Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064918.t1 | XP_003598266.2 | 95.6 | 321 | 14 | 0 | 1 | 321 | 17 | 337 | 5.60E-169 | 603.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064918.t1 | Q8N5I4 | 32.5 | 280 | 162 | 10 | 61 | 333 | 38 | 297 | 1.0e-25 | 119.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064918.t1 | G7J0B2 | 95.6 | 321 | 14 | 0 | 1 | 321 | 17 | 337 | 4.0e-169 | 603.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064918 | MS.gene20199 | PPI |
| MS.gene064918 | MS.gene037994 | PPI |
| MS.gene064918 | MS.gene49118 | PPI |
| MS.gene064918 | MS.gene34140 | PPI |
| MS.gene064918 | MS.gene57782 | PPI |
| MS.gene064918 | MS.gene058995 | PPI |
| MS.gene064918 | MS.gene006262 | PPI |
| MS.gene064918 | MS.gene035607 | PPI |
| MS.gene064918 | MS.gene061154 | PPI |
| MS.gene064918 | MS.gene34137 | PPI |
| MS.gene064918 | MS.gene012538 | PPI |
| MS.gene064918 | MS.gene49121 | PPI |
| MS.gene064918 | MS.gene49120 | PPI |
| MS.gene064918 | MS.gene34138 | PPI |
| MS.gene064918 | MS.gene061893 | PPI |
| MS.gene064918 | MS.gene34141 | PPI |
| MS.gene064918 | MS.gene06120 | PPI |
| MS.gene064918 | MS.gene42492 | PPI |
| MS.gene048973 | MS.gene064918 | PPI |
| MS.gene064918 | MS.gene49117 | PPI |
| MS.gene064918 | MS.gene061158 | PPI |
| MS.gene006263 | MS.gene064918 | PPI |
| MS.gene064918 | MS.gene006264 | PPI |
| MS.gene064918 | MS.gene061157 | PPI |
| MS.gene064918 | MS.gene95938 | PPI |
| MS.gene064918 | MS.gene55839 | PPI |
| MS.gene05158 | MS.gene064918 | PPI |
| MS.gene064918 | MS.gene24053 | PPI |
| MS.gene061155 | MS.gene064918 | PPI |
| MS.gene064918 | MS.gene006265 | PPI |
| MS.gene064918 | MS.gene40431 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064918.t1 | MTR_3g009190 | 95.639 | 321 | 14 | 0 | 1 | 321 | 17 | 337 | 0.0 | 620 |
| MS.gene064918.t1 | MTR_3g009190 | 96.226 | 318 | 12 | 0 | 4 | 321 | 2 | 319 | 0.0 | 618 |
| MS.gene064918.t1 | MTR_6g453040 | 94.613 | 297 | 16 | 0 | 25 | 321 | 1 | 297 | 0.0 | 572 |
| MS.gene064918.t1 | MTR_3g091070 | 89.226 | 297 | 14 | 1 | 25 | 321 | 1 | 279 | 0.0 | 535 |
| MS.gene064918.t1 | MTR_6g453040 | 90.141 | 284 | 24 | 1 | 4 | 287 | 2 | 281 | 0.0 | 510 |
| MS.gene064918.t1 | MTR_3g009190 | 94.141 | 256 | 15 | 0 | 66 | 321 | 63 | 318 | 1.24e-171 | 481 |
| MS.gene064918.t1 | MTR_6g453040 | 94.191 | 241 | 14 | 0 | 4 | 244 | 2 | 242 | 1.08e-164 | 459 |
| MS.gene064918.t1 | MTR_3g009200 | 79.006 | 181 | 26 | 3 | 104 | 281 | 2 | 173 | 9.23e-96 | 282 |
| MS.gene064918.t1 | MTR_6g453030 | 88.312 | 77 | 9 | 0 | 94 | 170 | 1 | 77 | 2.04e-42 | 142 |
| MS.gene064918.t1 | MTR_3g077410 | 31.343 | 268 | 165 | 8 | 59 | 322 | 32 | 284 | 4.04e-26 | 106 |
| MS.gene064918.t1 | MTR_8g099995 | 31.933 | 238 | 147 | 5 | 67 | 300 | 38 | 264 | 8.16e-26 | 105 |
| MS.gene064918.t1 | MTR_4g105310 | 29.630 | 243 | 154 | 5 | 62 | 300 | 46 | 275 | 5.25e-24 | 100 |
| MS.gene064918.t1 | MTR_4g105310 | 30.837 | 227 | 140 | 6 | 61 | 283 | 45 | 258 | 2.31e-23 | 97.8 |
| MS.gene064918.t1 | MTR_7g099850 | 30.769 | 221 | 137 | 5 | 67 | 283 | 37 | 245 | 1.41e-21 | 94.0 |
| MS.gene064918.t1 | MTR_8g098415 | 32.129 | 249 | 149 | 6 | 67 | 308 | 32 | 267 | 7.52e-21 | 91.7 |
| MS.gene064918.t1 | MTR_8g098415 | 31.727 | 249 | 150 | 6 | 67 | 308 | 32 | 267 | 8.43e-21 | 91.7 |
| MS.gene064918.t1 | MTR_1g068970 | 29.614 | 233 | 147 | 6 | 67 | 295 | 37 | 256 | 9.31e-20 | 88.6 |
