Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31116.t1 | AES67650.2 | 78.4 | 273 | 47 | 3 | 1 | 267 | 6 | 272 | 9.50E-103 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31116.t1 | A8FFD1 | 56.3 | 71 | 26 | 1 | 67 | 132 | 7 | 77 | 6.0e-13 | 76.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31116.t1 | G7IRX6 | 78.4 | 273 | 47 | 3 | 1 | 267 | 6 | 272 | 6.8e-103 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene31116 | 0.826666 | 2.39E-54 | -1.69E-46 |
| MS.gene049151 | MS.gene31116 | 0.813979 | 1.95E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene31116 | 0.826569 | 2.52E-54 | -1.69E-46 |
| MS.gene049170 | MS.gene31116 | 0.818387 | 2.01E-52 | -1.69E-46 |
| MS.gene049230 | MS.gene31116 | 0.885328 | 8.94E-72 | -1.69E-46 |
| MS.gene049297 | MS.gene31116 | 0.812919 | 3.33E-51 | -1.69E-46 |
| MS.gene04933 | MS.gene31116 | 0.815231 | 1.03E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene31116 | 0.925459 | 1.78E-90 | -1.69E-46 |
| MS.gene049669 | MS.gene31116 | 0.820504 | 6.62E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene31116 | 0.846977 | 1.55E-59 | -1.69E-46 |
| MS.gene04984 | MS.gene31116 | 0.812333 | 4.47E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene31116 | 0.860345 | 2.20E-63 | -1.69E-46 |
| MS.gene049915 | MS.gene31116 | 0.830841 | 2.34E-55 | -1.69E-46 |
| MS.gene04991 | MS.gene31116 | -0.843697 | 1.19E-58 | -1.69E-46 |
| MS.gene050226 | MS.gene31116 | 0.884584 | 1.69E-71 | -1.69E-46 |
| MS.gene050227 | MS.gene31116 | 0.897317 | 1.58E-76 | -1.69E-46 |
| MS.gene050228 | MS.gene31116 | 0.894463 | 2.41E-75 | -1.69E-46 |
| MS.gene050330 | MS.gene31116 | -0.840487 | 8.44E-58 | -1.69E-46 |
| MS.gene050398 | MS.gene31116 | 0.807768 | 4.30E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene31116 | -0.836648 | 8.27E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene31116 | 0.826219 | 3.06E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene31116 | -0.905654 | 3.41E-80 | -1.69E-46 |
| MS.gene050642 | MS.gene31116 | 0.901485 | 2.56E-78 | -1.69E-46 |
| MS.gene050719 | MS.gene31116 | 0.802474 | 5.51E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene31116 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene31116 | 0.831569 | 1.55E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene31116 | 0.823503 | 1.34E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene31116 | 0.826717 | 2.33E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene31116 | 0.833183 | 6.17E-56 | -1.69E-46 |
| MS.gene050953 | MS.gene31116 | 0.831182 | 1.93E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene31116 | 0.805305 | 1.42E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene31116 | -0.827811 | 1.27E-54 | -1.69E-46 |
| MS.gene051373 | MS.gene31116 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene051452 | MS.gene31116 | 0.809551 | 1.79E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene31116 | 0.830355 | 3.08E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene31116 | 0.85013 | 2.07E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene31116 | 0.913531 | 5.53E-84 | -1.69E-46 |
| MS.gene052011 | MS.gene31116 | -0.823361 | 1.44E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene31116 | 0.945847 | 1.42E-104 | -1.69E-46 |
| MS.gene052176 | MS.gene31116 | 0.88569 | 6.54E-72 | -1.69E-46 |
| MS.gene052188 | MS.gene31116 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene31116 | 0.811532 | 6.68E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene31116 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene31116 | -0.854868 | 9.24E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene31116 | 0.836621 | 8.40E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene31116 | 0.826667 | 2.39E-54 | -1.69E-46 |
| MS.gene052389 | MS.gene31116 | 0.898175 | 6.86E-77 | -1.69E-46 |
| MS.gene052420 | MS.gene31116 | 0.868451 | 6.47E-66 | -1.69E-46 |
| MS.gene052426 | MS.gene31116 | 0.819624 | 1.05E-52 | -1.69E-46 |
| MS.gene052464 | MS.gene31116 | 0.820054 | 8.40E-53 | -1.69E-46 |
| MS.gene052586 | MS.gene31116 | 0.802351 | 5.85E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene31116 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene053216 | MS.gene31116 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene31116 | 0.844666 | 6.56E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene31116 | 0.806872 | 6.66E-50 | -1.69E-46 |
| MS.gene053577 | MS.gene31116 | 0.808109 | 3.64E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene31116 | 0.872843 | 2.33E-67 | -1.69E-46 |
| MS.gene054083 | MS.gene31116 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene054098 | MS.gene31116 | 0.812986 | 3.22E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene31116 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene31116 | 0.845493 | 3.93E-59 | -1.69E-46 |
| MS.gene054379 | MS.gene31116 | 0.844477 | 7.38E-59 | -1.69E-46 |
| MS.gene054405 | MS.gene31116 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene31116 | 0.821194 | 4.60E-53 | -1.69E-46 |
| MS.gene054542 | MS.gene31116 | 0.827405 | 1.59E-54 | -1.69E-46 |
| MS.gene054826 | MS.gene31116 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene31116 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene31116 | 0.919964 | 2.33E-87 | -1.69E-46 |
| MS.gene054942 | MS.gene31116 | 0.819051 | 1.42E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene31116 | 0.851718 | 7.40E-61 | -1.69E-46 |
