Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45727.t1 | XP_013456365.1 | 98 | 448 | 9 | 0 | 1 | 448 | 1 | 448 | 1.90E-233 | 818.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45727.t1 | Q94B35 | 73.2 | 459 | 107 | 3 | 5 | 448 | 8 | 465 | 2.4e-192 | 672.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45727.t1 | A0A072UM06 | 98.0 | 448 | 9 | 0 | 1 | 448 | 1 | 448 | 1.4e-233 | 818.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene45727 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene049170 | MS.gene45727 | 0.842873 | 1.98E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene45727 | 0.854549 | 1.14E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene45727 | 0.837939 | 3.87E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene45727 | 0.825571 | 4.36E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene45727 | 0.819406 | 1.18E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene45727 | 0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene45727 | 0.808965 | 2.39E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene45727 | 0.815036 | 1.14E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene45727 | 0.808313 | 3.29E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene45727 | -0.843223 | 1.60E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene45727 | 0.809196 | 2.13E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene45727 | 0.825156 | 5.47E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene45727 | 0.814683 | 1.36E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene45727 | 0.887677 | 1.16E-72 | -1.69E-46 |
| MS.gene050812 | MS.gene45727 | 0.821825 | 3.29E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene45727 | 0.828857 | 7.12E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene45727 | 0.838887 | 2.20E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene45727 | 0.834815 | 2.41E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene45727 | 0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene051521 | MS.gene45727 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene45727 | 0.847963 | 8.29E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene45727 | 0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene45727 | 0.808954 | 2.40E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene45727 | 0.844175 | 8.90E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene45727 | -0.843535 | 1.32E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene45727 | 0.870025 | 1.99E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene45727 | 0.905468 | 4.16E-80 | -1.69E-46 |
| MS.gene052253 | MS.gene45727 | 0.829841 | 4.11E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene45727 | 0.837459 | 5.14E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene45727 | 0.883971 | 2.85E-71 | -1.69E-46 |
| MS.gene052414 | MS.gene45727 | 0.8155 | 8.96E-52 | -1.69E-46 |
| MS.gene052469 | MS.gene45727 | 0.839874 | 1.22E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene45727 | 0.820929 | 5.29E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene45727 | 0.804212 | 2.41E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene45727 | 0.834723 | 2.54E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene45727 | 0.833458 | 5.27E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene45727 | 0.841205 | 5.47E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene45727 | 0.84057 | 8.03E-58 | -1.69E-46 |
| MS.gene053577 | MS.gene45727 | 0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene45727 | 0.83771 | 4.43E-57 | -1.69E-46 |
| MS.gene053928 | MS.gene45727 | 0.872747 | 2.51E-67 | -1.69E-46 |
| MS.gene054123 | MS.gene45727 | 0.860605 | 1.84E-63 | -1.69E-46 |
| MS.gene054183 | MS.gene45727 | 0.809221 | 2.11E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene45727 | 0.85987 | 3.07E-63 | -1.69E-46 |
| MS.gene054556 | MS.gene45727 | 0.864758 | 9.65E-65 | -1.69E-46 |
| MS.gene054719 | MS.gene45727 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene45727 | 0.842851 | 2.01E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene45727 | 0.851935 | 6.42E-61 | -1.69E-46 |
| MS.gene055369 | MS.gene45727 | 0.816404 | 5.63E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene45727 | 0.815914 | 7.24E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene45727 | 0.875649 | 2.61E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene45727 | 0.886797 | 2.50E-72 | -1.69E-46 |
| MS.gene05556 | MS.gene45727 | 0.818617 | 1.79E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene45727 | 0.822488 | 2.31E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene45727 | 0.810853 | 9.38E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene45727 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene055744 | MS.gene45727 | 0.830669 | 2.58E-55 | -1.69E-46 |
| MS.gene055859 | MS.gene45727 | 0.829903 | 3.97E-55 | -1.69E-46 |
| MS.gene05602 | MS.gene45727 | 0.806398 | 8.39E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene45727 | 0.903238 | 4.26E-79 | -1.69E-46 |
