Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82939.t1 | XP_013450807.1 | 97.5 | 242 | 2 | 1 | 17 | 254 | 59 | 300 | 2.20E-125 | 458.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82939.t1 | Q9M3C6 | 60.2 | 256 | 97 | 2 | 1 | 252 | 20 | 274 | 3.7e-81 | 302.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82939.t1 | A0A072U5C5 | 97.5 | 242 | 2 | 1 | 17 | 254 | 59 | 300 | 1.6e-125 | 458.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene82939 | 0.840649 | 7.66E-58 | -1.69E-46 |
| MS.gene049150 | MS.gene82939 | 0.854295 | 1.35E-61 | -1.69E-46 |
| MS.gene049151 | MS.gene82939 | 0.836824 | 7.46E-57 | -1.69E-46 |
| MS.gene049153 | MS.gene82939 | 0.852191 | 5.43E-61 | -1.69E-46 |
| MS.gene049170 | MS.gene82939 | 0.843577 | 1.29E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene82939 | 0.822077 | 2.87E-53 | -1.69E-46 |
| MS.gene049284 | MS.gene82939 | 0.822646 | 2.12E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene82939 | 0.848833 | 4.76E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene82939 | 0.838702 | 2.46E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene82939 | 0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene049599 | MS.gene82939 | -0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene82939 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene82939 | 0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene82939 | 0.87702 | 8.78E-69 | -1.69E-46 |
| MS.gene049910 | MS.gene82939 | 0.859156 | 5.02E-63 | -1.69E-46 |
| MS.gene049915 | MS.gene82939 | 0.850446 | 1.69E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene82939 | 0.851165 | 1.06E-60 | -1.69E-46 |
| MS.gene050128 | MS.gene82939 | 0.861728 | 8.37E-64 | -1.69E-46 |
| MS.gene050168 | MS.gene82939 | 0.804611 | 1.99E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene82939 | 0.802356 | 5.83E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene82939 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene82939 | 0.888182 | 7.41E-73 | -1.69E-46 |
| MS.gene050330 | MS.gene82939 | -0.804223 | 2.40E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene82939 | 0.851309 | 9.65E-61 | -1.69E-46 |
| MS.gene050398 | MS.gene82939 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene82939 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene050404 | MS.gene82939 | 0.863914 | 1.77E-64 | -1.69E-46 |
| MS.gene050406 | MS.gene82939 | 0.890924 | 6.34E-74 | -1.69E-46 |
| MS.gene050426 | MS.gene82939 | -0.891488 | 3.80E-74 | -1.69E-46 |
| MS.gene050432 | MS.gene82939 | 0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene82939 | 0.863649 | 2.14E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene82939 | 0.889726 | 1.87E-73 | -1.69E-46 |
| MS.gene050558 | MS.gene82939 | 0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene82939 | -0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene82939 | 0.865968 | 4.02E-65 | -1.69E-46 |
| MS.gene050670 | MS.gene82939 | 0.894659 | 2.00E-75 | -1.69E-46 |
| MS.gene050812 | MS.gene82939 | 0.832441 | 9.43E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene82939 | 0.805271 | 1.45E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene82939 | 0.827798 | 1.28E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene82939 | 0.817049 | 4.03E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene82939 | 0.836151 | 1.11E-56 | -1.69E-46 |
| MS.gene05119 | MS.gene82939 | -0.827615 | 1.42E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene82939 | 0.840542 | 8.17E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene82939 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene82939 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene051582 | MS.gene82939 | 0.87022 | 1.72E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene82939 | 0.85979 | 3.24E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene82939 | 0.87849 | 2.69E-69 | -1.69E-46 |
| MS.gene052011 | MS.gene82939 | -0.863787 | 1.94E-64 | -1.69E-46 |
| MS.gene052077 | MS.gene82939 | 0.905974 | 2.43E-80 | -1.69E-46 |
| MS.gene052078 | MS.gene82939 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene052134 | MS.gene82939 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene052135 | MS.gene82939 | 0.85021 | 1.97E-60 | -1.69E-46 |
| MS.gene052136 | MS.gene82939 | 0.808816 | 2.57E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene82939 | 0.802885 | 4.54E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene82939 | 0.855119 | 7.81E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene82939 | 0.925167 | 2.65E-90 | -1.69E-46 |
| MS.gene052253 | MS.gene82939 | 0.8918 | 2.85E-74 | -1.69E-46 |
| MS.gene052255 | MS.gene82939 | 0.822233 | 2.64E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene82939 | -0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene82939 | 0.889314 | 2.71E-73 | -1.69E-46 |