| MS.gene05510 | MS.gene31116 | 0.834829 | 2.39E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene31116 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene31116 | 0.854662 | 1.06E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene31116 | 0.889984 | 1.48E-73 | -1.69E-46 |
| MS.gene055859 | MS.gene31116 | 0.815804 | 7.66E-52 | -1.69E-46 |
| MS.gene05595 | MS.gene31116 | 0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene056087 | MS.gene31116 | 0.843225 | 1.60E-58 | -1.69E-46 |
| MS.gene056447 | MS.gene31116 | 0.816418 | 5.59E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene31116 | 0.839205 | 1.82E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene31116 | 0.809693 | 1.67E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene31116 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene31116 | 0.906491 | 1.40E-80 | -1.69E-46 |
| MS.gene057026 | MS.gene31116 | 0.805042 | 1.62E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene31116 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene31116 | -0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene31116 | 0.830846 | 2.33E-55 | -1.69E-46 |
| MS.gene05761 | MS.gene31116 | 0.884678 | 1.56E-71 | -1.69E-46 |
| MS.gene057750 | MS.gene31116 | 0.824003 | 1.02E-53 | -1.69E-46 |
| MS.gene057754 | MS.gene31116 | 0.817122 | 3.88E-52 | -1.69E-46 |
| MS.gene057929 | MS.gene31116 | 0.804211 | 2.41E-49 | -1.69E-46 |
| MS.gene057967 | MS.gene31116 | 0.815365 | 9.60E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene31116 | 0.813834 | 2.09E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene31116 | 0.800071 | 1.71E-48 | -1.69E-46 |
| MS.gene058139 | MS.gene31116 | 0.852274 | 5.14E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene31116 | 0.859283 | 4.60E-63 | -1.69E-46 |
| MS.gene058146 | MS.gene31116 | 0.826272 | 2.97E-54 | -1.69E-46 |
| MS.gene058371 | MS.gene31116 | 0.802871 | 4.57E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene31116 | 0.816275 | 6.01E-52 | -1.69E-46 |
| MS.gene058435 | MS.gene31116 | 0.850866 | 1.29E-60 | -1.69E-46 |
| MS.gene058503 | MS.gene31116 | 0.815075 | 1.11E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene31116 | 0.885502 | 7.70E-72 | -1.69E-46 |
| MS.gene058749 | MS.gene31116 | 0.837293 | 5.66E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene31116 | 0.818144 | 2.29E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene31116 | 0.843041 | 1.79E-58 | -1.69E-46 |
| MS.gene059285 | MS.gene31116 | 0.878386 | 2.93E-69 | -1.69E-46 |
| MS.gene059420 | MS.gene31116 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene059511 | MS.gene31116 | 0.863805 | 1.91E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene31116 | 0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene31116 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene31116 | 0.855179 | 7.50E-62 | -1.69E-46 |
| MS.gene059894 | MS.gene31116 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene059899 | MS.gene31116 | 0.825065 | 5.74E-54 | -1.69E-46 |
| MS.gene060084 | MS.gene31116 | 0.84373 | 1.17E-58 | -1.69E-46 |
| MS.gene060297 | MS.gene31116 | 0.860059 | 2.69E-63 | -1.69E-46 |
| MS.gene060495 | MS.gene31116 | 0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene31116 | 0.859841 | 3.13E-63 | -1.69E-46 |
| MS.gene060685 | MS.gene31116 | 0.852257 | 5.20E-61 | -1.69E-46 |
| MS.gene060802 | MS.gene31116 | 0.82789 | 1.22E-54 | -1.69E-46 |
| MS.gene060879 | MS.gene31116 | 0.82906 | 6.36E-55 | -1.69E-46 |
| MS.gene060940 | MS.gene31116 | 0.850152 | 2.04E-60 | -1.69E-46 |
| MS.gene060942 | MS.gene31116 | 0.834638 | 2.67E-56 | -1.69E-46 |
| MS.gene060943 | MS.gene31116 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene31116 | 0.834708 | 2.56E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene31116 | 0.833922 | 4.04E-56 | -1.69E-46 |
| MS.gene061040 | MS.gene31116 | -0.835743 | 1.41E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene31116 | 0.855574 | 5.76E-62 | -1.69E-46 |
| MS.gene061114 | MS.gene31116 | -0.842673 | 2.24E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31116.t1 | MTR_2g097690 | 84.286 | 280 | 18 | 6 | 1 | 267 | 6 | 272 | 3.52e-161 | 448 |
| MS.gene31116.t1 | MTR_2g097690 | 79.444 | 180 | 16 | 5 | 1 | 167 | 6 | 177 | 2.19e-91 | 269 |
| MS.gene31116.t1 | MTR_7g085600 | 47.126 | 87 | 45 | 1 | 63 | 148 | 52 | 138 | 1.74e-15 | 75.1 |
| MS.gene31116.t1 | MTR_7g069480 | 54.098 | 61 | 28 | 0 | 66 | 126 | 28 | 88 | 1.84e-13 | 70.1 |
| MS.gene31116.t1 | MTR_1g110310 | 55.556 | 63 | 27 | 1 | 66 | 127 | 17 | 79 | 3.56e-13 | 69.3 |
| MS.gene31116.t1 | MTR_3g087030 | 50.000 | 72 | 34 | 1 | 55 | 126 | 74 | 143 | 7.07e-13 | 68.2 |
| MS.gene31116.t1 | MTR_2g436560 | 36.792 | 106 | 63 | 2 | 25 | 126 | 60 | 165 | 1.41e-12 | 67.0 |
| MS.gene31116.t1 | MTR_5g035770 | 44.944 | 89 | 43 | 3 | 66 | 153 | 26 | 109 | 2.47e-12 | 66.6 |
| MS.gene31116.t1 | MTR_8g081620 | 33.333 | 135 | 78 | 6 | 3 | 133 | 6 | 132 | 3.34e-12 | 64.3 |
| MS.gene31116.t1 | MTR_3g073560 | 35.200 | 125 | 55 | 4 | 27 | 141 | 384 | 492 | 5.58e-12 | 65.9 |
| MS.gene31116.t1 | MTR_2g436580 | 36.957 | 92 | 57 | 1 | 36 | 126 | 80 | 171 | 7.51e-12 | 63.9 |
| MS.gene31116.t1 | MTR_2g104030 | 51.667 | 60 | 29 | 0 | 67 | 126 | 72 | 131 | 9.86e-12 | 65.1 |
| MS.gene31116.t1 | MTR_4g094275 | 40.506 | 79 | 42 | 2 | 55 | 128 | 41 | 119 | 2.42e-11 | 61.6 |
