Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063268.t1 | XP_013446977.1 | 93.9 | 280 | 17 | 0 | 1 | 280 | 45 | 324 | 2.60E-151 | 544.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063268.t1 | P0DKC5 | 51.1 | 264 | 116 | 3 | 4 | 255 | 48 | 310 | 2.3e-71 | 270.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063268.t1 | A0A072TU08 | 93.9 | 280 | 17 | 0 | 1 | 280 | 45 | 324 | 1.9e-151 | 544.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049491 | MS.gene063268 | 0.824488 | 7.85E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene063268 | 0.801191 | 1.01E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene063268 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene063268 | 0.809753 | 1.62E-50 | -1.69E-46 |
| MS.gene050581 | MS.gene063268 | 0.835993 | 1.21E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene063268 | 0.828981 | 6.64E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene063268 | 0.829637 | 4.60E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene063268 | 0.833319 | 5.71E-56 | -1.69E-46 |
| MS.gene051255 | MS.gene063268 | 0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene063268 | 0.821409 | 4.10E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene063268 | 0.804426 | 2.17E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene063268 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene063268 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene052287 | MS.gene063268 | 0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene063268 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene063268 | 0.801651 | 8.14E-49 | -1.69E-46 |
| MS.gene05296 | MS.gene063268 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene063268 | 0.815591 | 8.55E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene063268 | 0.821995 | 3.00E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene063268 | 0.82122 | 4.53E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene063268 | 0.830981 | 2.16E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene063268 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene055254 | MS.gene063268 | 0.82741 | 1.59E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene063268 | 0.830132 | 3.49E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene063268 | 0.842879 | 1.97E-58 | -1.69E-46 |
| MS.gene056314 | MS.gene063268 | 0.805329 | 1.41E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene063268 | 0.8245 | 7.80E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene063268 | 0.817174 | 3.78E-52 | -1.69E-46 |
| MS.gene056611 | MS.gene063268 | 0.808393 | 3.17E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene063268 | 0.848525 | 5.80E-60 | -1.69E-46 |
| MS.gene056933 | MS.gene063268 | 0.844956 | 5.48E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene063268 | 0.832262 | 1.05E-55 | -1.69E-46 |
| MS.gene05733 | MS.gene063268 | 0.815668 | 8.22E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene063268 | 0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene058459 | MS.gene063268 | 0.804754 | 1.86E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene063268 | 0.822215 | 2.67E-53 | -1.69E-46 |
| MS.gene058903 | MS.gene063268 | 0.831744 | 1.40E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene063268 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene063268 | 0.804679 | 1.92E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene063268 | 0.808907 | 2.46E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene063268 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene063268 | 0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene063268 | 0.827943 | 1.18E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene063268 | 0.821276 | 4.40E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene063268 | 0.844087 | 9.40E-59 | -1.69E-46 |
| MS.gene059974 | MS.gene063268 | 0.907507 | 4.71E-81 | -1.69E-46 |
| MS.gene060005 | MS.gene063268 | 0.862053 | 6.65E-64 | -1.69E-46 |
| MS.gene060356 | MS.gene063268 | 0.805483 | 1.31E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene063268 | 0.834778 | 2.46E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene063268 | 0.827854 | 1.24E-54 | -1.69E-46 |
| MS.gene060799 | MS.gene063268 | 0.809872 | 1.53E-50 | -1.69E-46 |
| MS.gene060800 | MS.gene063268 | 0.822659 | 2.10E-53 | -1.69E-46 |