| MS.gene064918.t1 | MTR_6g041980 | 27.160 | 243 | 158 | 8 | 15 | 247 | 14 | 247 | 7.94e-19 | 85.1 |
| MS.gene064918.t1 | MTR_1g100305 | 30.588 | 255 | 145 | 9 | 67 | 308 | 32 | 267 | 9.39e-19 | 85.9 |
| MS.gene064918.t1 | MTR_1g100395 | 28.916 | 249 | 157 | 6 | 67 | 308 | 32 | 267 | 3.33e-18 | 84.3 |
| MS.gene064918.t1 | MTR_6g041980 | 29.648 | 199 | 125 | 6 | 15 | 207 | 14 | 203 | 6.22e-18 | 84.0 |
| MS.gene064918.t1 | MTR_1g100335 | 30.493 | 223 | 138 | 5 | 67 | 285 | 32 | 241 | 2.78e-17 | 80.9 |
| MS.gene064918.t1 | MTR_1g100335 | 30.493 | 223 | 138 | 5 | 67 | 285 | 32 | 241 | 3.67e-17 | 80.5 |
| MS.gene064918.t1 | MTR_1g100335 | 28.514 | 249 | 158 | 6 | 67 | 308 | 32 | 267 | 5.76e-17 | 80.5 |
| MS.gene064918.t1 | MTR_1g100315 | 29.778 | 225 | 141 | 5 | 67 | 287 | 32 | 243 | 5.82e-17 | 80.5 |
| MS.gene064918.t1 | MTR_6g053550 | 30.802 | 237 | 130 | 9 | 66 | 289 | 39 | 254 | 1.39e-16 | 79.7 |
| MS.gene064918.t1 | MTR_6g081020 | 28.239 | 301 | 175 | 13 | 38 | 322 | 34 | 309 | 1.01e-15 | 77.8 |
| MS.gene064918.t1 | MTR_8g098415 | 31.343 | 201 | 118 | 6 | 115 | 308 | 23 | 210 | 1.28e-15 | 75.9 |
| MS.gene064918.t1 | MTR_8g098415 | 32.143 | 196 | 118 | 4 | 67 | 258 | 32 | 216 | 2.26e-15 | 74.7 |
| MS.gene064918.t1 | MTR_6g053600 | 29.644 | 253 | 139 | 10 | 67 | 301 | 26 | 257 | 2.68e-15 | 75.5 |
| MS.gene064918.t1 | MTR_1g068970 | 28.421 | 190 | 119 | 6 | 112 | 297 | 15 | 191 | 3.00e-13 | 68.9 |
| MS.gene064918.t1 | MTR_2g079710 | 28.333 | 240 | 144 | 7 | 64 | 284 | 86 | 316 | 1.61e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064918.t1 | AT5G04070 | 56.289 | 318 | 139 | 0 | 7 | 324 | 1 | 318 | 1.15e-116 | 342 |
| MS.gene064918.t1 | AT5G15940 | 54.545 | 319 | 144 | 1 | 6 | 323 | 1 | 319 | 9.53e-112 | 327 |
| MS.gene064918.t1 | AT5G15940 | 54.375 | 320 | 145 | 1 | 6 | 324 | 1 | 320 | 6.92e-110 | 324 |
| MS.gene064918.t1 | AT5G15940 | 54.375 | 320 | 145 | 1 | 6 | 324 | 1 | 320 | 6.92e-110 | 324 |
| MS.gene064918.t1 | AT5G15940 | 54.545 | 319 | 144 | 1 | 7 | 324 | 1 | 319 | 1.99e-109 | 323 |
| MS.gene064918.t1 | AT2G37540 | 34.211 | 228 | 133 | 6 | 67 | 290 | 36 | 250 | 6.30e-26 | 104 |
| MS.gene064918.t1 | AT2G37540 | 34.389 | 221 | 128 | 6 | 67 | 283 | 36 | 243 | 2.65e-25 | 103 |
| MS.gene064918.t1 | AT4G24050 | 30.962 | 239 | 148 | 5 | 67 | 300 | 37 | 263 | 2.04e-24 | 100 |
| MS.gene064918.t1 | AT4G24050 | 30.962 | 239 | 148 | 5 | 67 | 300 | 37 | 263 | 6.86e-24 | 100 |
| MS.gene064918.t1 | AT4G23430 | 32.000 | 250 | 149 | 6 | 67 | 308 | 32 | 268 | 3.34e-23 | 98.2 |
| MS.gene064918.t1 | AT1G64590 | 29.958 | 237 | 151 | 4 | 68 | 300 | 38 | 263 | 3.63e-23 | 98.6 |
| MS.gene064918.t1 | AT4G23430 | 31.600 | 250 | 148 | 6 | 67 | 308 | 32 | 266 | 2.67e-22 | 95.9 |
| MS.gene064918.t1 | AT5G50130 | 29.864 | 221 | 139 | 5 | 67 | 283 | 39 | 247 | 1.37e-21 | 92.8 |
| MS.gene064918.t1 | AT5G50130 | 28.692 | 237 | 153 | 5 | 68 | 300 | 40 | 264 | 1.92e-21 | 93.6 |
| MS.gene064918.t1 | AT5G50130 | 28.692 | 237 | 153 | 5 | 68 | 300 | 40 | 264 | 2.47e-21 | 93.6 |
| MS.gene064918.t1 | AT5G50130 | 29.730 | 222 | 137 | 6 | 67 | 283 | 39 | 246 | 3.26e-21 | 91.7 |
| MS.gene064918.t1 | AT4G09750 | 29.231 | 260 | 148 | 9 | 67 | 320 | 46 | 275 | 4.20e-21 | 92.4 |
| MS.gene064918.t1 | AT5G50130 | 28.270 | 237 | 153 | 5 | 68 | 300 | 40 | 263 | 4.31e-21 | 92.4 |
| MS.gene064918.t1 | AT4G23420 | 31.390 | 223 | 128 | 7 | 67 | 281 | 32 | 237 | 5.36e-21 | 91.3 |
| MS.gene064918.t1 | AT5G50130 | 29.680 | 219 | 138 | 5 | 69 | 283 | 8 | 214 | 7.09e-21 | 91.3 |