| MS.gene056410 | MS.gene45727 | 0.812059 | 5.13E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene45727 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene45727 | 0.800311 | 1.53E-48 | -1.69E-46 |
| MS.gene056612 | MS.gene45727 | 0.82545 | 4.66E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene45727 | 0.899668 | 1.58E-77 | -1.69E-46 |
| MS.gene056719 | MS.gene45727 | 0.843323 | 1.50E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene45727 | 0.824991 | 5.98E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene45727 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene45727 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene45727 | 0.830482 | 2.86E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene45727 | 0.833109 | 6.44E-56 | -1.69E-46 |
| MS.gene057032 | MS.gene45727 | 0.805371 | 1.38E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene45727 | 0.829059 | 6.36E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene45727 | 0.869977 | 2.07E-66 | -1.69E-46 |
| MS.gene057448 | MS.gene45727 | 0.842219 | 2.96E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene45727 | 0.821875 | 3.20E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene45727 | 0.850359 | 1.79E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene45727 | 0.825936 | 3.57E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene45727 | 0.831948 | 1.25E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene45727 | 0.821562 | 3.78E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene45727 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene45727 | 0.845746 | 3.35E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene45727 | 0.873331 | 1.60E-67 | -1.69E-46 |
| MS.gene058090 | MS.gene45727 | 0.806177 | 9.34E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene45727 | 0.843044 | 1.78E-58 | -1.69E-46 |
| MS.gene058120 | MS.gene45727 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene45727 | 0.859858 | 3.09E-63 | -1.69E-46 |
| MS.gene058276 | MS.gene45727 | 0.83169 | 1.45E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene45727 | 0.826099 | 3.27E-54 | -1.69E-46 |
| MS.gene058365 | MS.gene45727 | 0.862883 | 3.70E-64 | -1.69E-46 |
| MS.gene058371 | MS.gene45727 | 0.823853 | 1.11E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene45727 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene45727 | 0.878135 | 3.59E-69 | -1.69E-46 |
| MS.gene058710 | MS.gene45727 | 0.843278 | 1.55E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene45727 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene45727 | 0.854273 | 1.37E-61 | -1.69E-46 |
| MS.gene058949 | MS.gene45727 | 0.85869 | 6.93E-63 | -1.69E-46 |
| MS.gene059011 | MS.gene45727 | 0.821905 | 3.15E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene45727 | 0.858063 | 1.06E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene45727 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene45727 | 0.800088 | 1.70E-48 | -1.69E-46 |
| MS.gene059366 | MS.gene45727 | 0.812852 | 3.44E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene45727 | 0.851406 | 9.06E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene45727 | 0.819292 | 1.25E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene45727 | 0.858982 | 5.67E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene45727 | 0.868721 | 5.29E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene45727 | 0.847223 | 1.32E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene45727 | 0.855756 | 5.09E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene45727 | 0.85784 | 1.24E-62 | -1.69E-46 |
| MS.gene059788 | MS.gene45727 | 0.828698 | 7.78E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene45727 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene45727 | 0.832934 | 7.12E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene45727 | 0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene059899 | MS.gene45727 | 0.814513 | 1.48E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene45727 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene45727 | 0.826341 | 2.86E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene45727 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene45727 | 0.823502 | 1.34E-53 | -1.69E-46 |
| MS.gene060496 | MS.gene45727 | 0.841738 | 3.96E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene45727 | 0.803021 | 4.25E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene45727 | 0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene45727 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene45727 | 0.855511 | 6.01E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene45727 | -0.841291 | 5.20E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene45727 | 0.892934 | 1.00E-74 | -1.69E-46 |
| MS.gene061159 | MS.gene45727 | 0.831414 | 1.69E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45727.t1 | MTR_4g069030 | 99.107 | 448 | 4 | 0 | 1 | 448 | 1 | 448 | 0.0 | 928 |
| MS.gene45727.t1 | MTR_4g069070 | 87.723 | 448 | 54 | 1 | 1 | 448 | 1 | 447 | 0.0 | 822 |
| MS.gene45727.t1 | MTR_1g090787 | 77.536 | 138 | 31 | 0 | 112 | 249 | 92 | 229 | 1.58e-69 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45727.t1 | AT4G34350 | 77.124 | 459 | 89 | 3 | 5 | 448 | 8 | 465 | 0.0 | 744 |
