Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34191.t1 | XP_013450807.1 | 99.1 | 116 | 1 | 0 | 1 | 116 | 79 | 194 | 1.60E-57 | 231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34191.t1 | Q9M3C6 | 73.3 | 116 | 27 | 1 | 1 | 116 | 60 | 171 | 8.6e-44 | 177.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34191.t1 | A0A072U5C5 | 99.1 | 116 | 1 | 0 | 1 | 116 | 79 | 194 | 1.2e-57 | 231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene34191 | 0.807321 | 5.35E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene34191 | 0.848716 | 5.13E-60 | -1.69E-46 |
| MS.gene049151 | MS.gene34191 | 0.835024 | 2.13E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene34191 | 0.843455 | 1.39E-58 | -1.69E-46 |
| MS.gene049170 | MS.gene34191 | 0.82998 | 3.80E-55 | -1.69E-46 |
| MS.gene049260 | MS.gene34191 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene049284 | MS.gene34191 | 0.826963 | 2.03E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene34191 | 0.837243 | 5.83E-57 | -1.69E-46 |
| MS.gene049356 | MS.gene34191 | 0.847979 | 8.21E-60 | -1.69E-46 |
| MS.gene049378 | MS.gene34191 | 0.803784 | 2.96E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene34191 | 0.806368 | 8.51E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene34191 | 0.82224 | 2.63E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene34191 | 0.824897 | 6.29E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene34191 | 0.863684 | 2.09E-64 | -1.69E-46 |
| MS.gene049910 | MS.gene34191 | 0.852628 | 4.07E-61 | -1.69E-46 |
| MS.gene049915 | MS.gene34191 | 0.834514 | 2.87E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene34191 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene050128 | MS.gene34191 | 0.873855 | 1.06E-67 | -1.69E-46 |
| MS.gene050301 | MS.gene34191 | 0.881646 | 2.02E-70 | -1.69E-46 |
| MS.gene050397 | MS.gene34191 | 0.826129 | 3.21E-54 | -1.69E-46 |
| MS.gene050404 | MS.gene34191 | 0.847314 | 1.25E-59 | -1.69E-46 |
| MS.gene050406 | MS.gene34191 | 0.867033 | 1.84E-65 | -1.69E-46 |
| MS.gene050426 | MS.gene34191 | -0.862856 | 3.77E-64 | -1.69E-46 |
| MS.gene050432 | MS.gene34191 | 0.804915 | 1.72E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene34191 | 0.845663 | 3.53E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene34191 | 0.879154 | 1.57E-69 | -1.69E-46 |
| MS.gene050642 | MS.gene34191 | 0.837427 | 5.23E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene34191 | 0.886424 | 3.46E-72 | -1.69E-46 |
| MS.gene050812 | MS.gene34191 | 0.834823 | 2.40E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene34191 | 0.811367 | 7.25E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene34191 | 0.814681 | 1.36E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene34191 | 0.833915 | 4.05E-56 | -1.69E-46 |
| MS.gene05119 | MS.gene34191 | -0.803255 | 3.80E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene34191 | 0.841664 | 4.14E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene34191 | 0.811565 | 6.57E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene34191 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene34191 | 0.861285 | 1.14E-63 | -1.69E-46 |
| MS.gene051605 | MS.gene34191 | 0.811411 | 7.10E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene34191 | 0.834603 | 2.72E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene34191 | 0.855279 | 7.02E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene34191 | -0.836466 | 9.21E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene34191 | 0.880359 | 5.86E-70 | -1.69E-46 |