| MS.gene31116.t1 | MTR_4g032805 | 50.000 | 64 | 30 | 1 | 65 | 126 | 128 | 191 | 3.20e-11 | 62.4 |
| MS.gene31116.t1 | MTR_3g061170 | 44.186 | 86 | 37 | 2 | 52 | 126 | 38 | 123 | 3.63e-11 | 60.5 |
| MS.gene31116.t1 | MTR_5g065160 | 45.946 | 74 | 33 | 2 | 67 | 133 | 78 | 151 | 4.67e-11 | 62.8 |
| MS.gene31116.t1 | MTR_5g065160 | 45.946 | 74 | 33 | 2 | 67 | 133 | 85 | 158 | 4.69e-11 | 62.8 |
| MS.gene31116.t1 | MTR_5g065160 | 45.946 | 74 | 33 | 2 | 67 | 133 | 84 | 157 | 4.82e-11 | 62.8 |
| MS.gene31116.t1 | MTR_5g065160 | 45.946 | 74 | 33 | 2 | 67 | 133 | 85 | 158 | 5.21e-11 | 62.8 |
| MS.gene31116.t1 | MTR_1g105540 | 41.333 | 75 | 39 | 1 | 67 | 136 | 37 | 111 | 7.18e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31116.t1 | AT5G59610 | 68.326 | 221 | 62 | 5 | 51 | 267 | 62 | 278 | 2.03e-96 | 284 |
| MS.gene31116.t1 | AT5G59610 | 68.326 | 221 | 62 | 5 | 51 | 267 | 62 | 278 | 2.03e-96 | 284 |
| MS.gene31116.t1 | AT5G59610 | 64.706 | 221 | 59 | 6 | 51 | 267 | 62 | 267 | 9.51e-86 | 257 |
| MS.gene31116.t1 | AT5G59610 | 64.706 | 221 | 59 | 6 | 51 | 267 | 62 | 267 | 9.51e-86 | 257 |
| MS.gene31116.t1 | AT5G59610 | 50.562 | 178 | 82 | 4 | 51 | 226 | 62 | 235 | 3.78e-46 | 155 |
| MS.gene31116.t1 | AT5G18140 | 34.146 | 123 | 67 | 3 | 38 | 147 | 42 | 163 | 7.89e-14 | 70.9 |
| MS.gene31116.t1 | AT4G13830 | 33.750 | 160 | 77 | 7 | 5 | 148 | 10 | 156 | 1.30e-13 | 68.2 |
| MS.gene31116.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 50 | 126 | 59 | 136 | 4.85e-13 | 68.9 |
| MS.gene31116.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 50 | 126 | 59 | 136 | 5.51e-13 | 68.9 |
| MS.gene31116.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 50 | 126 | 59 | 136 | 5.51e-13 | 68.9 |
| MS.gene31116.t1 | AT1G80030 | 51.899 | 79 | 35 | 2 | 50 | 126 | 59 | 136 | 5.51e-13 | 68.9 |
| MS.gene31116.t1 | AT3G17830 | 35.652 | 115 | 70 | 2 | 13 | 126 | 13 | 124 | 6.34e-13 | 68.6 |
| MS.gene31116.t1 | AT4G13830 | 32.484 | 157 | 77 | 7 | 5 | 145 | 10 | 153 | 9.33e-13 | 65.1 |
| MS.gene31116.t1 | AT5G05750 | 33.913 | 115 | 60 | 2 | 55 | 153 | 103 | 217 | 1.10e-12 | 67.0 |
| MS.gene31116.t1 | AT3G08970 | 52.459 | 61 | 29 | 0 | 66 | 126 | 28 | 88 | 1.18e-12 | 67.8 |
| MS.gene31116.t1 | AT3G08970 | 52.459 | 61 | 29 | 0 | 66 | 126 | 28 | 88 | 1.18e-12 | 67.8 |
| MS.gene31116.t1 | AT3G57340 | 35.922 | 103 | 65 | 1 | 25 | 126 | 72 | 174 | 1.29e-12 | 67.4 |
| MS.gene31116.t1 | AT3G57340 | 35.922 | 103 | 65 | 1 | 25 | 126 | 72 | 174 | 1.29e-12 | 67.4 |
| MS.gene31116.t1 | AT4G13830 | 34.028 | 144 | 69 | 6 | 5 | 135 | 10 | 140 | 1.87e-12 | 64.7 |
| MS.gene31116.t1 | AT5G49060 | 46.154 | 65 | 35 | 0 | 62 | 126 | 96 | 160 | 3.21e-12 | 66.2 |
| MS.gene31116.t1 | AT5G49060 | 46.154 | 65 | 35 | 0 | 62 | 126 | 96 | 160 | 3.21e-12 | 66.2 |
| MS.gene31116.t1 | AT2G22360 | 53.333 | 60 | 28 | 0 | 67 | 126 | 88 | 147 | 4.25e-12 | 66.2 |
| MS.gene31116.t1 | AT4G39960 | 53.333 | 60 | 28 | 0 | 67 | 126 | 87 | 146 | 4.66e-12 | 65.9 |
| MS.gene31116.t1 | AT4G39960 | 53.333 | 60 | 28 | 0 | 67 | 126 | 87 | 146 | 4.66e-12 | 65.9 |
| MS.gene31116.t1 | AT1G59980 | 46.269 | 67 | 35 | 1 | 62 | 127 | 20 | 86 | 1.76e-11 | 63.9 |
| MS.gene31116.t1 | AT1G59980 | 46.269 | 67 | 35 | 1 | 62 | 127 | 20 | 86 | 1.81e-11 | 64.3 |
| MS.gene31116.t1 | AT1G68370 | 50.000 | 70 | 32 | 2 | 66 | 134 | 18 | 85 | 1.88e-11 | 63.9 |
| MS.gene31116.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 67 | 126 | 50 | 110 | 2.49e-11 | 63.9 |
| MS.gene31116.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 67 | 126 | 50 | 110 | 2.50e-11 | 63.5 |
| MS.gene31116.t1 | AT1G28210 | 50.820 | 61 | 29 | 1 | 67 | 126 | 50 | 110 | 2.57e-11 | 63.5 |
| MS.gene31116.t1 | AT1G24120 | 41.573 | 89 | 46 | 3 | 66 | 153 | 21 | 104 | 2.90e-11 | 63.5 |
| MS.gene31116.t1 | AT3G13310 | 45.714 | 70 | 36 | 1 | 61 | 130 | 60 | 127 | 9.16e-11 | 59.3 |
Find 48 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTACAGGAGACTTCTTTA+AGG | 0.240029 | 2.4:-6181869 | MS.gene31116:intron |
| GTGGCTATAGAAATAGAATA+AGG | 0.258658 | 2.4:-6185460 | MS.gene31116:CDS |
| TTGAAGAACTCGTTTGGTTT+TGG | 0.285091 | 2.4:+6185540 | None:intergenic |
| ATCTGTGAATGAAATCAAAA+AGG | 0.320337 | 2.4:-6185375 | MS.gene31116:CDS |
| GAGTCTCCATATGAAGTTCT+TGG | 0.367430 | 2.4:-6185413 | MS.gene31116:CDS |
| AGAGATGTTCAAATAACAAT+AGG | 0.374423 | 2.4:-6182088 | MS.gene31116:intron |
| CAACTTGTTGATTCCAACTC+TGG | 0.377760 | 2.4:+6183721 | None:intergenic |
| TAGAAATTGAAGAACTCGTT+TGG | 0.383805 | 2.4:+6185534 | None:intergenic |
| GACAAACCAAGAACTTCATA+TGG | 0.429946 | 2.4:+6185407 | None:intergenic |
| TCACCTTGAGTGCTGTTGCT+TGG | 0.430562 | 2.4:+6181342 | None:intergenic |
| ATTACCTCTTTATTAACATC+AGG | 0.432548 | 2.4:+6185323 | None:intergenic |
| TTCAAGAAGAGTTCAAGAAC+TGG | 0.433984 | 2.4:-6181843 | MS.gene31116:CDS |
| CTATATCTGATTCTGAAACT+AGG | 0.435657 | 2.4:+6185509 | None:intergenic |
| AAGGAAAGCCGAAGAGCCTA+TGG | 0.442336 | 2.4:-6181801 | MS.gene31116:CDS |
| TGGCTATAGAAATAGAATAA+GGG | 0.455128 | 2.4:-6185459 | MS.gene31116:CDS |
| ATGAAGATGGTTGAAGAAAT+CGG | 0.458404 | 2.4:+6185573 | None:intergenic |
| GGAAATAGGCGAAGAATTTG+TGG | 0.458728 | 2.4:-6181451 | MS.gene31116:CDS |
| AACTCCTCCCATAGGCTCTT+CGG | 0.475580 | 2.4:+6181793 | None:intergenic |
| TGATTCAAATGAAAGTCCTC+AGG | 0.489157 | 2.4:-6181400 | MS.gene31116:CDS |
| CACTCAAGGTGAAGCTAGCA+AGG | 0.491535 | 2.4:-6181331 | MS.gene31116:CDS |
| GAGCCTATGGGAGGAGTTGT+CGG | 0.510611 | 2.4:-6181788 | MS.gene31116:intron |