Find 105 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAGACTTTGAAGGAAAA+TGG | 0.141165 | 4.4:-38517465 | MS.gene45727:CDS |
| ATTCTTGGTGGTGAATTTAA+TGG | 0.163592 | 4.4:-38516275 | MS.gene45727:CDS |
| ATTTAAATTTGCCCTTTCTA+AGG | 0.245365 | 4.4:-38516138 | MS.gene45727:CDS |
| AACGCGGAATTCCTTCTTAC+TGG | 0.255913 | 4.4:-38515547 | MS.gene45727:CDS |
| TTGTATGCTATTCTGTTTCC+TGG | 0.263735 | 4.4:+38515500 | None:intergenic |
| AGATTCTTACGGAAGAGTTT+TGG | 0.268289 | 4.4:+38518423 | None:intergenic |
| CCACAACCCAACTGTTAATA+AGG | 0.284593 | 4.4:-38517298 | MS.gene45727:intron |
| GATGTTACACCAATCCTTAA+TGG | 0.325134 | 4.4:+38515315 | None:intergenic |
| TTCTACCAAAGGGTCCATTA+AGG | 0.329049 | 4.4:-38515329 | MS.gene45727:CDS |
| GTAGTCATACTGCCTGCTTT+TGG | 0.349326 | 4.4:-38516740 | MS.gene45727:CDS |
| TTCATCAGGAAATTGTTTCC+TGG | 0.355179 | 4.4:+38517347 | None:intergenic |
| AGGACTATGATGCGTAAATA+TGG | 0.365077 | 4.4:-38515918 | MS.gene45727:CDS |
| TATGTTTGCGACTATATTCT+TGG | 0.365313 | 4.4:-38516290 | MS.gene45727:CDS |
| TCAAGGTGTTTGATTTGAAA+AGG | 0.366046 | 4.4:-38514996 | MS.gene45727:CDS |
| CCTTGTGACCAAAGCCTTTG+CGG | 0.366949 | 4.4:+38518379 | None:intergenic |
| TGTTTCTTCCCTTCTCCAAT+TGG | 0.369463 | 4.4:+38516788 | None:intergenic |
| AATTATAACCGCAAAGGCTT+TGG | 0.372584 | 4.4:-38518387 | MS.gene45727:CDS |
| AAATGCCTCTCTGGTTGAAC+TGG | 0.377526 | 4.4:+38516250 | None:intergenic |
| TTATGTTAGTTGTTGGTGGC+TGG | 0.411202 | 4.4:-38515610 | MS.gene45727:CDS |
| GTTCCTCGGCTATCTCTTGT+AGG | 0.412759 | 4.4:+38515567 | None:intergenic |
| CAAGCTGGTGGAGAAAGATA+TGG | 0.419899 | 4.4:-38515636 | MS.gene45727:CDS |
| TTAAGACTTTGAAGGAAAAT+GGG | 0.420831 | 4.4:-38517464 | MS.gene45727:CDS |
| CAAGGTGTTTGATTTGAAAA+GGG | 0.423274 | 4.4:-38514995 | MS.gene45727:CDS |
| TGGGTTGTGGATAATTTCAT+TGG | 0.423611 | 4.4:+38517311 | None:intergenic |
| CCTTATTAACAGTTGGGTTG+TGG | 0.426777 | 4.4:+38517298 | None:intergenic |
| AATATACCTTATTAACAGTT+GGG | 0.443511 | 4.4:+38517292 | None:intergenic |
| GAATATACCTTATTAACAGT+TGG | 0.443926 | 4.4:+38517291 | None:intergenic |
| GACTATACCTCGATAATTCA+TGG | 0.447725 | 4.4:-38516494 | MS.gene45727:CDS |
| CCAATCCTTAATGGACCCTT+TGG | 0.452397 | 4.4:+38515324 | None:intergenic |
| GGAACGTCGATGCGAGTGGC+GGG | 0.452613 | 4.4:+38518513 | None:intergenic |
| GTGATGCTAGCCGAATCCTT+TGG | 0.452734 | 4.4:-38517414 | MS.gene45727:CDS |
| GCAAGAGAAAATACCTTGTC+AGG | 0.454180 | 4.4:+38515279 | None:intergenic |
| CACTTCTTGTGAGATTCTTA+CGG | 0.455809 | 4.4:+38518412 | None:intergenic |
| ATTGACAGCGAGCAAAGAAT+TGG | 0.462963 | 4.4:-38515524 | MS.gene45727:CDS |
| TTCAAATTGCTTATGAAGCC+AGG | 0.465315 | 4.4:-38517365 | MS.gene45727:CDS |
| CAGTTGCTACGGTTTCCTCA+TGG | 0.466058 | 4.4:+38516462 | None:intergenic |
| CTCGCGATTCATGAGTTTGA+GGG | 0.471780 | 4.4:+38518350 | None:intergenic |
| GATCTTATGTTAGTTGTTGG+TGG | 0.473078 | 4.4:-38515614 | MS.gene45727:CDS |
| TTTAAATTTGCCCTTTCTAA+GGG | 0.475566 | 4.4:-38516137 | MS.gene45727:CDS |
| ATGGATCTTATGTTAGTTGT+TGG | 0.478899 | 4.4:-38515617 | MS.gene45727:CDS |
| GAAGTGCAGAATATTCCAAT+TGG | 0.482048 | 4.4:-38516803 | MS.gene45727:CDS |
| CACAATTTGTGATGCTACTC+AGG | 0.482457 | 4.4:-38515859 | MS.gene45727:intron |
| CCAACAAAATCCAAAGGATT+CGG | 0.483780 | 4.4:+38517404 | None:intergenic |
| CGGAGAAGAGTTTGCGGCAA+CGG | 0.485618 | 4.4:+38518475 | None:intergenic |
| TTAAGGATTGGTGTAACATC+TGG | 0.487090 | 4.4:-38515312 | MS.gene45727:CDS |
| TGACATCATTAAGACTTTGA+AGG | 0.488498 | 4.4:-38517472 | MS.gene45727:CDS |
| AACTTGCCCGTGGGTTTCAA+AGG | 0.489241 | 4.4:-38516660 | MS.gene45727:intron |
| AAAATGGGTTTGAGTATACA+TGG | 0.492239 | 4.4:-38517449 | MS.gene45727:CDS |
| AGAAGGAATTCCGCGTTCCT+CGG | 0.495852 | 4.4:+38515553 | None:intergenic |
| CAGAATATTCCAATTGGAGA+AGG | 0.503145 | 4.4:-38516797 | MS.gene45727:CDS |
| TCAACTGCGGCTCCAAAAGC+AGG | 0.503912 | 4.4:+38516728 | None:intergenic |
| GACAGTGACCTGGTAAAACT+TGG | 0.507138 | 4.4:-38516104 | MS.gene45727:CDS |
| CTTTCAGCATGGTGAGCTTG+TGG | 0.510724 | 4.4:-38515364 | MS.gene45727:intron |
| AGCAAAAGATGCAGTTGCTA+CGG | 0.513891 | 4.4:+38516451 | None:intergenic |
| AAAGAAAACTTTCTACCAAA+GGG | 0.517497 | 4.4:-38515339 | MS.gene45727:CDS |
| AGTTGCTACGGTTTCCTCAT+GGG | 0.518159 | 4.4:+38516463 | None:intergenic |
| AGAAGGGAAGAAACAATTTG+AGG | 0.519363 | 4.4:-38516780 | MS.gene45727:CDS |
| GATGCAGCGGCTAGAGGAGA+TGG | 0.525080 | 4.4:-38516825 | MS.gene45727:intron |
| CCGCAAAGGCTTTGGTCACA+AGG | 0.525512 | 4.4:-38518379 | MS.gene45727:CDS |
| GAGTTTGCGGCAACGGAAAG+TGG | 0.527303 | 4.4:+38518482 | None:intergenic |
| GAAAGAAAACTTTCTACCAA+AGG | 0.530120 | 4.4:-38515340 | MS.gene45727:CDS |
| CGTGGAAGATGCTCTTATCA+AGG | 0.542913 | 4.4:-38515013 | MS.gene45727:CDS |
| ACTCGCGATTCATGAGTTTG+AGG | 0.543010 | 4.4:+38518349 | None:intergenic |
| CTGGATCAAAGCCCTTAGAA+AGG | 0.544154 | 4.4:+38516126 | None:intergenic |
| AGAAAATACCTTGTCAGGTG+TGG | 0.545193 | 4.4:+38515284 | None:intergenic |
| TGGATCAAAGCCCTTAGAAA+GGG | 0.549420 | 4.4:+38516127 | None:intergenic |
| CCAAAGGGTCCATTAAGGAT+TGG | 0.551091 | 4.4:-38515324 | MS.gene45727:CDS |
