Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99877.t1 | XP_003601038.1 | 98.3 | 363 | 6 | 0 | 1 | 363 | 1 | 363 | 4.90E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99877.t1 | Q9LDD5 | 27.8 | 245 | 169 | 5 | 122 | 360 | 129 | 371 | 1.8e-20 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99877.t1 | G7J2Z6 | 98.3 | 363 | 6 | 0 | 1 | 363 | 1 | 363 | 3.5e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene99877 | 0.815395 | 9.45E-52 | -1.69E-46 |
| MS.gene049150 | MS.gene99877 | 0.836601 | 8.50E-57 | -1.69E-46 |
| MS.gene049151 | MS.gene99877 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene99877 | 0.838078 | 3.56E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene99877 | 0.81967 | 1.03E-52 | -1.69E-46 |
| MS.gene049284 | MS.gene99877 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene99877 | 0.840933 | 6.45E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene99877 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene99877 | 0.817163 | 3.80E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene99877 | 0.816102 | 6.58E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene99877 | 0.876395 | 1.45E-68 | -1.69E-46 |
| MS.gene049910 | MS.gene99877 | 0.818613 | 1.79E-52 | -1.69E-46 |
| MS.gene049915 | MS.gene99877 | 0.804291 | 2.32E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene99877 | 0.825882 | 3.68E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene99877 | 0.877713 | 5.04E-69 | -1.69E-46 |
| MS.gene050301 | MS.gene99877 | 0.875136 | 3.91E-68 | -1.69E-46 |
| MS.gene050397 | MS.gene99877 | 0.823447 | 1.38E-53 | -1.69E-46 |
| MS.gene050404 | MS.gene99877 | 0.830331 | 3.12E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene99877 | 0.853673 | 2.05E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene99877 | -0.845308 | 4.40E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene99877 | 0.863479 | 2.42E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene99877 | 0.862663 | 4.32E-64 | -1.69E-46 |
| MS.gene050623 | MS.gene99877 | -0.803377 | 3.59E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene99877 | 0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene99877 | 0.855218 | 7.31E-62 | -1.69E-46 |
| MS.gene050971 | MS.gene99877 | 0.834223 | 3.39E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene99877 | 0.814244 | 1.70E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene99877 | -0.811765 | 5.94E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene99877 | 0.84985 | 2.48E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene99877 | 0.816207 | 6.23E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene99877 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene99877 | 0.838094 | 3.53E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene99877 | 0.868424 | 6.60E-66 | -1.69E-46 |
| MS.gene052011 | MS.gene99877 | -0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene99877 | 0.877594 | 5.55E-69 | -1.69E-46 |
| MS.gene052078 | MS.gene99877 | 0.82546 | 4.63E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene99877 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene052178 | MS.gene99877 | 0.850503 | 1.63E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene99877 | 0.906498 | 1.39E-80 | -1.69E-46 |
| MS.gene052253 | MS.gene99877 | 0.843586 | 1.28E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene99877 | 0.847783 | 9.29E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene99877 | 0.896045 | 5.38E-76 | -1.69E-46 |
| MS.gene052485 | MS.gene99877 | 0.80217 | 6.37E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene99877 | 0.861347 | 1.09E-63 | -1.69E-46 |
| MS.gene05316 | MS.gene99877 | 0.875738 | 2.43E-68 | -1.69E-46 |
| MS.gene053209 | MS.gene99877 | 0.830021 | 3.71E-55 | -1.69E-46 |
| MS.gene053494 | MS.gene99877 | 0.827463 | 1.54E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene99877 | 0.883902 | 3.03E-71 | -1.69E-46 |
| MS.gene053559 | MS.gene99877 | 0.856341 | 3.43E-62 | -1.69E-46 |
| MS.gene053577 | MS.gene99877 | 0.807337 | 5.31E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene99877 | 0.875731 | 2.44E-68 | -1.69E-46 |
| MS.gene053907 | MS.gene99877 | 0.826818 | 2.20E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene99877 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene99877 | 0.845119 | 4.95E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene99877 | 0.895611 | 8.13E-76 | -1.69E-46 |
| MS.gene054183 | MS.gene99877 | 0.818555 | 1.84E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene99877 | 0.863062 | 3.25E-64 | -1.69E-46 |
| MS.gene054930 | MS.gene99877 | 0.880231 | 6.51E-70 | -1.69E-46 |
| MS.gene054955 | MS.gene99877 | 0.81867 | 1.74E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene99877 | 0.833774 | 4.40E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene99877 | 0.864975 | 8.26E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene99877 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene99877 | 0.808796 | 2.60E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene99877 | 0.871937 | 4.67E-67 | -1.69E-46 |