| MS.gene064918.t1 | AT5G50130 | 28.390 | 236 | 153 | 5 | 69 | 300 | 8 | 231 | 8.47e-21 | 91.3 |
| MS.gene064918.t1 | AT4G23420 | 31.390 | 223 | 128 | 7 | 67 | 281 | 32 | 237 | 9.48e-21 | 90.5 |
| MS.gene064918.t1 | AT5G50130 | 28.270 | 237 | 151 | 6 | 69 | 300 | 8 | 230 | 1.47e-20 | 90.9 |
| MS.gene064918.t1 | AT5G50130 | 29.545 | 220 | 136 | 6 | 69 | 283 | 8 | 213 | 1.53e-20 | 90.5 |
| MS.gene064918.t1 | AT4G23420 | 31.390 | 223 | 128 | 7 | 67 | 281 | 49 | 254 | 1.85e-20 | 90.9 |
| MS.gene064918.t1 | AT4G23420 | 31.390 | 223 | 128 | 7 | 67 | 281 | 32 | 237 | 1.92e-20 | 90.5 |
| MS.gene064918.t1 | AT4G23420 | 31.390 | 223 | 128 | 7 | 67 | 281 | 32 | 237 | 1.92e-20 | 90.5 |
| MS.gene064918.t1 | AT5G02540 | 32.301 | 226 | 136 | 6 | 74 | 295 | 43 | 255 | 6.46e-19 | 86.7 |
| MS.gene064918.t1 | AT4G11410 | 30.769 | 221 | 136 | 5 | 67 | 283 | 32 | 239 | 2.77e-18 | 83.6 |
| MS.gene064918.t1 | AT4G11410 | 30.631 | 222 | 137 | 5 | 66 | 283 | 31 | 239 | 1.34e-17 | 82.4 |
| MS.gene064918.t1 | AT4G23430 | 29.675 | 246 | 150 | 6 | 67 | 308 | 32 | 258 | 2.16e-17 | 82.0 |
| MS.gene064918.t1 | AT4G23430 | 29.268 | 246 | 149 | 6 | 67 | 308 | 32 | 256 | 1.95e-16 | 79.0 |
| MS.gene064918.t1 | AT5G53090 | 31.907 | 257 | 148 | 11 | 37 | 286 | 33 | 269 | 2.80e-16 | 79.3 |
| MS.gene064918.t1 | AT4G27760 | 31.250 | 256 | 148 | 13 | 40 | 285 | 32 | 269 | 8.31e-16 | 77.8 |
| MS.gene064918.t1 | AT5G53100 | 32.618 | 233 | 132 | 9 | 63 | 286 | 43 | 259 | 1.00e-14 | 74.7 |
| MS.gene064918.t1 | AT5G54190 | 27.570 | 214 | 129 | 6 | 64 | 258 | 92 | 298 | 3.27e-14 | 73.6 |
| MS.gene064918.t1 | AT5G61830 | 26.210 | 248 | 137 | 6 | 66 | 279 | 38 | 273 | 4.74e-14 | 72.4 |
| MS.gene064918.t1 | AT5G61830 | 26.210 | 248 | 137 | 6 | 66 | 279 | 38 | 273 | 4.74e-14 | 72.4 |
| MS.gene064918.t1 | AT1G03630 | 27.615 | 239 | 146 | 7 | 64 | 284 | 87 | 316 | 2.42e-12 | 67.8 |
| MS.gene064918.t1 | AT1G03630 | 29.245 | 212 | 125 | 6 | 64 | 257 | 89 | 293 | 2.62e-12 | 67.8 |
| MS.gene064918.t1 | AT4G27440 | 26.250 | 240 | 149 | 7 | 64 | 284 | 88 | 318 | 2.40e-11 | 64.7 |
| MS.gene064918.t1 | AT4G27440 | 26.250 | 240 | 149 | 7 | 64 | 284 | 88 | 318 | 2.40e-11 | 64.7 |
Find 0 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTTTATTATATTTC+TGG | - | 43124:35055-35074 | MS.gene064918:CDS | 10.0% |
| !! | ATAAATAAATTATGCAGATT+AGG | + | 43124:33566-33585 | None:intergenic | 15.0% |
| !! | TATATTAATTATTAGCAACA+TGG | - | 43124:33132-33151 | MS.gene064918:intron | 15.0% |
| !!! | AAAGAAAATAAAAGTTGATT+TGG | + | 43124:34403-34422 | None:intergenic | 15.0% |
| !!! | ATAAAAGGATTTAAAACATA+AGG | + | 43124:32558-32577 | None:intergenic | 15.0% |
| !! | CAGAAAATGAATATTAAAAG+TGG | + | 43124:35102-35121 | None:intergenic | 20.0% |
| !! | CATAATTTATTTATGCTTTG+GGG | - | 43124:33572-33591 | MS.gene064918:intron | 20.0% |
| !! | GAACATGAATAAAAATTAGA+CGG | - | 43124:34976-34995 | MS.gene064918:intron | 20.0% |
| !! | GCATAATTTATTTATGCTTT+GGG | - | 43124:33571-33590 | MS.gene064918:intron | 20.0% |
| !! | TGCATAATTTATTTATGCTT+TGG | - | 43124:33570-33589 | MS.gene064918:intron | 20.0% |
| !!! | CATTTTTTCAAATAGTCTTT+TGG | + | 43124:33023-33042 | None:intergenic | 20.0% |
| !!! | TAGGTTATTTGTTTTTGTAT+AGG | - | 43124:34460-34479 | MS.gene064918:intron | 20.0% |
| !!! | TATCATTTTTTTTTCTGTGT+AGG | - | 43124:32419-32438 | MS.gene064918:intron | 20.0% |