| MS.gene060801 | MS.gene063268 | 0.806286 | 8.86E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene063268 | 0.80302 | 4.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063268.t1 | MTR_8g096580 | 93.929 | 280 | 17 | 0 | 1 | 280 | 45 | 324 | 0.0 | 550 |
| MS.gene063268.t1 | MTR_8g096620 | 50.566 | 265 | 117 | 2 | 4 | 255 | 48 | 311 | 3.54e-92 | 276 |
| MS.gene063268.t1 | MTR_5g008850 | 43.233 | 266 | 136 | 4 | 1 | 252 | 45 | 309 | 3.91e-67 | 213 |
| MS.gene063268.t1 | MTR_8g096610 | 58.639 | 191 | 60 | 6 | 82 | 267 | 54 | 230 | 6.88e-65 | 203 |
| MS.gene063268.t1 | MTR_4g052350 | 30.667 | 225 | 148 | 5 | 1 | 220 | 14 | 235 | 3.43e-21 | 90.5 |
| MS.gene063268.t1 | MTR_4g052340 | 32.143 | 196 | 122 | 4 | 1 | 191 | 14 | 203 | 1.21e-19 | 86.7 |
| MS.gene063268.t1 | MTR_4g052300 | 30.263 | 228 | 145 | 6 | 1 | 220 | 8 | 229 | 1.68e-19 | 85.9 |
| MS.gene063268.t1 | MTR_4g052320 | 29.258 | 229 | 147 | 5 | 1 | 220 | 8 | 230 | 2.66e-19 | 85.5 |
| MS.gene063268.t1 | MTR_7g105590 | 30.366 | 191 | 122 | 4 | 1 | 186 | 8 | 192 | 4.78e-19 | 83.2 |
| MS.gene063268.t1 | MTR_7g080410 | 28.906 | 256 | 168 | 8 | 1 | 249 | 38 | 286 | 5.00e-18 | 82.8 |
| MS.gene063268.t1 | MTR_4g097510 | 31.088 | 193 | 124 | 5 | 2 | 191 | 3 | 189 | 7.79e-18 | 81.6 |
| MS.gene063268.t1 | MTR_7g080410 | 32.124 | 193 | 125 | 5 | 1 | 188 | 38 | 229 | 1.54e-17 | 80.9 |
| MS.gene063268.t1 | MTR_3g087850 | 33.333 | 192 | 117 | 6 | 2 | 190 | 27 | 210 | 1.90e-17 | 80.9 |
| MS.gene063268.t1 | MTR_3g085740 | 32.243 | 214 | 133 | 8 | 1 | 207 | 75 | 283 | 2.17e-17 | 80.9 |
| MS.gene063268.t1 | MTR_6g023610 | 29.293 | 198 | 125 | 7 | 4 | 193 | 16 | 206 | 8.86e-17 | 78.6 |
| MS.gene063268.t1 | MTR_7g071680 | 29.756 | 205 | 133 | 6 | 1 | 198 | 29 | 229 | 6.23e-16 | 76.6 |
| MS.gene063268.t1 | MTR_8g442750 | 33.000 | 200 | 113 | 7 | 1 | 186 | 14 | 206 | 1.71e-15 | 75.5 |
| MS.gene063268.t1 | MTR_7g107670 | 31.959 | 194 | 118 | 7 | 1 | 188 | 33 | 218 | 3.12e-15 | 74.7 |
| MS.gene063268.t1 | MTR_7g110140 | 33.831 | 201 | 126 | 4 | 1 | 198 | 6 | 202 | 3.66e-15 | 73.9 |
| MS.gene063268.t1 | MTR_4g086400 | 27.778 | 198 | 132 | 3 | 7 | 193 | 10 | 207 | 4.82e-15 | 75.5 |
| MS.gene063268.t1 | MTR_4g078630 | 30.769 | 195 | 126 | 3 | 4 | 195 | 22 | 210 | 5.46e-15 | 73.6 |
| MS.gene063268.t1 | MTR_3g087860 | 35.606 | 132 | 81 | 3 | 61 | 190 | 66 | 195 | 1.38e-14 | 72.4 |
| MS.gene063268.t1 | MTR_4g086410 | 26.263 | 198 | 135 | 3 | 7 | 193 | 10 | 207 | 2.02e-14 | 73.6 |
| MS.gene063268.t1 | MTR_6g023910 | 26.396 | 197 | 138 | 4 | 1 | 193 | 13 | 206 | 6.80e-14 | 70.5 |
| MS.gene063268.t1 | MTR_2g090165 | 28.889 | 225 | 140 | 6 | 1 | 210 | 6 | 225 | 1.69e-13 | 69.3 |
| MS.gene063268.t1 | MTR_7g113650 | 28.230 | 209 | 141 | 4 | 1 | 202 | 40 | 246 | 1.80e-13 | 69.3 |
| MS.gene063268.t1 | MTR_7g083870 | 29.469 | 207 | 115 | 8 | 1 | 192 | 35 | 225 | 5.64e-13 | 68.2 |
| MS.gene063268.t1 | MTR_4g084800 | 33.588 | 131 | 80 | 3 | 1 | 127 | 13 | 140 | 7.98e-13 | 65.1 |
| MS.gene063268.t1 | MTR_3g020670 | 30.392 | 204 | 125 | 7 | 4 | 198 | 19 | 214 | 1.66e-12 | 66.6 |
| MS.gene063268.t1 | MTR_6g035395 | 33.505 | 194 | 93 | 9 | 1 | 183 | 5 | 173 | 1.78e-12 | 66.2 |
| MS.gene063268.t1 | MTR_7g105460 | 29.798 | 198 | 128 | 5 | 1 | 193 | 13 | 204 | 2.22e-12 | 66.2 |
| MS.gene063268.t1 | MTR_6g023590 | 26.500 | 200 | 128 | 6 | 4 | 193 | 16 | 206 | 4.12e-12 | 65.1 |
| MS.gene063268.t1 | MTR_4g132850 | 25.521 | 192 | 132 | 5 | 4 | 191 | 10 | 194 | 6.01e-12 | 64.7 |
| MS.gene063268.t1 | MTR_4g058840 | 26.923 | 234 | 146 | 10 | 4 | 218 | 14 | 241 | 6.28e-12 | 64.7 |
| MS.gene063268.t1 | MTR_4g058820 | 26.923 | 234 | 146 | 10 | 4 | 218 | 14 | 241 | 6.28e-12 | 64.7 |
| MS.gene063268.t1 | MTR_7g110130 | 29.187 | 209 | 130 | 6 | 1 | 200 | 6 | 205 | 1.36e-11 | 63.9 |
| MS.gene063268.t1 | MTR_7g105580 | 26.064 | 188 | 110 | 5 | 1 | 183 | 8 | 171 | 4.91e-11 | 62.0 |
| MS.gene063268.t1 | MTR_2g022600 | 29.231 | 195 | 121 | 5 | 6 | 189 | 38 | 226 | 5.72e-11 | 62.8 |
| MS.gene063268.t1 | MTR_4g058810 | 26.923 | 234 | 146 | 10 | 4 | 218 | 14 | 241 | 7.58e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063268.t1 | AT5G50600 | 51.136 | 264 | 116 | 3 | 4 | 255 | 48 | 310 | 3.50e-90 | 271 |
| MS.gene063268.t1 | AT5G50700 | 51.136 | 264 | 116 | 3 | 4 | 255 | 48 | 310 | 3.50e-90 | 271 |
| MS.gene063268.t1 | AT5G50770 | 50.192 | 261 | 117 | 2 | 4 | 252 | 48 | 307 | 2.15e-86 | 261 |