| MS.gene052322 | MS.gene82939 | 0.812657 | 3.80E-51 | -1.69E-46 |
| MS.gene05233 | MS.gene82939 | -0.804364 | 2.24E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene82939 | 0.940506 | 2.08E-100 | -1.69E-46 |
| MS.gene052414 | MS.gene82939 | 0.821939 | 3.09E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene82939 | 0.825052 | 5.78E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene82939 | 0.819661 | 1.03E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene82939 | 0.848889 | 4.59E-60 | -1.69E-46 |
| MS.gene052758 | MS.gene82939 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene053073 | MS.gene82939 | 0.85274 | 3.78E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene82939 | 0.817115 | 3.90E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene82939 | 0.85561 | 5.62E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene82939 | 0.850087 | 2.13E-60 | -1.69E-46 |
| MS.gene053330 | MS.gene82939 | 0.833183 | 6.17E-56 | -1.69E-46 |
| MS.gene053494 | MS.gene82939 | 0.836202 | 1.07E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene82939 | 0.896164 | 4.80E-76 | -1.69E-46 |
| MS.gene053559 | MS.gene82939 | 0.823604 | 1.27E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene82939 | 0.891687 | 3.16E-74 | -1.69E-46 |
| MS.gene053907 | MS.gene82939 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene82939 | 0.865509 | 5.61E-65 | -1.69E-46 |
| MS.gene053971 | MS.gene82939 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene82939 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene82939 | 0.863094 | 3.18E-64 | -1.69E-46 |
| MS.gene054183 | MS.gene82939 | 0.859778 | 3.27E-63 | -1.69E-46 |
| MS.gene054327 | MS.gene82939 | 0.801982 | 6.96E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene82939 | 0.893503 | 5.92E-75 | -1.69E-46 |
| MS.gene054473 | MS.gene82939 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene054542 | MS.gene82939 | 0.823711 | 1.20E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene82939 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene82939 | 0.819315 | 1.24E-52 | -1.69E-46 |
| MS.gene054918 | MS.gene82939 | 0.821266 | 4.42E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene82939 | 0.891219 | 4.85E-74 | -1.69E-46 |
| MS.gene054955 | MS.gene82939 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene82939 | 0.864495 | 1.17E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene82939 | 0.911931 | 3.48E-83 | -1.69E-46 |
| MS.gene055277 | MS.gene82939 | 0.830442 | 2.93E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene82939 | 0.807278 | 5.46E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene82939 | 0.870886 | 1.04E-66 | -1.69E-46 |
| MS.gene055428 | MS.gene82939 | 0.850915 | 1.25E-60 | -1.69E-46 |
| MS.gene055539 | MS.gene82939 | 0.836209 | 1.07E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene82939 | 0.909153 | 7.80E-82 | -1.69E-46 |
| MS.gene05556 | MS.gene82939 | 0.807054 | 6.10E-50 | -1.69E-46 |
| MS.gene055601 | MS.gene82939 | -0.814226 | 1.72E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene82939 | 0.835145 | 1.99E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene82939 | 0.819 | 1.46E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene82939 | 0.831572 | 1.55E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene82939 | 0.815215 | 1.04E-51 | -1.69E-46 |
| MS.gene056233 | MS.gene82939 | 0.827023 | 1.97E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene82939 | 0.866171 | 3.47E-65 | -1.69E-46 |
| MS.gene056447 | MS.gene82939 | 0.8074 | 5.15E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene82939 | 0.813187 | 2.91E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene82939 | 0.824987 | 5.99E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene82939 | 0.868773 | 5.09E-66 | -1.69E-46 |
| MS.gene056633 | MS.gene82939 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene82939 | 0.889045 | 3.44E-73 | -1.69E-46 |
| MS.gene056719 | MS.gene82939 | 0.842237 | 2.92E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene82939 | 0.877316 | 6.93E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene82939 | -0.866188 | 3.42E-65 | -1.69E-46 |
| MS.gene056979 | MS.gene82939 | 0.86867 | 5.49E-66 | -1.69E-46 |
| MS.gene05702 | MS.gene82939 | 0.887352 | 1.54E-72 | -1.69E-46 |
| MS.gene057121 | MS.gene82939 | 0.843795 | 1.12E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene82939 | 0.858402 | 8.44E-63 | -1.69E-46 |
| MS.gene057207 | MS.gene82939 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene82939 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene82939 | 0.900148 | 9.79E-78 | -1.69E-46 |
| MS.gene057448 | MS.gene82939 | 0.867031 | 1.85E-65 | -1.69E-46 |