| !!! | TCTATTTTGTCAAATTTCTA+TGG | - | 43124:32876-32895 | MS.gene064918:intron | 20.0% |
| !!! | TGATGTTACATTAACAATTT+TGG | + | 43124:33952-33971 | None:intergenic | 20.0% |
| !!! | TGTTGTGTTTTTATAACTAT+AGG | - | 43124:34441-34460 | MS.gene064918:CDS | 20.0% |
| !!! | TTGATCAATTTTATTGTGAA+TGG | + | 43124:32652-32671 | None:intergenic | 20.0% |
| ! | AAAGAAAAAAGAACTTACAC+CGG | + | 43124:32359-32378 | None:intergenic | 25.0% |
| ! | AACAAAAATACATGCTAGTT+AGG | + | 43124:34291-34310 | None:intergenic | 25.0% |
| ! | AATAATGAAATTTGCAAGAG+AGG | + | 43124:32386-32405 | None:intergenic | 25.0% |
| ! | AATAGTGTTGTAGAAAATAG+TGG | + | 43124:32592-32611 | None:intergenic | 25.0% |
| ! | AGTTATAAAAACACAACACT+TGG | + | 43124:34439-34458 | None:intergenic | 25.0% |
| ! | ATAATGAAATTTGCAAGAGA+GGG | + | 43124:32385-32404 | None:intergenic | 25.0% |
| ! | ATCACAGTAATACTTTCATT+AGG | + | 43124:34489-34508 | None:intergenic | 25.0% |
| ! | ATTAAGTGATCTTACTCTTT+GGG | - | 43124:34028-34047 | MS.gene064918:intron | 25.0% |
| ! | CAAATACTAATAAACAATGC+CGG | - | 43124:33354-33373 | MS.gene064918:CDS | 25.0% |
| ! | GATAAATAATCTTGCATCAA+AGG | + | 43124:33755-33774 | None:intergenic | 25.0% |
| ! | GTTATAAAAACACAACACTT+GGG | + | 43124:34438-34457 | None:intergenic | 25.0% |
| ! | TAGACCATAACAAAGATTAA+AGG | - | 43124:33210-33229 | MS.gene064918:CDS | 25.0% |
| ! | TATTAAGTGATCTTACTCTT+TGG | - | 43124:34027-34046 | MS.gene064918:intron | 25.0% |
| !! | AAAGCTTAAATCATTTTGCA+AGG | + | 43124:35031-35050 | None:intergenic | 25.0% |
| !! | AAAGCTTTATATAATCACAG+TGG | + | 43124:32684-32703 | None:intergenic | 25.0% |
| !! | AAAGGATATGTTGTTGTTAT+TGG | - | 43124:32486-32505 | MS.gene064918:intron | 25.0% |
| !! | GGGAAAGATTAATTTGATAA+AGG | - | 43124:32150-32169 | MS.gene064918:CDS | 25.0% |
| !!! | AGTTCTGAACTTTGAATTAA+AGG | - | 43124:34681-34700 | MS.gene064918:intron | 25.0% |
| !!! | ATATTTCTGGTTAATAACCA+TGG | - | 43124:35068-35087 | MS.gene064918:CDS | 25.0% |
| !!! | CTTATTGATTTTCTCTACAA+TGG | - | 43124:34073-34092 | MS.gene064918:intron | 25.0% |
| !!! | TTAAATGTCAACTTTTGAGA+TGG | - | 43124:33617-33636 | MS.gene064918:CDS | 25.0% |
| !!! | TTAACAATTTTGGAAGATAC+AGG | + | 43124:33942-33961 | None:intergenic | 25.0% |
| AAACCAAAAGTCACTCTTAT+TGG | + | 43124:34927-34946 | None:intergenic | 30.0% | |
| AACAATTTGTAGGAAAGTCA+TGG | + | 43124:34545-34564 | None:intergenic | 30.0% | |
| ACTAAGACAATAGACAAACA+TGG | + | 43124:33793-33812 | None:intergenic | 30.0% | |
| ATACATGCTAGTTAGGAATT+AGG | + | 43124:34284-34303 | None:intergenic | 30.0% | |
| ATGAGAAAATGCAACAGAAA+AGG | + | 43124:32239-32258 | None:intergenic | 30.0% | |
| ATGATCGGCACAAATTATAT+CGG | - | 43124:33870-33889 | MS.gene064918:intron | 30.0% | |
| ATGGTAATAAGTAAGTGAGT+TGG | + | 43124:35385-35404 | None:intergenic | 30.0% | |
| ATTAAGATCTTCACAATGCA+TGG | + | 43124:33169-33188 | None:intergenic | 30.0% | |
| ATTGACATAATCACGAGATT+TGG | + | 43124:32729-32748 | None:intergenic | 30.0% | |
| ATTGTATCCTTAACAAGAGA+GGG | + | 43124:34725-34744 | None:intergenic | 30.0% | |
| CAGAACTATATGAGAATTAC+TGG | + | 43124:34668-34687 | None:intergenic | 30.0% | |
| CCAACCTTTAATCTTTGTTA+TGG | + | 43124:33217-33236 | None:intergenic | 30.0% | |
| CCATAACAAAGATTAAAGGT+TGG | - | 43124:33214-33233 | MS.gene064918:CDS | 30.0% | |
| GAAAGAGTGGAAAATATAGT+TGG | + | 43124:33843-33862 | None:intergenic | 30.0% | |
| TAATTAGCCAATGAGTTTGA+TGG | - | 43124:34811-34830 | MS.gene064918:intron | 30.0% | |