| MS.gene063268.t1 | AT3G47360 | 50.951 | 263 | 128 | 1 | 3 | 265 | 47 | 308 | 2.80e-86 | 260 |
| MS.gene063268.t1 | AT3G47350 | 50.763 | 262 | 128 | 1 | 4 | 265 | 47 | 307 | 4.48e-86 | 259 |
| MS.gene063268.t1 | AT5G50690 | 53.441 | 247 | 110 | 3 | 4 | 247 | 48 | 292 | 2.52e-85 | 257 |
| MS.gene063268.t1 | AT5G50590 | 53.441 | 247 | 110 | 3 | 4 | 247 | 48 | 292 | 2.52e-85 | 257 |
| MS.gene063268.t1 | AT3G47350 | 53.488 | 215 | 99 | 1 | 4 | 218 | 47 | 260 | 1.40e-72 | 226 |
| MS.gene063268.t1 | AT4G10020 | 46.124 | 258 | 129 | 4 | 1 | 249 | 47 | 303 | 5.21e-71 | 224 |
| MS.gene063268.t1 | AT5G50690 | 57.838 | 185 | 77 | 1 | 4 | 188 | 48 | 231 | 3.56e-70 | 217 |
| MS.gene063268.t1 | AT5G50590 | 57.838 | 185 | 77 | 1 | 4 | 188 | 48 | 231 | 3.56e-70 | 217 |
| MS.gene063268.t1 | AT3G47350 | 42.748 | 262 | 105 | 2 | 4 | 265 | 47 | 263 | 2.32e-59 | 190 |
| MS.gene063268.t1 | AT5G10050 | 31.863 | 204 | 112 | 6 | 2 | 194 | 6 | 193 | 1.44e-20 | 89.4 |
| MS.gene063268.t1 | AT3G03330 | 29.455 | 275 | 184 | 8 | 1 | 267 | 41 | 313 | 5.39e-20 | 88.6 |
| MS.gene063268.t1 | AT5G65205 | 31.343 | 201 | 111 | 6 | 2 | 191 | 7 | 191 | 5.57e-18 | 82.0 |
| MS.gene063268.t1 | AT1G49670 | 32.143 | 196 | 122 | 4 | 7 | 191 | 10 | 205 | 1.30e-17 | 83.2 |
| MS.gene063268.t1 | AT1G49670 | 32.143 | 196 | 122 | 4 | 7 | 191 | 10 | 205 | 1.38e-17 | 82.8 |
| MS.gene063268.t1 | AT1G24360 | 31.925 | 213 | 135 | 7 | 1 | 207 | 74 | 282 | 7.10e-17 | 79.7 |
| MS.gene063268.t1 | AT3G51680 | 31.707 | 205 | 128 | 5 | 1 | 196 | 32 | 233 | 3.39e-16 | 77.4 |
| MS.gene063268.t1 | AT1G54870 | 30.542 | 203 | 130 | 5 | 4 | 198 | 85 | 284 | 1.33e-15 | 76.3 |
| MS.gene063268.t1 | AT1G54870 | 30.542 | 203 | 130 | 5 | 4 | 198 | 87 | 286 | 1.34e-15 | 76.3 |
| MS.gene063268.t1 | AT1G52340 | 30.846 | 201 | 130 | 4 | 4 | 198 | 21 | 218 | 3.98e-15 | 74.3 |
| MS.gene063268.t1 | AT3G26770 | 30.102 | 196 | 128 | 6 | 1 | 192 | 41 | 231 | 6.97e-15 | 73.6 |
| MS.gene063268.t1 | AT3G05260 | 29.469 | 207 | 134 | 6 | 4 | 202 | 40 | 242 | 1.68e-14 | 72.4 |
| MS.gene063268.t1 | AT3G26760 | 30.348 | 201 | 131 | 6 | 1 | 197 | 36 | 231 | 2.66e-14 | 72.0 |
| MS.gene063268.t1 | AT3G55310 | 26.341 | 205 | 143 | 5 | 1 | 198 | 17 | 220 | 7.32e-13 | 67.8 |
| MS.gene063268.t1 | AT1G63380 | 27.404 | 208 | 138 | 8 | 1 | 198 | 22 | 226 | 1.32e-12 | 67.0 |
| MS.gene063268.t1 | AT1G63380 | 27.404 | 208 | 138 | 8 | 1 | 198 | 15 | 219 | 1.49e-12 | 66.6 |
| MS.gene063268.t1 | AT1G63380 | 27.184 | 206 | 141 | 7 | 1 | 198 | 17 | 221 | 1.67e-12 | 66.6 |
| MS.gene063268.t1 | AT1G63380 | 27.184 | 206 | 141 | 7 | 1 | 198 | 19 | 223 | 1.82e-12 | 66.6 |
| MS.gene063268.t1 | AT1G62610 | 28.365 | 208 | 136 | 8 | 1 | 198 | 15 | 219 | 2.13e-12 | 66.2 |
| MS.gene063268.t1 | AT1G62610 | 28.365 | 208 | 136 | 8 | 1 | 198 | 19 | 223 | 2.21e-12 | 66.2 |
| MS.gene063268.t1 | AT1G62610 | 28.365 | 208 | 136 | 8 | 1 | 198 | 13 | 217 | 2.40e-12 | 66.2 |
| MS.gene063268.t1 | AT1G62610 | 28.365 | 208 | 136 | 8 | 1 | 198 | 14 | 218 | 2.47e-12 | 66.2 |
| MS.gene063268.t1 | AT3G12800 | 41.667 | 84 | 48 | 1 | 4 | 87 | 13 | 95 | 3.44e-12 | 65.9 |
| MS.gene063268.t1 | AT3G29250 | 28.251 | 223 | 152 | 5 | 1 | 220 | 44 | 261 | 3.58e-12 | 65.9 |
| MS.gene063268.t1 | AT3G29250 | 28.251 | 223 | 152 | 5 | 1 | 220 | 42 | 259 | 3.66e-12 | 65.9 |
| MS.gene063268.t1 | AT3G29250 | 28.713 | 202 | 136 | 5 | 1 | 199 | 6 | 202 | 5.75e-12 | 64.7 |
| MS.gene063268.t1 | AT2G30670 | 32.273 | 220 | 135 | 8 | 1 | 211 | 7 | 221 | 7.19e-12 | 64.7 |
| MS.gene063268.t1 | AT3G29260 | 28.358 | 201 | 135 | 5 | 1 | 198 | 6 | 200 | 2.92e-11 | 62.8 |
| MS.gene063268.t1 | AT1G10310 | 28.079 | 203 | 142 | 3 | 4 | 205 | 18 | 217 | 3.61e-11 | 62.4 |
| MS.gene063268.t1 | AT3G46170 | 26.087 | 207 | 141 | 6 | 1 | 198 | 26 | 229 | 5.18e-11 | 62.4 |
Find 66 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATATAGCTTACCATAAT+TGG | 0.149058 | 4.2:-7083206 | None:intergenic |
| GTAAATAATGCAGGAGTTTC+TGG | 0.163110 | 4.2:+7083137 | MS.gene063268:CDS |
| ATTCACAGGATACAAATTTC+TGG | 0.215325 | 4.2:+7084259 | MS.gene063268:intron |
| TGAATATCCTCTATCAAAAT+TGG | 0.229535 | 4.2:-7083164 | None:intergenic |
| AACTAAATACAATCCAATTA+TGG | 0.273832 | 4.2:+7083193 | MS.gene063268:CDS |
| TGGGCAGAACGACACATCTT+TGG | 0.310099 | 4.2:+7084936 | MS.gene063268:CDS |