| MS.gene055428 | MS.gene99877 | 0.826166 | 3.15E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene99877 | 0.813764 | 2.17E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene99877 | 0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene99877 | 0.878306 | 3.12E-69 | -1.69E-46 |
| MS.gene055601 | MS.gene99877 | -0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene99877 | 0.826922 | 2.08E-54 | -1.69E-46 |
| MS.gene055712 | MS.gene99877 | 0.832761 | 7.86E-56 | -1.69E-46 |
| MS.gene055859 | MS.gene99877 | 0.804203 | 2.42E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene99877 | 0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene99877 | 0.848015 | 8.02E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene99877 | 0.846735 | 1.80E-59 | -1.69E-46 |
| MS.gene056612 | MS.gene99877 | 0.869414 | 3.15E-66 | -1.69E-46 |
| MS.gene056659 | MS.gene99877 | 0.872051 | 4.28E-67 | -1.69E-46 |
| MS.gene056719 | MS.gene99877 | 0.834635 | 2.67E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene99877 | 0.84547 | 3.98E-59 | -1.69E-46 |
| MS.gene056899 | MS.gene99877 | -0.84889 | 4.59E-60 | -1.69E-46 |
| MS.gene056979 | MS.gene99877 | 0.860231 | 2.39E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene99877 | 0.866121 | 3.59E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene99877 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene99877 | 0.845244 | 4.58E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene99877 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene99877 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene99877 | 0.801799 | 7.59E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene99877 | 0.888476 | 5.71E-73 | -1.69E-46 |
| MS.gene057439 | MS.gene99877 | 0.815309 | 9.87E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene99877 | 0.871194 | 8.23E-67 | -1.69E-46 |
| MS.gene057449 | MS.gene99877 | 0.860117 | 2.58E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene99877 | 0.874421 | 6.84E-68 | -1.69E-46 |
| MS.gene057537 | MS.gene99877 | 0.837852 | 4.07E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene99877 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene99877 | 0.811319 | 7.43E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene99877 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene99877 | 0.864823 | 9.22E-65 | -1.69E-46 |
| MS.gene058007 | MS.gene99877 | 0.821852 | 3.24E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene99877 | 0.86121 | 1.20E-63 | -1.69E-46 |
| MS.gene05811 | MS.gene99877 | 0.83377 | 4.41E-56 | -1.69E-46 |
| MS.gene058142 | MS.gene99877 | 0.873209 | 1.76E-67 | -1.69E-46 |
| MS.gene058233 | MS.gene99877 | 0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene99877 | 0.829967 | 3.83E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene99877 | 0.822315 | 2.53E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene99877 | 0.849417 | 3.28E-60 | -1.69E-46 |
| MS.gene058371 | MS.gene99877 | 0.808903 | 2.46E-50 | -1.69E-46 |
| MS.gene058433 | MS.gene99877 | 0.815567 | 8.65E-52 | -1.69E-46 |
| MS.gene058435 | MS.gene99877 | 0.814598 | 1.42E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene99877 | 0.84241 | 2.63E-58 | -1.69E-46 |
| MS.gene058710 | MS.gene99877 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene99877 | 0.82187 | 3.21E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene99877 | 0.811431 | 7.02E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene99877 | 0.840372 | 9.05E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene99877 | 0.823274 | 1.51E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene99877 | 0.864954 | 8.38E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene99877 | 0.849129 | 3.94E-60 | -1.69E-46 |
| MS.gene059011 | MS.gene99877 | 0.816907 | 4.34E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene99877 | 0.855877 | 4.70E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene99877 | 0.877666 | 5.23E-69 | -1.69E-46 |
| MS.gene059294 | MS.gene99877 | 0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene99877 | 0.831265 | 1.84E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene99877 | 0.828658 | 7.96E-55 | -1.69E-46 |
| MS.gene059462 | MS.gene99877 | 0.808877 | 2.50E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene99877 | 0.806174 | 9.35E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene99877 | 0.870335 | 1.58E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene99877 | 0.863957 | 1.72E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene99877 | 0.847229 | 1.32E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene99877 | 0.86212 | 6.34E-64 | -1.69E-46 |
| MS.gene059692 | MS.gene99877 | 0.864737 | 9.80E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene99877 | 0.858756 | 6.62E-63 | -1.69E-46 |
| MS.gene059708 | MS.gene99877 | 0.826848 | 2.17E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene99877 | 0.815332 | 9.76E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene99877 | 0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene99877 | 0.856037 | 4.22E-62 | -1.69E-46 |
| MS.gene059894 | MS.gene99877 | 0.891288 | 4.56E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene99877 | 0.884591 | 1.68E-71 | -1.69E-46 |