| TACATGCTAGTTAGGAATTA+GGG | + | 43124:34283-34302 | None:intergenic | 30.0% | |
| TGGTGTATGTGTCTATATAT+TGG | - | 43124:32941-32960 | MS.gene064918:intron | 30.0% | |
| TGTTATGGTCTATCAAACAA+CGG | + | 43124:33202-33221 | None:intergenic | 30.0% | |
| TTCTCATTACCAACTGTTTA+AGG | - | 43124:32252-32271 | MS.gene064918:intron | 30.0% | |
| TTCTTCAGTTACTAATATGC+AGG | - | 43124:34126-34145 | MS.gene064918:intron | 30.0% | |
| ! | ACAATTTTTGTCTCCCAAAA+AGG | - | 43124:34757-34776 | MS.gene064918:intron | 30.0% |
| ! | ACCTTTTATTGTGTTATGCA+AGG | + | 43124:33511-33530 | None:intergenic | 30.0% |
| ! | ATCAAACTCATTGGCTAATT+AGG | + | 43124:34812-34831 | None:intergenic | 30.0% |
| ! | CATTTTTCCATCAAACTCAT+TGG | + | 43124:34821-34840 | None:intergenic | 30.0% |
| ! | CTATATGAGAATTACTGGTT+TGG | + | 43124:34663-34682 | None:intergenic | 30.0% |
| ! | GTGGATTGTTAGCATATAAA+AGG | + | 43124:32573-32592 | None:intergenic | 30.0% |
| ! | TACAACGGATGCATTTTTAT+GGG | - | 43124:33727-33746 | MS.gene064918:intron | 30.0% |
| !! | AGAAGCATTTGTATGTACAA+CGG | - | 43124:33712-33731 | MS.gene064918:intron | 30.0% |
| !! | GGTGTTATTTATGCAACAAT+AGG | + | 43124:34906-34925 | None:intergenic | 30.0% |
| !! | TTATTTATGCTTTGGGGATA+TGG | - | 43124:33578-33597 | MS.gene064918:CDS | 30.0% |
| AAATGATTATCCTACCAGCT+CGG | + | 43124:33983-34002 | None:intergenic | 35.0% | |
| AACCACTAACACAGAAGATT+AGG | + | 43124:33442-33461 | None:intergenic | 35.0% | |
| AAGAAGTGGTAATAGAAGCA+TGG | + | 43124:33910-33929 | None:intergenic | 35.0% | |
| AATTAGGTAGTTGTAGCTTC+AGG | + | 43124:34796-34815 | None:intergenic | 35.0% | |
| ACAAAATCATATCCTACCCA+AGG | - | 43124:32290-32309 | MS.gene064918:CDS | 35.0% | |
| ACAAGACACTATGTTCTGAT+TGG | + | 43124:34626-34645 | None:intergenic | 35.0% | |
| ACTTTCTATTAGTGCATGTC+TGG | + | 43124:32764-32783 | None:intergenic | 35.0% | |
| AGACATGCACTAATAGAAAG+TGG | - | 43124:32763-32782 | MS.gene064918:intron | 35.0% | |
| AGCATTCTTACCTAAATTCC+TGG | - | 43124:33057-33076 | MS.gene064918:intron | 35.0% | |
| AGTTGTGCAGAAAAGAACTT+GGG | + | 43124:34572-34591 | None:intergenic | 35.0% | |
| ATGTTTGTTTGTACAACTCC+AGG | + | 43124:35151-35170 | None:intergenic | 35.0% | |
| ATTAGGTAGTTGTAGCTTCA+GGG | + | 43124:34795-34814 | None:intergenic | 35.0% | |
| CACAACACTTGGGAAAAAAA+TGG | + | 43124:34428-34447 | None:intergenic | 35.0% | |
| CATTGTATCCTTAACAAGAG+AGG | + | 43124:34726-34745 | None:intergenic | 35.0% | |
| CTCGATTCAATTCTTGAGAA+TGG | - | 43124:32201-32220 | MS.gene064918:intron | 35.0% | |
| CTTGGGAAACAACAATTTGT+AGG | + | 43124:34555-34574 | None:intergenic | 35.0% | |
| GAAGCATGGTCATAACAAAT+GGG | + | 43124:33896-33915 | None:intergenic | 35.0% | |
| GCCTTGCATAACACAATAAA+AGG | - | 43124:33507-33526 | MS.gene064918:intron | 35.0% | |
| GCTTTATATAATCACAGTGG+CGG | + | 43124:32681-32700 | None:intergenic | 35.0% | |
| TAAAAGTGGAGTAGAAACCA+TGG | + | 43124:35088-35107 | None:intergenic | 35.0% | |
| TACTCATAGATCTGAGCATA+TGG | + | 43124:34202-34221 | None:intergenic | 35.0% | |
| TATCAGTTCCATAAAGTTCC+TGG | + | 43124:33666-33685 | None:intergenic | 35.0% | |
| TCAATCCATACCAGGAATTT+AGG | + | 43124:33070-33089 | None:intergenic | 35.0% | |
| TCTTACCTAAATTCCTGGTA+TGG | - | 43124:33062-33081 | MS.gene064918:intron | 35.0% | |
| TGATGTTTCGAAATGACTGA+AGG | - | 43124:35350-35369 | MS.gene064918:CDS | 35.0% | |
| TTCCTAATCTTCTGTGTTAG+TGG | - | 43124:33437-33456 | MS.gene064918:intron | 35.0% | |