| ACAATTTGAGGTTGTTAACA+AGG | 0.556630 | 4.4:-38516768 | MS.gene45727:CDS |
| AGCGAGCAAAGAATTGGTCC+AGG | 0.563565 | 4.4:-38515518 | MS.gene45727:CDS |
| AACGGACGGAGAAGAGTTTG+CGG | 0.566321 | 4.4:+38518469 | None:intergenic |
| ACAAGATGCTATTTACAAGC+TGG | 0.568463 | 4.4:-38515651 | MS.gene45727:CDS |
| CAACGGAAAGTGGTCGGAGA+AGG | 0.570889 | 4.4:+38518492 | None:intergenic |
| AATCGGCGTCGGCAGAGCAA+CGG | 0.576960 | 4.4:+38518451 | None:intergenic |
| AAATCAGACAACAATGCTCA+AGG | 0.577136 | 4.4:-38516075 | MS.gene45727:CDS |
| ATGATTGATGCAGCGGCTAG+AGG | 0.580973 | 4.4:-38516831 | MS.gene45727:intron |
| TCGCTGTCAATCCAGTAAGA+AGG | 0.582364 | 4.4:+38515536 | None:intergenic |
| AAATGGGTTTGAGTATACAT+GGG | 0.586456 | 4.4:-38517448 | MS.gene45727:CDS |
| GAACGTCGATGCGAGTGGCG+GGG | 0.586973 | 4.4:+38518514 | None:intergenic |
| GTTTGCGACTATATTCTTGG+TGG | 0.588117 | 4.4:-38516287 | MS.gene45727:CDS |
| CGTTGATACAACTTGCCCGT+GGG | 0.588283 | 4.4:-38516669 | MS.gene45727:CDS |
| AGGAACGTCGATGCGAGTGG+CGG | 0.589279 | 4.4:+38518512 | None:intergenic |
| ATAGATACCTTTGAAACCCA+CGG | 0.589835 | 4.4:+38516653 | None:intergenic |
| CTTTGATCCAGACAGTGACC+TGG | 0.605562 | 4.4:-38516114 | MS.gene45727:CDS |
| TGGTGCATCCACACCTGACA+AGG | 0.608493 | 4.4:-38515292 | MS.gene45727:intron |
| AGTGAGAATTATAACCGCAA+AGG | 0.609945 | 4.4:-38518393 | MS.gene45727:CDS |
| TTGCGGCAACGGAAAGTGGT+CGG | 0.611598 | 4.4:+38518486 | None:intergenic |
| CAAGAGATAGCCGAGGAACG+CGG | 0.611703 | 4.4:-38515563 | MS.gene45727:CDS |
| TGCGAGTGGCGGGGAGACGT+AGG | 0.612473 | 4.4:+38518523 | None:intergenic |
| AGATGCTATTTACAAGCTGG+TGG | 0.615477 | 4.4:-38515648 | MS.gene45727:CDS |
| CAATTTGAGGTTGTTAACAA+GGG | 0.615513 | 4.4:-38516767 | MS.gene45727:CDS |
| TCGTTGATACAACTTGCCCG+TGG | 0.618282 | 4.4:-38516670 | MS.gene45727:CDS |
| AATCAGACAACAATGCTCAA+GGG | 0.621380 | 4.4:-38516074 | MS.gene45727:CDS |
| AGAATATTCCAATTGGAGAA+GGG | 0.622085 | 4.4:-38516796 | MS.gene45727:CDS |
| TAGATACCTTTGAAACCCAC+GGG | 0.624793 | 4.4:+38516654 | None:intergenic |
| AAGGGAGAGACTGAAGAGAT+CGG | 0.626047 | 4.4:-38516056 | MS.gene45727:intron |
| AGAAGGAACGTCGATGCGAG+TGG | 0.626328 | 4.4:+38518509 | None:intergenic |
| TATGATGCGTAAATATGGCG+TGG | 0.636939 | 4.4:-38515913 | MS.gene45727:CDS |
| ATATTTACCATGAATTATCG+AGG | 0.639141 | 4.4:+38516487 | None:intergenic |
| TTATAGGCAGACTAGTGGAG+AGG | 0.648372 | 4.4:-38515938 | MS.gene45727:intron |
| TCATGGTAAATATGCCCATG+AGG | 0.657612 | 4.4:-38516477 | MS.gene45727:CDS |
| GGCGTCGGCAGAGCAACGGA+CGG | 0.660192 | 4.4:+38518455 | None:intergenic |
| AATGGGTTTGAGTATACATG+GGG | 0.674771 | 4.4:-38517447 | MS.gene45727:CDS |
| TGGATCCAGTTCAACCAGAG+AGG | 0.678385 | 4.4:-38516255 | MS.gene45727:CDS |
| GGTCAACATCTCGTCAACTG+CGG | 0.691748 | 4.4:+38516715 | None:intergenic |
| ACACCTACAAGAGATAGCCG+AGG | 0.737129 | 4.4:-38515570 | MS.gene45727:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATGTAAAATAAATA+TGG | - | chr4.4:38516459-38516478 | MS.gene45727:CDS | 10.0% |
| !! | AAAAGATGTAAAATAAATAT+GGG | - | chr4.4:38516460-38516479 | MS.gene45727:CDS | 10.0% |
| !! | GAAATTTAAATAAACTATAT+GGG | + | chr4.4:38518395-38518414 | None:intergenic | 10.0% |
| !! | TGAAATTTAAATAAACTATA+TGG | + | chr4.4:38518396-38518415 | None:intergenic | 10.0% |
| !! | ATACATAATTGTGAAAAATA+TGG | - | chr4.4:38517095-38517114 | MS.gene45727:intron | 15.0% |
| !! | TAAAATAAATATGGGTATAT+TGG | - | chr4.4:38516468-38516487 | MS.gene45727:CDS | 15.0% |
| !!! | CAACTTTTTTATTAGAATAA+TGG | + | chr4.4:38517824-38517843 | None:intergenic | 15.0% |
| !! | AATATACCTTATTAACAGTT+GGG | + | chr4.4:38516229-38516248 | None:intergenic | 20.0% |
| !! | AATTTCCTGATGAAAAAATT+TGG | - | chr4.4:38516180-38516199 | MS.gene45727:intron | 20.0% |
| !! | AGCATTAAAAAAACTTAGAT+TGG | + | chr4.4:38518456-38518475 | None:intergenic | 20.0% |
| !! | ATGTTGAATTTCTTTAGATA+TGG | - | chr4.4:38515613-38515632 | MS.gene45727:CDS | 20.0% |
| !! | TAATCTATCAGAAAAACTTA+TGG | + | chr4.4:38515808-38515827 | None:intergenic | 20.0% |
| !!! | AAGTCTTATTCAAATAAAGT+TGG | + | chr4.4:38515859-38515878 | None:intergenic | 20.0% |
| !!! | TATGTTGTTGATCATTTTAT+AGG | - | chr4.4:38517564-38517583 | MS.gene45727:intron | 20.0% |
| !!! | TGTGAATCTATAAAAACTTT+TGG | - | chr4.4:38518268-38518287 | MS.gene45727:intron | 20.0% |
| ! | AAAGAAAACTTTCTACCAAA+GGG | - | chr4.4:38518179-38518198 | MS.gene45727:intron | 25.0% |
| ! | ACTTAACAATTGGAAAATTC+AGG | + | chr4.4:38516274-38516293 | None:intergenic | 25.0% |
| ! | ATATTTACCATGAATTATCG+AGG | + | chr4.4:38517034-38517053 | None:intergenic | 25.0% |
| ! | ATTCATCGAAGAAATAATCT+CGG | + | chr4.4:38516962-38516981 | None:intergenic | 25.0% |
| ! | ATTTAAATTTGCCCTTTCTA+AGG | - | chr4.4:38517380-38517399 | MS.gene45727:CDS | 25.0% |
| ! | CAAATAATCACAACATTGAA+GGG | + | chr4.4:38517343-38517362 | None:intergenic | 25.0% |
| ! | CAATTGATCATGTAAAAAGA+CGG | + | chr4.4:38516649-38516668 | None:intergenic | 25.0% |
| ! | CTTGATGTTATTGCTTATTT+GGG | - | chr4.4:38517701-38517720 | MS.gene45727:intron | 25.0% |
| ! | GAATATACCTTATTAACAGT+TGG | + | chr4.4:38516230-38516249 | None:intergenic | 25.0% |
| ! | TATTATCAGCAAAAACTGAA+TGG | + | chr4.4:38518432-38518451 | None:intergenic | 25.0% |