| MS.gene060247 | MS.gene99877 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene99877 | 0.819615 | 1.06E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene99877 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene99877 | 0.836859 | 7.31E-57 | -1.69E-46 |
| MS.gene060495 | MS.gene99877 | 0.880026 | 7.70E-70 | -1.69E-46 |
| MS.gene060496 | MS.gene99877 | 0.836746 | 7.81E-57 | -1.69E-46 |
| MS.gene061002 | MS.gene99877 | 0.803087 | 4.12E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene99877 | 0.900313 | 8.30E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene99877 | -0.879129 | 1.60E-69 | -1.69E-46 |
| MS.gene061112 | MS.gene99877 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene99877 | 0.826089 | 3.28E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene99877 | 0.860619 | 1.82E-63 | -1.69E-46 |
| MS.gene061265 | MS.gene99877 | 0.814859 | 1.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99877.t1 | MTR_3g072340 | 98.347 | 363 | 6 | 0 | 1 | 363 | 1 | 363 | 0.0 | 744 |
| MS.gene99877.t1 | MTR_8g098300 | 31.878 | 229 | 138 | 5 | 122 | 340 | 132 | 352 | 2.66e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99877.t1 | AT3G10970 | 75.143 | 350 | 82 | 3 | 19 | 363 | 16 | 365 | 0.0 | 532 |
| MS.gene99877.t1 | AT3G10970 | 75.143 | 350 | 82 | 3 | 19 | 363 | 16 | 365 | 0.0 | 532 |
| MS.gene99877.t1 | AT3G10970 | 74.857 | 350 | 82 | 4 | 19 | 363 | 16 | 364 | 0.0 | 526 |
| MS.gene99877.t1 | AT4G11570 | 28.571 | 231 | 158 | 4 | 122 | 346 | 129 | 358 | 9.84e-23 | 98.6 |
| MS.gene99877.t1 | AT4G11570 | 28.571 | 231 | 158 | 4 | 122 | 346 | 129 | 358 | 9.84e-23 | 98.6 |
Find 85 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAATTTGGTTCTCTTAA+TGG | 0.126410 | 3.2:-65181551 | MS.gene99877:CDS |
| TTAATTACCCGTTGCACTTC+TGG | 0.162081 | 3.2:-65181578 | MS.gene99877:CDS |
| CTCTTGCACGAAAAGTTTAT+TGG | 0.176220 | 3.2:+65181514 | None:intergenic |
| CAGGCTATTGGTGCTGAATA+TGG | 0.193680 | 3.2:-65181373 | MS.gene99877:CDS |
| TAACAAGGGCTCTACATTTA+TGG | 0.213964 | 3.2:-65177939 | MS.gene99877:CDS |
| GTCTATTCCAAGTCTCCTTT+TGG | 0.218068 | 3.2:+65177883 | None:intergenic |
| ACTTCTGGGTCTGATGAATT+TGG | 0.221250 | 3.2:-65181563 | MS.gene99877:CDS |
| TTTCTTCAATTTCAGGCTAT+TGG | 0.255793 | 3.2:-65181385 | MS.gene99877:intron |
| CTTATGGTCTTATCTTCTCT+TGG | 0.300062 | 3.2:-65181137 | MS.gene99877:CDS |
| GGGGCTCGATAAGTACTTTC+AGG | 0.308820 | 3.2:-65179519 | MS.gene99877:intron |
| GAAAACCTGCAGGTATGATT+TGG | 0.315256 | 3.2:-65178029 | MS.gene99877:intron |
| AAAACCTGCAGGTATGATTT+GGG | 0.334866 | 3.2:-65178028 | MS.gene99877:intron |
| TGCTGATAATGTATTGAATA+AGG | 0.363742 | 3.2:-65179981 | MS.gene99877:intron |
| TTATGGTCTTATCTTCTCTT+GGG | 0.375589 | 3.2:-65181136 | MS.gene99877:CDS |
| TTTCAGAAATTTAAGCGGTT+GGG | 0.375742 | 3.2:-65181617 | MS.gene99877:intron |
| TAATTACCCGTTGCACTTCT+GGG | 0.380261 | 3.2:-65181577 | MS.gene99877:CDS |
| AGGCTATTGGTGCTGAATAT+GGG | 0.386192 | 3.2:-65181372 | MS.gene99877:CDS |
| TCTTGCACGAAAAGTTTATT+GGG | 0.386399 | 3.2:+65181515 | None:intergenic |
| CTTTCAATATCAGCATCTTC+AGG | 0.388650 | 3.2:+65180022 | None:intergenic |
| CAATGGAGGGCTTGAGAGAC+TGG | 0.403993 | 3.2:-65179628 | MS.gene99877:CDS |
| GAGGTAACTAAATTAGAAAA+TGG | 0.416310 | 3.2:+65177859 | None:intergenic |
| TACAGAAAGTTCACTGAAGT+TGG | 0.419550 | 3.2:+65177985 | None:intergenic |
| GTAGAAGCTTTGCAACGAAT+GGG | 0.430717 | 3.2:-65179539 | MS.gene99877:CDS |
| GAAAGGTTAATGCTTAATAC+AGG | 0.434222 | 3.2:-65180004 | MS.gene99877:CDS |
| ATGAAGCCAGATGAGGCTTA+TGG | 0.441585 | 3.2:-65181153 | MS.gene99877:CDS |
| TTCTCCTTCTCCCAATTCAA+TGG | 0.455896 | 3.2:-65181712 | MS.gene99877:intron |
| ATAAGACCATAAGCCTCATC+TGG | 0.458482 | 3.2:+65181147 | None:intergenic |
| GAAATTTAAGCGGTTGGGGT+TGG | 0.462374 | 3.2:-65181612 | MS.gene99877:CDS |
| ATGAGAAGTAGCTCTGCAAT+TGG | 0.466015 | 3.2:+65181770 | None:intergenic |
| TTCAGAAATTTAAGCGGTTG+GGG | 0.479959 | 3.2:-65181616 | MS.gene99877:intron |
| GGGCTCTACATTTATGGACT+TGG | 0.483174 | 3.2:-65177933 | MS.gene99877:CDS |
| ATCAGACCCAGAAGTGCAAC+GGG | 0.483856 | 3.2:+65181571 | None:intergenic |
| AGACGAGAAGGGTGAGAGAG+AGG | 0.486734 | 3.2:+65181741 | None:intergenic |
| GGAGAAGATTGAAGACGAGA+AGG | 0.491517 | 3.2:+65181729 | None:intergenic |
| GAGGAGACTGTTTGCTAACA+AGG | 0.492526 | 3.2:-65177954 | MS.gene99877:CDS |
| ATGATGGCTGTAGCATTGAT+TGG | 0.493659 | 3.2:-65178274 | MS.gene99877:CDS |
| CTGTTGTTTCAAGTCTTGAC+AGG | 0.493722 | 3.2:-65179571 | MS.gene99877:CDS |
| CTTGAGAGACTGGTTGGAAG+CGG | 0.496286 | 3.2:-65179618 | MS.gene99877:CDS |
| ATTTCTTTCTGCTGCTGTCA+AGG | 0.509159 | 3.2:-65179011 | MS.gene99877:intron |
| GGTTGGGGTTGGTTAAGAAT+CGG | 0.514034 | 3.2:-65181601 | MS.gene99877:CDS |
| GGTAGAAGCTTTGCAACGAA+TGG | 0.518335 | 3.2:-65179540 | MS.gene99877:CDS |
| TAGATAAGAATCCTCCCAAA+AGG | 0.520439 | 3.2:-65177898 | MS.gene99877:CDS |
| GAGAAGATTGAAGACGAGAA+GGG | 0.520872 | 3.2:+65181730 | None:intergenic |
| AATCCTCCCAAAAGGAGACT+TGG | 0.522823 | 3.2:-65177890 | MS.gene99877:CDS |
| TTGAATGATAAGTTACAAGA+TGG | 0.526065 | 3.2:-65181201 | MS.gene99877:CDS |
| TACCCTCTTCAGAGGCAAGT+TGG | 0.529248 | 3.2:+65180253 | None:intergenic |
| CTGAAGATGCTGATATTGAA+AGG | 0.531900 | 3.2:-65180021 | MS.gene99877:CDS |