| TCCCCTGATGTTACTATCAT+TGG | 0.348900 | 4.2:+7082934 | MS.gene063268:CDS |
| TCTTGTAGCAGTGGCTGATA+TGG | 0.366276 | 4.2:+7082897 | MS.gene063268:CDS |
| AACGACACATCTTTGGGCTT+TGG | 0.381249 | 4.2:+7084943 | MS.gene063268:CDS |
| TGTATGTGACAAACCCTTCA+TGG | 0.382578 | 4.2:+7084865 | MS.gene063268:CDS |
| GGGCAGAACGACACATCTTT+GGG | 0.386518 | 4.2:+7084937 | MS.gene063268:CDS |
| CAAAACAAATATGGCATTGA+AGG | 0.386732 | 4.2:+7084634 | MS.gene063268:CDS |
| GGTGCTTTATCCTGAGTTAG+TGG | 0.387203 | 4.2:+7084911 | MS.gene063268:CDS |
| ACTGGGGCAGCCTCAGGAAT+TGG | 0.397319 | 4.2:+7082237 | MS.gene063268:CDS |
| CAGGATCATAGTGGTTGCTT+CGG | 0.397364 | 4.2:+7084335 | MS.gene063268:CDS |
| CCGCTTACTGTCTTCAACCT+TGG | 0.411546 | 4.2:-7082968 | None:intergenic |
| AATTTCTGGGGAGCAGTTCA+TGG | 0.418408 | 4.2:+7084273 | MS.gene063268:CDS |
| TTCACAGGATACAAATTTCT+GGG | 0.420623 | 4.2:+7084260 | MS.gene063268:intron |
| GCAAAAGCCTTCTTGTAAGA+AGG | 0.427375 | 4.2:+7084965 | MS.gene063268:CDS |
| ATTGAACTTGGTTGGACCAT+TGG | 0.429928 | 4.2:+7084584 | MS.gene063268:CDS |
| TTATCCTGAGTTAGTGGACT+GGG | 0.457624 | 4.2:+7084917 | MS.gene063268:CDS |
| CTCTAAGAATTGAACTTGGT+TGG | 0.459501 | 4.2:+7084576 | MS.gene063268:CDS |
| AGAAAAGTAGTACTAATCAC+TGG | 0.460585 | 4.2:+7082219 | MS.gene063268:CDS |
| GATGAAACAATCAAACACTT+TGG | 0.473040 | 4.2:+7082997 | MS.gene063268:CDS |
| CTAATCACTGGGGCAGCCTC+AGG | 0.473197 | 4.2:+7082231 | MS.gene063268:CDS |
| AGGATCATAGTGGTTGCTTC+GGG | 0.474071 | 4.2:+7084336 | MS.gene063268:CDS |
| TCAGGATAAAGCACCTGAAA+AGG | 0.475371 | 4.2:-7084903 | None:intergenic |
| AACATCACTTTGAGCCATGA+AGG | 0.478716 | 4.2:-7084879 | None:intergenic |
| ATAGTGGTTGCTTCGGGTTG+TGG | 0.481789 | 4.2:+7084342 | MS.gene063268:CDS |
| TAGAGACTTAATCTTGGAAG+TGG | 0.486255 | 4.2:-7084372 | None:intergenic |
| ACATTATAGAGACTTAATCT+TGG | 0.493027 | 4.2:-7084378 | None:intergenic |
| ATTATGGTATCAGGCTAGTA+AGG | 0.497359 | 4.2:+7084529 | MS.gene063268:intron |
| GCACCAATGATAGTAACATC+AGG | 0.503443 | 4.2:-7082937 | None:intergenic |
| GTTTCATGCAGTGGATCATC+TGG | 0.506526 | 4.2:+7083115 | MS.gene063268:intron |
| CATTCATTTGCTGATCCCAA+TGG | 0.513399 | 4.2:-7084804 | None:intergenic |
| GGCATTACAATCGTCACACC+TGG | 0.515479 | 4.2:+7084605 | MS.gene063268:CDS |
| CATTGGTGCAGATGTTTCCA+AGG | 0.517111 | 4.2:+7082951 | MS.gene063268:CDS |
| GATCATCTGGTAAATAATGC+AGG | 0.522085 | 4.2:+7083128 | MS.gene063268:CDS |
| TAGTCTGCAATGCATTCCAT+TGG | 0.525080 | 4.2:+7084788 | MS.gene063268:CDS |
| GCTGATATGGCAACATCCCT+TGG | 0.533765 | 4.2:+7082910 | MS.gene063268:CDS |
| CAAAAGCCTTCTTGTAAGAA+GGG | 0.535473 | 4.2:+7084966 | MS.gene063268:CDS |
| TTTATCCTGAGTTAGTGGAC+TGG | 0.536192 | 4.2:+7084916 | MS.gene063268:CDS |
| AGTCTGCAATGCATTCCATT+GGG | 0.547551 | 4.2:+7084789 | MS.gene063268:CDS |
| GAGACTCTAAGAATTGAACT+TGG | 0.549331 | 4.2:+7084572 | MS.gene063268:CDS |
| TGGTTGCTTCGGGTTGTGGA+TGG | 0.554870 | 4.2:+7084346 | MS.gene063268:CDS |
| AGATCGCCCTTCTTACAAGA+AGG | 0.555115 | 4.2:-7084972 | None:intergenic |
| GAAAAGTAGTACTAATCACT+GGG | 0.580421 | 4.2:+7082220 | MS.gene063268:CDS |
| CACCAATGATAGTAACATCA+GGG | 0.594536 | 4.2:-7082936 | None:intergenic |
| ACATCACTTTGAGCCATGAA+GGG | 0.597072 | 4.2:-7084878 | None:intergenic |
| CCAAGGTTGAAGACAGTAAG+CGG | 0.605037 | 4.2:+7082968 | MS.gene063268:CDS |
| TCTGCCCAGTCCACTAACTC+AGG | 0.607396 | 4.2:-7084921 | None:intergenic |
| AGAGACTTAATCTTGGAAGT+GGG | 0.610882 | 4.2:-7084371 | None:intergenic |
| AGTAACATCAGGGGAACCAA+GGG | 0.611098 | 4.2:-7082926 | None:intergenic |
| AAAAGAGAATCTTGTAGCAG+TGG | 0.617226 | 4.2:+7082888 | MS.gene063268:CDS |
| ATTATTCTGTCTTAAGCACG+TGG | 0.620818 | 4.2:-7085013 | None:intergenic |
| GCTTATGAGTATGCTAAGAG+AGG | 0.621046 | 4.2:+7082838 | MS.gene063268:CDS |
| TAGTAACATCAGGGGAACCA+AGG | 0.622054 | 4.2:-7082927 | None:intergenic |
| CAGCAAAGGCAGGATCATAG+TGG | 0.623837 | 4.2:+7084326 | MS.gene063268:CDS |
| TCACAGGATACAAATTTCTG+GGG | 0.631294 | 4.2:+7084261 | MS.gene063268:intron |
| GAGTACCTCGCCAATTCCTG+AGG | 0.653628 | 4.2:-7082247 | None:intergenic |
| GGCAGCCTCAGGAATTGGCG+AGG | 0.661286 | 4.2:+7082242 | MS.gene063268:CDS |
| TGTGACGATTGTAATGCCAA+TGG | 0.709012 | 4.2:-7084600 | None:intergenic |
| ATTGAAGGCATATGAAGACG+AGG | 0.713291 | 4.2:+7084649 | MS.gene063268:CDS |
| ACCAATGATAGTAACATCAG+GGG | 0.719017 | 4.2:-7082935 | None:intergenic |