| ! | TCAAATAATCACAACATTGA+AGG | + | chr4.4:38517344-38517363 | None:intergenic | 25.0% |
| ! | TTACAAAAAACTAACAAGAG+TGG | + | chr4.4:38518298-38518317 | None:intergenic | 25.0% |
| ! | TTTAAATTTGCCCTTTCTAA+GGG | - | chr4.4:38517381-38517400 | MS.gene45727:CDS | 25.0% |
| !! | AATGTAGTGGAAAATTCAAA+GGG | - | chr4.4:38516504-38516523 | MS.gene45727:CDS | 25.0% |
| !! | ACAAAGAAATTTTCTCAAGA+AGG | - | chr4.4:38516543-38516562 | MS.gene45727:intron | 25.0% |
| !! | ACAACAATATCTTCAAGTTA+AGG | + | chr4.4:38517173-38517192 | None:intergenic | 25.0% |
| !! | ATTAAGACTTTGAAGGAAAA+TGG | - | chr4.4:38516053-38516072 | MS.gene45727:intron | 25.0% |
| !! | TAATGTAGTGGAAAATTCAA+AGG | - | chr4.4:38516503-38516522 | MS.gene45727:CDS | 25.0% |
| !! | TGTGTAATGAAATATGCTTT+TGG | - | chr4.4:38518340-38518359 | MS.gene45727:intron | 25.0% |
| !! | TTAAGACTTTGAAGGAAAAT+GGG | - | chr4.4:38516054-38516073 | MS.gene45727:intron | 25.0% |
| !! | TTTTTATAGATTCACAAGCA+AGG | + | chr4.4:38518264-38518283 | None:intergenic | 25.0% |
| !!! | GTAATCCAAATTTTTTCATC+AGG | + | chr4.4:38516188-38516207 | None:intergenic | 25.0% |
| !!! | TAATGCTTATTTTGCATCAT+TGG | - | chr4.4:38518469-38518488 | MS.gene45727:CDS | 25.0% |
| !!! | TTCTTCGATGAATTGTTTTA+AGG | - | chr4.4:38516969-38516988 | MS.gene45727:intron | 25.0% |
| !!! | TTTGTTGTTCAATTGATTTG+TGG | - | chr4.4:38515548-38515567 | MS.gene45727:CDS | 25.0% |
| AAAAAACTAACAAGAGTGGA+AGG | + | chr4.4:38518294-38518313 | None:intergenic | 30.0% | |
| AAATATGGGTATATTGGTAG+AGG | - | chr4.4:38516474-38516493 | MS.gene45727:CDS | 30.0% | |
| AATAAGTGCTTCATAGAGTT+TGG | - | chr4.4:38515494-38515513 | MS.gene45727:CDS | 30.0% | |
| AATTGTGAAAAATATGGCAG+AGG | - | chr4.4:38517101-38517120 | MS.gene45727:intron | 30.0% | |
| ACATACGATGAGAAATTTGA+TGG | - | chr4.4:38515518-38515537 | MS.gene45727:CDS | 30.0% | |
| ACGGAGTATAACTTAACAAT+TGG | + | chr4.4:38516284-38516303 | None:intergenic | 30.0% | |
| AGAATATTCCAATTGGAGAA+GGG | - | chr4.4:38516722-38516741 | MS.gene45727:CDS | 30.0% | |
| ATAAGTTTATCCATCAAGAG+AGG | - | chr4.4:38516392-38516411 | MS.gene45727:intron | 30.0% | |
| ATGCTAAACAAGCTTAATTG+AGG | - | chr4.4:38515937-38515956 | MS.gene45727:intron | 30.0% | |
| ATGGATCTTATGTTAGTTGT+TGG | - | chr4.4:38517901-38517920 | MS.gene45727:intron | 30.0% | |
| ATGTTTACTGTATCAGATCT+TGG | + | chr4.4:38518079-38518098 | None:intergenic | 30.0% | |
| CAAAGGGGATCTTATAAAAA+GGG | - | chr4.4:38516520-38516539 | MS.gene45727:CDS | 30.0% | |
| CCAAATAAGCAATAACATCA+AGG | + | chr4.4:38517703-38517722 | None:intergenic | 30.0% | |
| CCTTGATGTTATTGCTTATT+TGG | - | chr4.4:38517700-38517719 | MS.gene45727:intron | 30.0% | |
| GAAAGAAAACTTTCTACCAA+AGG | - | chr4.4:38518178-38518197 | MS.gene45727:intron | 30.0% | |
| GAAAGTAACACACTTTATGA+TGG | + | chr4.4:38515326-38515345 | None:intergenic | 30.0% | |
| GCATAATTGAAAATTCATCC+AGG | - | chr4.4:38517200-38517219 | MS.gene45727:intron | 30.0% | |
| GTTGAATTGAATTTCCTTTC+AGG | - | chr4.4:38517840-38517859 | MS.gene45727:intron | 30.0% | |
| TAAGTTTATCCATCAAGAGA+GGG | - | chr4.4:38516393-38516412 | MS.gene45727:intron | 30.0% | |
| TAATGAACTAAGGTCTTCTT+TGG | + | chr4.4:38515970-38515989 | None:intergenic | 30.0% | |
| TAGAATAATGGCATACAGAA+TGG | + | chr4.4:38517812-38517831 | None:intergenic | 30.0% | |
| TAGAGGAACAATTAATGTAG+TGG | - | chr4.4:38516491-38516510 | MS.gene45727:CDS | 30.0% | |
| TATGTTTGCGACTATATTCT+TGG | - | chr4.4:38517228-38517247 | MS.gene45727:intron | 30.0% | |
| TCAAAGGGGATCTTATAAAA+AGG | - | chr4.4:38516519-38516538 | MS.gene45727:CDS | 30.0% | |
| TCAAGAAGGTCTTACATTTA+GGG | - | chr4.4:38516557-38516576 | MS.gene45727:intron | 30.0% | |
| TCATATAAGTGCTTCTGTAT+AGG | + | chr4.4:38515908-38515927 | None:intergenic | 30.0% | |
| TCGCTAATTGAGTTTATCTT+TGG | - | chr4.4:38515245-38515264 | MS.gene45727:intron | 30.0% | |
| TGACATCATTAAGACTTTGA+AGG | - | chr4.4:38516046-38516065 | MS.gene45727:intron | 30.0% | |
| TGGAAAATTCAGGAAATTGA+AGG | + | chr4.4:38516264-38516283 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTGAGTATACA+TGG | - | chr4.4:38516069-38516088 | MS.gene45727:CDS | 30.0% |
| ! | AAATGGGTTTGAGTATACAT+GGG | - | chr4.4:38516070-38516089 | MS.gene45727:CDS | 30.0% |
| ! | AATATGTTTTTCTGTCGCAA+TGG | - | chr4.4:38517786-38517805 | MS.gene45727:intron | 30.0% |
| ! | ACAATTTGAGGTTGTTAACA+AGG | - | chr4.4:38516750-38516769 | MS.gene45727:CDS | 30.0% |
| ! | ACACACTTTATGATGGAAAA+TGG | + | chr4.4:38515319-38515338 | None:intergenic | 30.0% |
| ! | ATGTAGTGGAAAATTCAAAG+GGG | - | chr4.4:38516505-38516524 | MS.gene45727:CDS | 30.0% |
| ! | CAATTTGAGGTTGTTAACAA+GGG | - | chr4.4:38516751-38516770 | MS.gene45727:CDS | 30.0% |
| ! | CTTCTGCTAACGTTTTTATT+GGG | + | chr4.4:38515778-38515797 | None:intergenic | 30.0% |
| ! | GCTTATTTGAGTTTATCTAG+TGG | - | chr4.4:38515682-38515701 | MS.gene45727:intron | 30.0% |
| ! | TATCTTTTCATCTTTCAGCA+TGG | - | chr4.4:38518143-38518162 | MS.gene45727:intron | 30.0% |
| ! | TGACTTATTTGAGTTTATCG+TGG | + | chr4.4:38515734-38515753 | None:intergenic | 30.0% |
| ! | TTGAACATTTTTCTCACTCA+AGG | + | chr4.4:38516827-38516846 | None:intergenic | 30.0% |