| TTGATGAGGGAACAGTATTT+GGG | - | 43124:34149-34168 | MS.gene064918:CDS | 35.0% | |
| TTGTATCCTTAACAAGAGAG+GGG | + | 43124:34724-34743 | None:intergenic | 35.0% | |
| ! | ACACCAATAAGAGTGACTTT+TGG | - | 43124:34921-34940 | MS.gene064918:intron | 35.0% |
| ! | AGAAGCATGGTCATAACAAA+TGG | + | 43124:33897-33916 | None:intergenic | 35.0% |
| ! | GTACAACGGATGCATTTTTA+TGG | - | 43124:33726-33745 | MS.gene064918:intron | 35.0% |
| ! | TTCTTTTCTGCACAACTCAT+TGG | - | 43124:34575-34594 | MS.gene064918:intron | 35.0% |
| !! | ACTAATATGCAGGTTGATGA+GGG | - | 43124:34136-34155 | MS.gene064918:intron | 35.0% |
| !! | ACTGCTAAAAAAGTACTCAC+AGG | + | 43124:35292-35311 | None:intergenic | 35.0% |
| !! | TACTAATATGCAGGTTGATG+AGG | - | 43124:34135-34154 | MS.gene064918:intron | 35.0% |
| !!! | AACTCATTGGCTCTTACTTT+TGG | - | 43124:34588-34607 | MS.gene064918:intron | 35.0% |
| AGAGCGAATCCTTAAACAGT+TGG | + | 43124:32264-32283 | None:intergenic | 40.0% | |
| AGAGCTTGAGAAGGTTCTAT+AGG | + | 43124:34105-34124 | None:intergenic | 40.0% | |
| AGGAGATGTTGCAAGTATTC+CGG | + | 43124:33376-33395 | None:intergenic | 40.0% | |
| AGTAAGAGCGGCATCAATAA+TGG | + | 43124:35266-35285 | None:intergenic | 40.0% | |
| ATCAGAGCAATTGTTGTCAG+AGG | - | 43124:33102-33121 | MS.gene064918:intron | 40.0% | |
| ATTTGCATGACATGATCACC+AGG | - | 43124:33645-33664 | MS.gene064918:CDS | 40.0% | |
| CATGATCACCAGGAACTTTA+TGG | - | 43124:33655-33674 | MS.gene064918:CDS | 40.0% | |
| CGTGGTCTAGGTTATTTAGT+GGG | - | 43124:32974-32993 | MS.gene064918:intron | 40.0% | |
| CTGAAGAAAAGAGCTTGAGA+AGG | + | 43124:34114-34133 | None:intergenic | 40.0% | |
| GAGTTGTGCAGAAAAGAACT+TGG | + | 43124:34573-34592 | None:intergenic | 40.0% | |
| GGCTTATTAGGAAAAGTGGA+AGG | + | 43124:32322-32341 | None:intergenic | 40.0% | |
| TAGTCACAACTCACAAGTGT+CGG | + | 43124:32843-32862 | None:intergenic | 40.0% | |
| TCAAGAATTGAATCGAGCAG+AGG | + | 43124:32198-32217 | None:intergenic | 40.0% | |
| TCTGATGAGATTTACCCATC+TGG | + | 43124:34361-34380 | None:intergenic | 40.0% | |
| TTAGGTAGTTGTAGCTTCAG+GGG | + | 43124:34794-34813 | None:intergenic | 40.0% | |
| TTAGTGCATGTCTGGATTGA+TGG | + | 43124:32756-32775 | None:intergenic | 40.0% | |
| TTGTGTTGTGTCTGGTGTAT+TGG | - | 43124:32921-32940 | MS.gene064918:intron | 40.0% | |
| TTTCTATGGTGTCTATGCGT+CGG | - | 43124:32890-32909 | MS.gene064918:intron | 40.0% | |
| ! | AACGGGCTTATTAGGAAAAG+TGG | + | 43124:32326-32345 | None:intergenic | 40.0% |
| ! | ATAATTTGTGCCGATCATCC+TGG | + | 43124:33868-33887 | None:intergenic | 40.0% |
| ! | GCATGCAAGCTTTCTAAGAA+AGG | - | 43124:32468-32487 | MS.gene064918:intron | 40.0% |
| ! | GTTGATGAGGGAACAGTATT+TGG | - | 43124:34148-34167 | MS.gene064918:CDS | 40.0% |
| ! | TAATTGACTCAACCGACGAA+AGG | + | 43124:33275-33294 | None:intergenic | 40.0% |
| ! | TAATTTGTGCCGATCATCCT+GGG | + | 43124:33867-33886 | None:intergenic | 40.0% |
| ! | TATTTTCCACTCTTTCTCCC+AGG | - | 43124:33847-33866 | MS.gene064918:intron | 40.0% |
| ! | TTTTCTGTGTAGGCAACATC+TGG | - | 43124:32429-32448 | MS.gene064918:intron | 40.0% |
| !! | GCTAAAAAAGTACTCACAGG+CGG | + | 43124:35289-35308 | None:intergenic | 40.0% |
| AAAGTGGAAGGTGAAGACCT+TGG | + | 43124:32310-32329 | None:intergenic | 45.0% | |
| AAGTGGAAGGTGAAGACCTT+GGG | + | 43124:32309-32328 | None:intergenic | 45.0% | |
| AATCCAAAAGCCATTGCTGC+AGG | + | 43124:33314-33333 | None:intergenic | 45.0% | |
| ACAGGACTGCTTTCAAGAAG+TGG | + | 43124:33924-33943 | None:intergenic | 45.0% | |