| TCATCCTGATGTTAATAAAG+AGG | 0.514132 | 2.4:-6185327 | MS.gene31116:intron |
| GAGTGGCTTCTATTTCATCA+AGG | 0.517887 | 2.4:+6181286 | None:intergenic |
| TTCAGAATCATACTTTCTGC+GGG | 0.518411 | 2.4:+6183773 | None:intergenic |
| ATTTCATTCACAGATGCAGA+TGG | 0.530663 | 2.4:+6185383 | None:intergenic |
| CTTCTCAAAGAAGCCAGAGT+TGG | 0.533826 | 2.4:-6183734 | MS.gene31116:CDS |
| TTTCAGAATCATACTTTCTG+CGG | 0.543741 | 2.4:+6183772 | None:intergenic |
| ACACCAAGCAACAGCACTCA+AGG | 0.557671 | 2.4:-6181345 | MS.gene31116:CDS |
| CAGCATGAGAACAAAGGAAG+AGG | 0.565694 | 2.4:-6185482 | MS.gene31116:CDS |
| AAATAGAAGCCACTCTAGCT+CGG | 0.585461 | 2.4:-6181278 | MS.gene31116:CDS |
| GAAGCTAGTGCGGCTGCACA+AGG | 0.586139 | 2.4:-6181820 | MS.gene31116:CDS |
| TAAGGGTAGTTGTAAGAGCA+AGG | 0.586280 | 2.4:-6185442 | MS.gene31116:CDS |
| AGAAAGCAGCATGAGAACAA+AGG | 0.590712 | 2.4:-6185488 | MS.gene31116:CDS |
| CAAGAACTGGGAAGCTAGTG+CGG | 0.594019 | 2.4:-6181830 | MS.gene31116:CDS |
| TCAAGAAGAGTTCAAGAACT+GGG | 0.606488 | 2.4:-6181842 | MS.gene31116:CDS |
| CAATATTGAGTTCTTTCTCG+AGG | 0.608230 | 2.4:+6181424 | None:intergenic |
| TCACCGACAACTCCTCCCAT+AGG | 0.620299 | 2.4:+6181785 | None:intergenic |
| CATGAGAACAAAGGAAGAGG+TGG | 0.621705 | 2.4:-6185479 | MS.gene31116:CDS |
| AAGTATGATTCTGAAAATCG+TGG | 0.629512 | 2.4:-6183765 | MS.gene31116:CDS |
| CAAGGGAAACACAAGCGTTG+AGG | 0.630371 | 2.4:-6181313 | MS.gene31116:CDS |
| AGGAAAGCCGAAGAGCCTAT+GGG | 0.632474 | 2.4:-6181800 | MS.gene31116:CDS |
| GATTCAAATGAAAGTCCTCA+GGG | 0.638771 | 2.4:-6181399 | MS.gene31116:CDS |
| ATTCTCACAGGACAATGCAC+AGG | 0.650566 | 2.4:-6183847 | MS.gene31116:intron |
| TTAGATGAATTTCCTCCCTG+AGG | 0.666308 | 2.4:+6181384 | None:intergenic |
| ACTCAAGGTGAAGCTAGCAA+GGG | 0.673091 | 2.4:-6181330 | MS.gene31116:CDS |
| AAAGCCGAAGAGCCTATGGG+AGG | 0.695988 | 2.4:-6181797 | MS.gene31116:CDS |
| TCAAATGAAAGTCCTCAGGG+AGG | 0.744401 | 2.4:-6181396 | MS.gene31116:CDS |
| GTAGTTGTAAGAGCAAGGCG+TGG | 0.746025 | 2.4:-6185437 | MS.gene31116:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATTTTGATTTTGTTT+TGG | - | chr2.4:6184481-6184500 | MS.gene31116:intron | 10.0% |
| !! | AAAAAAAAATAGATCAGTAA+TGG | + | chr2.4:6184147-6184166 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGATCAGTAAT+GGG | + | chr2.4:6184146-6184165 | None:intergenic | 15.0% |
| !! | TGCTAATAATATCATAATAA+TGG | + | chr2.4:6181758-6181777 | None:intergenic | 15.0% |
| !! | TTAGAAAAATAAAACAACAT+AGG | + | chr2.4:6182595-6182614 | None:intergenic | 15.0% |
| !!! | ATATCTTAATGGATTTATTA+TGG | + | chr2.4:6183459-6183478 | None:intergenic | 15.0% |
| !!! | ATGTGATTTTAAAAACAAAT+AGG | + | chr2.4:6185231-6185250 | None:intergenic | 15.0% |
| !!! | ATGTTGTTTTATTTTTCTAA+AGG | - | chr2.4:6182595-6182614 | MS.gene31116:intron | 15.0% |
| !!! | TTTTTGAAATTTTAACTTTC+AGG | - | chr2.4:6185384-6185403 | MS.gene31116:CDS | 15.0% |
| !! | AAAATAGATTTGTAACTTTG+AGG | + | chr2.4:6184320-6184339 | None:intergenic | 20.0% |
| !! | AAGTTACTAATTTGATCAAA+TGG | + | chr2.4:6184685-6184704 | None:intergenic | 20.0% |
| !! | AATATAGATAAAGGATAATC+TGG | - | chr2.4:6184076-6184095 | MS.gene31116:intron | 20.0% |
| !! | ATAATGATGTAGTCATATAA+CGG | - | chr2.4:6182869-6182888 | MS.gene31116:intron | 20.0% |
| !! | ATATTATTAGTAGGATGTAA+TGG | - | chr2.4:6183356-6183375 | MS.gene31116:intron | 20.0% |
| !! | CTTAGTAGTTTATTATTATG+TGG | - | chr2.4:6181586-6181605 | MS.gene31116:intron | 20.0% |
| !! | GAGTGATAAAAATATCTTAA+TGG | + | chr2.4:6183470-6183489 | None:intergenic | 20.0% |
| !! | TAAAATTTGTAATGAAATGC+AGG | + | chr2.4:6184847-6184866 | None:intergenic | 20.0% |
| !! | TAATAGTAAACTTCACTTTA+AGG | + | chr2.4:6183495-6183514 | None:intergenic | 20.0% |
| !! | TTTGAAGATAAAAGATTTCA+TGG | - | chr2.4:6181824-6181843 | MS.gene31116:CDS | 20.0% |
| !!! | AAAACTTTTTAAATTGACAG+TGG | - | chr2.4:6185281-6185300 | MS.gene31116:intron | 20.0% |
| !!! | AATTTTAACTTTCAGGAAAT+AGG | - | chr2.4:6185391-6185410 | MS.gene31116:CDS | 20.0% |
| !!! | CATTTCATTACAAATTTTAC+TGG | - | chr2.4:6184848-6184867 | MS.gene31116:intron | 20.0% |
| !!! | GTTTTATATTTCATTTCATG+TGG | - | chr2.4:6184941-6184960 | MS.gene31116:intron | 20.0% |
| !!! | TAACATTTTTATTTGTGTGT+TGG | - | chr2.4:6185104-6185123 | MS.gene31116:intron | 20.0% |
| !!! | TACTCTTTTCTATGTTAATT+TGG | - | chr2.4:6183386-6183405 | MS.gene31116:intron | 20.0% |
| !!! | TTCTAAGGTAATATAGATAA+AGG | - | chr2.4:6184067-6184086 | MS.gene31116:intron | 20.0% |
| !!! | TTGTCTTTTTGATAAAAAGA+GGG | - | chr2.4:6183942-6183961 | MS.gene31116:intron | 20.0% |
| !!! | TTTGTCTTTTTGATAAAAAG+AGG | - | chr2.4:6183941-6183960 | MS.gene31116:intron | 20.0% |
| !!! | TTTTAGAAAAACAAGGATAA+AGG | - | chr2.4:6182801-6182820 | MS.gene31116:intron | 20.0% |
| ! | AAATCCACAAAGATATTCTA+AGG | - | chr2.4:6184052-6184071 | MS.gene31116:intron | 25.0% |
| ! | AACCAGCATATATTATTAGT+AGG | - | chr2.4:6183347-6183366 | MS.gene31116:intron | 25.0% |
| ! | AAGGATTCAATTATATACAC+TGG | - | chr2.4:6185136-6185155 | MS.gene31116:intron | 25.0% |
| ! | ACACAAATAAAAATGTTAGC+GGG | + | chr2.4:6185102-6185121 | None:intergenic | 25.0% |
| ! | ACTAATAGTACTAGTACTTA+AGG | + | chr2.4:6183999-6184018 | None:intergenic | 25.0% |
| ! | AGAGATGTTCAAATAACAAT+AGG | - | chr2.4:6184768-6184787 | MS.gene31116:intron | 25.0% |
| ! | ATCAAAAGAGATGAAATACA+AGG | - | chr2.4:6184199-6184218 | MS.gene31116:intron | 25.0% |