| MS.gene052078 | MS.gene34191 | 0.839578 | 1.46E-57 | -1.69E-46 |
| MS.gene052134 | MS.gene34191 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene34191 | 0.829575 | 4.77E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene34191 | 0.84573 | 3.38E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene34191 | 0.93202 | 1.59E-94 | -1.69E-46 |
| MS.gene052253 | MS.gene34191 | 0.876287 | 1.57E-68 | -1.69E-46 |
| MS.gene052255 | MS.gene34191 | 0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene34191 | 0.878525 | 2.62E-69 | -1.69E-46 |
| MS.gene052340 | MS.gene34191 | 0.93168 | 2.64E-94 | -1.69E-46 |
| MS.gene052414 | MS.gene34191 | 0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene34191 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene34191 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene34191 | 0.851651 | 7.73E-61 | -1.69E-46 |
| MS.gene052758 | MS.gene34191 | 0.801714 | 7.90E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene34191 | 0.857589 | 1.47E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene34191 | 0.823792 | 1.14E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene34191 | 0.869148 | 3.85E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene34191 | 0.840997 | 6.20E-58 | -1.69E-46 |
| MS.gene053330 | MS.gene34191 | 0.819844 | 9.38E-53 | -1.69E-46 |
| MS.gene053494 | MS.gene34191 | 0.831708 | 1.43E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene34191 | 0.880627 | 4.70E-70 | -1.69E-46 |
| MS.gene053559 | MS.gene34191 | 0.835476 | 1.64E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene34191 | 0.878504 | 2.66E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene34191 | 0.823976 | 1.04E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene34191 | 0.862845 | 3.80E-64 | -1.69E-46 |
| MS.gene054123 | MS.gene34191 | 0.8721 | 4.12E-67 | -1.69E-46 |
| MS.gene054183 | MS.gene34191 | 0.845129 | 4.92E-59 | -1.69E-46 |
| MS.gene054349 | MS.gene34191 | 0.896769 | 2.68E-76 | -1.69E-46 |
| MS.gene054556 | MS.gene34191 | 0.810937 | 8.99E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene34191 | 0.801091 | 1.06E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene34191 | 0.879886 | 8.64E-70 | -1.69E-46 |
| MS.gene054955 | MS.gene34191 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene34191 | 0.848926 | 4.49E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene34191 | 0.899192 | 2.53E-77 | -1.69E-46 |
| MS.gene055277 | MS.gene34191 | 0.825525 | 4.47E-54 | -1.69E-46 |
| MS.gene055369 | MS.gene34191 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene34191 | 0.854314 | 1.34E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene34191 | 0.838068 | 3.58E-57 | -1.69E-46 |
| MS.gene055533 | MS.gene34191 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene34191 | 0.833395 | 5.47E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene34191 | 0.900354 | 7.97E-78 | -1.69E-46 |
| MS.gene055604 | MS.gene34191 | 0.840863 | 6.73E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene34191 | 0.810261 | 1.26E-50 | -1.69E-46 |
| MS.gene055859 | MS.gene34191 | 0.813503 | 2.48E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene34191 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene056233 | MS.gene34191 | 0.822453 | 2.35E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene34191 | 0.859123 | 5.14E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene34191 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene34191 | 0.83739 | 5.35E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene34191 | 0.860197 | 2.44E-63 | -1.69E-46 |