| ACATCATTTACTCACCGAGC+TGG | - | 43124:33966-33985 | MS.gene064918:intron | 45.0% | |
| ACTCTTTCTCCCAGGATGAT+CGG | - | 43124:33855-33874 | MS.gene064918:intron | 45.0% | |
| AGTGCGTGTTTGACATGTGT+TGG | - | 43124:32814-32833 | MS.gene064918:intron | 45.0% | |
| ATCCAAAAGCCATTGCTGCA+GGG | + | 43124:33313-33332 | None:intergenic | 45.0% | |
| CTATTGGAATCCTCTGAGTG+CGG | - | 43124:35232-35251 | MS.gene064918:CDS | 45.0% | |
| GAAACTCACTTGTGCACTTG+TGG | - | 43124:34870-34889 | MS.gene064918:intron | 45.0% | |
| GCGTGGTCTAGGTTATTTAG+TGG | - | 43124:32973-32992 | MS.gene064918:intron | 45.0% | |
| TATTGGAATCCTCTGAGTGC+GGG | - | 43124:35233-35252 | MS.gene064918:CDS | 45.0% | |
| TCACTTGTGCACTTGTGGTT+GGG | - | 43124:34875-34894 | MS.gene064918:intron | 45.0% | |
| TCTTGAGAATGGCGTTGCTT+TGG | - | 43124:32212-32231 | MS.gene064918:intron | 45.0% | |
| TGCGAGCAGATACACTCTTA+TGG | - | 43124:34848-34867 | MS.gene064918:intron | 45.0% | |
| TGTCAGTGTTGTGTTGTGTC+TGG | - | 43124:32913-32932 | MS.gene064918:intron | 45.0% | |
| TTGTACCGAGCAGTGCAAAT+CGG | + | 43124:33337-33356 | None:intergenic | 45.0% | |
| ! | ATGACGCAAACGGGCTTATT+AGG | + | 43124:32334-32353 | None:intergenic | 45.0% |
| ! | CTGGTATGGATTGATGCAGT+GGG | - | 43124:33076-33095 | MS.gene064918:intron | 45.0% |
| ! | GGAAGCATGCACTTAGAAAG+TGG | + | 43124:32631-32650 | None:intergenic | 45.0% |
| ! | TATATTGGTGCTTCGTTGCG+TGG | - | 43124:32956-32975 | MS.gene064918:intron | 45.0% |
| !! | AGCCTGAAAAGCTTTGAGGT+GGG | + | 43124:33250-33269 | None:intergenic | 45.0% |
| !! | GGAGGAGTATGCTCCTTTTT+GGG | + | 43124:34773-34792 | None:intergenic | 45.0% |
| !! | TTTTCAGGCTGACCTTTCGT+CGG | - | 43124:33260-33279 | MS.gene064918:intron | 45.0% |
| AAGTTCCAGCAAGCCTGTCT+TGG | - | 43124:35179-35198 | MS.gene064918:intron | 50.0% | |
| AGTTCCAGCAAGCCTGTCTT+GGG | - | 43124:35180-35199 | MS.gene064918:intron | 50.0% | |
| ATCTCCTAGAGTCACAGCTG+AGG | - | 43124:33389-33408 | MS.gene064918:CDS | 50.0% | |
| CAAAGAATGCCACCCAAGAC+AGG | + | 43124:35195-35214 | None:intergenic | 50.0% | |
| CATTTACTCACCGAGCTGGT+AGG | - | 43124:33970-33989 | MS.gene064918:intron | 50.0% | |
| CCACTGCATCAATCCATACC+AGG | + | 43124:33078-33097 | None:intergenic | 50.0% | |
| CGCACTCAGAGGATTCCAAT+AGG | + | 43124:35234-35253 | None:intergenic | 50.0% | |
| CTCACTTGTGCACTTGTGGT+TGG | - | 43124:34874-34893 | MS.gene064918:intron | 50.0% | |
| GATCATCCTGGGAGAAAGAG+TGG | + | 43124:33856-33875 | None:intergenic | 50.0% | |
| GGTCAGCCTGAAAAGCTTTG+AGG | + | 43124:33254-33273 | None:intergenic | 50.0% | |
| TACCCATCTGGCAAAGCTGT+CGG | + | 43124:34349-34368 | None:intergenic | 50.0% | |
| TACGCACCCCTCTCTTGTTA+AGG | - | 43124:34715-34734 | MS.gene064918:intron | 50.0% | |
| TCAGTACTTCCCTGCAGCAA+TGG | - | 43124:33301-33320 | MS.gene064918:intron | 50.0% | |
| TCTCCTAGAGTCACAGCTGA+GGG | - | 43124:33390-33409 | MS.gene064918:CDS | 50.0% | |
| TGCAAGGCAAAGCATGAGCA+TGG | + | 43124:33495-33514 | None:intergenic | 50.0% | |
| TGCATCAGTGTTGCAGATCC+TGG | - | 43124:35130-35149 | MS.gene064918:intron | 50.0% | |
| TGTGTAGGCAACATCTGGCT+TGG | - | 43124:32434-32453 | MS.gene064918:intron | 50.0% | |
| ! | ACTGAAGCGTCTACGCCTAT+TGG | - | 43124:35216-35235 | MS.gene064918:CDS | 50.0% |
| ! | CCTGGTATGGATTGATGCAG+TGG | - | 43124:33075-33094 | MS.gene064918:intron | 50.0% |
| ! | GGATTCCGATTTGCACTGCT+CGG | - | 43124:33329-33348 | MS.gene064918:intron | 50.0% |