| ! | ATCCTACTAATAATATATGC+TGG | + | chr2.4:6183352-6183371 | None:intergenic | 25.0% |
| ! | ATCTGTGAATGAAATCAAAA+AGG | - | chr2.4:6181481-6181500 | MS.gene31116:intron | 25.0% |
| ! | ATGAAATCAAAAAGGCTTAT+AGG | - | chr2.4:6181489-6181508 | MS.gene31116:intron | 25.0% |
| ! | ATTACCTCTTTATTAACATC+AGG | + | chr2.4:6181536-6181555 | None:intergenic | 25.0% |
| ! | ATTACCTTAGAATATCTTTG+TGG | + | chr2.4:6184059-6184078 | None:intergenic | 25.0% |
| ! | ATTATGGCTATATCATTAGT+TGG | + | chr2.4:6183443-6183462 | None:intergenic | 25.0% |
| ! | CAATAGTTTCCTGTAAAAAT+GGG | + | chr2.4:6183702-6183721 | None:intergenic | 25.0% |
| ! | CACACAAATAAAAATGTTAG+CGG | + | chr2.4:6185103-6185122 | None:intergenic | 25.0% |
| ! | CTACAGAAAATGTTAAATAG+TGG | - | chr2.4:6181906-6181925 | MS.gene31116:intron | 25.0% |
| ! | TAAAGGAGAACATAAATTGA+GGG | + | chr2.4:6184573-6184592 | None:intergenic | 25.0% |
| ! | TGACATTCATACTATAATCA+TGG | + | chr2.4:6182476-6182495 | None:intergenic | 25.0% |
| ! | TGGCTATAGAAATAGAATAA+GGG | - | chr2.4:6181397-6181416 | MS.gene31116:CDS | 25.0% |
| ! | TGTGAAATAACAACTATAGT+GGG | - | chr2.4:6181978-6181997 | MS.gene31116:intron | 25.0% |
| ! | TTAATTTAACGAAGATGGTA+CGG | - | chr2.4:6184518-6184537 | MS.gene31116:intron | 25.0% |
| ! | TTGTGAAATAACAACTATAG+TGG | - | chr2.4:6181977-6181996 | MS.gene31116:intron | 25.0% |
| !! | AATTGTCAGATACAATCTTT+TGG | + | chr2.4:6182921-6182940 | None:intergenic | 25.0% |
| !! | ATACTTTTCTTGAGTATTTG+GGG | + | chr2.4:6183799-6183818 | None:intergenic | 25.0% |
| !! | ATATCTTTGTGGATTTGTTT+AGG | + | chr2.4:6184048-6184067 | None:intergenic | 25.0% |
| !! | CAATAAGTTGGAAAAAGTTT+CGG | - | chr2.4:6182445-6182464 | MS.gene31116:intron | 25.0% |
| !! | GAAGAAGAATTTTATGGATT+AGG | - | chr2.4:6183157-6183176 | MS.gene31116:intron | 25.0% |
| !! | GATACTTTTCTTGAGTATTT+GGG | + | chr2.4:6183800-6183819 | None:intergenic | 25.0% |
| !! | TATTTTATGCTCCAATAAGT+TGG | - | chr2.4:6182433-6182452 | MS.gene31116:intron | 25.0% |
| !! | TGATACTTTTCTTGAGTATT+TGG | + | chr2.4:6183801-6183820 | None:intergenic | 25.0% |
| !! | TGGATTTAATTTAACGAAGA+TGG | - | chr2.4:6184513-6184532 | MS.gene31116:intron | 25.0% |
| !! | TTATGTGGAAGTTTTTGTAT+AGG | - | chr2.4:6181601-6181620 | MS.gene31116:intron | 25.0% |
| !!! | ACTTTGAGGTTAAGTTTATT+CGG | + | chr2.4:6184306-6184325 | None:intergenic | 25.0% |
| !!! | ATTTTAAAGTGTATTCTCAC+AGG | - | chr2.4:6182997-6183016 | MS.gene31116:intron | 25.0% |
| !!! | CAAGTTGAAGAAGAATTTTA+TGG | - | chr2.4:6183151-6183170 | MS.gene31116:intron | 25.0% |
| !!! | GTATGGATTTTAGAAAAACA+AGG | - | chr2.4:6182794-6182813 | MS.gene31116:intron | 25.0% |
| !!! | TATTTTTCTAAAGGAAATCC+CGG | - | chr2.4:6182604-6182623 | MS.gene31116:intron | 25.0% |
| !!! | TCTGATGATTTTGTTATTAC+AGG | - | chr2.4:6184973-6184992 | MS.gene31116:intron | 25.0% |
| !!! | TTTTGTTTTGGTTTATTGTG+TGG | - | chr2.4:6184493-6184512 | MS.gene31116:intron | 25.0% |
| AAAAGAGATGAAATACAAGG+AGG | - | chr2.4:6184202-6184221 | MS.gene31116:intron | 30.0% | |
| AACAATGTGCTTTACTAACA+AGG | + | chr2.4:6182405-6182424 | None:intergenic | 30.0% | |
| AACATAGGAAAATCCAAGAT+TGG | + | chr2.4:6182580-6182599 | None:intergenic | 30.0% | |
| AATCTCTAACAACAACCAAA+TGG | - | chr2.4:6184372-6184391 | MS.gene31116:intron | 30.0% | |
| AATTACAGCCTTAGGATAAT+AGG | - | chr2.4:6183281-6183300 | MS.gene31116:intron | 30.0% | |
| AATTGTTAAGTGTCCAACAT+CGG | - | chr2.4:6182081-6182100 | MS.gene31116:intron | 30.0% | |
| AGGATTAGGGAAAAAGAAAA+AGG | - | chr2.4:6183301-6183320 | MS.gene31116:intron | 30.0% | |
| AGTTTATTACGCATGACTTA+AGG | + | chr2.4:6183910-6183929 | None:intergenic | 30.0% | |
| ATCATATTTCAGTCATGCTT+CGG | + | chr2.4:6183968-6183987 | None:intergenic | 30.0% | |
| ATGAAGATGGTTGAAGAAAT+CGG | + | chr2.4:6181286-6181305 | None:intergenic | 30.0% | |
| CACTATTGTTTGTGATTTAG+GGG | - | chr2.4:6181708-6181727 | MS.gene31116:intron | 30.0% | |
| CATAGAACACAACAAAGAAT+TGG | + | chr2.4:6181686-6181705 | None:intergenic | 30.0% | |
| CTAAAGGAGAACATAAATTG+AGG | + | chr2.4:6184574-6184593 | None:intergenic | 30.0% | |
| CTATCATCTTAAGTTTCTGA+TGG | + | chr2.4:6183644-6183663 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr2.4:6182116-6182135 | MS.gene31116:intron | 30.0% | |
| GCAATAGTTTCCTGTAAAAA+TGG | + | chr2.4:6183703-6183722 | None:intergenic | 30.0% | |
| GCACTATTGTTTGTGATTTA+GGG | - | chr2.4:6181707-6181726 | MS.gene31116:intron | 30.0% | |
| GTGGCTATAGAAATAGAATA+AGG | - | chr2.4:6181396-6181415 | MS.gene31116:CDS | 30.0% | |
| TACTAATTTGATCAAATGGC+AGG | + | chr2.4:6184681-6184700 | None:intergenic | 30.0% | |
| TAGAAATTGAAGAACTCGTT+TGG | + | chr2.4:6181325-6181344 | None:intergenic | 30.0% | |
| TAGTATTAGAAGAGAGTTCA+AGG | + | chr2.4:6184598-6184617 | None:intergenic | 30.0% | |
| TATTACAGGAGACTTCTTTA+AGG | - | chr2.4:6184987-6185006 | MS.gene31116:intron | 30.0% | |
| TATTCTTAGAAATCGTGGTT+GGG | + | chr2.4:6182186-6182205 | None:intergenic | 30.0% | |
| TCAATATTCACAGCACAATT+TGG | + | chr2.4:6181881-6181900 | None:intergenic | 30.0% | |
| TCATCCTGATGTTAATAAAG+AGG | - | chr2.4:6181529-6181548 | MS.gene31116:intron | 30.0% | |
| TCCATTATTCTTAGAAATCG+TGG | + | chr2.4:6182191-6182210 | None:intergenic | 30.0% | |
| TCCCATATTAATCTATCAAC+CGG | - | chr2.4:6184887-6184906 | MS.gene31116:intron | 30.0% | |
| TCTGACAATGTGTTTATAAG+TGG | - | chr2.4:6182115-6182134 | MS.gene31116:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr2.4:6182117-6182136 | MS.gene31116:intron | 30.0% | |