| MS.gene056659 | MS.gene34191 | 0.888908 | 3.89E-73 | -1.69E-46 |
| MS.gene056719 | MS.gene34191 | 0.850163 | 2.03E-60 | -1.69E-46 |
| MS.gene056723 | MS.gene34191 | 0.88038 | 5.76E-70 | -1.69E-46 |
| MS.gene056899 | MS.gene34191 | -0.845656 | 3.54E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene34191 | 0.844736 | 6.29E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene34191 | 0.880686 | 4.48E-70 | -1.69E-46 |
| MS.gene057121 | MS.gene34191 | 0.830303 | 3.17E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene34191 | 0.861645 | 8.87E-64 | -1.69E-46 |
| MS.gene057396 | MS.gene34191 | 0.896252 | 4.41E-76 | -1.69E-46 |
| MS.gene057448 | MS.gene34191 | 0.880102 | 7.24E-70 | -1.69E-46 |
| MS.gene057449 | MS.gene34191 | 0.8634 | 2.56E-64 | -1.69E-46 |
| MS.gene057450 | MS.gene34191 | 0.880585 | 4.86E-70 | -1.69E-46 |
| MS.gene057537 | MS.gene34191 | 0.836626 | 8.38E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene34191 | 0.855221 | 7.30E-62 | -1.69E-46 |
| MS.gene057750 | MS.gene34191 | 0.810112 | 1.36E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene34191 | 0.824328 | 8.57E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene34191 | 0.845364 | 4.25E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene34191 | 0.830795 | 2.40E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene34191 | 0.819477 | 1.14E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene34191 | 0.886009 | 4.96E-72 | -1.69E-46 |
| MS.gene058007 | MS.gene34191 | 0.846479 | 2.12E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene34191 | 0.857055 | 2.12E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene34191 | 0.847641 | 1.02E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene34191 | 0.885752 | 6.20E-72 | -1.69E-46 |
| MS.gene058233 | MS.gene34191 | 0.836759 | 7.75E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene34191 | 0.846598 | 1.96E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene34191 | 0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene34191 | 0.879494 | 1.19E-69 | -1.69E-46 |
| MS.gene058371 | MS.gene34191 | 0.819922 | 9.00E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene34191 | 0.820475 | 6.73E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene34191 | 0.846854 | 1.67E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene34191 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene34191 | 0.852761 | 3.73E-61 | -1.69E-46 |
| MS.gene058749 | MS.gene34191 | 0.826559 | 2.54E-54 | -1.69E-46 |
| MS.gene058787 | MS.gene34191 | 0.821585 | 3.73E-53 | -1.69E-46 |
| MS.gene058845 | MS.gene34191 | 0.835168 | 1.96E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene34191 | 0.824326 | 8.58E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene34191 | 0.874049 | 9.15E-68 | -1.69E-46 |
| MS.gene058949 | MS.gene34191 | 0.847672 | 9.97E-60 | -1.69E-46 |
| MS.gene059011 | MS.gene34191 | 0.867257 | 1.56E-65 | -1.69E-46 |
| MS.gene05907 | MS.gene34191 | 0.868792 | 5.02E-66 | -1.69E-46 |
| MS.gene059141 | MS.gene34191 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene34191 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene34191 | 0.892586 | 1.39E-74 | -1.69E-46 |