| AGTATGCTAAGAGAGGAGCA+AGG | 0.743793 | 4.2:+7082845 | MS.gene063268:CDS |
| AAAAGTAGTACTAATCACTG+GGG | 0.769611 | 4.2:+7082221 | MS.gene063268:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATGAAAAAAAGATTT+AGG | - | chr4.2:7082671-7082690 | None:intergenic | 10.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | - | chr4.2:7083377-7083396 | None:intergenic | 15.0% |
| !! | ATAATGTTTAAAAATAAGTG+AGG | - | chr4.2:7082486-7082505 | None:intergenic | 15.0% |
| !! | ATATATACCTATATCTAAAT+GGG | - | chr4.2:7083908-7083927 | None:intergenic | 15.0% |
| !! | CTAAATGAAGAATAAAATAA+AGG | - | chr4.2:7083654-7083673 | None:intergenic | 15.0% |
| !! | TATATATACCTATATCTAAA+TGG | - | chr4.2:7083909-7083928 | None:intergenic | 15.0% |
| !! | TTTCTTTAGTAAAAAAAAGA+AGG | - | chr4.2:7083713-7083732 | None:intergenic | 15.0% |
| !!! | AAATTAAACTGATTTTTTGA+AGG | + | chr4.2:7083827-7083846 | MS.gene063268:intron | 15.0% |
| !!! | AATGGGATTTTTTTTTTTTT+AGG | - | chr4.2:7083891-7083910 | None:intergenic | 15.0% |
| !!! | ATGGGATTTTTTTTTTTTTA+GGG | - | chr4.2:7083890-7083909 | None:intergenic | 15.0% |
| !!! | CACTTATTTTTAAACATTAT+TGG | + | chr4.2:7082486-7082505 | MS.gene063268:intron | 15.0% |
| !!! | TCTTTTTTTTACTAAAGAAA+AGG | + | chr4.2:7083713-7083732 | MS.gene063268:intron | 15.0% |
| !! | AAAAAATCCCATTTAGATAT+AGG | + | chr4.2:7083898-7083917 | MS.gene063268:intron | 20.0% |
| !! | AACTAAATACAATCCAATTA+TGG | + | chr4.2:7083193-7083212 | MS.gene063268:CDS | 20.0% |
| !! | ACTATACCAAATAAAACTTT+AGG | + | chr4.2:7082756-7082775 | MS.gene063268:intron | 20.0% |
| !! | CAATTTCTTGATAAAATCTA+AGG | - | chr4.2:7083378-7083397 | None:intergenic | 20.0% |
| !! | CTATACCAAATAAAACTTTA+GGG | + | chr4.2:7082757-7082776 | MS.gene063268:intron | 20.0% |
| !! | TAGTTATATACTATGATACA+AGG | + | chr4.2:7084077-7084096 | MS.gene063268:intron | 20.0% |
| !! | TATACCAAATAAAACTTTAG+GGG | + | chr4.2:7082758-7082777 | MS.gene063268:intron | 20.0% |
| !! | TATTTAACAAAACCTATGAT+CGG | + | chr4.2:7084011-7084030 | MS.gene063268:intron | 20.0% |
| !! | TCACCAAAATAGATTATTAA+TGG | - | chr4.2:7082281-7082300 | None:intergenic | 20.0% |
| !!! | ACAGTTTAAGACTATTATTT+TGG | - | chr4.2:7084499-7084518 | None:intergenic | 20.0% |
| !!! | ACTCCATTAATAATCTATTT+TGG | + | chr4.2:7082275-7082294 | MS.gene063268:intron | 20.0% |
| !!! | ATAAAACCTTTCTCTAAAAA+AGG | + | chr4.2:7082810-7082829 | MS.gene063268:intron | 20.0% |
| !!! | ATATTTGTTTTGATAAAACC+AGG | - | chr4.2:7084626-7084645 | None:intergenic | 20.0% |
| !!! | ATCATTGCTCTTTTTTTAAA+TGG | - | chr4.2:7083263-7083282 | None:intergenic | 20.0% |
| !!! | TGGTTTTATCAAAACAAATA+TGG | + | chr4.2:7084625-7084644 | MS.gene063268:CDS | 20.0% |
| ! | AACATATAGCTTACCATAAT+TGG | - | chr4.2:7083209-7083228 | None:intergenic | 25.0% |
| ! | AACTGTGATTATATGCATTA+TGG | + | chr4.2:7084513-7084532 | MS.gene063268:intron | 25.0% |
| ! | AATCTCATTGCTTAAAAATC+AGG | + | chr4.2:7082563-7082582 | MS.gene063268:intron | 25.0% |
| ! | AATTGAACTACATCAAAAGT+CGG | + | chr4.2:7084182-7084201 | MS.gene063268:intron | 25.0% |
| ! | ACATTATAGAGACTTAATCT+TGG | - | chr4.2:7084381-7084400 | None:intergenic | 25.0% |
| ! | ATAAAATCATGAATGACCAA+GGG | - | chr4.2:7084127-7084146 | None:intergenic | 25.0% |
| ! | ATATGTTCTGCTTCAATTAA+TGG | + | chr4.2:7083222-7083241 | MS.gene063268:intron | 25.0% |
| ! | ATTATATGCATTATGGTATC+AGG | + | chr4.2:7084520-7084539 | MS.gene063268:intron | 25.0% |
| ! | CTTAATAACTATCTCAAAAG+TGG | + | chr4.2:7084216-7084235 | MS.gene063268:intron | 25.0% |
| ! | TAGCTACCTAAACTTTAATT+TGG | - | chr4.2:7083955-7083974 | None:intergenic | 25.0% |
| ! | TATAAAATCATGAATGACCA+AGG | - | chr4.2:7084128-7084147 | None:intergenic | 25.0% |
| ! | TGAATATCCTCTATCAAAAT+TGG | - | chr4.2:7083167-7083186 | None:intergenic | 25.0% |
| ! | TTAAAGTTTAGGTAGCTATT+AGG | + | chr4.2:7083957-7083976 | MS.gene063268:intron | 25.0% |
| ! | TTCACAACATTAACTATTGT+AGG | + | chr4.2:7084764-7084783 | MS.gene063268:intron | 25.0% |
| ! | TTGGTTGAGGTTTAAATTAA+AGG | - | chr4.2:7084709-7084728 | None:intergenic | 25.0% |
| !! | TAATATCTAAAATCCCAATG+CGG | + | chr4.2:7083927-7083946 | MS.gene063268:intron | 25.0% |
| !! | TATTGGCTAACATTAATTTC+AGG | - | chr4.2:7083402-7083421 | None:intergenic | 25.0% |
| !!! | ATTGCACTCTGTTTTTTTTA+AGG | - | chr4.2:7083560-7083579 | None:intergenic | 25.0% |
| !!! | GTTTTATTAGCAACATTAAC+TGG | - | chr4.2:7082797-7082816 | None:intergenic | 25.0% |