| MS.gene057449 | MS.gene82939 | 0.857555 | 1.51E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene82939 | 0.868773 | 5.09E-66 | -1.69E-46 |
| MS.gene057537 | MS.gene82939 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene82939 | 0.845106 | 4.99E-59 | -1.69E-46 |
| MS.gene057750 | MS.gene82939 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene82939 | 0.828933 | 6.82E-55 | -1.69E-46 |
| MS.gene057796 | MS.gene82939 | 0.803368 | 3.60E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene82939 | 0.834847 | 2.37E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene82939 | 0.824931 | 6.18E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene82939 | 0.8947 | 1.93E-75 | -1.69E-46 |
| MS.gene058007 | MS.gene82939 | 0.841281 | 5.23E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene82939 | 0.864216 | 1.43E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene82939 | 0.864618 | 1.07E-64 | -1.69E-46 |
| MS.gene058142 | MS.gene82939 | 0.902477 | 9.31E-79 | -1.69E-46 |
| MS.gene058233 | MS.gene82939 | 0.840703 | 7.41E-58 | -1.69E-46 |
| MS.gene058276 | MS.gene82939 | 0.875034 | 4.23E-68 | -1.69E-46 |
| MS.gene058293 | MS.gene82939 | 0.827743 | 1.32E-54 | -1.69E-46 |
| MS.gene058365 | MS.gene82939 | 0.863773 | 1.96E-64 | -1.69E-46 |
| MS.gene058371 | MS.gene82939 | 0.821827 | 3.28E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene82939 | 0.823953 | 1.05E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene82939 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene82939 | 0.840125 | 1.05E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene82939 | 0.818329 | 2.08E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene82939 | 0.874883 | 4.77E-68 | -1.69E-46 |
| MS.gene058746 | MS.gene82939 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene82939 | 0.839851 | 1.24E-57 | -1.69E-46 |
| MS.gene058787 | MS.gene82939 | 0.820475 | 6.73E-53 | -1.69E-46 |
| MS.gene058845 | MS.gene82939 | 0.851362 | 9.33E-61 | -1.69E-46 |
| MS.gene05886 | MS.gene82939 | 0.836107 | 1.14E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene82939 | 0.867571 | 1.24E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene82939 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene82939 | 0.87167 | 5.73E-67 | -1.69E-46 |
| MS.gene05907 | MS.gene82939 | 0.874391 | 7.01E-68 | -1.69E-46 |
| MS.gene059141 | MS.gene82939 | 0.809585 | 1.76E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene82939 | 0.837106 | 6.32E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene82939 | 0.910124 | 2.66E-82 | -1.69E-46 |
| MS.gene059294 | MS.gene82939 | 0.837058 | 6.50E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene82939 | 0.838137 | 3.44E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene82939 | 0.873893 | 1.03E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene82939 | 0.818397 | 2.00E-52 | -1.69E-46 |
| MS.gene059511 | MS.gene82939 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene82939 | 0.838784 | 2.34E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene82939 | 0.874627 | 5.83E-68 | -1.69E-46 |
| MS.gene05959 | MS.gene82939 | 0.831123 | 1.99E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene82939 | 0.857371 | 1.71E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene82939 | 0.882233 | 1.24E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene82939 | 0.893858 | 4.25E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene82939 | 0.890531 | 9.06E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene82939 | 0.820008 | 8.61E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene82939 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene059807 | MS.gene82939 | 0.834709 | 2.56E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene82939 | 0.895127 | 1.29E-75 | -1.69E-46 |
| MS.gene059894 | MS.gene82939 | 0.905964 | 2.46E-80 | -1.69E-46 |
| MS.gene059899 | MS.gene82939 | 0.873429 | 1.48E-67 | -1.69E-46 |
| MS.gene060083 | MS.gene82939 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene82939 | 0.849755 | 2.64E-60 | -1.69E-46 |
| MS.gene06037 | MS.gene82939 | 0.831692 | 1.45E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene82939 | 0.850072 | 2.15E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene82939 | 0.875103 | 4.01E-68 | -1.69E-46 |
| MS.gene060495 | MS.gene82939 | 0.848965 | 4.38E-60 | -1.69E-46 |
| MS.gene060496 | MS.gene82939 | 0.810789 | 9.68E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene82939 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene82939 | 0.812654 | 3.80E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene82939 | 0.816812 | 4.56E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene82939 | 0.929967 | 3.24E-93 | -1.69E-46 |