| TGCACTATTGTTTGTGATTT+AGG | - | chr2.4:6181706-6181725 | MS.gene31116:intron | 30.0% | |
| TGTTAATCAATCGTGATCAT+CGG | - | chr2.4:6185180-6185199 | MS.gene31116:intron | 30.0% | |
| TGTTTATCATCTTCCAATCT+TGG | - | chr2.4:6182564-6182583 | MS.gene31116:intron | 30.0% | |
| TTATTCTTAGAAATCGTGGT+TGG | + | chr2.4:6182187-6182206 | None:intergenic | 30.0% | |
| TTCATGGTTGCAAACTTTAT+TGG | - | chr2.4:6181840-6181859 | MS.gene31116:CDS | 30.0% | |
| TTTCAGAATCATACTTTCTG+CGG | + | chr2.4:6183087-6183106 | None:intergenic | 30.0% | |
| TTTCCTAGATCTTGTTAAGA+TGG | + | chr2.4:6184115-6184134 | None:intergenic | 30.0% | |
| ! | AAGTATGATTCTGAAAATCG+TGG | - | chr2.4:6183091-6183110 | MS.gene31116:intron | 30.0% |
| ! | ACCACGATTTCTAAGAATAA+TGG | - | chr2.4:6182187-6182206 | MS.gene31116:intron | 30.0% |
| ! | TGCTATGTTCAACACTTTTA+TGG | - | chr2.4:6181556-6181575 | MS.gene31116:intron | 30.0% |
| ! | TGGAAGTTTTTGTATAGGTT+TGG | - | chr2.4:6181606-6181625 | MS.gene31116:intron | 30.0% |
| !! | AATTCACAAACCGATTTTGT+GGG | - | chr2.4:6182149-6182168 | MS.gene31116:intron | 30.0% |
| !! | AATTTTTGTTTGTCCATCAG+CGG | + | chr2.4:6182721-6182740 | None:intergenic | 30.0% |
| !! | ATTGAAGGTTTTGTGATTTG+AGG | + | chr2.4:6183599-6183618 | None:intergenic | 30.0% |
| !! | ATTTTTCTAAAGGAAATCCC+GGG | - | chr2.4:6182605-6182624 | MS.gene31116:intron | 30.0% |
| !! | CGAAACTTTTTCCAACTTAT+TGG | + | chr2.4:6182447-6182466 | None:intergenic | 30.0% |
| !! | CTATATCTGATTCTGAAACT+AGG | + | chr2.4:6181350-6181369 | None:intergenic | 30.0% |
| !! | TACTTATTTGCAGTCTTGTT+TGG | - | chr2.4:6183190-6183209 | MS.gene31116:intron | 30.0% |
| !! | TCAAGAAAAGTATCAAACAC+TGG | - | chr2.4:6183806-6183825 | MS.gene31116:CDS | 30.0% |
| !! | TTGAAGGTTTTGTGATTTGA+GGG | + | chr2.4:6183598-6183617 | None:intergenic | 30.0% |
| !!! | TAGCAGTTTTGAATGATATG+TGG | - | chr2.4:6181773-6181792 | MS.gene31116:intron | 30.0% |
| AAAAGAAAAAGGCAGAAAGG+TGG | - | chr2.4:6183312-6183331 | MS.gene31116:intron | 35.0% | |
| AAATAACAACGTGAGAAGAC+TGG | - | chr2.4:6182503-6182522 | MS.gene31116:intron | 35.0% | |
| AACAAGATCTAGGAAACGAT+TGG | - | chr2.4:6184119-6184138 | MS.gene31116:intron | 35.0% | |
| AACTGCACCAAATACATGAA+TGG | + | chr2.4:6184442-6184461 | None:intergenic | 35.0% | |
| AATAACAACGTGAGAAGACT+GGG | - | chr2.4:6182504-6182523 | MS.gene31116:intron | 35.0% | |
| ACAAGGAGACTTAAAAAGTC+AGG | + | chr2.4:6182388-6182407 | None:intergenic | 35.0% | |
| ACATAAATTGAGGGTGATTG+AGG | + | chr2.4:6184564-6184583 | None:intergenic | 35.0% | |
| AGCCTTAGGATAATAGGATT+AGG | - | chr2.4:6183287-6183306 | MS.gene31116:intron | 35.0% | |
| AGCTCATAATCTAGCTATAG+CGG | + | chr2.4:6184266-6184285 | None:intergenic | 35.0% | |
| ATAGGTAGCTATATACTCTC+TGG | - | chr2.4:6184786-6184805 | MS.gene31116:intron | 35.0% | |
| ATTGTGCTGTGAATATTGAC+TGG | - | chr2.4:6181882-6181901 | MS.gene31116:intron | 35.0% | |
| ATTTCATTCACAGATGCAGA+TGG | + | chr2.4:6181476-6181495 | None:intergenic | 35.0% | |
| CAAATAAAAATGTTAGCGGG+AGG | + | chr2.4:6185099-6185118 | None:intergenic | 35.0% | |
| CAATATTGAGTTCTTTCTCG+AGG | + | chr2.4:6185435-6185454 | None:intergenic | 35.0% | |
| CCCATATTAATCTATCAACC+GGG | - | chr2.4:6184888-6184907 | MS.gene31116:intron | 35.0% | |
| CGAGTTATGTTCAGAATTGA+AGG | + | chr2.4:6183614-6183633 | None:intergenic | 35.0% | |
| CTAAGGCTGTAATTCTGTAA+CGG | + | chr2.4:6183275-6183294 | None:intergenic | 35.0% | |
| CTAATGTGCTAAGTTTCTCT+TGG | + | chr2.4:6183725-6183744 | None:intergenic | 35.0% | |
| CTAGAACCATCTTAAATGTG+TGG | - | chr2.4:6182362-6182381 | MS.gene31116:intron | 35.0% | |
| CTCATCTAGCCAAATAACTT+TGG | - | chr2.4:6183555-6183574 | MS.gene31116:intron | 35.0% | |
| CTTCCATCTTAACAAGATCT+AGG | - | chr2.4:6184109-6184128 | MS.gene31116:intron | 35.0% | |
| GACAAACCAAGAACTTCATA+TGG | + | chr2.4:6181452-6181471 | None:intergenic | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr2.4:6182118-6182137 | MS.gene31116:intron | 35.0% | |
| GAGGAACAAAATCAAAGACT+TGG | - | chr2.4:6184221-6184240 | MS.gene31116:intron | 35.0% | |
| GATTCAAATGAAAGTCCTCA+GGG | - | chr2.4:6185457-6185476 | MS.gene31116:CDS | 35.0% | |
| GCCTTAGGATAATAGGATTA+GGG | - | chr2.4:6183288-6183307 | MS.gene31116:intron | 35.0% | |
| GGAAAAAGAAAAAGGCAGAA+AGG | - | chr2.4:6183309-6183328 | MS.gene31116:intron | 35.0% | |
| TCAAGAAGAGTTCAAGAACT+GGG | - | chr2.4:6185014-6185033 | MS.gene31116:intron | 35.0% | |
| TCATCTTAAGTTTCTGATGG+AGG | + | chr2.4:6183641-6183660 | None:intergenic | 35.0% | |
| TCCCTAATCCTATTATCCTA+AGG | + | chr2.4:6183292-6183311 | None:intergenic | 35.0% | |
| TGATTCAAATGAAAGTCCTC+AGG | - | chr2.4:6185456-6185475 | MS.gene31116:CDS | 35.0% | |
| TGCTAGTTGCCAAAGTTATT+TGG | + | chr2.4:6183567-6183586 | None:intergenic | 35.0% | |
| TTCAAGAAGAGTTCAAGAAC+TGG | - | chr2.4:6185013-6185032 | MS.gene31116:intron | 35.0% | |
| TTCAGAATCATACTTTCTGC+GGG | + | chr2.4:6183086-6183105 | None:intergenic | 35.0% | |
| TTGAGGTTAAGTTTATTCGG+AGG | + | chr2.4:6184303-6184322 | None:intergenic | 35.0% | |
| ! | ATGCACAGGAGAAATTTTTG+AGG | - | chr2.4:6183023-6183042 | MS.gene31116:intron | 35.0% |
| ! | GCTATATCATTAGTTGGCTT+GGG | + | chr2.4:6183437-6183456 | None:intergenic | 35.0% |
| ! | GTCATATAACGGCTCTATTT+TGG | - | chr2.4:6182880-6182899 | MS.gene31116:intron | 35.0% |
| ! | TCAGATACAATCTTTTGGCA+CGG | + | chr2.4:6182916-6182935 | None:intergenic | 35.0% |