| MS.gene059294 | MS.gene34191 | 0.83474 | 2.52E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene34191 | 0.837211 | 5.94E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene34191 | 0.867506 | 1.30E-65 | -1.69E-46 |
| MS.gene059462 | MS.gene34191 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene34191 | 0.819272 | 1.27E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene34191 | 0.882602 | 9.08E-71 | -1.69E-46 |
| MS.gene05959 | MS.gene34191 | 0.826691 | 2.36E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene34191 | 0.861709 | 8.48E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene34191 | 0.888261 | 6.91E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene34191 | 0.898661 | 4.26E-77 | -1.69E-46 |
| MS.gene059695 | MS.gene34191 | 0.896849 | 2.48E-76 | -1.69E-46 |
| MS.gene059708 | MS.gene34191 | 0.823939 | 1.06E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene34191 | 0.851265 | 9.93E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene34191 | 0.843486 | 1.36E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene34191 | 0.878416 | 2.86E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene34191 | 0.892466 | 1.55E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene34191 | 0.867567 | 1.24E-65 | -1.69E-46 |
| MS.gene060083 | MS.gene34191 | 0.805855 | 1.09E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene34191 | 0.853691 | 2.02E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene34191 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene34191 | 0.838394 | 2.95E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene34191 | 0.87851 | 2.65E-69 | -1.69E-46 |
| MS.gene060495 | MS.gene34191 | 0.858611 | 7.31E-63 | -1.69E-46 |
| MS.gene060496 | MS.gene34191 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene34191 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene34191 | 0.917909 | 2.99E-86 | -1.69E-46 |
| MS.gene061051 | MS.gene34191 | -0.877823 | 4.61E-69 | -1.69E-46 |
| MS.gene061112 | MS.gene34191 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene34191 | 0.838393 | 2.95E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene34191 | 0.873174 | 1.80E-67 | -1.69E-46 |
| MS.gene061265 | MS.gene34191 | 0.823875 | 1.09E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAAAACTGAGGAGATTT+TGG | 0.193705 | 6.2:-2746859 | MS.gene34191:CDS |
| AATGTTGTTAGCAAAGTTAT+TGG | 0.287367 | 6.2:-2748865 | None:intergenic |
| TGCTGTTGGCTAGCAGCTAT+TGG | 0.344544 | 6.2:-2746891 | MS.gene34191:CDS |
| ATTGGTGCTCTTCCTGTTGT+TGG | 0.376523 | 6.2:-2748847 | MS.gene34191:CDS |
| TGGAAGGAGTCGGAAGGCTT+CGG | 0.426849 | 6.2:-2746839 | MS.gene34191:CDS |
| GTGTAGGCAGGGGATCAGGC+AGG | 0.438193 | 6.2:-2746936 | MS.gene34191:intron |
| CAGCATAGCAGAACATAGAT+AGG | 0.443607 | 6.2:+2746909 | None:intergenic |
| GCTAGGATTATGAGTGATGA+AGG | 0.474789 | 6.2:-2748817 | MS.gene34191:CDS |
| CTAAGTAAAGCTTTCAGAGA+TGG | 0.494163 | 6.2:+2746745 | None:intergenic |
| CTCTCTTGCTTCATCCATCA+TGG | 0.504937 | 6.2:+2746776 | None:intergenic |
| TGGCTAGCAGCTATTGGTGC+AGG | 0.509243 | 6.2:-2746885 | MS.gene34191:CDS |
| ATGAGTGATGAAGGTGGTGT+TGG | 0.509665 | 6.2:-2748808 | MS.gene34191:CDS |
| CTAGCTAAAAGACCAACAAC+AGG | 0.516749 | 6.2:+2748835 | None:intergenic |
| GCTGAGTTTAGAAGAAGGGT+TGG | 0.525341 | 6.2:-2748766 | MS.gene34191:CDS |
| TTCATCCATCATGGCTATGA+AGG | 0.528276 | 6.2:+2746785 | None:intergenic |
| ATGGATGAAGCAAGAGAGGT+TGG | 0.532240 | 6.2:-2746771 | MS.gene34191:CDS |