| MS.gene061051 | MS.gene82939 | -0.870852 | 1.07E-66 | -1.69E-46 |
| MS.gene061112 | MS.gene82939 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene82939 | -0.814242 | 1.70E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene82939 | 0.866382 | 2.97E-65 | -1.69E-46 |
| MS.gene061159 | MS.gene82939 | 0.879821 | 9.11E-70 | -1.69E-46 |
| MS.gene061265 | MS.gene82939 | 0.815717 | 8.01E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCCATGTAAGCTTTAA+TGG | 0.159444 | 6.2:-2611044 | None:intergenic |
| TCTCAAAACTGAGGAGATTT+TGG | 0.193705 | 6.2:+2613471 | MS.gene82939:CDS |
| ACAACATTTGAAAATGAGTT+TGG | 0.277068 | 6.2:-2611067 | None:intergenic |
| AATGTTGTTAGCAAAGTTAT+TGG | 0.287367 | 6.2:+2611082 | MS.gene82939:CDS |
| GCGATCTACGTTTGTTGCTT+TGG | 0.320704 | 6.2:+2614020 | MS.gene82939:CDS |
| TCTATGTTCTTCTATGTTGT+TGG | 0.335692 | 6.2:+2613425 | MS.gene82939:CDS |
| TGTTGTTGGCTAGCAGCTAT+TGG | 0.362293 | 6.2:+2613439 | MS.gene82939:CDS |
| TTGAAGTTTGTTGTTTCGTT+TGG | 0.365241 | 6.2:-2611003 | None:intergenic |
| ATTGGTGCTCTTCCTGTTGT+TGG | 0.376523 | 6.2:+2611100 | MS.gene82939:CDS |
| TAGAGAAGGGCAAGACAAAA+AGG | 0.394828 | 6.2:+2613948 | MS.gene82939:intron |
| TCAACAGCTTCCTTTGATAG+AGG | 0.406723 | 6.2:-2614200 | None:intergenic |
| CTCTCATCTTCTGTCTCTAT+AGG | 0.411361 | 6.2:-2614050 | None:intergenic |
| GATAGAGGCTTAGCAGCATC+TGG | 0.416100 | 6.2:-2614185 | None:intergenic |
| TTCTCGACTCGAACCTCCAT+TGG | 0.422859 | 6.2:-2613987 | None:intergenic |
| TTTAATGGTGAAATTTGTAG+TGG | 0.432350 | 6.2:-2611029 | None:intergenic |
| TTTCACCATTAAAGCTTACA+TGG | 0.460009 | 6.2:+2611039 | MS.gene82939:CDS |
| GCTAGGATTATGAGTGATGA+AGG | 0.474789 | 6.2:+2611130 | MS.gene82939:CDS |
| TGGCTAGCAGCTATTGGTGC+AGG | 0.478681 | 6.2:+2613445 | MS.gene82939:CDS |
| TGCACCTCCTGCTGTTCCAA+TGG | 0.495391 | 6.2:+2613971 | MS.gene82939:CDS |
| CTCTCTTGCTTCATCCATCA+TGG | 0.504937 | 6.2:-2613554 | None:intergenic |
| CTACGTTTGTTGCTTTGGAA+AGG | 0.505103 | 6.2:+2614025 | MS.gene82939:CDS |
| AAAAGTAGAAGACGGAGGTA+TGG | 0.509469 | 6.2:+2614154 | MS.gene82939:CDS |
| ATGAGTGATGAAGGTGGTGT+TGG | 0.509665 | 6.2:+2611139 | MS.gene82939:CDS |
| CTAGCTAAAAGACCAACAAC+AGG | 0.516749 | 6.2:-2611112 | None:intergenic |
| CGAACCTCCATTGGAACAGC+AGG | 0.523861 | 6.2:-2613978 | None:intergenic |
| GCTGAGTTTAGAAGAAGGGT+TGG | 0.525341 | 6.2:+2611181 | MS.gene82939:CDS |
| ACCTCCTGCTGTTCCAATGG+AGG | 0.539080 | 6.2:+2613974 | MS.gene82939:CDS |
| TATCAGTTTCAAGCAAGAAG+AGG | 0.555632 | 6.2:+2611238 | MS.gene82939:CDS |
| CCGACGCATGGTTAAAGAGA+TGG | 0.562583 | 6.2:+2614127 | MS.gene82939:CDS |
| AGTTTCAAGCAAGAAGAGGA+AGG | 0.571685 | 6.2:+2611242 | MS.gene82939:CDS |
| TGCTGCTAAGCCTCTATCAA+AGG | 0.573332 | 6.2:+2614190 | MS.gene82939:CDS |
| CAACATAGAAGAACATAGAT+CGG | 0.585074 | 6.2:-2613421 | None:intergenic |
| TTAATGGTGAAATTTGTAGT+GGG | 0.585415 | 6.2:-2611028 | None:intergenic |
| GTTTCGTTTGGTGATGAACA+TGG | 0.588051 | 6.2:-2610991 | None:intergenic |
| ACCTCCATTGGAACAGCAGG+AGG | 0.594571 | 6.2:-2613975 | None:intergenic |
| ACAGACTTTCATAGCCATGA+TGG | 0.596549 | 6.2:+2613540 | MS.gene82939:CDS |
| GTTTCAAGCAAGAAGAGGAA+GGG | 0.598303 | 6.2:+2611243 | MS.gene82939:CDS |
| CCATCTCTTTAACCATGCGT+CGG | 0.598906 | 6.2:-2614127 | None:intergenic |
| TTTGGTGATGAACATGGTGA+TGG | 0.601757 | 6.2:-2610985 | None:intergenic |
| CATGATGGATGAAGCAAGAG+AGG | 0.615451 | 6.2:+2613555 | MS.gene82939:CDS |
| CTATAGAGACAGAAGATGAG+AGG | 0.617615 | 6.2:+2614051 | MS.gene82939:CDS |
| AAAACAAGAGATCCGACGCA+TGG | 0.634308 | 6.2:+2614115 | MS.gene82939:CDS |
| TGCAGGTCTTCTCAAAACTG+AGG | 0.678847 | 6.2:+2613462 | MS.gene82939:CDS |
| AGGATTATGAGTGATGAAGG+TGG | 0.737229 | 6.2:+2611133 | MS.gene82939:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGCAAAATTTAATAAA+AGG | - | chr6.2:2611291-2611310 | None:intergenic | 10.0% |
| !! | AAATGCAAAATTTAATAAAA+GGG | - | chr6.2:2611290-2611309 | None:intergenic | 10.0% |
| !!! | TTATTAAATTTTGCATTTTT+TGG | + | chr6.2:2611292-2611311 | MS.gene82939:intron | 10.0% |
| !! | AAACTATTTCAAGAATAAAA+AGG | - | chr6.2:2613289-2613308 | None:intergenic | 15.0% |
| !! | AAGTTAAATATACTTAAATG+AGG | + | chr6.2:2613072-2613091 | MS.gene82939:intron | 15.0% |
| !! | CTTATAAAATTAGAGTTTAA+TGG | - | chr6.2:2611763-2611782 | None:intergenic | 15.0% |
| !!! | CATTAAACTCTAATTTTATA+AGG | + | chr6.2:2611761-2611780 | MS.gene82939:intron | 15.0% |
| !!! | CATTTTCTCATAAAATAATA+AGG | - | chr6.2:2611579-2611598 | None:intergenic | 15.0% |
| !! | ATTTGATTAAGGTTAGAATT+TGG | + | chr6.2:2612514-2612533 | MS.gene82939:intron | 20.0% |
| !! | CTAACCTTAATCAAATTATA+AGG | - | chr6.2:2612510-2612529 | None:intergenic | 20.0% |
| !! | TCATTTCTCATAAAATAACA+AGG | - | chr6.2:2611381-2611400 | None:intergenic | 20.0% |