| ! | TTTTCTTGAGTATTTGGGGA+TGG | + | chr2.4:6183795-6183814 | None:intergenic | 35.0% |
| !! | AAACTGCAACCCATTTTTAC+AGG | - | chr2.4:6183690-6183709 | MS.gene31116:intron | 35.0% |
| !! | ATTCACAAACCGATTTTGTG+GGG | - | chr2.4:6182150-6182169 | MS.gene31116:intron | 35.0% |
| !! | CAATTCACAAACCGATTTTG+TGG | - | chr2.4:6182148-6182167 | MS.gene31116:intron | 35.0% |
| !! | CCCGGTTGATAGATTAATAT+GGG | + | chr2.4:6184891-6184910 | None:intergenic | 35.0% |
| !! | TCCCGGTTGATAGATTAATA+TGG | + | chr2.4:6184892-6184911 | None:intergenic | 35.0% |
| !! | TGAAGGTTTTGTGATTTGAG+GGG | + | chr2.4:6183597-6183616 | None:intergenic | 35.0% |
| !! | TTGAAGAACTCGTTTGGTTT+TGG | + | chr2.4:6181319-6181338 | None:intergenic | 35.0% |
| !!! | AACTCGTTTGGTTTTGGTTT+TGG | + | chr2.4:6181313-6181332 | None:intergenic | 35.0% |
| AAAATGATGAGTCCACGTGT+AGG | + | chr2.4:6185368-6185387 | None:intergenic | 40.0% | |
| AAAGCCTTCAGTATGCAACA+AGG | - | chr2.4:6185341-6185360 | MS.gene31116:CDS | 40.0% | |
| AAATAGAAGCCACTCTAGCT+CGG | - | chr2.4:6185578-6185597 | MS.gene31116:CDS | 40.0% | |
| AATCTATCAACCGGGACAAA+GGG | - | chr2.4:6184896-6184915 | MS.gene31116:intron | 40.0% | |
| ACAATCAGTGTTGTCAACTG+CGG | + | chr2.4:6182050-6182069 | None:intergenic | 40.0% | |
| ACCTTGTGACAATGTGAAAG+TGG | + | chr2.4:6182269-6182288 | None:intergenic | 40.0% | |
| AGAAAGCAGCATGAGAACAA+AGG | - | chr2.4:6181368-6181387 | MS.gene31116:CDS | 40.0% | |
| AGGTAATTGTTCTTGTCGCT+AGG | + | chr2.4:6184028-6184047 | None:intergenic | 40.0% | |
| ATACCTCGCTGAAAACCATT+TGG | + | chr2.4:6184390-6184409 | None:intergenic | 40.0% | |
| ATCCTGAACCATTCAAACAC+AGG | - | chr2.4:6183748-6183767 | MS.gene31116:CDS | 40.0% | |
| ATTTGATCAAATGGCAGGAC+AGG | + | chr2.4:6184676-6184695 | None:intergenic | 40.0% | |
| CAAATTCCGGTACACGATAA+AGG | + | chr2.4:6182004-6182023 | None:intergenic | 40.0% | |
| CAGCAGACCATTCATGTATT+TGG | - | chr2.4:6184432-6184451 | MS.gene31116:intron | 40.0% | |
| CATTGTCACAAGGTTTGTCA+TGG | - | chr2.4:6182275-6182294 | MS.gene31116:intron | 40.0% | |
| CGTTACAGAATTACAGCCTT+AGG | - | chr2.4:6183273-6183292 | MS.gene31116:intron | 40.0% | |
| CTAACACAACCCCACAAAAT+CGG | + | chr2.4:6182162-6182181 | None:intergenic | 40.0% | |
| CTACAAGTGTACATACATGC+AGG | + | chr2.4:6182542-6182561 | None:intergenic | 40.0% | |
| CTTAAGTTTCTGATGGAGGT+TGG | + | chr2.4:6183637-6183656 | None:intergenic | 40.0% | |
| GAAGAGAGTTCAAGGACTAA+AGG | + | chr2.4:6184590-6184609 | None:intergenic | 40.0% | |
| GAGTCTCCATATGAAGTTCT+TGG | - | chr2.4:6181443-6181462 | MS.gene31116:CDS | 40.0% | |
| GAGTGGCTTCTATTTCATCA+AGG | + | chr2.4:6185573-6185592 | None:intergenic | 40.0% | |
| GCTCGGTTAAAAAAGGAGTT+AGG | - | chr2.4:6185595-6185614 | MS.gene31116:CDS | 40.0% | |
| GGAAATAGGCGAAGAATTTG+TGG | - | chr2.4:6185405-6185424 | MS.gene31116:CDS | 40.0% | |
| GGCTATATCATTAGTTGGCT+TGG | + | chr2.4:6183438-6183457 | None:intergenic | 40.0% | |
| GTGAGTGATCATCACAAGTT+TGG | + | chr2.4:6183844-6183863 | None:intergenic | 40.0% | |
| TAAGGGTAGTTGTAAGAGCA+AGG | - | chr2.4:6181414-6181433 | MS.gene31116:CDS | 40.0% | |
| TAATCTATCAACCGGGACAA+AGG | - | chr2.4:6184895-6184914 | MS.gene31116:intron | 40.0% | |
| TACGCATGACTTAAGGTTCA+GGG | + | chr2.4:6183903-6183922 | None:intergenic | 40.0% | |
| TCCACTTTCACATTGTCACA+AGG | - | chr2.4:6182265-6182284 | MS.gene31116:intron | 40.0% | |
| TGAAATGCAGGCTAAACTCA+TGG | + | chr2.4:6184835-6184854 | None:intergenic | 40.0% | |
| TGAACCATTCAAACACAGGA+AGG | - | chr2.4:6183752-6183771 | MS.gene31116:CDS | 40.0% | |
| TGGTGCAGTTAAAAACTGTC+AGG | - | chr2.4:6184452-6184471 | MS.gene31116:intron | 40.0% | |
| TGTGTGTTGGAGTTCAGTTA+AGG | - | chr2.4:6185117-6185136 | MS.gene31116:intron | 40.0% | |
| TTACGCATGACTTAAGGTTC+AGG | + | chr2.4:6183904-6183923 | None:intergenic | 40.0% | |
| TTAGATGAATTTCCTCCCTG+AGG | + | chr2.4:6185475-6185494 | None:intergenic | 40.0% | |
| TTCCTGTGTTTGAATGGTTC+AGG | + | chr2.4:6183753-6183772 | None:intergenic | 40.0% | |
| TTCTCTTCTGTCTGCTTGTT+TGG | + | chr2.4:6183669-6183688 | None:intergenic | 40.0% | |
| TTGAAAGCCAGTTATCACGA+TGG | + | chr2.4:6182768-6182787 | None:intergenic | 40.0% | |
| TTGATCACCATCGTGATAAC+TGG | - | chr2.4:6182758-6182777 | MS.gene31116:intron | 40.0% | |
| ! | CACTCTAGCTCGGTTAAAAA+AGG | - | chr2.4:6185588-6185607 | MS.gene31116:CDS | 40.0% |
| ! | CCTTACACTGCATTTTGCTA+GGG | - | chr2.4:6184346-6184365 | MS.gene31116:intron | 40.0% |
| ! | CTGGCTTTCAATCATGAGTA+TGG | - | chr2.4:6182777-6182796 | MS.gene31116:intron | 40.0% |
| ! | CTTACACTGCATTTTGCTAG+GGG | - | chr2.4:6184347-6184366 | MS.gene31116:intron | 40.0% |
| ! | TGCATACTGAAGGCTTTTCT+TGG | + | chr2.4:6185338-6185357 | None:intergenic | 40.0% |
| !! | CAACTTGTTGATTCCAACTC+TGG | + | chr2.4:6183138-6183157 | None:intergenic | 40.0% |
| !!! | CTTTTTTAACCGAGCTAGAG+TGG | + | chr2.4:6185590-6185609 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGAAGCATGAAGA+TGG | + | chr2.4:6181299-6181318 | None:intergenic | 40.0% |
| AAAGACTTGGCGACCAACAT+AGG | - | chr2.4:6184234-6184253 | MS.gene31116:intron | 45.0% | |
| ACTCAAGGTGAAGCTAGCAA+GGG | - | chr2.4:6185526-6185545 | MS.gene31116:CDS | 45.0% | |
| AGGAAGGAGAGACACATATC+TGG | - | chr2.4:6183768-6183787 | MS.gene31116:CDS | 45.0% | |
| AGGTCCTTGTTGCATACTGA+AGG | + | chr2.4:6185348-6185367 | None:intergenic | 45.0% | |
| ATAGCGGCCATTTCCTATGT+TGG | + | chr2.4:6184250-6184269 | None:intergenic | 45.0% | |