| AAAAGTAGTACTAATCACTG+GGG | + | chr4.2:7082221-7082240 | MS.gene063268:CDS | 30.0% | |
| AACTTCTTATCAACTGAACA+AGG | - | chr4.2:7082517-7082536 | None:intergenic | 30.0% | |
| AGAAAAGTAGTACTAATCAC+TGG | + | chr4.2:7082219-7082238 | MS.gene063268:CDS | 30.0% | |
| AGAAAGATTCAAGAATGACA+TGG | + | chr4.2:7083340-7083359 | MS.gene063268:intron | 30.0% | |
| AGAAAGATTCAAGAATGACA+TGG | - | chr4.2:7083359-7083340 | None:intergenic | 30.0% | |
| ATCTCCATCAATTCTCTATA+CGG | + | chr4.2:7082599-7082618 | MS.gene063268:intron | 30.0% | |
| ATTCACAGGATACAAATTTC+TGG | + | chr4.2:7084259-7084278 | MS.gene063268:intron | 30.0% | |
| CTGCTTAGATATTAACTTCA+TGG | + | chr4.2:7084153-7084172 | MS.gene063268:intron | 30.0% | |
| GAAAAGTAGTACTAATCACT+GGG | + | chr4.2:7082220-7082239 | MS.gene063268:CDS | 30.0% | |
| GATGAAACAATCAAACACTT+TGG | + | chr4.2:7082997-7083016 | MS.gene063268:CDS | 30.0% | |
| GTTGAGGTTTAAATTAAAGG+AGG | - | chr4.2:7084706-7084725 | None:intergenic | 30.0% | |
| TAAAAATCAGTCGCAATAGT+TGG | + | chr4.2:7082382-7082401 | MS.gene063268:intron | 30.0% | |
| TTCACAGGATACAAATTTCT+GGG | + | chr4.2:7084260-7084279 | MS.gene063268:intron | 30.0% | |
| ! | CAAAACAAATATGGCATTGA+AGG | + | chr4.2:7084634-7084653 | MS.gene063268:CDS | 30.0% |
| ! | CACTTTTAGTGTTTATTCAC+AGG | + | chr4.2:7084245-7084264 | MS.gene063268:intron | 30.0% |
| ! | TATATCCACATTTTTCTCGT+AGG | - | chr4.2:7082315-7082334 | None:intergenic | 30.0% |
| ! | TCGGTTGGAAAACATTTTTA+AGG | + | chr4.2:7084030-7084049 | MS.gene063268:intron | 30.0% |
| !!! | ATGTCCCCTAAAGTTTTATT+TGG | - | chr4.2:7082765-7082784 | None:intergenic | 30.0% |
| !!! | CTAGTTCCTTTTTTAGAGAA+AGG | - | chr4.2:7082819-7082838 | None:intergenic | 30.0% |
| AAAAGAGAATCTTGTAGCAG+TGG | + | chr4.2:7082888-7082907 | MS.gene063268:CDS | 35.0% | |
| AAATTGTGTGTTTCATGCAG+TGG | + | chr4.2:7083106-7083125 | MS.gene063268:intron | 35.0% | |
| AAGTTAGCAAGCTCATCTTT+GGG | + | chr4.2:7083987-7084006 | MS.gene063268:intron | 35.0% | |
| ACCAATGATAGTAACATCAG+GGG | - | chr4.2:7082938-7082957 | None:intergenic | 35.0% | |
| AGAGACTTAATCTTGGAAGT+GGG | - | chr4.2:7084374-7084393 | None:intergenic | 35.0% | |
| ATTATGGTATCAGGCTAGTA+AGG | + | chr4.2:7084529-7084548 | MS.gene063268:intron | 35.0% | |
| CAAAAGCCTTCTTGTAAGAA+GGG | + | chr4.2:7084966-7084985 | MS.gene063268:CDS | 35.0% | |
| CAAACCGTATAGAGAATTGA+TGG | - | chr4.2:7082606-7082625 | None:intergenic | 35.0% | |
| CAATAAAATCTCAGCATGAC+CGG | + | chr4.2:7083417-7083436 | MS.gene063268:intron | 35.0% | |
| CACCAATGATAGTAACATCA+GGG | - | chr4.2:7082939-7082958 | None:intergenic | 35.0% | |
| GATCATCTGGTAAATAATGC+AGG | + | chr4.2:7083128-7083147 | MS.gene063268:CDS | 35.0% | |
| GCATCATATGCACACAAAAA+AGG | + | chr4.2:7082434-7082453 | MS.gene063268:intron | 35.0% | |
| GTAAATAATGCAGGAGTTTC+TGG | + | chr4.2:7083137-7083156 | MS.gene063268:CDS | 35.0% | |
| TAACAAAACCTATGATCGGT+TGG | + | chr4.2:7084015-7084034 | MS.gene063268:intron | 35.0% | |
| TAGAGACTTAATCTTGGAAG+TGG | - | chr4.2:7084375-7084394 | None:intergenic | 35.0% | |
| TCACAGGATACAAATTTCTG+GGG | + | chr4.2:7084261-7084280 | MS.gene063268:intron | 35.0% | |
| TCATACCTACGAGAAAAATG+TGG | + | chr4.2:7082307-7082326 | MS.gene063268:intron | 35.0% | |
| TCTTATCAACTGAACAAGGT+CGG | - | chr4.2:7082513-7082532 | None:intergenic | 35.0% | |
| ! | AATACGTAGCATTTTTCCCT+TGG | + | chr4.2:7084108-7084127 | MS.gene063268:intron | 35.0% |
| ! | AATGTTTTCCAACCGATCAT+AGG | - | chr4.2:7084026-7084045 | None:intergenic | 35.0% |
| ! | AGGAGGTGTAATATTATGCT+TGG | - | chr4.2:7084689-7084708 | None:intergenic | 35.0% |
| ! | CAAAGTGATGTTTCCTTTTC+AGG | + | chr4.2:7084890-7084909 | MS.gene063268:CDS | 35.0% |
| ! | CTCTAAGAATTGAACTTGGT+TGG | + | chr4.2:7084576-7084595 | MS.gene063268:CDS | 35.0% |
| ! | GAGACTCTAAGAATTGAACT+TGG | + | chr4.2:7084572-7084591 | MS.gene063268:CDS | 35.0% |
| ! | TACCATACACATTCTAGAGA+TGG | + | chr4.2:7083586-7083605 | MS.gene063268:intron | 35.0% |
| ! | TCTGCTTCAATTAATGGACA+TGG | + | chr4.2:7083228-7083247 | MS.gene063268:intron | 35.0% |
| !! | AACCATCTCTAGAATGTGTA+TGG | - | chr4.2:7083591-7083610 | None:intergenic | 35.0% |
| !! | CGCACTTTTTACTATGTCTT+TGG | - | chr4.2:7084832-7084851 | None:intergenic | 35.0% |
| !! | TGGCATTCCAATTTTGATAG+AGG | + | chr4.2:7083157-7083176 | MS.gene063268:CDS | 35.0% |