| !! | TGTAAGTGTATAATTGATTA+TGG | - | chr6.2:2612041-2612060 | None:intergenic | 20.0% |
| !! | TGTTGTAATCTATACTTAAA+TGG | + | chr6.2:2611677-2611696 | MS.gene82939:intron | 20.0% |
| !! | TTTATGTGCTAAAATAGAAA+TGG | + | chr6.2:2613330-2613349 | MS.gene82939:intron | 20.0% |
| !!! | AAAGCCTTATAATTTGATTA+AGG | + | chr6.2:2612503-2612522 | MS.gene82939:intron | 20.0% |
| !!! | AAGATGCAAAATTTGAAATT+GGG | - | chr6.2:2612562-2612581 | None:intergenic | 20.0% |
| !!! | AATTTCAAATTTTGCATCTT+GGG | + | chr6.2:2612562-2612581 | MS.gene82939:intron | 20.0% |
| !!! | ATAAGGTAATTTTGCATTTT+GGG | + | chr6.2:2611778-2611797 | MS.gene82939:intron | 20.0% |
| !!! | GCTATTTTTATAACAAACAA+AGG | - | chr6.2:2613821-2613840 | None:intergenic | 20.0% |
| !!! | TACACTTACATAATCTATTT+TGG | + | chr6.2:2612051-2612070 | MS.gene82939:intron | 20.0% |
| !!! | TATAAGGTAATTTTGCATTT+TGG | + | chr6.2:2611777-2611796 | MS.gene82939:intron | 20.0% |
| !!! | TATTCTTGAAATAGTTTTTG+TGG | + | chr6.2:2613292-2613311 | MS.gene82939:intron | 20.0% |
| !!! | TATTTTGTTTGAGAAAGTTA+AGG | - | chr6.2:2614241-2614260 | None:intergenic | 20.0% |
| !!! | TTGATAAATGTTGCATTTTT+TGG | + | chr6.2:2611489-2611508 | MS.gene82939:intron | 20.0% |
| ! | AAAACAGAAAATATATCCGA+AGG | - | chr6.2:2612724-2612743 | None:intergenic | 25.0% |
| ! | AAATTGAATAAGGGAAGAAA+TGG | - | chr6.2:2612938-2612957 | None:intergenic | 25.0% |
| ! | AAGAACACAAGATTTATCAA+GGG | - | chr6.2:2612909-2612928 | None:intergenic | 25.0% |
| ! | AAGATTCATATTTGATTGTG+GGG | - | chr6.2:2613163-2613182 | None:intergenic | 25.0% |
| ! | AATAGTTTGATACCTAAATG+AGG | + | chr6.2:2612590-2612609 | MS.gene82939:intron | 25.0% |
| ! | AATATCAACCATAATCAACA+GGG | - | chr6.2:2612208-2612227 | None:intergenic | 25.0% |
| ! | AATGCAACATTACACTAAAA+CGG | - | chr6.2:2613606-2613625 | None:intergenic | 25.0% |
| ! | AATGTTGTTAGCAAAGTTAT+TGG | + | chr6.2:2611082-2611101 | MS.gene82939:CDS | 25.0% |
| ! | ACAACATTTGAAAATGAGTT+TGG | - | chr6.2:2611070-2611089 | None:intergenic | 25.0% |
| ! | ATAATTGATTATGGCATGTT+TGG | - | chr6.2:2612032-2612051 | None:intergenic | 25.0% |
| ! | ATTAACCTTCATTCATTGTA+AGG | - | chr6.2:2613252-2613271 | None:intergenic | 25.0% |
| ! | CAAGATTCATATTTGATTGT+GGG | - | chr6.2:2613164-2613183 | None:intergenic | 25.0% |
| ! | CAATTGCAGAAATTGAATAA+GGG | - | chr6.2:2612947-2612966 | None:intergenic | 25.0% |
| ! | CATTGCTTTCAAATTCTTAA+CGG | + | chr6.2:2612993-2613012 | MS.gene82939:intron | 25.0% |
| ! | GCAACATTTATCAAATCATA+AGG | - | chr6.2:2611483-2611502 | None:intergenic | 25.0% |
| ! | GCTTCAAGTATAATCAATTA+TGG | + | chr6.2:2611978-2611997 | MS.gene82939:intron | 25.0% |
| ! | GTAACTGAATATGATAGAAT+TGG | + | chr6.2:2612769-2612788 | MS.gene82939:intron | 25.0% |
| ! | TCAAGTATAATCAATTATGG+TGG | + | chr6.2:2611981-2612000 | MS.gene82939:intron | 25.0% |
| ! | TGTAACCTTATAATCGATTA+AGG | + | chr6.2:2612640-2612659 | MS.gene82939:intron | 25.0% |
| ! | TTAATGGTGAAATTTGTAGT+GGG | - | chr6.2:2611031-2611050 | None:intergenic | 25.0% |
| ! | TTCTAGTAAGTAGTGATTTA+TGG | - | chr6.2:2612365-2612384 | None:intergenic | 25.0% |
| ! | TTTAATGGTGAAATTTGTAG+TGG | - | chr6.2:2611032-2611051 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTTTATCTAC+TGG | + | chr6.2:2613663-2613682 | MS.gene82939:intron | 25.0% |
| !! | AGATGCAAAATTTGAAATTG+GGG | - | chr6.2:2612561-2612580 | None:intergenic | 25.0% |
| !! | CAAGATGCAAAATTTGAAAT+TGG | - | chr6.2:2612563-2612582 | None:intergenic | 25.0% |
| !! | CAATTTCAAATTTTGCATCT+TGG | + | chr6.2:2612561-2612580 | MS.gene82939:intron | 25.0% |
| !! | TGATTTGTAATAGTTACCTT+CGG | + | chr6.2:2612705-2612724 | MS.gene82939:intron | 25.0% |
| !! | TTCGGATATATTTTCTGTTT+TGG | + | chr6.2:2612723-2612742 | MS.gene82939:intron | 25.0% |
| !!! | AATTTTTCAGTTGTCAGAAT+AGG | - | chr6.2:2613914-2613933 | None:intergenic | 25.0% |
| !!! | GAATATGATAGAATTGGTTT+TGG | + | chr6.2:2612775-2612794 | MS.gene82939:intron | 25.0% |
| !!! | TAGTTATTTTTTGACTTGTG+AGG | + | chr6.2:2611519-2611538 | MS.gene82939:intron | 25.0% |
| !!! | TCACAATAGCTTTACATTTT+AGG | - | chr6.2:2612688-2612707 | None:intergenic | 25.0% |
| !!! | TGATTTTGTAAAGTTGATTC+TGG | + | chr6.2:2611840-2611859 | MS.gene82939:intron | 25.0% |
| AAATAAGGGGAAAACAGATT+AGG | - | chr6.2:2613730-2613749 | None:intergenic | 30.0% | |
| AACATGAAATTAACCTCAAG+AGG | - | chr6.2:2611441-2611460 | None:intergenic | 30.0% | |
| AATAAGGGAAGAAATGGAAA+GGG | - | chr6.2:2612932-2612951 | None:intergenic | 30.0% | |
| AATGCAAAGTGAGTTATGTT+TGG | + | chr6.2:2611877-2611896 | MS.gene82939:intron | 30.0% | |
| ACCTTAATCTGACAACTATA+AGG | - | chr6.2:2612157-2612176 | None:intergenic | 30.0% | |
| ACCTTATAATCGATTAAGGT+TGG | + | chr6.2:2612644-2612663 | MS.gene82939:intron | 30.0% | |
| ACCTTATAGTTGTCAGATTA+AGG | + | chr6.2:2612153-2612172 | MS.gene82939:intron | 30.0% | |