| TCTATGTTCTGCTATGCTGT+TGG | 0.533155 | 6.2:-2746905 | MS.gene34191:CDS |
| GTAGGCAGGGGATCAGGCAG+GGG | 0.537786 | 6.2:-2746934 | MS.gene34191:intron |
| TGTAGGCAGGGGATCAGGCA+GGG | 0.550820 | 6.2:-2746935 | MS.gene34191:intron |
| TATCAGTTTCAAGCAAGAAG+AGG | 0.555632 | 6.2:-2748709 | MS.gene34191:CDS |
| AGTTTCAAGCAAGAAGAGGA+AGG | 0.571685 | 6.2:-2748705 | MS.gene34191:CDS |
| ACAGACCTTCATAGCCATGA+TGG | 0.577761 | 6.2:-2746790 | MS.gene34191:CDS |
| GTTTCAAGCAAGAAGAGGAA+GGG | 0.598303 | 6.2:-2748704 | MS.gene34191:intron |
| CATGATGGATGAAGCAAGAG+AGG | 0.615451 | 6.2:-2746775 | MS.gene34191:CDS |
| TGCAGGTCTTCTCAAAACTG+AGG | 0.678847 | 6.2:-2746868 | MS.gene34191:CDS |
| AGGATTATGAGTGATGAAGG+TGG | 0.737229 | 6.2:-2748814 | MS.gene34191:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGCAAAATTTAATAAA+AGG | + | chr6.2:2746956-2746975 | None:intergenic | 10.0% |
| !! | AAATGCAAAATTTAATAAAA+GGG | + | chr6.2:2746955-2746974 | None:intergenic | 10.0% |
| !!! | TTATTAAATTTTGCATTTTT+TGG | - | chr6.2:2746957-2746976 | MS.gene34191:intron | 10.0% |
| !! | TATAGTTAAATACTTAAATG+AGG | - | chr6.2:2748355-2748374 | MS.gene34191:intron | 15.0% |
| !! | TTAGTAAAATTAGAGTTTAA+TGG | + | chr6.2:2747429-2747448 | None:intergenic | 15.0% |
| !!! | CATTTTCTCATAAAATTATA+AGG | + | chr6.2:2747242-2747261 | None:intergenic | 15.0% |
| !! | AAAGATTCATATTTGATTGT+GGG | + | chr6.2:2748447-2748466 | None:intergenic | 20.0% |
| !! | AATCAAATATGAATCTTTCT+TGG | - | chr6.2:2748449-2748468 | MS.gene34191:intron | 20.0% |
| !! | ATCAAATATGAATCTTTCTT+GGG | - | chr6.2:2748450-2748469 | MS.gene34191:intron | 20.0% |
| !! | GATAATTAGAATATCAAATC+CGG | + | chr6.2:2748126-2748145 | None:intergenic | 20.0% |
| !! | GCAATCTTATAATTTGATTA+AGG | - | chr6.2:2748264-2748283 | MS.gene34191:intron | 20.0% |
| !! | GTTGTAATCTAATACTTAAA+GGG | - | chr6.2:2747343-2747362 | MS.gene34191:intron | 20.0% |
| !! | TCATTTCTCATAAAATAACA+AGG | + | chr6.2:2747046-2747065 | None:intergenic | 20.0% |
| !! | TCTTATAATTTGATTAAGGT+TGG | - | chr6.2:2748268-2748287 | MS.gene34191:intron | 20.0% |
| !! | TGTTGTAATCTAATACTTAA+AGG | - | chr6.2:2747342-2747361 | MS.gene34191:intron | 20.0% |
| !! | TTCAAATAGAAATGAGAATT+GGG | - | chr6.2:2747301-2747320 | MS.gene34191:intron | 20.0% |
| !! | TTCTTATAGTTCAATTTATG+AGG | - | chr6.2:2748213-2748232 | MS.gene34191:intron | 20.0% |
| !!! | AAAATTGATTCTAACTAGTT+TGG | + | chr6.2:2747695-2747714 | None:intergenic | 20.0% |
| !!! | AAACAATTCATCACTTTTTA+AGG | + | chr6.2:2748415-2748434 | None:intergenic | 20.0% |
| !!! | ACTAATGTAATTTTGCATTT+TGG | - | chr6.2:2747444-2747463 | MS.gene34191:intron | 20.0% |
| !!! | CTAATGTAATTTTGCATTTT+GGG | - | chr6.2:2747445-2747464 | MS.gene34191:intron | 20.0% |
| !!! | TTGATAAATGTTGCATTTTT+TGG | - | chr6.2:2747154-2747173 | MS.gene34191:intron | 20.0% |
| ! | AAGATTCATATTTGATTGTG+GGG | + | chr6.2:2748446-2748465 | None:intergenic | 25.0% |
| ! | AAGCTTCAAAATTTGATCAT+GGG | + | chr6.2:2748186-2748205 | None:intergenic | 25.0% |
| ! | AATCTACCTCAAGAATAAAA+AGG | + | chr6.2:2748571-2748590 | None:intergenic | 25.0% |
| ! | AATGTAAAGTGAGTTATGTT+TGG | - | chr6.2:2747540-2747559 | MS.gene34191:intron | 25.0% |
| ! | GAAAGATTCATATTTGATTG+TGG | + | chr6.2:2748448-2748467 | None:intergenic | 25.0% |
| ! | GCAACATTTATCAAATCATA+AGG | + | chr6.2:2747148-2747167 | None:intergenic | 25.0% |
| ! | GTAAAATTAGAGTTTAATGG+AGG | + | chr6.2:2747426-2747445 | None:intergenic | 25.0% |