| !!! | CTTTGCTGTTTTTGAGATGT+GGG | - | chr4.2:7084314-7084333 | None:intergenic | 35.0% |
| AACATCACTTTGAGCCATGA+AGG | - | chr4.2:7084882-7084901 | None:intergenic | 40.0% | |
| ACATCACTTTGAGCCATGAA+GGG | - | chr4.2:7084881-7084900 | None:intergenic | 40.0% | |
| AGTCTGCAATGCATTCCATT+GGG | + | chr4.2:7084789-7084808 | MS.gene063268:CDS | 40.0% | |
| ATCTCAAAAACAGCAAAGGC+AGG | + | chr4.2:7084316-7084335 | MS.gene063268:CDS | 40.0% | |
| ATTGAACTTGGTTGGACCAT+TGG | + | chr4.2:7084584-7084603 | MS.gene063268:CDS | 40.0% | |
| CAAGTTAGCAAGCTCATCTT+TGG | + | chr4.2:7083986-7084005 | MS.gene063268:intron | 40.0% | |
| CACAGTAGTGTAAACTGCAT+TGG | - | chr4.2:7084728-7084747 | None:intergenic | 40.0% | |
| CCACATCTCAAAAACAGCAA+AGG | + | chr4.2:7084312-7084331 | MS.gene063268:CDS | 40.0% | |
| GCAAAAGCCTTCTTGTAAGA+AGG | + | chr4.2:7084965-7084984 | MS.gene063268:CDS | 40.0% | |
| GCACCAATGATAGTAACATC+AGG | - | chr4.2:7082940-7082959 | None:intergenic | 40.0% | |
| GCATATGATGCCTTACCTTT+GGG | - | chr4.2:7082425-7082444 | None:intergenic | 40.0% | |
| GCGGAGCCAAATTAAAGTTT+AGG | + | chr4.2:7083946-7083965 | MS.gene063268:intron | 40.0% | |
| GCTTATGAGTATGCTAAGAG+AGG | + | chr4.2:7082838-7082857 | MS.gene063268:CDS | 40.0% | |
| TAGTCTGCAATGCATTCCAT+TGG | + | chr4.2:7084788-7084807 | MS.gene063268:CDS | 40.0% | |
| TCCCCTGATGTTACTATCAT+TGG | + | chr4.2:7082934-7082953 | MS.gene063268:CDS | 40.0% | |
| TGCATATGATGCCTTACCTT+TGG | - | chr4.2:7082426-7082445 | None:intergenic | 40.0% | |
| TGTATGTGACAAACCCTTCA+TGG | + | chr4.2:7084865-7084884 | MS.gene063268:CDS | 40.0% | |
| TGTGACGATTGTAATGCCAA+TGG | - | chr4.2:7084603-7084622 | None:intergenic | 40.0% | |
| ! | ACATAGTAAAAAGTGCGTGC+AGG | + | chr4.2:7084835-7084854 | MS.gene063268:CDS | 40.0% |
| ! | ATAGTAAAAAGTGCGTGCAG+GGG | + | chr4.2:7084837-7084856 | MS.gene063268:CDS | 40.0% |
| ! | ATTGAAGGCATATGAAGACG+AGG | + | chr4.2:7084649-7084668 | MS.gene063268:CDS | 40.0% |
| ! | CATAGTAAAAAGTGCGTGCA+GGG | + | chr4.2:7084836-7084855 | MS.gene063268:CDS | 40.0% |
| ! | CATTCATTTGCTGATCCCAA+TGG | - | chr4.2:7084807-7084826 | None:intergenic | 40.0% |
| ! | CGGTCATGCTGAGATTTTAT+TGG | - | chr4.2:7083419-7083438 | None:intergenic | 40.0% |
| ! | TCAGGATAAAGCACCTGAAA+AGG | - | chr4.2:7084906-7084925 | None:intergenic | 40.0% |
| ! | TTTATCCTGAGTTAGTGGAC+TGG | + | chr4.2:7084916-7084935 | MS.gene063268:CDS | 40.0% |
| !! | ACTTTAATTTGGCTCCGCAT+TGG | - | chr4.2:7083944-7083963 | None:intergenic | 40.0% |
| !! | AGTGTAAACTGCATTGGTTG+AGG | - | chr4.2:7084722-7084741 | None:intergenic | 40.0% |
| !! | CTTTAATTTGGCTCCGCATT+GGG | - | chr4.2:7083943-7083962 | None:intergenic | 40.0% |
| !! | TTATCCTGAGTTAGTGGACT+GGG | + | chr4.2:7084917-7084936 | MS.gene063268:CDS | 40.0% |
| !!! | CCTTTGCTGTTTTTGAGATG+TGG | - | chr4.2:7084315-7084334 | None:intergenic | 40.0% |
| AACGACACATCTTTGGGCTT+TGG | + | chr4.2:7084943-7084962 | MS.gene063268:CDS | 45.0% | |
| AAGGCATATGAAGACGAGGT+CGG | + | chr4.2:7084653-7084672 | MS.gene063268:intron | 45.0% | |
| AGATCGCCCTTCTTACAAGA+AGG | - | chr4.2:7084975-7084994 | None:intergenic | 45.0% | |
| AGGATCATAGTGGTTGCTTC+GGG | + | chr4.2:7084336-7084355 | MS.gene063268:CDS | 45.0% | |
| AGTAACATCAGGGGAACCAA+GGG | - | chr4.2:7082929-7082948 | None:intergenic | 45.0% | |
| AGTATGCTAAGAGAGGAGCA+AGG | + | chr4.2:7082845-7082864 | MS.gene063268:CDS | 45.0% | |
| ATGATGCCTTACCTTTGGGT+CGG | - | chr4.2:7082421-7082440 | None:intergenic | 45.0% | |
| CAGGATCATAGTGGTTGCTT+CGG | + | chr4.2:7084335-7084354 | MS.gene063268:CDS | 45.0% | |
| CATTGGTGCAGATGTTTCCA+AGG | + | chr4.2:7082951-7082970 | MS.gene063268:CDS | 45.0% | |
| CCAAGGTTGAAGACAGTAAG+CGG | + | chr4.2:7082968-7082987 | MS.gene063268:CDS | 45.0% | |
| GGTGCTTTATCCTGAGTTAG+TGG | + | chr4.2:7084911-7084930 | MS.gene063268:CDS | 45.0% | |
| GTTTCATGCAGTGGATCATC+TGG | + | chr4.2:7083115-7083134 | MS.gene063268:intron | 45.0% | |
| TAGTAACATCAGGGGAACCA+AGG | - | chr4.2:7082930-7082949 | None:intergenic | 45.0% | |
| TCAGCATGACCGGAAATCAT+GGG | + | chr4.2:7083427-7083446 | MS.gene063268:intron | 45.0% | |
| TCTTGTAGCAGTGGCTGATA+TGG | + | chr4.2:7082897-7082916 | MS.gene063268:CDS | 45.0% | |
| TGGACGATGTATGTGACTGT+TGG | + | chr4.2:7083017-7083036 | MS.gene063268:intron | 45.0% | |
| ! | AATTTCTGGGGAGCAGTTCA+TGG | + | chr4.2:7084273-7084292 | MS.gene063268:CDS | 45.0% |