| ATAAGTCACAAGTGTATGTT+TGG | - | chr6.2:2612094-2612113 | None:intergenic | 30.0% | |
| ATGATGCAAAATTAGATCCT+AGG | - | chr6.2:2613041-2613060 | None:intergenic | 30.0% | |
| ATGTGCTAAAATAGAAATGG+AGG | + | chr6.2:2613333-2613352 | MS.gene82939:intron | 30.0% | |
| CAACATAGAAGAACATAGAT+CGG | - | chr6.2:2613424-2613443 | None:intergenic | 30.0% | |
| CCAAGATTCATATTTGATTG+TGG | - | chr6.2:2613165-2613184 | None:intergenic | 30.0% | |
| CCAATTGCAGAAATTGAATA+AGG | - | chr6.2:2612948-2612967 | None:intergenic | 30.0% | |
| CCACAATCAAATATGAATCT+TGG | + | chr6.2:2613162-2613181 | MS.gene82939:intron | 30.0% | |
| CCTTATTCAATTTCTGCAAT+TGG | + | chr6.2:2612945-2612964 | MS.gene82939:intron | 30.0% | |
| GAAGAACACAAGATTTATCA+AGG | - | chr6.2:2612910-2612929 | None:intergenic | 30.0% | |
| GAATATCAACCATAATCAAC+AGG | - | chr6.2:2612209-2612228 | None:intergenic | 30.0% | |
| GATGTGAATTTATTGGATGA+TGG | + | chr6.2:2611706-2611725 | MS.gene82939:intron | 30.0% | |
| GCAAGATGATGTGAATTTAT+TGG | + | chr6.2:2611699-2611718 | MS.gene82939:intron | 30.0% | |
| TCCAATTGGAAATGAGAATT+GGG | + | chr6.2:2611636-2611655 | MS.gene82939:intron | 30.0% | |
| TCTATGTTCTTCTATGTTGT+TGG | + | chr6.2:2613425-2613444 | MS.gene82939:CDS | 30.0% | |
| TGATGCAAAATTAGATCCTA+GGG | - | chr6.2:2613040-2613059 | None:intergenic | 30.0% | |
| TTGAAAGCAATGATGAAAAC+TGG | - | chr6.2:2612985-2613004 | None:intergenic | 30.0% | |
| TTTCACCATTAAAGCTTACA+TGG | + | chr6.2:2611039-2611058 | MS.gene82939:CDS | 30.0% | |
| ! | AAAATTTGAAATTGGGGTAG+TGG | - | chr6.2:2612555-2612574 | None:intergenic | 30.0% |
| ! | AGGATCTAATTTTGCATCAT+AGG | + | chr6.2:2613041-2613060 | MS.gene82939:intron | 30.0% |
| ! | ATTCTCCATGTAAGCTTTAA+TGG | - | chr6.2:2611047-2611066 | None:intergenic | 30.0% |
| ! | ATTTTGCTGAGTTTAGAAGA+AGG | + | chr6.2:2611176-2611195 | MS.gene82939:CDS | 30.0% |
| ! | GAAAGATTGAATTTTGAGCA+AGG | - | chr6.2:2612480-2612499 | None:intergenic | 30.0% |
| ! | GGTTGATATTCTCTAATAAG+TGG | + | chr6.2:2612218-2612237 | MS.gene82939:intron | 30.0% |
| ! | GTTACAATTTTTACCTCTTG+AGG | + | chr6.2:2611425-2611444 | MS.gene82939:intron | 30.0% |
| ! | TGGATAGCTTGTGAAAATAA+GGG | - | chr6.2:2613744-2613763 | None:intergenic | 30.0% |
| ! | TTGCATTTTGTAGATATTCC+TGG | + | chr6.2:2613619-2613638 | MS.gene82939:intron | 30.0% |
| ! | TTGGATAGCTTGTGAAAATA+AGG | - | chr6.2:2613745-2613764 | None:intergenic | 30.0% |
| ! | TTTTGCTGAGTTTAGAAGAA+GGG | + | chr6.2:2611177-2611196 | MS.gene82939:CDS | 30.0% |
| !! | ATGTTTGGTTTCACTTTTAG+AGG | - | chr6.2:2612079-2612098 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAACTATCT+TGG | - | chr6.2:2613764-2613783 | None:intergenic | 30.0% |
| !! | GGTGTTAATTTGTTGTATGT+AGG | + | chr6.2:2613378-2613397 | MS.gene82939:intron | 30.0% |
| !! | TAATTTGTTGTATGTAGGCA+GGG | + | chr6.2:2613383-2613402 | MS.gene82939:intron | 30.0% |
| !! | TAGTTTTACACATGTCCAAT+TGG | + | chr6.2:2611622-2611641 | MS.gene82939:intron | 30.0% |
| !! | TGTTTGGTTTCACTTTTAGA+GGG | - | chr6.2:2612078-2612097 | None:intergenic | 30.0% |
| !! | TTAATTTGTTGTATGTAGGC+AGG | + | chr6.2:2613382-2613401 | MS.gene82939:intron | 30.0% |
| !! | TTGAAGTTTGTTGTTTCGTT+TGG | - | chr6.2:2611006-2611025 | None:intergenic | 30.0% |
| !!! | ATATTTTCTGTTTTGGCAGT+TGG | + | chr6.2:2612730-2612749 | MS.gene82939:intron | 30.0% |
| !!! | ATCTCTTGTTTTTGAACTGA+TGG | - | chr6.2:2614107-2614126 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTGGTAGCTATAT+AGG | + | chr6.2:2612787-2612806 | MS.gene82939:intron | 30.0% |
| !!! | CTTTTTTTTACTTGTGAGGT+TGG | + | chr6.2:2611327-2611346 | MS.gene82939:intron | 30.0% |
| !!! | GTTGCTTTTTTTTACTTGTG+AGG | + | chr6.2:2611323-2611342 | MS.gene82939:intron | 30.0% |
| !!! | TATTTTTTGACTTGTGAGGT+TGG | + | chr6.2:2611523-2611542 | MS.gene82939:intron | 30.0% |
| AACAGATTAGGACAACTCAT+AGG | - | chr6.2:2613718-2613737 | None:intergenic | 35.0% | |
| AATCGATTAAGGTTGGCATA+TGG | + | chr6.2:2612651-2612670 | MS.gene82939:intron | 35.0% | |
| ACCCAATTCTCATTTCCAAT+TGG | - | chr6.2:2611640-2611659 | None:intergenic | 35.0% | |
| AGAAATCAAGTGAGCATTAG+AGG | + | chr6.2:2612843-2612862 | MS.gene82939:intron | 35.0% | |
| AGTGACTTGAGCAACAAATT+TGG | + | chr6.2:2611915-2611934 | MS.gene82939:intron | 35.0% | |
| AGTTTATCTACTGGCATTAG+TGG | + | chr6.2:2613672-2613691 | MS.gene82939:intron | 35.0% | |
| ATGGCAGAAAAAGTAGAAGA+CGG | + | chr6.2:2614146-2614165 | MS.gene82939:CDS | 35.0% | |
| ATGTTGACCACTATAGAGAA+GGG | + | chr6.2:2613935-2613954 | MS.gene82939:intron | 35.0% | |
| ATTCATATTTGATTGTGGGG+TGG | - | chr6.2:2613160-2613179 | None:intergenic | 35.0% | |
| ATTGATACCCAACTAACGAA+TGG | - | chr6.2:2612245-2612264 | None:intergenic | 35.0% | |
| CCTAACCTTACAATGAATGA+AGG | + | chr6.2:2613244-2613263 | MS.gene82939:intron | 35.0% | |