| GGAGGGCTTGAGAGACTGGT+TGG | 0.532973 | 3.2:-65179624 | MS.gene99877:CDS |
| TATCTTCTCTTGGGATAATG+TGG | 0.533521 | 3.2:-65181127 | MS.gene99877:CDS |
| AAAATGCCTTGTAGCTTGAT+CGG | 0.536912 | 3.2:-65178363 | MS.gene99877:intron |
| GCAATTGTTACAGAGGAGGA+TGG | 0.538826 | 3.2:-65179055 | MS.gene99877:CDS |
| TAATAAGGAAGAAAGTGAGC+TGG | 0.541171 | 3.2:-65179800 | MS.gene99877:CDS |
| CAGTCTCTCAAGCCCTCCAT+TGG | 0.551720 | 3.2:+65179629 | None:intergenic |
| TGTACCATTGAATTGGGAGA+AGG | 0.553571 | 3.2:+65181708 | None:intergenic |
| AACTTTCTGTAATCAACTTG+AGG | 0.558287 | 3.2:-65177973 | MS.gene99877:CDS |
| TGCGCACAATTGCACAATGA+TGG | 0.558831 | 3.2:-65178290 | MS.gene99877:CDS |
| AAGACTTGAAACAACAGCAC+AGG | 0.562184 | 3.2:+65179577 | None:intergenic |
| TGTTACAGAGGAGGATGGGA+TGG | 0.569897 | 3.2:-65179050 | MS.gene99877:CDS |
| CTTCTCTTGGGATAATGTGG+TGG | 0.570792 | 3.2:-65181124 | MS.gene99877:intron |
| GGCTATTGGTGCTGAATATG+GGG | 0.570817 | 3.2:-65181371 | MS.gene99877:CDS |
| GAGCTCTGAAGAGGAAGGCA+TGG | 0.579417 | 3.2:-65180278 | MS.gene99877:CDS |
| AGCTGGATAGACTGAAGTTG+AGG | 0.579443 | 3.2:-65179783 | MS.gene99877:CDS |
| CTTACCACATCAACTTTCAA+CGG | 0.581754 | 3.2:+65181319 | None:intergenic |
| TTAGGCAATTGTTACAGAGG+AGG | 0.584743 | 3.2:-65179059 | MS.gene99877:intron |
| CAATTGTTACAGAGGAGGAT+GGG | 0.588885 | 3.2:-65179054 | MS.gene99877:CDS |
| GAACCAACTTGCCTCTGAAG+AGG | 0.589009 | 3.2:-65180256 | MS.gene99877:CDS |
| CTAGCTTGAAAGACCAATGG+AGG | 0.590403 | 3.2:-65179642 | MS.gene99877:intron |
| TCGGAAACCTTCCAAGTGTG+TGG | 0.592930 | 3.2:-65178344 | MS.gene99877:CDS |
| CATCAGACCCAGAAGTGCAA+CGG | 0.595701 | 3.2:+65181570 | None:intergenic |
| TGTCTAGCTTGAAAGACCAA+TGG | 0.604162 | 3.2:-65179645 | MS.gene99877:intron |
| AAACCTGCAGGTATGATTTG+GGG | 0.605389 | 3.2:-65178027 | MS.gene99877:intron |
| CTGATACTCGAGCTCTGAAG+AGG | 0.607439 | 3.2:-65180287 | MS.gene99877:CDS |
| CTATGCTATGAAGCCAGATG+AGG | 0.608639 | 3.2:-65181160 | MS.gene99877:CDS |
| TGCGCAGCAGTTACTGCTCG+AGG | 0.613905 | 3.2:+65178307 | None:intergenic |
| TACTCGAGCTCTGAAGAGGA+AGG | 0.615626 | 3.2:-65180283 | MS.gene99877:CDS |
| AACCAACTTGCCTCTGAAGA+GGG | 0.616443 | 3.2:-65180255 | MS.gene99877:intron |
| AGACTTGAAACAACAGCACA+GGG | 0.623892 | 3.2:+65179578 | None:intergenic |
| GATTAACATACCCTCTTCAG+AGG | 0.624343 | 3.2:+65180245 | None:intergenic |
| AGGAGACTGTTTGCTAACAA+GGG | 0.627993 | 3.2:-65177953 | MS.gene99877:CDS |
| ATTGGTGCTGAATATGGGGA+AGG | 0.632973 | 3.2:-65181367 | MS.gene99877:CDS |
| TCTGCAATTGGAGAAAGTAG+TGG | 0.658939 | 3.2:+65181782 | None:intergenic |
| TAGCTTGAAAGACCAATGGA+GGG | 0.664389 | 3.2:-65179641 | MS.gene99877:CDS |
| TAGAAGCTTTGCAACGAATG+GGG | 0.667490 | 3.2:-65179538 | MS.gene99877:CDS |
| TGGACCGTTGAAAGTTGATG+TGG | 0.704990 | 3.2:-65181323 | MS.gene99877:intron |
| GACTTGAAACAACAGCACAG+GGG | 0.781371 | 3.2:+65179579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATTATATTATAAT+TGG | + | chr3.2:65180303-65180322 | None:intergenic | 0.0% |
| !!! | CAGTTTTTTTTTTTTTTTTT+TGG | - | chr3.2:65178592-65178611 | MS.gene99877:intron | 10.0% |
| !! | AAATATAGGATAATTACATT+TGG | - | chr3.2:65180775-65180794 | MS.gene99877:intron | 15.0% |
| !! | AATATAGGATAATTACATTT+GGG | - | chr3.2:65180776-65180795 | MS.gene99877:intron | 15.0% |
| !! | TTATGACAAGATTTATTATA+GGG | - | chr3.2:65180435-65180454 | MS.gene99877:intron | 15.0% |
| !! | TTTATGACAAGATTTATTAT+AGG | - | chr3.2:65180434-65180453 | MS.gene99877:intron | 15.0% |
| !!! | ATTTTTCAGTGTTTAATTTA+AGG | - | chr3.2:65178663-65178682 | MS.gene99877:intron | 15.0% |
| !!! | TTTGGTAATAATTTAAGAAA+TGG | - | chr3.2:65178830-65178849 | MS.gene99877:intron | 15.0% |
| !! | AAAAATTAGCAGCAAATTAT+TGG | + | chr3.2:65181264-65181283 | None:intergenic | 20.0% |
| !! | AAAAATTGTACCATTGAATT+GGG | + | chr3.2:65177961-65177980 | None:intergenic | 20.0% |
| !! | AAGTGTTCATTTCAATATAA+GGG | + | chr3.2:65181549-65181568 | None:intergenic | 20.0% |
| !! | ATTATTTGGGGATAATATTA+TGG | + | chr3.2:65181114-65181133 | None:intergenic | 20.0% |
| !! | ATTTGATGTTATTAACTCAA+CGG | + | chr3.2:65181516-65181535 | None:intergenic | 20.0% |
| !! | TAATTATATTATAATTGGCC+AGG | + | chr3.2:65180298-65180317 | None:intergenic | 20.0% |
| !!! | AAAGTGTTCATTTCAATATA+AGG | + | chr3.2:65181550-65181569 | None:intergenic | 20.0% |
| !!! | GTATGTAACTATTATTCTTT+TGG | - | chr3.2:65181586-65181605 | MS.gene99877:CDS | 20.0% |
| !!! | GTTAAAGAGTGTTTTTTTAT+TGG | - | chr3.2:65178234-65178253 | MS.gene99877:intron | 20.0% |
| !!! | GTTATCATAAATGAATTTTG+TGG | - | chr3.2:65178376-65178395 | MS.gene99877:intron | 20.0% |
| !!! | TGGTAAGTTATTTTAATTCA+TGG | - | chr3.2:65178556-65178575 | MS.gene99877:intron | 20.0% |
| !!! | TGGTAATTTTTGTTGAAAAT+AGG | - | chr3.2:65178431-65178450 | MS.gene99877:intron | 20.0% |
| ! | AAATAATTCCAAGTTGTACT+AGG | + | chr3.2:65181085-65181104 | None:intergenic | 25.0% |
| ! | AATTGCCTAAAAAACGAATA+AGG | + | chr3.2:65180591-65180610 | None:intergenic | 25.0% |
| ! | AGTGTTCATTTCAATATAAG+GGG | + | chr3.2:65181548-65181567 | None:intergenic | 25.0% |
| ! | AGTTATATGCTATATACATC+AGG | + | chr3.2:65179994-65180013 | None:intergenic | 25.0% |
| ! | ATCAACATACAATATACAAG+TGG | + | chr3.2:65180682-65180701 | None:intergenic | 25.0% |