| ! | GTTCAAATAGAAATGAGAAT+TGG | - | chr6.2:2747300-2747319 | MS.gene34191:intron | 25.0% |
| ! | TTCAGTGTAAACTTATAAAC+TGG | - | chr6.2:2747943-2747962 | MS.gene34191:intron | 25.0% |
| ! | TTCATGTGCTAAAATAGAAA+TGG | - | chr6.2:2748612-2748631 | MS.gene34191:intron | 25.0% |
| !! | TCTTTTCCTTTTTATTCTTG+AGG | - | chr6.2:2748562-2748581 | MS.gene34191:intron | 25.0% |
| !! | TTGATGATATTCGCTAATAA+GGG | - | chr6.2:2747846-2747865 | MS.gene34191:intron | 25.0% |
| !!! | AAATTGATTTTGGTTGATTC+TGG | - | chr6.2:2747503-2747522 | MS.gene34191:intron | 25.0% |
| !!! | GAGTTGACAAAAATTGATTT+TGG | - | chr6.2:2747493-2747512 | MS.gene34191:intron | 25.0% |
| !!! | TATTTTTTGACTTGTGAAGT+TGG | - | chr6.2:2747188-2747207 | MS.gene34191:intron | 25.0% |
| !!! | TTCTGAAGTAAGAAGATAAA+TGG | + | chr6.2:2748103-2748122 | None:intergenic | 25.0% |
| AACATGAAATTAACCTCAAG+AGG | + | chr6.2:2747106-2747125 | None:intergenic | 30.0% | |
| AATGTCCAAATTTGATCATG+GGG | + | chr6.2:2748329-2748348 | None:intergenic | 30.0% | |
| ACAATGTCCAAATTTGATCA+TGG | + | chr6.2:2748331-2748350 | None:intergenic | 30.0% | |
| ACCTTAATCAGACAACTATA+AGG | + | chr6.2:2747783-2747802 | None:intergenic | 30.0% | |
| ACCTTATAGTTGTCTGATTA+AGG | - | chr6.2:2747779-2747798 | MS.gene34191:intron | 30.0% | |
| AGCTTCAAAATTTGATCATG+GGG | + | chr6.2:2748185-2748204 | None:intergenic | 30.0% | |
| ATCATCAACCATAATCAACA+GGG | + | chr6.2:2747834-2747853 | None:intergenic | 30.0% | |
| ATTTGATTAAGGTTGGCATT+TGG | - | chr6.2:2748275-2748294 | MS.gene34191:intron | 30.0% | |
| CAACTATTGATCACAGAATT+TGG | + | chr6.2:2748071-2748090 | None:intergenic | 30.0% | |
| CAAGCTTCAAAATTTGATCA+TGG | + | chr6.2:2748187-2748206 | None:intergenic | 30.0% | |
| CAATGTCCAAATTTGATCAT+GGG | + | chr6.2:2748330-2748349 | None:intergenic | 30.0% | |
| CTAGTTTGAGTGATTTCATT+CGG | - | chr6.2:2748494-2748513 | MS.gene34191:intron | 30.0% | |
| GTGTGTTAGAATATCAAATC+TGG | + | chr6.2:2748163-2748182 | None:intergenic | 30.0% | |
| TATCATCAACCATAATCAAC+AGG | + | chr6.2:2747835-2747854 | None:intergenic | 30.0% | |
| TGATGATATTCGCTAATAAG+GGG | - | chr6.2:2747847-2747866 | MS.gene34191:intron | 30.0% | |
| TTATCTTCTTACTTCAGAAC+CGG | - | chr6.2:2748104-2748123 | MS.gene34191:intron | 30.0% | |
| ! | ATTTTGCTGAGTTTAGAAGA+AGG | - | chr6.2:2746841-2746860 | MS.gene34191:CDS | 30.0% |
| ! | CACTCTTCTGTTTGAAATAT+AGG | - | chr6.2:2748036-2748055 | MS.gene34191:intron | 30.0% |
| ! | GGGATTTAAAGTTGTCAAAT+GGG | - | chr6.2:2748470-2748489 | MS.gene34191:intron | 30.0% |
| ! | GTTACAATTTTTACCTCTTG+AGG | - | chr6.2:2747090-2747109 | MS.gene34191:intron | 30.0% |
| ! | GTTTGAAATATAGGCACAAT+TGG | - | chr6.2:2748045-2748064 | MS.gene34191:intron | 30.0% |
| ! | TACACTTGCAAAGTCAATTT+TGG | - | chr6.2:2747714-2747733 | MS.gene34191:intron | 30.0% |
| ! | TATTCTTGAGGTAGATTTTG+TGG | - | chr6.2:2748574-2748593 | MS.gene34191:intron | 30.0% |
| ! | TGGGATTTAAAGTTGTCAAA+TGG | - | chr6.2:2748469-2748488 | MS.gene34191:intron | 30.0% |
| ! | TTTTGCTGAGTTTAGAAGAA+GGG | - | chr6.2:2746842-2746861 | MS.gene34191:CDS | 30.0% |
| !! | ATTAGCCTTCATTCATTGTA+AGG | + | chr6.2:2748534-2748553 | None:intergenic | 30.0% |
| !! | GTTGATGATATTCGCTAATA+AGG | - | chr6.2:2747845-2747864 | MS.gene34191:intron | 30.0% |
| !!! | CTTTTTTTTACTTGTGAGGT+TGG | - | chr6.2:2746992-2747011 | MS.gene34191:intron | 30.0% |
| !!! | GTTGCTTTTTTTTACTTGTG+AGG | - | chr6.2:2746988-2747007 | MS.gene34191:intron | 30.0% |