| CCTTCATTCATTGTAAGGTT+AGG | - | chr6.2:2613247-2613266 | None:intergenic | 35.0% | |
| CGACTATTGATCATAGAGTT+CGG | - | chr6.2:2612432-2612451 | None:intergenic | 35.0% | |
| GAAATCAAGTGAGCATTAGA+GGG | + | chr6.2:2612844-2612863 | MS.gene82939:intron | 35.0% | |
| GAATAAGGGAAGAAATGGAA+AGG | - | chr6.2:2612933-2612952 | None:intergenic | 35.0% | |
| GCATGAAATCAACCTCATTT+AGG | - | chr6.2:2612605-2612624 | None:intergenic | 35.0% | |
| GCCAACCTTAATCGATTATA+AGG | - | chr6.2:2612648-2612667 | None:intergenic | 35.0% | |
| GGTATCAATTAGGAAGGTTA+GGG | + | chr6.2:2612256-2612275 | MS.gene82939:intron | 35.0% | |
| GTATCAATTAGGAAGGTTAG+GGG | + | chr6.2:2612257-2612276 | MS.gene82939:intron | 35.0% | |
| GTCCAATTGGAAATGAGAAT+TGG | + | chr6.2:2611635-2611654 | MS.gene82939:intron | 35.0% | |
| GTGACTTGAGCAACAAATTT+GGG | + | chr6.2:2611916-2611935 | MS.gene82939:intron | 35.0% | |
| TAGTTGGGTATCAATTAGGA+AGG | + | chr6.2:2612250-2612269 | MS.gene82939:intron | 35.0% | |
| TATCAGTTTCAAGCAAGAAG+AGG | + | chr6.2:2611238-2611257 | MS.gene82939:CDS | 35.0% | |
| TATGTTGACCACTATAGAGA+AGG | + | chr6.2:2613934-2613953 | MS.gene82939:intron | 35.0% | |
| TCGTTAGTTGGGTATCAATT+AGG | + | chr6.2:2612246-2612265 | MS.gene82939:intron | 35.0% | |
| TGATCATGAAAACACTCACA+AGG | - | chr6.2:2612818-2612837 | None:intergenic | 35.0% | |
| TTCAGGGTAAACTTGTAAAC+TGG | + | chr6.2:2612305-2612324 | MS.gene82939:intron | 35.0% | |
| ! | AAAACTGAGGAGATTTTGGA+AGG | + | chr6.2:2613475-2613494 | MS.gene82939:CDS | 35.0% |
| ! | GGATAGCTTGTGAAAATAAG+GGG | - | chr6.2:2613743-2613762 | None:intergenic | 35.0% |
| ! | TCTCAAAACTGAGGAGATTT+TGG | + | chr6.2:2613471-2613490 | MS.gene82939:CDS | 35.0% |
| ! | TGTAGATATTCCTGGTCTTT+CGG | + | chr6.2:2613627-2613646 | MS.gene82939:intron | 35.0% |
| ! | TGTGAGTGTTTTCATGATCA+CGG | + | chr6.2:2612818-2612837 | MS.gene82939:intron | 35.0% |
| !! | AATTTGTTGTATGTAGGCAG+GGG | + | chr6.2:2613384-2613403 | MS.gene82939:intron | 35.0% |
| !!! | GGTTTTCTAAAGTGCATGTT+TGG | + | chr6.2:2611799-2611818 | MS.gene82939:intron | 35.0% |
| AAAAGTAGAAGACGGAGGTA+TGG | + | chr6.2:2614154-2614173 | MS.gene82939:CDS | 40.0% | |
| AACGGAGTAACTTTCAGAGA+TGG | - | chr6.2:2613588-2613607 | None:intergenic | 40.0% | |
| AAGTGGTCCATTCGTTAGTT+GGG | + | chr6.2:2612235-2612254 | MS.gene82939:intron | 40.0% | |
| ACAGACTTTCATAGCCATGA+TGG | + | chr6.2:2613540-2613559 | MS.gene82939:CDS | 40.0% | |
| AGGATTATGAGTGATGAAGG+TGG | + | chr6.2:2611133-2611152 | MS.gene82939:CDS | 40.0% | |
| AGTTTCAAGCAAGAAGAGGA+AGG | + | chr6.2:2611242-2611261 | MS.gene82939:CDS | 40.0% | |
| ATCAACCATAATCAACAGGG+TGG | - | chr6.2:2612205-2612224 | None:intergenic | 40.0% | |
| CACTCTACTGTAAGAGACAT+AGG | + | chr6.2:2612397-2612416 | MS.gene82939:intron | 40.0% | |
| CTAGCTAAAAGACCAACAAC+AGG | - | chr6.2:2611115-2611134 | None:intergenic | 40.0% | |
| CTATAGAGACAGAAGATGAG+AGG | + | chr6.2:2614051-2614070 | MS.gene82939:CDS | 40.0% | |
| CTCTCATCTTCTGTCTCTAT+AGG | - | chr6.2:2614053-2614072 | None:intergenic | 40.0% | |
| GCTAGGATTATGAGTGATGA+AGG | + | chr6.2:2611130-2611149 | MS.gene82939:CDS | 40.0% | |
| GGGTATCAATTAGGAAGGTT+AGG | + | chr6.2:2612255-2612274 | MS.gene82939:intron | 40.0% | |
| GTATGAATGCGTGTCTAACT+TGG | + | chr6.2:2613357-2613376 | MS.gene82939:intron | 40.0% | |
| GTTTACCCTGAATCATTCCA+CGG | - | chr6.2:2612297-2612316 | None:intergenic | 40.0% | |
| GTTTCAAGCAAGAAGAGGAA+GGG | + | chr6.2:2611243-2611262 | MS.gene82939:CDS | 40.0% | |
| TAAGTGGTCCATTCGTTAGT+TGG | + | chr6.2:2612234-2612253 | MS.gene82939:intron | 40.0% | |
| TAGAGAAGGGCAAGACAAAA+AGG | + | chr6.2:2613948-2613967 | MS.gene82939:intron | 40.0% | |
| TCAACAGCTTCCTTTGATAG+AGG | - | chr6.2:2614203-2614222 | None:intergenic | 40.0% | |
| TGCAAAATTAGATCCTAGGG+TGG | - | chr6.2:2613037-2613056 | None:intergenic | 40.0% | |
| TTAAGGTTGGCATATGGCAA+TGG | + | chr6.2:2612657-2612676 | MS.gene82939:intron | 40.0% | |
| TTAGTGGTTGTGAAACTCCT+TGG | + | chr6.2:2613688-2613707 | MS.gene82939:intron | 40.0% | |
| TTTACCCTGAATCATTCCAC+GGG | - | chr6.2:2612296-2612315 | None:intergenic | 40.0% | |
| ! | GTTTAATGGACGTGCAATCA+CGG | - | chr6.2:2611749-2611768 | None:intergenic | 40.0% |
| !! | CTACGTTTGTTGCTTTGGAA+AGG | + | chr6.2:2614025-2614044 | MS.gene82939:CDS | 40.0% |
| !! | GTTTCGTTTGGTGATGAACA+TGG | - | chr6.2:2610994-2611013 | None:intergenic | 40.0% |
| !! | TTTGGTGATGAACATGGTGA+TGG | - | chr6.2:2610988-2611007 | None:intergenic | 40.0% |
| !!! | CTGTTGTTGGTCTTTTAGCT+AGG | + | chr6.2:2611113-2611132 | MS.gene82939:CDS | 40.0% |
| !!! | TTTTCTGTTTTGGCAGTTGG+TGG | + | chr6.2:2612733-2612752 | MS.gene82939:intron | 40.0% |
| AAAACAAGAGATCCGACGCA+TGG | + | chr6.2:2614115-2614134 | MS.gene82939:CDS | 45.0% | |