| ! | ATGAGTTATTGCTTATTATC+TGG | - | chr3.2:65179326-65179345 | MS.gene99877:intron | 25.0% |
| ! | ATGTATTGAATAAGGTTAGT+TGG | - | chr3.2:65179687-65179706 | MS.gene99877:intron | 25.0% |
| ! | ATGTTTCATCATTACTACAT+AGG | + | chr3.2:65180871-65180890 | None:intergenic | 25.0% |
| ! | ATTAGCAGCAACAATTATTT+GGG | + | chr3.2:65181127-65181146 | None:intergenic | 25.0% |
| ! | ATTAGTAAATAGCAATACTG+AGG | - | chr3.2:65180819-65180838 | MS.gene99877:intron | 25.0% |
| ! | ATTGTTAGAAATCTCAAACT+TGG | - | chr3.2:65179779-65179798 | MS.gene99877:CDS | 25.0% |
| ! | CAAAAATTGTACCATTGAAT+TGG | + | chr3.2:65177962-65177981 | None:intergenic | 25.0% |
| ! | GAAGAATGAGAAAGAATTTA+TGG | + | chr3.2:65181242-65181261 | None:intergenic | 25.0% |
| ! | GATCAAAATAACATTAGTGT+TGG | - | chr3.2:65178857-65178876 | MS.gene99877:intron | 25.0% |
| ! | GTGTAAAAGTTCAGAAAAAA+GGG | - | chr3.2:65179109-65179128 | MS.gene99877:intron | 25.0% |
| ! | TTGAATGATAAGTTACAAGA+TGG | - | chr3.2:65178459-65178478 | MS.gene99877:intron | 25.0% |
| !! | AAGTTTGAGATTTCTAACAA+TGG | + | chr3.2:65179780-65179799 | None:intergenic | 25.0% |
| !! | AGTACAACTTGGAATTATTT+TGG | - | chr3.2:65181085-65181104 | MS.gene99877:intron | 25.0% |
| !! | ATCTACTATAGTTTGAGTTA+TGG | - | chr3.2:65180350-65180369 | MS.gene99877:intron | 25.0% |
| !! | ATTTTCCTTTTCAAAGATGT+GGG | - | chr3.2:65180990-65181009 | MS.gene99877:intron | 25.0% |
| !! | TATTTTCCTTTTCAAAGATG+TGG | - | chr3.2:65180989-65181008 | MS.gene99877:intron | 25.0% |
| !! | TGCTGATAATGTATTGAATA+AGG | - | chr3.2:65179679-65179698 | MS.gene99877:intron | 25.0% |
| !! | TGTAATTGATGATTGAAGTA+TGG | - | chr3.2:65178411-65178430 | MS.gene99877:intron | 25.0% |
| !!! | AAAATAACATTAGTGTTGGT+AGG | - | chr3.2:65178861-65178880 | MS.gene99877:intron | 25.0% |
| !!! | ACTACATGAGAAAGTATTAA+AGG | - | chr3.2:65179534-65179553 | MS.gene99877:CDS | 25.0% |
| !!! | AGTTTTAAAGGTCAAGTTAA+TGG | - | chr3.2:65181024-65181043 | MS.gene99877:intron | 25.0% |
| !!! | CTTGTTTTCAGAAATTTAAG+CGG | - | chr3.2:65178038-65178057 | MS.gene99877:intron | 25.0% |
| AACTTTCTGTAATCAACTTG+AGG | - | chr3.2:65181687-65181706 | MS.gene99877:intron | 30.0% | |
| AAGAAACAACATCAAACACA+TGG | + | chr3.2:65178261-65178280 | None:intergenic | 30.0% | |
| AAGTCTTGACAGGAAAAATA+TGG | - | chr3.2:65180099-65180118 | MS.gene99877:intron | 30.0% | |
| ACAAAAAACACAGATACTAC+TGG | - | chr3.2:65178960-65178979 | MS.gene99877:intron | 30.0% | |
| AGAGAAAATGCTGCAAATTA+AGG | + | chr3.2:65179839-65179858 | None:intergenic | 30.0% | |
| AGTTATGCAAATTGAGTTTC+TGG | - | chr3.2:65178693-65178712 | MS.gene99877:intron | 30.0% | |
| ATAACATTTCTATGCAGGAA+AGG | - | chr3.2:65179610-65179629 | MS.gene99877:CDS | 30.0% | |
| ATAGAGTATACAAGAAGACA+AGG | - | chr3.2:65179177-65179196 | MS.gene99877:intron | 30.0% | |
| ATGCAATATGTGAATTGATC+TGG | - | chr3.2:65178742-65178761 | MS.gene99877:intron | 30.0% | |
| ATGGATGGAACAACAATTAA+AGG | - | chr3.2:65179500-65179519 | MS.gene99877:intron | 30.0% | |
| ATGTACTTGAGTATGTTTCA+TGG | + | chr3.2:65181487-65181506 | None:intergenic | 30.0% | |
| CAAATAATTGTTGCTGCTAA+TGG | - | chr3.2:65181126-65181145 | MS.gene99877:CDS | 30.0% | |
| CATTAGCAGCAACAATTATT+TGG | + | chr3.2:65181128-65181147 | None:intergenic | 30.0% | |
| CTTATTATCTGGTAACTGAA+TGG | - | chr3.2:65179337-65179356 | MS.gene99877:intron | 30.0% | |
| GAAAGGTTAATGCTTAATAC+AGG | - | chr3.2:65179656-65179675 | MS.gene99877:intron | 30.0% | |
| GATTATTGAGATGTTGCATT+TGG | - | chr3.2:65181171-65181190 | MS.gene99877:CDS | 30.0% | |
| GCTATTATTTAGTGTCTTGA+TGG | - | chr3.2:65179962-65179981 | MS.gene99877:intron | 30.0% | |
| GGTGTAAAAGTTCAGAAAAA+AGG | - | chr3.2:65179108-65179127 | MS.gene99877:intron | 30.0% | |
| GTTGTATAACATTTCTATGC+AGG | - | chr3.2:65179605-65179624 | MS.gene99877:CDS | 30.0% | |
| TCTTGCACGAAAAGTTTATT+GGG | + | chr3.2:65178148-65178167 | None:intergenic | 30.0% | |
| TTAGCAGCAACAATTATTTG+GGG | + | chr3.2:65181126-65181145 | None:intergenic | 30.0% | |
| TTTCAGAAATTTAAGCGGTT+GGG | - | chr3.2:65178043-65178062 | MS.gene99877:intron | 30.0% | |
| TTTCTTCAATTTCAGGCTAT+TGG | - | chr3.2:65178275-65178294 | MS.gene99877:CDS | 30.0% | |
| ! | AACTGAATGGAATTTGTTTC+AGG | - | chr3.2:65179350-65179369 | MS.gene99877:intron | 30.0% |
| ! | AGACAAACTTTTACAACTGT+TGG | - | chr3.2:65179243-65179262 | MS.gene99877:intron | 30.0% |
| ! | ATGTTTCCACAGCTAATTTT+CGG | - | chr3.2:65181207-65181226 | MS.gene99877:CDS | 30.0% |
| ! | GAGTTATGGTCAGTATATTT+TGG | - | chr3.2:65180364-65180383 | MS.gene99877:intron | 30.0% |
| ! | TTTTCAGAAATTTAAGCGGT+TGG | - | chr3.2:65178042-65178061 | MS.gene99877:intron | 30.0% |
| ! | TTTTGGCATTTAGAAACTGA+TGG | - | chr3.2:65181603-65181622 | MS.gene99877:CDS | 30.0% |
| !! | ATTTAGTTCTAGCCATAAAG+AGG | + | chr3.2:65180507-65180526 | None:intergenic | 30.0% |
| !! | GATGAATTTGGTTCTCTTAA+TGG | - | chr3.2:65178109-65178128 | MS.gene99877:intron | 30.0% |
| !! | GATGTTGTTTCTTCAATTTC+AGG | - | chr3.2:65178268-65178287 | MS.gene99877:CDS | 30.0% |
| !! | GGAAGGATTTGAAACTTTTA+GGG | - | chr3.2:65178310-65178329 | MS.gene99877:CDS | 30.0% |
| !! | TTATGGTCTTATCTTCTCTT+GGG | - | chr3.2:65178524-65178543 | MS.gene99877:intron | 30.0% |