| AATGATACCTGACTAACGAA+TGG | + | chr6.2:2747874-2747893 | None:intergenic | 35.0% | |
| AGTGACTTGAGCAACAAATT+TGG | - | chr6.2:2747578-2747597 | MS.gene34191:intron | 35.0% | |
| ATTCATATTTGATTGTGGGG+TGG | + | chr6.2:2748443-2748462 | None:intergenic | 35.0% | |
| CGTTAGTCAGGTATCATTTA+GGG | - | chr6.2:2747876-2747895 | MS.gene34191:intron | 35.0% | |
| GATGCGAATTTATTGGATGA+CGG | - | chr6.2:2747372-2747391 | MS.gene34191:intron | 35.0% | |
| GCAAGATGATGCGAATTTAT+TGG | - | chr6.2:2747365-2747384 | MS.gene34191:intron | 35.0% | |
| GTGACTTGAGCAACAAATTT+GGG | - | chr6.2:2747579-2747598 | MS.gene34191:intron | 35.0% | |
| GTTAGTCAGGTATCATTTAG+GGG | - | chr6.2:2747877-2747896 | MS.gene34191:intron | 35.0% | |
| TATCAGTTTCAAGCAAGAAG+AGG | - | chr6.2:2746903-2746922 | MS.gene34191:CDS | 35.0% | |
| TCCAACCTTACAATGAATGA+AGG | - | chr6.2:2748526-2748545 | MS.gene34191:intron | 35.0% | |
| TCGTTAGTCAGGTATCATTT+AGG | - | chr6.2:2747875-2747894 | MS.gene34191:intron | 35.0% | |
| ! | AAAACTGAGGAGATTTTGGA+AGG | - | chr6.2:2748757-2748776 | MS.gene34191:CDS | 35.0% |
| ! | TCTCAAAACTGAGGAGATTT+TGG | - | chr6.2:2748753-2748772 | MS.gene34191:CDS | 35.0% |
| !! | GCAAAGTCAATTTTGGTCAT+CGG | - | chr6.2:2747721-2747740 | MS.gene34191:intron | 35.0% |
| !!! | GGTGTTTGTTTGTTTTGTGT+AGG | - | chr6.2:2748660-2748679 | MS.gene34191:intron | 35.0% |
| !!! | GGTTTTCTAAAGTGCATGTT+TGG | - | chr6.2:2747466-2747485 | MS.gene34191:intron | 35.0% |
| !!! | TTGTTTGTTTTGTGTAGGCA+GGG | - | chr6.2:2748665-2748684 | MS.gene34191:intron | 35.0% |
| !!! | TTTGTTTGTTTTGTGTAGGC+AGG | - | chr6.2:2748664-2748683 | MS.gene34191:intron | 35.0% |
| AGGATTATGAGTGATGAAGG+TGG | - | chr6.2:2746798-2746817 | MS.gene34191:CDS | 40.0% | |
| AGTTTCAAGCAAGAAGAGGA+AGG | - | chr6.2:2746907-2746926 | MS.gene34191:CDS | 40.0% | |
| ATCAACCATAATCAACAGGG+TGG | + | chr6.2:2747831-2747850 | None:intergenic | 40.0% | |
| CAGCATAGCAGAACATAGAT+AGG | + | chr6.2:2748706-2748725 | None:intergenic | 40.0% | |
| CTAGCTAAAAGACCAACAAC+AGG | + | chr6.2:2746780-2746799 | None:intergenic | 40.0% | |
| GCCTTCATTCATTGTAAGGT+TGG | + | chr6.2:2748530-2748549 | None:intergenic | 40.0% | |
| GCTAGGATTATGAGTGATGA+AGG | - | chr6.2:2746795-2746814 | MS.gene34191:CDS | 40.0% | |
| GTCTAAACGTGTGTCTAACT+TGG | - | chr6.2:2748639-2748658 | MS.gene34191:intron | 40.0% | |
| GTTTCAAGCAAGAAGAGGAA+GGG | - | chr6.2:2746908-2746927 | MS.gene34191:CDS | 40.0% | |
| TACCACCCCATGATCAAATT+TGG | - | chr6.2:2748321-2748340 | MS.gene34191:intron | 40.0% | |
| TCTATGTTCTGCTATGCTGT+TGG | - | chr6.2:2748707-2748726 | MS.gene34191:CDS | 40.0% | |
| TTCATCCATCATGGCTATGA+AGG | + | chr6.2:2748830-2748849 | None:intergenic | 40.0% | |
| ! | GAGGTAGATTTTGTGGTAGA+AGG | - | chr6.2:2748581-2748600 | MS.gene34191:intron | 40.0% |
| ! | GTTTAATGGAGGTGCAATCA+TGG | + | chr6.2:2747415-2747434 | None:intergenic | 40.0% |
| !!! | CTGTTGTTGGTCTTTTAGCT+AGG | - | chr6.2:2746778-2746797 | MS.gene34191:CDS | 40.0% |
| !!! | TGTTTGTTTTGTGTAGGCAG+GGG | - | chr6.2:2748666-2748685 | MS.gene34191:intron | 40.0% |
| ACAGACCTTCATAGCCATGA+TGG | - | chr6.2:2748822-2748841 | MS.gene34191:CDS | 45.0% | |
| AGTCAGGTATCATTTAGGGG+TGG | - | chr6.2:2747880-2747899 | MS.gene34191:intron | 45.0% | |
| ATGAGTGATGAAGGTGGTGT+TGG | - | chr6.2:2746804-2746823 | MS.gene34191:CDS | 45.0% | |
| ATGGATGAAGCAAGAGAGGT+TGG | - | chr6.2:2748841-2748860 | MS.gene34191:CDS | 45.0% | |