| ! | CAATAGTTGGTTCCGTTGCA+GGG | + | chr4.2:7082395-7082414 | MS.gene063268:intron | 45.0% |
| CAGCAAAGGCAGGATCATAG+TGG | + | chr4.2:7084326-7084345 | MS.gene063268:CDS | 50.0% | |
| CAGCATGACCGGAAATCATG+GGG | + | chr4.2:7083428-7083447 | MS.gene063268:intron | 50.0% | |
| CCGCTTACTGTCTTCAACCT+TGG | - | chr4.2:7082971-7082990 | None:intergenic | 50.0% | |
| CTCAGCATGACCGGAAATCA+TGG | + | chr4.2:7083426-7083445 | MS.gene063268:intron | 50.0% | |
| GCTGATATGGCAACATCCCT+TGG | + | chr4.2:7082910-7082929 | MS.gene063268:CDS | 50.0% | |
| GGCATTACAATCGTCACACC+TGG | + | chr4.2:7084605-7084624 | MS.gene063268:CDS | 50.0% | |
| GGGCAGAACGACACATCTTT+GGG | + | chr4.2:7084937-7084956 | MS.gene063268:CDS | 50.0% | |
| TGAAGACGAGGTCGGTCAAT+TGG | + | chr4.2:7084661-7084680 | MS.gene063268:intron | 50.0% | |
| TGGGCAGAACGACACATCTT+TGG | + | chr4.2:7084936-7084955 | MS.gene063268:CDS | 50.0% | |
| ! | GCAATAGTTGGTTCCGTTGC+AGG | + | chr4.2:7082394-7082413 | MS.gene063268:intron | 50.0% |
| ! | GTGGCGGGACTGAAATCTAA+GGG | + | chr4.2:7083469-7083488 | MS.gene063268:intron | 50.0% |
| !! | ATAGTGGTTGCTTCGGGTTG+TGG | + | chr4.2:7084342-7084361 | MS.gene063268:CDS | 50.0% |
| ATGGGGTGGTGCGGAAATCA+TGG | + | chr4.2:7083445-7083464 | MS.gene063268:intron | 55.0% | |
| CATGACCGGAAATCATGGGG+TGG | + | chr4.2:7083431-7083450 | MS.gene063268:intron | 55.0% | |
| GAGTACCTCGCCAATTCCTG+AGG | - | chr4.2:7082250-7082269 | None:intergenic | 55.0% | |
| TCTGCCCAGTCCACTAACTC+AGG | - | chr4.2:7084924-7084943 | None:intergenic | 55.0% | |
| TGGGGTGGTGCGGAAATCAT+GGG | + | chr4.2:7083446-7083465 | MS.gene063268:intron | 55.0% | |
| !! | GGTGGCGGGACTGAAATCTA+AGG | + | chr4.2:7083468-7083487 | MS.gene063268:intron | 55.0% |
| !! | TGGTTGCTTCGGGTTGTGGA+TGG | + | chr4.2:7084346-7084365 | MS.gene063268:CDS | 55.0% |
| ACTGGGGCAGCCTCAGGAAT+TGG | + | chr4.2:7082237-7082256 | MS.gene063268:CDS | 60.0% | |
| CCGCACCACCCCATGATTTC+CGG | - | chr4.2:7083439-7083458 | None:intergenic | 60.0% | |
| CCGGAAATCATGGGGTGGTG+CGG | + | chr4.2:7083436-7083455 | MS.gene063268:intron | 60.0% | |
| CTAATCACTGGGGCAGCCTC+AGG | + | chr4.2:7082231-7082250 | MS.gene063268:CDS | 60.0% | |
| GGGGTGGTGCGGAAATCATG+GGG | + | chr4.2:7083447-7083466 | MS.gene063268:intron | 60.0% | |
| GTGCGGAAATCATGGGGTGG+CGG | + | chr4.2:7083453-7083472 | MS.gene063268:intron | 60.0% | |
| GTGGTGCGGAAATCATGGGG+TGG | + | chr4.2:7083450-7083469 | MS.gene063268:intron | 60.0% | |
| TGCGGAAATCATGGGGTGGC+GGG | + | chr4.2:7083454-7083473 | MS.gene063268:intron | 60.0% | |
| CCTTTGGGTCGGCCCTGCAA+CGG | - | chr4.2:7082410-7082429 | None:intergenic | 65.0% | |
| GCAGGGCCGACCCAAAGGTA+AGG | + | chr4.2:7082412-7082431 | MS.gene063268:intron | 65.0% | |
| GGCAGCCTCAGGAATTGGCG+AGG | + | chr4.2:7082242-7082261 | MS.gene063268:CDS | 65.0% | |
| CCGTTGCAGGGCCGACCCAA+AGG | + | chr4.2:7082407-7082426 | MS.gene063268:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 7082213 | 7085034 | 7082213 | ID=MS.gene063268 |
| chr4.2 | mRNA | 7082213 | 7085034 | 7082213 | ID=MS.gene063268.t1;Parent=MS.gene063268 |
| chr4.2 | exon | 7082213 | 7082263 | 7082213 | ID=MS.gene063268.t1.exon1;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7082213 | 7082263 | 7082213 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| chr4.2 | exon | 7082832 | 7083024 | 7082832 | ID=MS.gene063268.t1.exon2;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7082832 | 7083024 | 7082832 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| chr4.2 | exon | 7083126 | 7083214 | 7083126 | ID=MS.gene063268.t1.exon3;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7083126 | 7083214 | 7083126 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| chr4.2 | exon | 7084267 | 7084398 | 7084267 | ID=MS.gene063268.t1.exon4;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7084267 | 7084398 | 7084267 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| chr4.2 | exon | 7084542 | 7084670 | 7084542 | ID=MS.gene063268.t1.exon5;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7084542 | 7084670 | 7084542 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| chr4.2 | exon | 7084786 | 7085034 | 7084786 | ID=MS.gene063268.t1.exon6;Parent=MS.gene063268.t1 |
| chr4.2 | CDS | 7084786 | 7085034 | 7084786 | ID=cds.MS.gene063268.t1;Parent=MS.gene063268.t1 |
| Gene Sequence |
| Protein sequence |