| ATTCTCACAGGACAATGCAC+AGG | - | chr2.4:6183009-6183028 | MS.gene31116:intron | 45.0% | |
| CAGCATGAGAACAAAGGAAG+AGG | - | chr2.4:6181374-6181393 | MS.gene31116:CDS | 45.0% | |
| CATGAGAACAAAGGAAGAGG+TGG | - | chr2.4:6181377-6181396 | MS.gene31116:CDS | 45.0% | |
| CCCTAGCAAAATGCAGTGTA+AGG | + | chr2.4:6184349-6184368 | None:intergenic | 45.0% | |
| CTCTCCTTCCTGTGTTTGAA+TGG | + | chr2.4:6183759-6183778 | None:intergenic | 45.0% | |
| CTTCTCAAAGAAGCCAGAGT+TGG | - | chr2.4:6183122-6183141 | MS.gene31116:intron | 45.0% | |
| GACCATCACTTATCCGATGT+TGG | + | chr2.4:6182097-6182116 | None:intergenic | 45.0% | |
| GTCAGACGGAATTGTAGTGA+TGG | - | chr2.4:6183875-6183894 | MS.gene31116:intron | 45.0% | |
| GTCAGGCCACACATTTAAGA+TGG | + | chr2.4:6182371-6182390 | None:intergenic | 45.0% | |
| GTCCAACATCGGATAAGTGA+TGG | - | chr2.4:6182092-6182111 | MS.gene31116:CDS | 45.0% | |
| TCAAATGAAAGTCCTCAGGG+AGG | - | chr2.4:6185460-6185479 | MS.gene31116:CDS | 45.0% | |
| TTGGCGACCAACATAGGAAA+TGG | - | chr2.4:6184240-6184259 | MS.gene31116:intron | 45.0% | |
| TTTCAGCGAGGTATACTGCT+CGG | - | chr2.4:6184396-6184415 | MS.gene31116:intron | 45.0% | |
| ! | CAACCAAATGGTTTTCAGCG+AGG | - | chr2.4:6184384-6184403 | MS.gene31116:intron | 45.0% |
| ! | CGATTTTGTGGGGTTGTGTT+AGG | - | chr2.4:6182160-6182179 | MS.gene31116:intron | 45.0% |
| ! | CTGCGGATTGTGGAAAATAG+CGG | + | chr2.4:6182033-6182052 | None:intergenic | 45.0% |
| ! | GATCATCACAAGTTTGGAGC+AGG | + | chr2.4:6183838-6183857 | None:intergenic | 45.0% |
| ! | GCCTTACACTGCATTTTGCT+AGG | - | chr2.4:6184345-6184364 | MS.gene31116:intron | 45.0% |
| ! | TATTCGGAGGCATGCGAATA+TGG | + | chr2.4:6184290-6184309 | None:intergenic | 45.0% |
| ! | TGCGGATTGTGGAAAATAGC+GGG | + | chr2.4:6182032-6182051 | None:intergenic | 45.0% |
| !! | ATAGCGGGCTGTTCAAATTC+CGG | + | chr2.4:6182017-6182036 | None:intergenic | 45.0% |
| AACTCCTCCCATAGGCTCTT+CGG | + | chr2.4:6185066-6185085 | None:intergenic | 50.0% | |
| AAGGAAAGCCGAAGAGCCTA+TGG | - | chr2.4:6185055-6185074 | MS.gene31116:intron | 50.0% | |
| ACACCAAGCAACAGCACTCA+AGG | - | chr2.4:6185511-6185530 | MS.gene31116:CDS | 50.0% | |
| AGGAAAGCCGAAGAGCCTAT+GGG | - | chr2.4:6185056-6185075 | MS.gene31116:intron | 50.0% | |
| AGTGGGCCTTTATCGTGTAC+CGG | - | chr2.4:6181995-6182014 | MS.gene31116:intron | 50.0% | |
| ATGCAACAAGGACCTACACG+TGG | - | chr2.4:6185353-6185372 | MS.gene31116:CDS | 50.0% | |
| ATGCAGGCTAAACTCATGGC+TGG | + | chr2.4:6184831-6184850 | None:intergenic | 50.0% | |
| CAAGAACTGGGAAGCTAGTG+CGG | - | chr2.4:6185026-6185045 | MS.gene31116:intron | 50.0% | |
| CACTCAAGGTGAAGCTAGCA+AGG | - | chr2.4:6185525-6185544 | MS.gene31116:CDS | 50.0% | |
| CCGGGTCAGCACTAAAATGA+CGG | - | chr2.4:6182623-6182642 | MS.gene31116:intron | 50.0% | |
| CTAGTGACATCCCTTTGTCC+CGG | + | chr2.4:6184909-6184928 | None:intergenic | 50.0% | |
| GTAGTTGTAAGAGCAAGGCG+TGG | - | chr2.4:6181419-6181438 | MS.gene31116:CDS | 50.0% | |
| TGATCACTCACCTGTCTGAG+AGG | - | chr2.4:6183853-6183872 | MS.gene31116:intron | 50.0% | |
| TGTCAACATCTTGCTGCTGC+AGG | - | chr2.4:6184735-6184754 | MS.gene31116:intron | 50.0% | |
| ! | CAAGGGAAACACAAGCGTTG+AGG | - | chr2.4:6185543-6185562 | MS.gene31116:CDS | 50.0% |
| ! | GTGTTGTCAACTGCGGATTG+TGG | + | chr2.4:6182043-6182062 | None:intergenic | 50.0% |
| ! | GTTTTGTGATTTGAGGGGCG+TGG | + | chr2.4:6183592-6183611 | None:intergenic | 50.0% |
| ! | TCACCTTGAGTGCTGTTGCT+TGG | + | chr2.4:6185517-6185536 | None:intergenic | 50.0% |
| !!! | CCGTCATTTTAGTGCTGACC+CGG | + | chr2.4:6182626-6182645 | None:intergenic | 50.0% |
| !!! | CGTCATTTTAGTGCTGACCC+GGG | + | chr2.4:6182625-6182644 | None:intergenic | 50.0% |
| AAAGCCGAAGAGCCTATGGG+AGG | - | chr2.4:6185059-6185078 | MS.gene31116:intron | 55.0% | |
| CACCTGTCTGAGAGGTCAGA+CGG | - | chr2.4:6183861-6183880 | MS.gene31116:intron | 55.0% | |
| CTCTCTCTCTCTTCCGCTGA+TGG | - | chr2.4:6182705-6182724 | MS.gene31116:intron | 55.0% | |
| GAGCCTATGGGAGGAGTTGT+CGG | - | chr2.4:6185068-6185087 | MS.gene31116:intron | 55.0% | |
| TCACCGACAACTCCTCCCAT+AGG | + | chr2.4:6185074-6185093 | None:intergenic | 55.0% | |
| TTCCGTCTGACCTCTCAGAC+AGG | + | chr2.4:6183866-6183885 | None:intergenic | 55.0% | |
| GAAGCTAGTGCGGCTGCACA+AGG | - | chr2.4:6185036-6185055 | MS.gene31116:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 6181254 | 6185624 | 6181254 | ID=MS.gene31116 |
| chr2.4 | mRNA | 6181254 | 6185624 | 6181254 | ID=MS.gene31116.t1;Parent=MS.gene31116 |
| chr2.4 | exon | 6185328 | 6185624 | 6185328 | ID=MS.gene31116.t1.exon1;Parent=MS.gene31116.t1 |
| chr2.4 | CDS | 6185328 | 6185624 | 6185328 | ID=cds.MS.gene31116.t1;Parent=MS.gene31116.t1 |
| chr2.4 | exon | 6183700 | 6183859 | 6183700 | ID=MS.gene31116.t1.exon2;Parent=MS.gene31116.t1 |
| chr2.4 | CDS | 6183700 | 6183859 | 6183700 | ID=cds.MS.gene31116.t1;Parent=MS.gene31116.t1 |
| chr2.4 | exon | 6182089 | 6182121 | 6182089 | ID=MS.gene31116.t1.exon3;Parent=MS.gene31116.t1 |
| chr2.4 | CDS | 6182089 | 6182121 | 6182089 | ID=cds.MS.gene31116.t1;Parent=MS.gene31116.t1 |
| chr2.4 | exon | 6181789 | 6181883 | 6181789 | ID=MS.gene31116.t1.exon4;Parent=MS.gene31116.t1 |
| chr2.4 | CDS | 6181789 | 6181883 | 6181789 | ID=cds.MS.gene31116.t1;Parent=MS.gene31116.t1 |
| chr2.4 | exon | 6181254 | 6181472 | 6181254 | ID=MS.gene31116.t1.exon5;Parent=MS.gene31116.t1 |
| chr2.4 | CDS | 6181254 | 6181472 | 6181254 | ID=cds.MS.gene31116.t1;Parent=MS.gene31116.t1 |
| Gene Sequence |
| Protein sequence |