| CTCTCTTGCTTCATCCATCA+TGG | + | chr6.2:2748839-2748858 | None:intergenic | 45.0% | |
| GCTGAGTTTAGAAGAAGGGT+TGG | - | chr6.2:2746846-2746865 | MS.gene34191:CDS | 45.0% | |
| GTCAGGTATCATTTAGGGGT+GGG | - | chr6.2:2747881-2747900 | MS.gene34191:intron | 45.0% | |
| GTCCAAATTTGATCATGGGG+TGG | + | chr6.2:2748326-2748345 | None:intergenic | 45.0% | |
| TCAGGTATCATTTAGGGGTG+GGG | - | chr6.2:2747882-2747901 | MS.gene34191:intron | 45.0% | |
| TGCAGGTCTTCTCAAAACTG+AGG | - | chr6.2:2748744-2748763 | MS.gene34191:CDS | 45.0% | |
| ! | ATTGGTGCTCTTCCTGTTGT+TGG | - | chr6.2:2746765-2746784 | MS.gene34191:CDS | 45.0% |
| !! | AGATTTTGGAAGGAGTCGGA+AGG | - | chr6.2:2748767-2748786 | MS.gene34191:CDS | 45.0% |
| !! | CATGATGGATGAAGCAAGAG+AGG | - | chr6.2:2748837-2748856 | MS.gene34191:CDS | 45.0% |
| !! | GAGGAGATTTTGGAAGGAGT+CGG | - | chr6.2:2748763-2748782 | MS.gene34191:CDS | 45.0% |
| AAGGGGTCCATTCGTTAGTC+AGG | - | chr6.2:2747864-2747883 | MS.gene34191:intron | 50.0% | |
| AGGTATCATTTAGGGGTGGG+GGG | - | chr6.2:2747884-2747903 | MS.gene34191:intron | 50.0% | |
| CAGGTATCATTTAGGGGTGG+GGG | - | chr6.2:2747883-2747902 | MS.gene34191:intron | 50.0% | |
| TTACACTGAACCGTTCCGCA+GGG | + | chr6.2:2747933-2747952 | None:intergenic | 50.0% | |
| TTTACACTGAACCGTTCCGC+AGG | + | chr6.2:2747934-2747953 | None:intergenic | 50.0% | |
| ! | AGCTGCCACCCTGTTGATTA+TGG | - | chr6.2:2747823-2747842 | MS.gene34191:intron | 50.0% |
| ! | TGCTGTTGGCTAGCAGCTAT+TGG | - | chr6.2:2748721-2748740 | MS.gene34191:CDS | 50.0% |
| ! | TTTTGTGTAGGCAGGGGATC+AGG | - | chr6.2:2748672-2748691 | MS.gene34191:intron | 50.0% |
| GGTATCATTTAGGGGTGGGG+GGG | - | chr6.2:2747885-2747904 | MS.gene34191:intron | 55.0% | |
| TGGAAGGAGTCGGAAGGCTT+CGG | - | chr6.2:2748773-2748792 | MS.gene34191:CDS | 55.0% | |
| TGGCTAGCAGCTATTGGTGC+AGG | - | chr6.2:2748727-2748746 | MS.gene34191:CDS | 55.0% | |
| CAGGGTGAAACCCTGCGGAA+CGG | - | chr6.2:2747920-2747939 | MS.gene34191:intron | 60.0% | |
| TGTAGGCAGGGGATCAGGCA+GGG | - | chr6.2:2748677-2748696 | MS.gene34191:intron | 60.0% | |
| CATTTAGGGGTGGGGGGGTG+TGG | - | chr6.2:2747890-2747909 | MS.gene34191:intron | 65.0% | |
| GGGTGCAGGGTGAAACCCTG+CGG | - | chr6.2:2747915-2747934 | MS.gene34191:intron | 65.0% | |
| GTAGGCAGGGGATCAGGCAG+GGG | - | chr6.2:2748678-2748697 | MS.gene34191:intron | 65.0% | |
| GTGTAGGCAGGGGATCAGGC+AGG | - | chr6.2:2748676-2748695 | MS.gene34191:intron | 65.0% | |
| ! | TAGGGGTGGGGGGGTGTGGT+GGG | - | chr6.2:2747894-2747913 | MS.gene34191:intron | 70.0% |
| ! | TTAGGGGTGGGGGGGTGTGG+TGG | - | chr6.2:2747893-2747912 | MS.gene34191:intron | 70.0% |
| ! | AGGGGTGGGGGGGTGTGGTG+GGG | - | chr6.2:2747895-2747914 | MS.gene34191:intron | 75.0% |
| ! | GGGGGGTGTGGTGGGGTGCA+GGG | - | chr6.2:2747902-2747921 | MS.gene34191:intron | 75.0% |
| !! | GGGGGGGTGTGGTGGGGTGC+AGG | - | chr6.2:2747901-2747920 | MS.gene34191:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 2746758 | 2748876 | 2746758 | ID=MS.gene34191 |
| chr6.2 | mRNA | 2746758 | 2748876 | 2746758 | ID=MS.gene34191.t1;Parent=MS.gene34191 |
| chr6.2 | exon | 2748705 | 2748876 | 2748705 | ID=MS.gene34191.t1.exon1;Parent=MS.gene34191.t1 |
| chr6.2 | CDS | 2748705 | 2748876 | 2748705 | ID=cds.MS.gene34191.t1;Parent=MS.gene34191.t1 |
| chr6.2 | exon | 2746758 | 2746952 | 2746758 | ID=MS.gene34191.t1.exon2;Parent=MS.gene34191.t1 |
| chr6.2 | CDS | 2746758 | 2746952 | 2746758 | ID=cds.MS.gene34191.t1;Parent=MS.gene34191.t1 |
| Gene Sequence |
| Protein sequence |