| AAACCCCGTGGAATGATTCA+GGG | + | chr6.2:2612289-2612308 | MS.gene82939:intron | 45.0% | |
| AATTAGGAAGGTTAGGGGTC+CGG | + | chr6.2:2612262-2612281 | MS.gene82939:intron | 45.0% | |
| ATGAGTGATGAAGGTGGTGT+TGG | + | chr6.2:2611139-2611158 | MS.gene82939:CDS | 45.0% | |
| ATGGATGAAGCAAGAGAGGT+TGG | + | chr6.2:2613559-2613578 | MS.gene82939:intron | 45.0% | |
| ATTTATGTAGCGACCACCCT+AGG | + | chr6.2:2613021-2613040 | MS.gene82939:intron | 45.0% | |
| CCATCTCTTTAACCATGCGT+CGG | - | chr6.2:2614130-2614149 | None:intergenic | 45.0% | |
| CTCTCTTGCTTCATCCATCA+TGG | - | chr6.2:2613557-2613576 | None:intergenic | 45.0% | |
| GACAACTCATAGGTTCTCCA+AGG | - | chr6.2:2613708-2613727 | None:intergenic | 45.0% | |
| GCAGAAAAAGTAGAAGACGG+AGG | + | chr6.2:2614149-2614168 | MS.gene82939:CDS | 45.0% | |
| GCTGAGTTTAGAAGAAGGGT+TGG | + | chr6.2:2611181-2611200 | MS.gene82939:CDS | 45.0% | |
| GTAAGAGACATAGGCACAGT+TGG | + | chr6.2:2612406-2612425 | MS.gene82939:intron | 45.0% | |
| TCCAAACAAACCGAAAGACC+AGG | - | chr6.2:2613640-2613659 | None:intergenic | 45.0% | |
| TGCAGGTCTTCTCAAAACTG+AGG | + | chr6.2:2613462-2613481 | MS.gene82939:CDS | 45.0% | |
| TGCTGCTAAGCCTCTATCAA+AGG | + | chr6.2:2614190-2614209 | MS.gene82939:CDS | 45.0% | |
| TGTCTTGCCCTTCTCTATAG+TGG | - | chr6.2:2613945-2613964 | None:intergenic | 45.0% | |
| TTACCCTGAATCATTCCACG+GGG | - | chr6.2:2612295-2612314 | None:intergenic | 45.0% | |
| ! | ATTGGTGCTCTTCCTGTTGT+TGG | + | chr6.2:2611100-2611119 | MS.gene82939:CDS | 45.0% |
| ! | GCGATCTACGTTTGTTGCTT+TGG | + | chr6.2:2614020-2614039 | MS.gene82939:CDS | 45.0% |
| ! | TCCTGGTCTTTCGGTTTGTT+TGG | + | chr6.2:2613636-2613655 | MS.gene82939:intron | 45.0% |
| ! | TGTTGTTGGCTAGCAGCTAT+TGG | + | chr6.2:2613439-2613458 | MS.gene82939:CDS | 45.0% |
| !! | AGATTTTGGAAGGAGTCGGA+AGG | + | chr6.2:2613485-2613504 | MS.gene82939:CDS | 45.0% |
| !! | CATGATGGATGAAGCAAGAG+AGG | + | chr6.2:2613555-2613574 | MS.gene82939:CDS | 45.0% |
| !! | GAGGAGATTTTGGAAGGAGT+CGG | + | chr6.2:2613481-2613500 | MS.gene82939:CDS | 45.0% |
| ATTAGAGGGATCTCTCGAGC+TGG | + | chr6.2:2612858-2612877 | MS.gene82939:intron | 50.0% | |
| ATTAGGAAGGTTAGGGGTCC+GGG | + | chr6.2:2612263-2612282 | MS.gene82939:intron | 50.0% | |
| CCGACGCATGGTTAAAGAGA+TGG | + | chr6.2:2614127-2614146 | MS.gene82939:CDS | 50.0% | |
| GAAACCCCGTGGAATGATTC+AGG | + | chr6.2:2612288-2612307 | MS.gene82939:intron | 50.0% | |
| GATAGAGGCTTAGCAGCATC+TGG | - | chr6.2:2614188-2614207 | None:intergenic | 50.0% | |
| TTAGAGGGATCTCTCGAGCT+GGG | + | chr6.2:2612859-2612878 | MS.gene82939:intron | 50.0% | |
| ! | AGCTGCCACCCTGTTGATTA+TGG | + | chr6.2:2612197-2612216 | MS.gene82939:intron | 50.0% |
| ! | TTCTCGACTCGAACCTCCAT+TGG | - | chr6.2:2613990-2614009 | None:intergenic | 50.0% |
| AAGGGTCACAGCAGAGTTGC+AGG | - | chr6.2:2612891-2612910 | None:intergenic | 55.0% | |
| ACCTCCATTGGAACAGCAGG+AGG | - | chr6.2:2613978-2613997 | None:intergenic | 55.0% | |
| ACCTCCTGCTGTTCCAATGG+AGG | + | chr6.2:2613974-2613993 | MS.gene82939:CDS | 55.0% | |
| CGAACCTCCATTGGAACAGC+AGG | - | chr6.2:2613981-2614000 | None:intergenic | 55.0% | |
| TGCACCTCCTGCTGTTCCAA+TGG | + | chr6.2:2613971-2613990 | MS.gene82939:CDS | 55.0% | |
| TGGCTAGCAGCTATTGGTGC+AGG | + | chr6.2:2613445-2613464 | MS.gene82939:CDS | 55.0% | |
| TTAGGAAGGTTAGGGGTCCG+GGG | + | chr6.2:2612264-2612283 | MS.gene82939:intron | 55.0% | |
| TTGTATGTAGGCAGGGGACC+AGG | + | chr6.2:2613390-2613409 | MS.gene82939:intron | 55.0% | |
| CATAGATCGGATCCCCTGCC+TGG | - | chr6.2:2613411-2613430 | None:intergenic | 60.0% | |
| CATTCCACGGGGTTTCACCC+CGG | - | chr6.2:2612284-2612303 | None:intergenic | 60.0% | |
| ATGTAGGCAGGGGACCAGGC+AGG | + | chr6.2:2613394-2613413 | MS.gene82939:intron | 65.0% | |
| TGTAGGCAGGGGACCAGGCA+GGG | + | chr6.2:2613395-2613414 | MS.gene82939:intron | 65.0% | |
| GTAGGCAGGGGACCAGGCAG+GGG | + | chr6.2:2613396-2613415 | MS.gene82939:intron | 70.0% | |
| GGGTCCGGGGTGAAACCCCG+TGG | + | chr6.2:2612277-2612296 | MS.gene82939:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 2610985 | 2614271 | 2610985 | ID=MS.gene82939 |
| chr6.2 | mRNA | 2610985 | 2614271 | 2610985 | ID=MS.gene82939.t1;Parent=MS.gene82939 |
| chr6.2 | exon | 2610985 | 2611264 | 2610985 | ID=MS.gene82939.t1.exon1;Parent=MS.gene82939.t1 |
| chr6.2 | CDS | 2610985 | 2611264 | 2610985 | ID=cds.MS.gene82939.t1;Parent=MS.gene82939.t1 |
| chr6.2 | exon | 2613412 | 2613576 | 2613412 | ID=MS.gene82939.t1.exon2;Parent=MS.gene82939.t1 |
| chr6.2 | CDS | 2613412 | 2613576 | 2613412 | ID=cds.MS.gene82939.t1;Parent=MS.gene82939.t1 |
| chr6.2 | exon | 2613951 | 2614271 | 2613951 | ID=MS.gene82939.t1.exon3;Parent=MS.gene82939.t1 |
| chr6.2 | CDS | 2613951 | 2614271 | 2613951 | ID=cds.MS.gene82939.t1;Parent=MS.gene82939.t1 |
| Gene Sequence |
| Protein sequence |