| !! | AAAGTGTGTTACTTTCTAGA+TGG | - | chr4.4:38515330-38515349 | MS.gene45727:CDS | 30.0% |
| !! | AAGTGTGTTACTTTCTAGAT+GGG | - | chr4.4:38515331-38515350 | MS.gene45727:CDS | 30.0% |
| !! | ATTCTTGGTGGTGAATTTAA+TGG | - | chr4.4:38517243-38517262 | MS.gene45727:intron | 30.0% |
| !! | CAAGGTGTTTGATTTGAAAA+GGG | - | chr4.4:38518523-38518542 | MS.gene45727:CDS | 30.0% |
| !! | TCAAGGTGTTTGATTTGAAA+AGG | - | chr4.4:38518522-38518541 | MS.gene45727:CDS | 30.0% |
| !!! | ATTTTTTTGCTGTGGAGTTA+AGG | - | chr4.4:38517489-38517508 | MS.gene45727:intron | 30.0% |
| !!! | CGATGAATTGTTTTAAGGTA+TGG | - | chr4.4:38516974-38516993 | MS.gene45727:intron | 30.0% |
| !!! | TTAGCGAAATTGTTTTGACT+TGG | + | chr4.4:38515232-38515251 | None:intergenic | 30.0% |
| !!! | TTTTTTTGCTGTGGAGTTAA+GGG | - | chr4.4:38517490-38517509 | MS.gene45727:intron | 30.0% |
| AAATAAGCCAATCCAAACAG+AGG | + | chr4.4:38515670-38515689 | None:intergenic | 35.0% | |
| AAATCAGACAACAATGCTCA+AGG | - | chr4.4:38517443-38517462 | MS.gene45727:CDS | 35.0% | |
| AAATTAACTCCCTCTCTTGA+TGG | + | chr4.4:38516405-38516424 | None:intergenic | 35.0% | |
| AATCAGACAACAATGCTCAA+GGG | - | chr4.4:38517444-38517463 | MS.gene45727:CDS | 35.0% | |
| AATTATAACCGCAAAGGCTT+TGG | - | chr4.4:38515131-38515150 | MS.gene45727:intron | 35.0% | |
| ACTAAGAGGGTCCTATATTT+AGG | + | chr4.4:38516308-38516327 | None:intergenic | 35.0% | |
| AGAAGGGAAGAAACAATTTG+AGG | - | chr4.4:38516738-38516757 | MS.gene45727:CDS | 35.0% | |
| AGGACTATGATGCGTAAATA+TGG | - | chr4.4:38517600-38517619 | MS.gene45727:intron | 35.0% | |
| AGTGAGAATTATAACCGCAA+AGG | - | chr4.4:38515125-38515144 | MS.gene45727:intron | 35.0% | |
| ATTCCCATGATTTGACTAAG+AGG | + | chr4.4:38516322-38516341 | None:intergenic | 35.0% | |
| CACACACTCATAATGAACTA+AGG | + | chr4.4:38515980-38515999 | None:intergenic | 35.0% | |
| CACTTCTTGTGAGATTCTTA+CGG | + | chr4.4:38515109-38515128 | None:intergenic | 35.0% | |
| CAGAATATTCCAATTGGAGA+AGG | - | chr4.4:38516721-38516740 | MS.gene45727:CDS | 35.0% | |
| CCAACAAAATCCAAAGGATT+CGG | + | chr4.4:38516117-38516136 | None:intergenic | 35.0% | |
| CTAAGAGGGTCCTATATTTA+GGG | + | chr4.4:38516307-38516326 | None:intergenic | 35.0% | |
| CTCAAGAAGGTCTTACATTT+AGG | - | chr4.4:38516556-38516575 | MS.gene45727:intron | 35.0% | |
| GAAGTGCAGAATATTCCAAT+TGG | - | chr4.4:38516715-38516734 | MS.gene45727:CDS | 35.0% | |
| GACTATACCTCGATAATTCA+TGG | - | chr4.4:38517024-38517043 | MS.gene45727:intron | 35.0% | |
| GATCTTATGTTAGTTGTTGG+TGG | - | chr4.4:38517904-38517923 | MS.gene45727:intron | 35.0% | |
| GATGTTACACCAATCCTTAA+TGG | + | chr4.4:38518206-38518225 | None:intergenic | 35.0% | |
| TATACTCCGTCCCTAAATAT+AGG | - | chr4.4:38516294-38516313 | MS.gene45727:CDS | 35.0% | |
| TCATGTAAAAAGACGGTATG+TGG | + | chr4.4:38516642-38516661 | None:intergenic | 35.0% | |
| TGGGTTGTGGATAATTTCAT+TGG | + | chr4.4:38516210-38516229 | None:intergenic | 35.0% | |
| TTCAAATTGCTTATGAAGCC+AGG | - | chr4.4:38516153-38516172 | MS.gene45727:intron | 35.0% | |
| TTCATCAGGAAATTGTTTCC+TGG | + | chr4.4:38516174-38516193 | None:intergenic | 35.0% | |
| TTCCCATGATTTGACTAAGA+GGG | + | chr4.4:38516321-38516340 | None:intergenic | 35.0% | |
| TTGTATGCTATTCTGTTTCC+TGG | + | chr4.4:38518021-38518040 | None:intergenic | 35.0% | |
| TTGTTCTTAGTTGCTGATAG+TGG | - | chr4.4:38517125-38517144 | MS.gene45727:intron | 35.0% | |
| ! | AATCCTTTGGATTTTGTTGG+GGG | - | chr4.4:38516117-38516136 | MS.gene45727:CDS | 35.0% |
| ! | AATGGGTTTGAGTATACATG+GGG | - | chr4.4:38516071-38516090 | MS.gene45727:CDS | 35.0% |
| ! | ACAAGATGCTATTTACAAGC+TGG | - | chr4.4:38517867-38517886 | MS.gene45727:intron | 35.0% |
| ! | AGATTCTTACGGAAGAGTTT+TGG | + | chr4.4:38515098-38515117 | None:intergenic | 35.0% |
| ! | CGAATCCTTTGGATTTTGTT+GGG | - | chr4.4:38516115-38516134 | MS.gene45727:CDS | 35.0% |
| ! | GAATCCTTTGGATTTTGTTG+GGG | - | chr4.4:38516116-38516135 | MS.gene45727:CDS | 35.0% |
| ! | GATTCTTACGGAAGAGTTTT+GGG | + | chr4.4:38515097-38515116 | None:intergenic | 35.0% |
| ! | GCTTCTGCTAACGTTTTTAT+TGG | + | chr4.4:38515779-38515798 | None:intergenic | 35.0% |
| ! | GTTGTCGAAAAGCACAAAAA+AGG | - | chr4.4:38517000-38517019 | MS.gene45727:intron | 35.0% |
| ! | TCATTTTATAGGCAGACTAG+TGG | - | chr4.4:38517575-38517594 | MS.gene45727:intron | 35.0% |
| ! | TGAGATTTTATGCCTCTGTT+TGG | - | chr4.4:38515655-38515674 | MS.gene45727:CDS | 35.0% |
| ! | TTAAGGATTGGTGTAACATC+TGG | - | chr4.4:38518206-38518225 | MS.gene45727:intron | 35.0% |
| ! | TTTTATGCCTCTGTTTGGAT+TGG | - | chr4.4:38515660-38515679 | MS.gene45727:intron | 35.0% |
| !! | ATAGATACCTTTGAAACCCA+CGG | + | chr4.4:38516868-38516887 | None:intergenic | 35.0% |
| !! | GTTCAATTGATTTGTGGAGA+TGG | - | chr4.4:38515554-38515573 | MS.gene45727:CDS | 35.0% |
| !! | TGTGCACTTTTTGTGATTTC+AGG | - | chr4.4:38516023-38516042 | MS.gene45727:intron | 35.0% |
| !!! | GAAGAGTTTTGGGTCAAAAT+CGG | + | chr4.4:38515087-38515106 | None:intergenic | 35.0% |
| !!! | TCGGTTAGATTTTTTTGCTG+TGG | - | chr4.4:38517481-38517500 | MS.gene45727:intron | 35.0% |
| ACGGTATGTGGAAGAAAACA+AGG | + | chr4.4:38516630-38516649 | None:intergenic | 40.0% | |
