGTTGTGTT+AGG | - | chr2.1:6411864-6411883 | MS.gene45533:intron | 45.0% |
| ! | CTGCGGATTGTGGAAAATAG+CGG | + | chr2.1:6411737-6411756 | None:intergenic | 45.0% |
| ! | GATCATCACAAGTTTGGAGC+AGG | + | chr2.1:6413562-6413581 | None:intergenic | 45.0% |
| ! | GCCTTACACTGCATTTTGCT+AGG | - | chr2.1:6414072-6414091 | MS.gene45533:intron | 45.0% |
| ! | TGCGGATTGTGGAAAATAGC+GGG | + | chr2.1:6411736-6411755 | None:intergenic | 45.0% |
| !! | ATAGCGGGCTGTTCAAATTC+CGG | + | chr2.1:6411721-6411740 | None:intergenic | 45.0% |
| AAAGACTCGGCGACCAACAT+AGG | - | chr2.1:6413961-6413980 | MS.gene45533:intron | 50.0% | |
| AACTCCTCCCATAGGCTCTT+CGG | + | chr2.1:6414791-6414810 | None:intergenic | 50.0% | |
| AAGGAAAGCCGAAGAGCCTA+TGG | - | chr2.1:6414780-6414799 | MS.gene45533:intron | 50.0% | |
| ACACCAAGCAACAGCACTCA+AGG | - | chr2.1:6415236-6415255 | MS.gene45533:CDS | 50.0% | |
| AGGAAAGCCGAAGAGCCTAT+GGG | - | chr2.1:6414781-6414800 | MS.gene45533:intron | 50.0% | |
| AGTGGGCCTTTATCGTGTAC+CGG | - | chr2.1:6411699-6411718 | MS.gene45533:intron | 50.0% | |
| ATGCAACAAGGACCTACACG+TGG | - | chr2.1:6415078-6415097 | MS.gene45533:intron | 50.0% | |
| ATGCAGGCTAAACTCATGGC+TGG | + | chr2.1:6414556-6414575 | None:intergenic | 50.0% | |
| CAAGAACTGGGAAGCTAGTG+CGG | - | chr2.1:6414751-6414770 | MS.gene45533:intron | 50.0% | |
| CACTCAAGGTGAAGCTAGCA+AGG | - | chr2.1:6415250-6415269 | MS.gene45533:CDS | 50.0% | |
| CCGGGTCAGCACTAAAATGA+CGG | - | chr2.1:6412333-6412352 | MS.gene45533:intron | 50.0% | |
| CTAGTGACATCCCTTTGTCC+CGG | + | chr2.1:6414634-6414653 | None:intergenic | 50.0% | |
| GTAGTTGTAAGAGCAAGGCG+TGG | - | chr2.1:6411123-6411142 | MS.gene45533:CDS | 50.0% | |
| TCGGCGACCAACATAGGAAA+TGG | - | chr2.1:6413967-6413986 | MS.gene45533:intron | 50.0% | |
| TGATCACTCACCTGTCTGAG+AGG | - | chr2.1:6413577-6413596 | MS.gene45533:CDS | 50.0% | |
| TGTCAACATCTTGCTGCTGC+AGG | - | chr2.1:6414460-6414479 | MS.gene45533:intron | 50.0% | |
| ! | CAAGGGAAACACAAGCGTTG+AGG | - | chr2.1:6415268-6415287 | MS.gene45533:CDS | 50.0% |
| ! | GTGTTGTCAACTGCGGATTG+TGG | + | chr2.1:6411747-6411766 | None:intergenic | 50.0% |
| ! | GTTTTGTGATTTGAGGGGCG+TGG | + | chr2.1:6413316-6413335 | None:intergenic | 50.0% |
| ! | TCACCTTGAGTGCTGTTGCT+TGG | + | chr2.1:6415242-6415261 | None:intergenic | 50.0% |
| !!! | CCGTCATTTTAGTGCTGACC+CGG | + | chr2.1:6412336-6412355 | None:intergenic | 50.0% |
| !!! | CGTCATTTTAGTGCTGACCC+GGG | + | chr2.1:6412335-6412354 | None:intergenic | 50.0% |
| AAAGCCGAAGAGCCTATGGG+AGG | - | chr2.1:6414784-6414803 | MS.gene45533:intron | 55.0% | |
| CACCTGTCTGAGAGGTCAGA+CGG | - | chr2.1:6413585-6413604 | MS.gene45533:CDS | 55.0% | |
| CTCTCTCTCTCTTCCGCTGA+TGG | - | chr2.1:6412429-6412448 | MS.gene45533:intron | 55.0% | |
| GAGCCTATGGGAGGAGTTGT+CGG | - | chr2.1:6414793-6414812 | MS.gene45533:intron | 55.0% | |
| TCACCGACAACTCCTCCCAT+AGG | + | chr2.1:6414799-6414818 | None:intergenic | 55.0% | |
| TTCCGTCTGACCTCTCAGAC+AGG | + | chr2.1:6413590-6413609 | None:intergenic | 55.0% | |
| GAAGCTAGTGCGGCTGCACA+AGG | - | chr2.1:6414761-6414780 | MS.gene45533:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 6411048 | 6415349 | 6411048 | ID=MS.gene45533 |
| chr2.1 | mRNA | 6411048 | 6415349 | 6411048 | ID=MS.gene45533.t1;Parent=MS.gene45533 |
| chr2.1 | exon | 6415143 | 6415349 | 6415143 | ID=MS.gene45533.t1.exon1;Parent=MS.gene45533.t1 |
| chr2.1 | CDS | 6415143 | 6415349 | 6415143 | ID=cds.MS.gene45533.t1;Parent=MS.gene45533.t1 |
| chr2.1 | exon | 6413495 | 6413654 | 6413495 | ID=MS.gene45533.t1.exon2;Parent=MS.gene45533.t1 |
| chr2.1 | CDS | 6413495 | 6413654 | 6413495 | ID=cds.MS.gene45533.t1;Parent=MS.gene45533.t1 |
| chr2.1 | exon | 6411883 | 6411915 | 6411883 | ID=MS.gene45533.t1.exon3;Parent=MS.gene45533.t1 |
| chr2.1 | CDS | 6411883 | 6411915 | 6411883 | ID=cds.MS.gene45533.t1;Parent=MS.gene45533.t1 |
| chr2.1 | exon | 6411583 | 6411677 | 6411583 | ID=MS.gene45533.t1.exon4;Parent=MS.gene45533.t1 |
| chr2.1 | CDS | 6411583 | 6411677 | 6411583 | ID=cds.MS.gene45533.t1;Parent=MS.gene45533.t1 |
| chr2.1 | exon | 6411048 | 6411266 | 6411048 | ID=MS.gene45533.t1.exon5;Parent=MS.gene45533.t1 |
| chr2.1 | CDS | 6411048 | 6411266 | 6411048 | ID=cds.MS.gene45533.t1;Parent=MS.gene45533.t1 |
| Gene Sequence |
| Protein sequence |