| !! | TTTTTAGGCAATTGTTACAG+AGG | - | chr3.2:65180598-65180617 | MS.gene99877:intron | 30.0% |
| !!! | GATTGCCTTATTCGTTTTTT+AGG | - | chr3.2:65180583-65180602 | MS.gene99877:intron | 30.0% |
| !!! | TGAGTTTTGACTTAAGATTG+TGG | + | chr3.2:65178990-65179009 | None:intergenic | 30.0% |
| !!! | TTTCAGGTTGGTAACATTTT+GGG | - | chr3.2:65180157-65180176 | MS.gene99877:intron | 30.0% |
| AAAACCTGCAGGTATGATTT+GGG | - | chr3.2:65181632-65181651 | MS.gene99877:intron | 35.0% | |
| AAAATGCCTTGTAGCTTGAT+CGG | - | chr3.2:65181297-65181316 | MS.gene99877:intron | 35.0% | |
| ATCTTCAAAAACCACACACT+TGG | + | chr3.2:65181330-65181349 | None:intergenic | 35.0% | |
| ATTGCAATGAAACACAAGCA+TGG | - | chr3.2:65178774-65178793 | MS.gene99877:intron | 35.0% | |
| CGAATAAGGCAATCGAAAAA+TGG | + | chr3.2:65180577-65180596 | None:intergenic | 35.0% | |
| CTCTTGCACGAAAAGTTTAT+TGG | + | chr3.2:65178149-65178168 | None:intergenic | 35.0% | |
| CTGAAGATGCTGATATTGAA+AGG | - | chr3.2:65179639-65179658 | MS.gene99877:CDS | 35.0% | |
| CTTACCACATCAACTTTCAA+CGG | + | chr3.2:65178344-65178363 | None:intergenic | 35.0% | |
| CTTTCAATATCAGCATCTTC+AGG | + | chr3.2:65179641-65179660 | None:intergenic | 35.0% | |
| GGCAAATTCATGATTGTGTT+AGG | + | chr3.2:65180556-65180575 | None:intergenic | 35.0% | |
| TAACAAGGGCTCTACATTTA+TGG | - | chr3.2:65181721-65181740 | MS.gene99877:CDS | 35.0% | |
| TAATAAGGAAGAAAGTGAGC+TGG | - | chr3.2:65179860-65179879 | MS.gene99877:intron | 35.0% | |
| TACAGAAAGTTCACTGAAGT+TGG | + | chr3.2:65181678-65181697 | None:intergenic | 35.0% | |
| TAGAGTTTCCTAGTACAACT+TGG | - | chr3.2:65181074-65181093 | MS.gene99877:intron | 35.0% | |
| TAGATAAGAATCCTCCCAAA+AGG | - | chr3.2:65181762-65181781 | MS.gene99877:CDS | 35.0% | |
| TATCTTCTCTTGGGATAATG+TGG | - | chr3.2:65178533-65178552 | MS.gene99877:intron | 35.0% | |
| TGATTGAGTTTGTACTGTGT+AGG | - | chr3.2:65179442-65179461 | MS.gene99877:intron | 35.0% | |
| TGTTCAGTGCAAACTAAGAT+GGG | - | chr3.2:65180957-65180976 | MS.gene99877:intron | 35.0% | |
| TTCAGAAATTTAAGCGGTTG+GGG | - | chr3.2:65178044-65178063 | MS.gene99877:intron | 35.0% | |
| TTGTTCAGTGCAAACTAAGA+TGG | - | chr3.2:65180956-65180975 | MS.gene99877:intron | 35.0% | |
| TTTCACGAGTAAATCCAACT+TGG | - | chr3.2:65180481-65180500 | MS.gene99877:intron | 35.0% | |
| ! | CAATAAACTTTTCGTGCAAG+AGG | - | chr3.2:65178147-65178166 | MS.gene99877:intron | 35.0% |
| ! | CAGTATTTCTGTGTCTGTAT+TGG | - | chr3.2:65179087-65179106 | MS.gene99877:intron | 35.0% |
| ! | GCAGCATTTTCTCTCTAATA+AGG | - | chr3.2:65179845-65179864 | MS.gene99877:intron | 35.0% |
| ! | TCTATTCCAAGTCTCCTTTT+GGG | + | chr3.2:65181779-65181798 | None:intergenic | 35.0% |
| ! | TCTTGTAGTTTGAAGTCGAA+GGG | - | chr3.2:65180906-65180925 | MS.gene99877:intron | 35.0% |
| ! | TGTTTCCACAGCTAATTTTC+GGG | - | chr3.2:65181208-65181227 | MS.gene99877:CDS | 35.0% |
| ! | TTCTTGTAGTTTGAAGTCGA+AGG | - | chr3.2:65180905-65180924 | MS.gene99877:intron | 35.0% |
| !! | ATCAAGCTACAAGGCATTTT+AGG | + | chr3.2:65181297-65181316 | None:intergenic | 35.0% |
| !! | CTTATGGTCTTATCTTCTCT+TGG | - | chr3.2:65178523-65178542 | MS.gene99877:intron | 35.0% |
| !! | GCTTTTAACTGACGTGATAT+GGG | + | chr3.2:65180213-65180232 | None:intergenic | 35.0% |
| !! | GGGAAGGATTTGAAACTTTT+AGG | - | chr3.2:65178309-65178328 | MS.gene99877:CDS | 35.0% |
| !! | TGCTTTTAACTGACGTGATA+TGG | + | chr3.2:65180214-65180233 | None:intergenic | 35.0% |
| !! | TTATGTAGTTTGTTGAGTGC+TGG | - | chr3.2:65180320-65180339 | MS.gene99877:intron | 35.0% |
| !!! | CTTTCAGGTTGGTAACATTT+TGG | - | chr3.2:65180156-65180175 | MS.gene99877:intron | 35.0% |
| !!! | GCTGAGTGATGTAGTTTTAA+AGG | - | chr3.2:65181012-65181031 | MS.gene99877:intron | 35.0% |
| !!! | TGATTTTTAGCATGCCCTTT+TGG | - | chr3.2:65179477-65179496 | MS.gene99877:intron | 35.0% |
| !!! | TTGCATTTGGTGTCTTTTGT+GGG | - | chr3.2:65181184-65181203 | MS.gene99877:CDS | 35.0% |
| !!! | TTTGAAACTTTTAGGGCAGA+TGG | - | chr3.2:65178317-65178336 | MS.gene99877:CDS | 35.0% |
| AAACCTGCAGGTATGATTTG+GGG | - | chr3.2:65181633-65181652 | MS.gene99877:intron | 40.0% | |
| AAGACTTGAAACAACAGCAC+AGG | + | chr3.2:65180086-65180105 | None:intergenic | 40.0% | |
| AATCCAACTTGGCCTCTTTA+TGG | - | chr3.2:65180492-65180511 | MS.gene99877:intron | 40.0% | |
| ACTAGGAAACTCTAGCTATC+AGG | + | chr3.2:65181068-65181087 | None:intergenic | 40.0% | |
| ACTTCTGGGTCTGATGAATT+TGG | - | chr3.2:65178097-65178116 | MS.gene99877:intron | 40.0% | |
| AGACTTGAAACAACAGCACA+GGG | + | chr3.2:65180085-65180104 | None:intergenic | 40.0% | |
| ATAAGACCATAAGCCTCATC+TGG | + | chr3.2:65178516-65178535 | None:intergenic | 40.0% | |
| ATAGCCATCGCAACAAATCA+AGG | + | chr3.2:65179947-65179966 | None:intergenic | 40.0% | |
| ATGAAACACAAGCATGGACA+CGG | - | chr3.2:65178780-65178799 | MS.gene99877:intron | 40.0% | |
| ATTTCTTTCTGCTGCTGTCA+AGG | - | chr3.2:65180649-65180668 | MS.gene99877:intron | 40.0% | |
| ATTTGCCCGAAAATTAGCTG+TGG | + | chr3.2:65181216-65181235 | None:intergenic | 40.0% | |
| CAATTGTTACAGAGGAGGAT+GGG | - | chr3.2:65180606-65180625 | MS.gene99877:intron | 40.0% | |
| CACGCTTGCTTCGTAAATAT+AGG | - | chr3.2:65180761-65180780 | MS.gene99877:intron | 40.0% | |
| GAAAACCTGCAGGTATGATT+TGG | - | chr3.2:65181631-65181650 | MS.gene99877:intron | 40.0% | |