| AGAAAATACCTTGTCAGGTG+TGG | + | chr4.4:38518237-38518256 | None:intergenic | 40.0% | |
| AGCAAAAGATGCAGTTGCTA+CGG | + | chr4.4:38517070-38517089 | None:intergenic | 40.0% | |
| AGCAAGATCAACTACAAGAC+AGG | + | chr4.4:38517313-38517332 | None:intergenic | 40.0% | |
| ATTGACAGCGAGCAAAGAAT+TGG | - | chr4.4:38517994-38518013 | MS.gene45727:intron | 40.0% | |
| CACAATTTGTGATGCTACTC+AGG | - | chr4.4:38517659-38517678 | MS.gene45727:intron | 40.0% | |
| CCACAACCCAACTGTTAATA+AGG | - | chr4.4:38516220-38516239 | MS.gene45727:intron | 40.0% | |
| GACCCTCTTAGTCAAATCAT+GGG | - | chr4.4:38516316-38516335 | MS.gene45727:intron | 40.0% | |
| GCAAGAGAAAATACCTTGTC+AGG | + | chr4.4:38518242-38518261 | None:intergenic | 40.0% | |
| GTTTGCGACTATATTCTTGG+TGG | - | chr4.4:38517231-38517250 | MS.gene45727:intron | 40.0% | |
| TACATGCATCAGTGTCATGT+TGG | + | chr4.4:38515411-38515430 | None:intergenic | 40.0% | |
| TATGATGCGTAAATATGGCG+TGG | - | chr4.4:38517605-38517624 | MS.gene45727:intron | 40.0% | |
| TCATGGTAAATATGCCCATG+AGG | - | chr4.4:38517041-38517060 | MS.gene45727:intron | 40.0% | |
| TGCATCATTGGATTTCACAC+AGG | - | chr4.4:38518481-38518500 | MS.gene45727:CDS | 40.0% | |
| TGGATCAAAGCCCTTAGAAA+GGG | + | chr4.4:38517394-38517413 | None:intergenic | 40.0% | |
| TGTTTCTTCCCTTCTCCAAT+TGG | + | chr4.4:38516733-38516752 | None:intergenic | 40.0% | |
| TTCAGGAAATTGAAGGCGAT+AGG | + | chr4.4:38516257-38516276 | None:intergenic | 40.0% | |
| TTCTACCAAAGGGTCCATTA+AGG | - | chr4.4:38518189-38518208 | MS.gene45727:intron | 40.0% | |
| ! | AGATGCTATTTACAAGCTGG+TGG | - | chr4.4:38517870-38517889 | MS.gene45727:intron | 40.0% |
| ! | ATCCTTTGGATTTTGTTGGG+GGG | - | chr4.4:38516118-38516137 | MS.gene45727:CDS | 40.0% |
| ! | CCGAATCCTTTGGATTTTGT+TGG | - | chr4.4:38516114-38516133 | MS.gene45727:CDS | 40.0% |
| ! | CCTTATTAACAGTTGGGTTG+TGG | + | chr4.4:38516223-38516242 | None:intergenic | 40.0% |
| ! | TTGCAATGCCAAGTTTTACC+AGG | + | chr4.4:38517425-38517444 | None:intergenic | 40.0% |
| !! | TAGATACCTTTGAAACCCAC+GGG | + | chr4.4:38516867-38516886 | None:intergenic | 40.0% |
| !! | TTATGTTAGTTGTTGGTGGC+TGG | - | chr4.4:38517908-38517927 | MS.gene45727:intron | 40.0% |
| AAATGCCTCTCTGGTTGAAC+TGG | + | chr4.4:38517271-38517290 | None:intergenic | 45.0% | |
| AACCCCCCAACAAAATCCAA+AGG | + | chr4.4:38516123-38516142 | None:intergenic | 45.0% | |
| AACCTCGAAAAATGCCTCTC+TGG | + | chr4.4:38517280-38517299 | None:intergenic | 45.0% | |
| AACGCGGAATTCCTTCTTAC+TGG | - | chr4.4:38517971-38517990 | MS.gene45727:intron | 45.0% | |
| AAGGGAGAGACTGAAGAGAT+CGG | - | chr4.4:38517462-38517481 | MS.gene45727:CDS | 45.0% | |
| ACTCGCGATTCATGAGTTTG+AGG | + | chr4.4:38515172-38515191 | None:intergenic | 45.0% | |
| AGTCGCAAACATATTCAGCC+TGG | + | chr4.4:38517221-38517240 | None:intergenic | 45.0% | |
| AGTTGCTACGGTTTCCTCAT+GGG | + | chr4.4:38517058-38517077 | None:intergenic | 45.0% | |
| ATTGGATTTCACACAGGTCG+TGG | - | chr4.4:38518487-38518506 | MS.gene45727:CDS | 45.0% | |
| CAAGCTGGTGGAGAAAGATA+TGG | - | chr4.4:38517882-38517901 | MS.gene45727:intron | 45.0% | |
| CATCAGTGTCATGTTGGTGT+CGG | + | chr4.4:38515405-38515424 | None:intergenic | 45.0% | |
| CCAAAGGGTCCATTAAGGAT+TGG | - | chr4.4:38518194-38518213 | MS.gene45727:intron | 45.0% | |
| CGTGGAAGATGCTCTTATCA+AGG | - | chr4.4:38518505-38518524 | MS.gene45727:CDS | 45.0% | |
| CTCGCGATTCATGAGTTTGA+GGG | + | chr4.4:38515171-38515190 | None:intergenic | 45.0% | |
| CTGGATCAAAGCCCTTAGAA+AGG | + | chr4.4:38517395-38517414 | None:intergenic | 45.0% | |
| GACAGTGACCTGGTAAAACT+TGG | - | chr4.4:38517414-38517433 | MS.gene45727:CDS | 45.0% | |
| GAGGGTCCTATATTTAGGGA+CGG | + | chr4.4:38516303-38516322 | None:intergenic | 45.0% | |
| GGACCCTCTTAGTCAAATCA+TGG | - | chr4.4:38516315-38516334 | MS.gene45727:intron | 45.0% | |
| GGTCTTACATTTAGGGACAG+AGG | - | chr4.4:38516564-38516583 | MS.gene45727:intron | 45.0% | |
| TCGCTGTCAATCCAGTAAGA+AGG | + | chr4.4:38517985-38518004 | None:intergenic | 45.0% | |
| TGGGACTTTACGACTCTGTT+TGG | + | chr4.4:38515759-38515778 | None:intergenic | 45.0% | |
| TGTGGAAGAAAACAAGGCAC+AGG | + | chr4.4:38516624-38516643 | None:intergenic | 45.0% | |
| TTATAGGCAGACTAGTGGAG+AGG | - | chr4.4:38517580-38517599 | MS.gene45727:intron | 45.0% | |
| ! | AGTTTTACCAGGTCACTGTC+TGG | + | chr4.4:38517414-38517433 | None:intergenic | 45.0% |
| ! | ATTTTGTTGGGGGGTTGAGA+GGG | - | chr4.4:38516127-38516146 | MS.gene45727:CDS | 45.0% |
| ! | CCAATCCTTAATGGACCCTT+TGG | + | chr4.4:38518197-38518216 | None:intergenic | 45.0% |
| ! | GTAGCAACTGCATCTTTTGC+TGG | - | chr4.4:38517069-38517088 | MS.gene45727:intron | 45.0% |
| ! | GTAGTCATACTGCCTGCTTT+TGG | - | chr4.4:38516778-38516797 | MS.gene45727:CDS | 45.0% |
| ! | GTGCTTGATGATTGATGCAG+CGG | - | chr4.4:38516680-38516699 | MS.gene45727:CDS | 45.0% |
| !! | TTTTGGGTCAAAATCGGCGT+CGG | + | chr4.4:38515081-38515100 | None:intergenic | 45.0% |
| !!! | AACCAGAGAGGCATTTTTCG+AGG | - | chr4.4:38517275-38517294 | MS.gene45727:intron | 45.0% |
| AACGGACGGAGAAGAGTTTG+CGG | + | chr4.4:38515052-38515071 | None:intergenic | 50.0% | |
| AACTTGCCCGTGGGTTTCAA+AGG | - | chr4.4:38516858-38516877 | MS.gene45727:intron | 50.0% | |