| ! | GTGTAGGCAACATCTGGCTT+GGG | - | 43124:32435-32454 | MS.gene064918:intron | 50.0% |
| ! | TACACCGGTGATGACGCAAA+CGG | + | 43124:32344-32363 | None:intergenic | 50.0% |
| ! | TGCCCACCTCAAAGCTTTTC+AGG | - | 43124:33245-33264 | MS.gene064918:intron | 50.0% |
| ! | TTCCCTGCAGCAATGGCTTT+TGG | - | 43124:33308-33327 | MS.gene064918:intron | 50.0% |
| !! | CAGCCTGAAAAGCTTTGAGG+TGG | + | 43124:33251-33270 | None:intergenic | 50.0% |
| !! | GGGAGGAGTATGCTCCTTTT+TGG | + | 43124:34774-34793 | None:intergenic | 50.0% |
| AAGCCCGTTTGCGTCATCAC+CGG | - | 43124:32337-32356 | MS.gene064918:CDS | 55.0% | |
| ACTCACAGGCGGAGTAAGAG+CGG | + | 43124:35278-35297 | None:intergenic | 55.0% | |
| CACCGACAGCTTTGCCAGAT+GGG | - | 43124:34344-34363 | MS.gene064918:intron | 55.0% | |
| GGAAGGTGAAGACCTTGGGT+AGG | + | 43124:32305-32324 | None:intergenic | 55.0% | |
| GGTAGTTGTAGCTTCAGGGG+AGG | + | 43124:34791-34810 | None:intergenic | 55.0% | |
| TAGCCCTCAGCTGTGACTCT+AGG | + | 43124:33396-33415 | None:intergenic | 55.0% | |
| ! | ACACCGGTGATGACGCAAAC+GGG | + | 43124:32343-32362 | None:intergenic | 55.0% |
| ! | AGCGAGTGTTGCGATTCGCA+AGG | - | 43124:34948-34967 | MS.gene064918:intron | 55.0% |
| CCACCGACAGCTTTGCCAGA+TGG | - | 43124:34343-34362 | MS.gene064918:intron | 60.0% | |
| CCATCTGGCAAAGCTGTCGG+TGG | + | 43124:34346-34365 | None:intergenic | 60.0% | |
| GGAATCGTTCCCGCACTCAG+AGG | + | 43124:35245-35264 | None:intergenic | 60.0% | |
| GGTGCTTCGTTGCGTGGTCT+AGG | - | 43124:32962-32981 | MS.gene064918:intron | 60.0% | |
| TCCAGCAAGCCTGTCTTGGG+TGG | - | 43124:35183-35202 | MS.gene064918:intron | 60.0% | |
| GCCACCCAAGACAGGCTTGC+TGG | + | 43124:35187-35206 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 43124 | gene | 32148 | 35413 | 32148 | ID=MS.gene064918 |
| 43124 | mRNA | 32148 | 35413 | 32148 | ID=MS.gene064918.t1;Parent=MS.gene064918 |
| 43124 | exon | 35201 | 35413 | 35201 | ID=MS.gene064918.t1.exon1;Parent=MS.gene064918.t1 |
| 43124 | CDS | 35201 | 35413 | 35201 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 35054 | 35120 | 35054 | ID=MS.gene064918.t1.exon2;Parent=MS.gene064918.t1 |
| 43124 | CDS | 35054 | 35120 | 35054 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 34438 | 34466 | 34438 | ID=MS.gene064918.t1.exon3;Parent=MS.gene064918.t1 |
| 43124 | CDS | 34438 | 34466 | 34438 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 34140 | 34348 | 34140 | ID=MS.gene064918.t1.exon4;Parent=MS.gene064918.t1 |
| 43124 | CDS | 34140 | 34348 | 34140 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 33574 | 33692 | 33574 | ID=MS.gene064918.t1.exon5;Parent=MS.gene064918.t1 |
| 43124 | CDS | 33574 | 33692 | 33574 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 33332 | 33427 | 33332 | ID=MS.gene064918.t1.exon6;Parent=MS.gene064918.t1 |
| 43124 | CDS | 33332 | 33427 | 33332 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 33171 | 33246 | 33171 | ID=MS.gene064918.t1.exon7;Parent=MS.gene064918.t1 |
| 43124 | CDS | 33171 | 33246 | 33171 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 32270 | 32423 | 32270 | ID=MS.gene064918.t1.exon8;Parent=MS.gene064918.t1 |
| 43124 | CDS | 32270 | 32423 | 32270 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| 43124 | exon | 32148 | 32189 | 32148 | ID=MS.gene064918.t1.exon9;Parent=MS.gene064918.t1 |
| 43124 | CDS | 32148 | 32189 | 32148 | ID=cds.MS.gene064918.t1;Parent=MS.gene064918.t1 |
| Gene Sequence |
| Protein sequence |