| GAGAAGATTGAAGACGAGAA+GGG | + | chr3.2:65177933-65177952 | None:intergenic | 40.0% | |
| GATGGATAATGAAAACCTGC+AGG | - | chr3.2:65181621-65181640 | MS.gene99877:intron | 40.0% | |
| GATTAACATACCCTCTTCAG+AGG | + | chr3.2:65179418-65179437 | None:intergenic | 40.0% | |
| GTAGAAGCTTTGCAACGAAT+GGG | - | chr3.2:65180121-65180140 | MS.gene99877:intron | 40.0% | |
| GTTGTTCCATCCATCCAAAA+GGG | + | chr3.2:65179494-65179513 | None:intergenic | 40.0% | |
| TAATTACCCGTTGCACTTCT+GGG | - | chr3.2:65178083-65178102 | MS.gene99877:intron | 40.0% | |
| TAGAAGCTTTGCAACGAATG+GGG | - | chr3.2:65180122-65180141 | MS.gene99877:intron | 40.0% | |
| TAGCTTGAAAGACCAATGGA+GGG | - | chr3.2:65180019-65180038 | MS.gene99877:CDS | 40.0% | |
| TCAAAAACCACACACTTGGA+AGG | + | chr3.2:65181326-65181345 | None:intergenic | 40.0% | |
| TCTGCAATTGGAGAAAGTAG+TGG | + | chr3.2:65177881-65177900 | None:intergenic | 40.0% | |
| TGTACCATTGAATTGGGAGA+AGG | + | chr3.2:65177955-65177974 | None:intergenic | 40.0% | |
| TGTACTGTGTAGGACTTAGA+TGG | - | chr3.2:65179452-65179471 | MS.gene99877:intron | 40.0% | |
| TGTTGTTCCATCCATCCAAA+AGG | + | chr3.2:65179495-65179514 | None:intergenic | 40.0% | |
| TTAATTACCCGTTGCACTTC+TGG | - | chr3.2:65178082-65178101 | MS.gene99877:intron | 40.0% | |
| TTAGGCAATTGTTACAGAGG+AGG | - | chr3.2:65180601-65180620 | MS.gene99877:intron | 40.0% | |
| TTCTCCTTCTCCCAATTCAA+TGG | - | chr3.2:65177948-65177967 | MS.gene99877:CDS | 40.0% | |
| ! | AGGAGACTGTTTGCTAACAA+GGG | - | chr3.2:65181707-65181726 | MS.gene99877:intron | 40.0% |
| ! | ATGAGAAGTAGCTCTGCAAT+TGG | + | chr3.2:65177893-65177912 | None:intergenic | 40.0% |
| ! | CACGTCAGTTAAAAGCATGT+TGG | - | chr3.2:65180217-65180236 | MS.gene99877:intron | 40.0% |
| ! | CGACACTGACACATAGATTT+TGG | - | chr3.2:65178812-65178831 | MS.gene99877:intron | 40.0% |
| ! | CTCGATAAGTACTTTCAGGT+TGG | - | chr3.2:65180145-65180164 | MS.gene99877:intron | 40.0% |
| ! | GTCTATTCCAAGTCTCCTTT+TGG | + | chr3.2:65181780-65181799 | None:intergenic | 40.0% |
| ! | TGTCTAGCTTGAAAGACCAA+TGG | - | chr3.2:65180015-65180034 | MS.gene99877:CDS | 40.0% |
| ! | TTTTAGCATGCCCTTTTGGA+TGG | - | chr3.2:65179481-65179500 | MS.gene99877:intron | 40.0% |
| !! | AGGCTATTGGTGCTGAATAT+GGG | - | chr3.2:65178288-65178307 | MS.gene99877:CDS | 40.0% |
| !! | ATGATGGCTGTAGCATTGAT+TGG | - | chr3.2:65181386-65181405 | MS.gene99877:intron | 40.0% |
| !! | CACCTCAATAATGTCGCTTT+CGG | + | chr3.2:65181152-65181171 | None:intergenic | 40.0% |
| !! | CGTTGAAAGTTGATGTGGTA+AGG | - | chr3.2:65178342-65178361 | MS.gene99877:CDS | 40.0% |
| !! | CTGTTGTTTCAAGTCTTGAC+AGG | - | chr3.2:65180089-65180108 | MS.gene99877:intron | 40.0% |
| !! | GAAGTCGAAGGGTATTATGA+GGG | - | chr3.2:65180917-65180936 | MS.gene99877:intron | 40.0% |
| !! | GTTTCCTTGATTTGTTGCGA+TGG | - | chr3.2:65179940-65179959 | MS.gene99877:intron | 40.0% |
| !! | TGAAGTCGAAGGGTATTATG+AGG | - | chr3.2:65180916-65180935 | MS.gene99877:intron | 40.0% |
| !!! | GTTGCATTTGGTGTCTTTTG+TGG | - | chr3.2:65181183-65181202 | MS.gene99877:CDS | 40.0% |
| AATCCTCCCAAAAGGAGACT+TGG | - | chr3.2:65181770-65181789 | MS.gene99877:CDS | 45.0% | |
| ACTCAAAGAGCAGAAGATCC+TGG | - | chr3.2:65180277-65180296 | MS.gene99877:CDS | 45.0% | |
| AGCTGGATAGACTGAAGTTG+AGG | - | chr3.2:65179877-65179896 | MS.gene99877:intron | 45.0% | |
| AGGTTTCCGATCAAGCTACA+AGG | + | chr3.2:65181306-65181325 | None:intergenic | 45.0% | |
| ATGAAGCCAGATGAGGCTTA+TGG | - | chr3.2:65178507-65178526 | MS.gene99877:intron | 45.0% | |
| CTAGCTTGAAAGACCAATGG+AGG | - | chr3.2:65180018-65180037 | MS.gene99877:CDS | 45.0% | |
| CTATGCTATGAAGCCAGATG+AGG | - | chr3.2:65178500-65178519 | MS.gene99877:intron | 45.0% | |
| CTTCTCTTGGGATAATGTGG+TGG | - | chr3.2:65178536-65178555 | MS.gene99877:intron | 45.0% | |
| GAAATTTAAGCGGTTGGGGT+TGG | - | chr3.2:65178048-65178067 | MS.gene99877:intron | 45.0% | |
| GACTTGAAACAACAGCACAG+GGG | + | chr3.2:65180084-65180103 | None:intergenic | 45.0% | |
| GCAATTGTTACAGAGGAGGA+TGG | - | chr3.2:65180605-65180624 | MS.gene99877:intron | 45.0% | |
| GGAGAAGATTGAAGACGAGA+AGG | + | chr3.2:65177934-65177953 | None:intergenic | 45.0% | |
| GGGCTCTACATTTATGGACT+TGG | - | chr3.2:65181727-65181746 | MS.gene99877:CDS | 45.0% | |
| GGTAGAAGCTTTGCAACGAA+TGG | - | chr3.2:65180120-65180139 | MS.gene99877:intron | 45.0% | |
| TAGCCATAAAGAGGCCAAGT+TGG | + | chr3.2:65180498-65180517 | None:intergenic | 45.0% | |
| TGAAACACAAGCATGGACAC+GGG | - | chr3.2:65178781-65178800 | MS.gene99877:intron | 45.0% | |
| TGCGCACAATTGCACAATGA+TGG | - | chr3.2:65181370-65181389 | MS.gene99877:CDS | 45.0% | |
| TTGTCTCACTTCCACAAGCA+AGG | + | chr3.2:65179229-65179248 | None:intergenic | 45.0% | |
| ! | AACCAACTTGCCTCTGAAGA+GGG | - | chr3.2:65179405-65179424 | MS.gene99877:intron | 45.0% |
| ! | ATTCCAAGTCTCCTTTTGGG+AGG | + | chr3.2:65181776-65181795 | None:intergenic | 45.0% |
| ! | CTCAGCCCACATCTTTGAAA+AGG | + | chr3.2:65180998-65181017 | None:intergenic | 45.0% |
| ! | GAGGAGACTGTTTGCTAACA+AGG | - | chr3.2:65181706-65181725 | MS.gene99877:intron | 45.0% |
| !! | ATTGGTGCTGAATATGGGGA+AGG | - | chr3.2:65178293-65178312 | MS.gene99877:CDS | 45.0% |