| ACACCTACAAGAGATAGCCG+AGG | - | chr4.4:38517948-38517967 | MS.gene45727:intron | 50.0% | |
| AGAAGGAATTCCGCGTTCCT+CGG | + | chr4.4:38517968-38517987 | None:intergenic | 50.0% | |
| AGCATCTTGTCGCTCCTGAA+AGG | + | chr4.4:38517857-38517876 | None:intergenic | 50.0% | |
| AGCGAGCAAAGAATTGGTCC+AGG | - | chr4.4:38518000-38518019 | MS.gene45727:intron | 50.0% | |
| ATGATTGATGCAGCGGCTAG+AGG | - | chr4.4:38516687-38516706 | MS.gene45727:CDS | 50.0% | |
| CAGTTGCTACGGTTTCCTCA+TGG | + | chr4.4:38517059-38517078 | None:intergenic | 50.0% | |
| CCTTGTGACCAAAGCCTTTG+CGG | + | chr4.4:38515142-38515161 | None:intergenic | 50.0% | |
| CGTTGATACAACTTGCCCGT+GGG | - | chr4.4:38516849-38516868 | MS.gene45727:intron | 50.0% | |
| CTTTCAGCATGGTGAGCTTG+TGG | - | chr4.4:38518154-38518173 | MS.gene45727:intron | 50.0% | |
| CTTTGATCCAGACAGTGACC+TGG | - | chr4.4:38517404-38517423 | MS.gene45727:CDS | 50.0% | |
| GGAAGAAAACAAGGCACAGG+CGG | + | chr4.4:38516621-38516640 | None:intergenic | 50.0% | |
| GGTCAACATCTCGTCAACTG+CGG | + | chr4.4:38516806-38516825 | None:intergenic | 50.0% | |
| GTGATGCTAGCCGAATCCTT+TGG | - | chr4.4:38516104-38516123 | MS.gene45727:CDS | 50.0% | |
| GTTCCTCGGCTATCTCTTGT+AGG | + | chr4.4:38517954-38517973 | None:intergenic | 50.0% | |
| TCGTTGATACAACTTGCCCG+TGG | - | chr4.4:38516848-38516867 | MS.gene45727:intron | 50.0% | |
| TGGATCCAGTTCAACCAGAG+AGG | - | chr4.4:38517263-38517282 | MS.gene45727:intron | 50.0% | |
| ! | GATTTTGTTGGGGGGTTGAG+AGG | - | chr4.4:38516126-38516145 | MS.gene45727:CDS | 50.0% |
| AGAAGGAACGTCGATGCGAG+TGG | + | chr4.4:38515012-38515031 | None:intergenic | 55.0% | |
| CAACGGAAAGTGGTCGGAGA+AGG | + | chr4.4:38515029-38515048 | None:intergenic | 55.0% | |
| CAAGAGATAGCCGAGGAACG+CGG | - | chr4.4:38517955-38517974 | MS.gene45727:intron | 55.0% | |
| CGGAGAAGAGTTTGCGGCAA+CGG | + | chr4.4:38515046-38515065 | None:intergenic | 55.0% | |
| GAGTTTGCGGCAACGGAAAG+TGG | + | chr4.4:38515039-38515058 | None:intergenic | 55.0% | |
| TCAACTGCGGCTCCAAAAGC+AGG | + | chr4.4:38516793-38516812 | None:intergenic | 55.0% | |
| TGGTGCATCCACACCTGACA+AGG | - | chr4.4:38518226-38518245 | MS.gene45727:intron | 55.0% | |
| TTGCGGCAACGGAAAGTGGT+CGG | + | chr4.4:38515035-38515054 | None:intergenic | 55.0% | |
| ! | CCGCAAAGGCTTTGGTCACA+AGG | - | chr4.4:38515139-38515158 | MS.gene45727:intron | 55.0% |
| AGGAACGTCGATGCGAGTGG+CGG | + | chr4.4:38515009-38515028 | None:intergenic | 60.0% | |
| GATGCAGCGGCTAGAGGAGA+TGG | - | chr4.4:38516693-38516712 | MS.gene45727:CDS | 60.0% | |
| !! | AATCGGCGTCGGCAGAGCAA+CGG | + | chr4.4:38515070-38515089 | None:intergenic | 60.0% |
| GAACGTCGATGCGAGTGGCG+GGG | + | chr4.4:38515007-38515026 | None:intergenic | 65.0% | |
| GGAACGTCGATGCGAGTGGC+GGG | + | chr4.4:38515008-38515027 | None:intergenic | 65.0% | |
| ! | TGCGAGTGGCGGGGAGACGT+AGG | + | chr4.4:38514998-38515017 | None:intergenic | 70.0% |
| !! | GGCGTCGGCAGAGCAACGGA+CGG | + | chr4.4:38515066-38515085 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38514972 | 38518568 | 38514972 | ID=MS.gene45727 |
| chr4.4 | mRNA | 38514972 | 38518568 | 38514972 | ID=MS.gene45727.t1;Parent=MS.gene45727 |
| chr4.4 | exon | 38518343 | 38518568 | 38518343 | ID=MS.gene45727.t1.exon1;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38518343 | 38518568 | 38518343 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38517299 | 38517495 | 38517299 | ID=MS.gene45727.t1.exon2;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38517299 | 38517495 | 38517299 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38516661 | 38516840 | 38516661 | ID=MS.gene45727.t1.exon3;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38516661 | 38516840 | 38516661 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38516418 | 38516549 | 38516418 | ID=MS.gene45727.t1.exon4;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38516418 | 38516549 | 38516418 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38516244 | 38516318 | 38516244 | ID=MS.gene45727.t1.exon5;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38516244 | 38516318 | 38516244 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38516057 | 38516162 | 38516057 | ID=MS.gene45727.t1.exon6;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38516057 | 38516162 | 38516057 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38515860 | 38515954 | 38515860 | ID=MS.gene45727.t1.exon7;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38515860 | 38515954 | 38515860 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38515493 | 38515678 | 38515493 | ID=MS.gene45727.t1.exon8;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38515493 | 38515678 | 38515493 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38515293 | 38515379 | 38515293 | ID=MS.gene45727.t1.exon9;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38515293 | 38515379 | 38515293 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| chr4.4 | exon | 38514972 | 38515037 | 38514972 | ID=MS.gene45727.t1.exon10;Parent=MS.gene45727.t1 |
| chr4.4 | CDS | 38514972 | 38515037 | 38514972 | ID=cds.MS.gene45727.t1;Parent=MS.gene45727.t1 |
| Gene Sequence |
| Protein sequence |