| !! | CAGGCTATTGGTGCTGAATA+TGG | - | chr3.2:65178287-65178306 | MS.gene99877:CDS | 45.0% |
| !! | GGCTATTGGTGCTGAATATG+GGG | - | chr3.2:65178289-65178308 | MS.gene99877:CDS | 45.0% |
| !! | GGTTGGGGTTGGTTAAGAAT+CGG | - | chr3.2:65178059-65178078 | MS.gene99877:intron | 45.0% |
| !! | TGGACCGTTGAAAGTTGATG+TGG | - | chr3.2:65178337-65178356 | MS.gene99877:CDS | 45.0% |
| CGTCACATGCTCACATCACA+TGG | - | chr3.2:65178624-65178643 | MS.gene99877:intron | 50.0% | |
| CTCAGAGCCACGTGTAATCT+AGG | + | chr3.2:65178940-65178959 | None:intergenic | 50.0% | |
| GGCCGAAAGCGACATTATTG+AGG | - | chr3.2:65181147-65181166 | MS.gene99877:CDS | 50.0% | |
| GGGGCTCGATAAGTACTTTC+AGG | - | chr3.2:65180141-65180160 | MS.gene99877:intron | 50.0% | |
| TACCCTCTTCAGAGGCAAGT+TGG | + | chr3.2:65179410-65179429 | None:intergenic | 50.0% | |
| TCGGAAACCTTCCAAGTGTG+TGG | - | chr3.2:65181316-65181335 | MS.gene99877:intron | 50.0% | |
| TGTCAGTGCTTCCTTGCTTG+TGG | - | chr3.2:65179215-65179234 | MS.gene99877:intron | 50.0% | |
| TGTCCAGCACATGCTAGTGT+CGG | + | chr3.2:65178890-65178909 | None:intergenic | 50.0% | |
| TGTTACAGAGGAGGATGGGA+TGG | - | chr3.2:65180610-65180629 | MS.gene99877:intron | 50.0% | |
| TTGCCCCAAATCATACCTGC+AGG | + | chr3.2:65181639-65181658 | None:intergenic | 50.0% | |
| ! | ACGTCTTCGGTCTGAAGTGT+CGG | - | chr3.2:65178909-65178928 | MS.gene99877:intron | 50.0% |
| ! | AGCATGCCCTTTTGGATGGA+TGG | - | chr3.2:65179485-65179504 | MS.gene99877:intron | 50.0% |
| ! | ATCAGACCCAGAAGTGCAAC+GGG | + | chr3.2:65178092-65178111 | None:intergenic | 50.0% |
| ! | CATCAGACCCAGAAGTGCAA+CGG | + | chr3.2:65178093-65178112 | None:intergenic | 50.0% |
| ! | CTTGAGAGACTGGTTGGAAG+CGG | - | chr3.2:65180042-65180061 | MS.gene99877:intron | 50.0% |
| ! | GAACCAACTTGCCTCTGAAG+AGG | - | chr3.2:65179404-65179423 | MS.gene99877:intron | 50.0% |
| ! | GGTGCTACCTAGATTACACG+TGG | - | chr3.2:65178930-65178949 | MS.gene99877:intron | 50.0% |
| !! | CTGATACTCGAGCTCTGAAG+AGG | - | chr3.2:65179373-65179392 | MS.gene99877:intron | 50.0% |
| !! | TACTCGAGCTCTGAAGAGGA+AGG | - | chr3.2:65179377-65179396 | MS.gene99877:intron | 50.0% |
| AGACGAGAAGGGTGAGAGAG+AGG | + | chr3.2:65177922-65177941 | None:intergenic | 55.0% | |
| CAATGGAGGGCTTGAGAGAC+TGG | - | chr3.2:65180032-65180051 | MS.gene99877:CDS | 55.0% | |
| CAGTCTCTCAAGCCCTCCAT+TGG | + | chr3.2:65180034-65180053 | None:intergenic | 55.0% | |
| GCATGTGCTGGACACGTCTT+CGG | - | chr3.2:65178896-65178915 | MS.gene99877:intron | 55.0% | |
| TGTCCGACACTAGCATGTGC+TGG | - | chr3.2:65178884-65178903 | MS.gene99877:intron | 55.0% | |
| !! | GAGCTCTGAAGAGGAAGGCA+TGG | - | chr3.2:65179382-65179401 | MS.gene99877:intron | 55.0% |
| GGAGGGCTTGAGAGACTGGT+TGG | - | chr3.2:65180036-65180055 | MS.gene99877:CDS | 60.0% | |
| TGCGCAGCAGTTACTGCTCG+AGG | + | chr3.2:65181356-65181375 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 65177871 | 65181811 | 65177871 | ID=MS.gene99877 |
| chr3.2 | mRNA | 65177871 | 65181811 | 65177871 | ID=MS.gene99877.t1;Parent=MS.gene99877 |
| chr3.2 | exon | 65181713 | 65181811 | 65181713 | ID=MS.gene99877.t1.exon1;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65181713 | 65181811 | 65181713 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65181514 | 65181633 | 65181514 | ID=MS.gene99877.t1.exon2;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65181514 | 65181633 | 65181514 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65181324 | 65181392 | 65181324 | ID=MS.gene99877.t1.exon3;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65181324 | 65181392 | 65181324 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65181125 | 65181229 | 65181125 | ID=MS.gene99877.t1.exon4;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65181125 | 65181229 | 65181125 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65180256 | 65180310 | 65180256 | ID=MS.gene99877.t1.exon5;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65180256 | 65180310 | 65180256 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65179982 | 65180055 | 65179982 | ID=MS.gene99877.t1.exon6;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65179982 | 65180055 | 65179982 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65179750 | 65179833 | 65179750 | ID=MS.gene99877.t1.exon7;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65179750 | 65179833 | 65179750 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65179520 | 65179660 | 65179520 | ID=MS.gene99877.t1.exon8;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65179520 | 65179660 | 65179520 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65179012 | 65179077 | 65179012 | ID=MS.gene99877.t1.exon9;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65179012 | 65179077 | 65179012 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65178262 | 65178371 | 65178262 | ID=MS.gene99877.t1.exon10;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65178262 | 65178371 | 65178262 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| chr3.2 | exon | 65177871 | 65178039 | 65177871 | ID=MS.gene99877.t1.exon11;Parent=MS.gene99877.t1 |
| chr3.2 | CDS | 65177871 | 65178039 | 65177871 | ID=cds.MS.gene99877.t1;Parent=MS.gene99877.t1 |
| Gene Sequence |
| Protein sequence |
