Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05158.t1 | AAB05206.1 | 98.2 | 329 | 6 | 0 | 1 | 329 | 1 | 329 | 2.30E-183 | 651.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05158.t1 | F4JJR8 | 71.4 | 329 | 92 | 1 | 1 | 329 | 50 | 376 | 8.7e-139 | 494.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05158.t1 | G7KLR3 | 98.2 | 329 | 6 | 0 | 1 | 329 | 54 | 382 | 1.7e-183 | 651.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05158.t1 | MTR_6g081020 | 98.176 | 329 | 6 | 0 | 1 | 329 | 54 | 382 | 0.0 | 676 |
MS.gene05158.t1 | MTR_1g100395 | 36.328 | 256 | 145 | 7 | 9 | 256 | 30 | 275 | 1.01e-36 | 134 |
MS.gene05158.t1 | MTR_8g098415 | 32.226 | 301 | 179 | 6 | 9 | 303 | 30 | 311 | 2.08e-36 | 133 |
MS.gene05158.t1 | MTR_8g098415 | 32.770 | 296 | 174 | 6 | 9 | 298 | 30 | 306 | 2.59e-36 | 133 |
MS.gene05158.t1 | MTR_1g100335 | 36.187 | 257 | 144 | 8 | 9 | 256 | 30 | 275 | 3.76e-35 | 130 |
MS.gene05158.t1 | MTR_1g100305 | 36.293 | 259 | 141 | 9 | 9 | 256 | 30 | 275 | 1.30e-33 | 126 |
MS.gene05158.t1 | MTR_7g099850 | 31.761 | 318 | 177 | 10 | 7 | 310 | 33 | 324 | 3.57e-33 | 125 |
MS.gene05158.t1 | MTR_1g100335 | 35.897 | 234 | 133 | 6 | 9 | 235 | 30 | 253 | 3.90e-33 | 123 |
MS.gene05158.t1 | MTR_1g100335 | 37.104 | 221 | 123 | 5 | 9 | 222 | 30 | 241 | 9.74e-33 | 122 |
MS.gene05158.t1 | MTR_1g100315 | 30.592 | 304 | 182 | 9 | 9 | 304 | 30 | 312 | 1.11e-31 | 121 |
MS.gene05158.t1 | MTR_8g099995 | 29.221 | 308 | 190 | 7 | 6 | 304 | 33 | 321 | 4.38e-30 | 117 |
MS.gene05158.t1 | MTR_3g077410 | 30.323 | 310 | 176 | 11 | 9 | 304 | 38 | 321 | 5.57e-30 | 117 |
MS.gene05158.t1 | MTR_1g068970 | 29.605 | 304 | 187 | 7 | 8 | 304 | 34 | 317 | 9.02e-30 | 116 |
MS.gene05158.t1 | MTR_8g098415 | 37.374 | 198 | 111 | 3 | 9 | 201 | 30 | 219 | 1.17e-29 | 113 |
MS.gene05158.t1 | MTR_6g053550 | 32.685 | 257 | 156 | 6 | 9 | 256 | 38 | 286 | 1.23e-28 | 113 |
MS.gene05158.t1 | MTR_4g105310 | 31.596 | 307 | 172 | 11 | 7 | 300 | 47 | 328 | 1.82e-28 | 113 |
MS.gene05158.t1 | MTR_4g105310 | 35.319 | 235 | 125 | 8 | 7 | 229 | 47 | 266 | 3.12e-28 | 110 |
MS.gene05158.t1 | MTR_6g053600 | 34.783 | 230 | 129 | 6 | 9 | 226 | 24 | 244 | 5.60e-25 | 102 |
MS.gene05158.t1 | MTR_8g098415 | 29.304 | 273 | 168 | 6 | 37 | 303 | 1 | 254 | 9.87e-25 | 101 |
MS.gene05158.t1 | MTR_3g009190 | 27.692 | 325 | 184 | 13 | 7 | 306 | 61 | 359 | 1.37e-20 | 91.7 |
MS.gene05158.t1 | MTR_3g009190 | 27.692 | 325 | 184 | 13 | 7 | 306 | 79 | 377 | 1.58e-20 | 91.7 |
MS.gene05158.t1 | MTR_6g453040 | 27.027 | 333 | 188 | 14 | 1 | 308 | 37 | 339 | 9.35e-20 | 89.0 |
MS.gene05158.t1 | MTR_1g068970 | 30.457 | 197 | 127 | 5 | 67 | 256 | 20 | 213 | 3.17e-19 | 85.9 |
MS.gene05158.t1 | MTR_3g091070 | 26.462 | 325 | 170 | 14 | 7 | 306 | 39 | 319 | 6.95e-18 | 83.2 |
MS.gene05158.t1 | MTR_3g009190 | 27.500 | 320 | 181 | 13 | 12 | 306 | 65 | 358 | 9.56e-17 | 80.5 |
MS.gene05158.t1 | MTR_6g041980 | 27.092 | 251 | 157 | 9 | 11 | 255 | 69 | 299 | 6.11e-16 | 77.8 |
MS.gene05158.t1 | MTR_6g041980 | 31.469 | 143 | 89 | 3 | 11 | 152 | 69 | 203 | 4.85e-15 | 74.3 |
MS.gene05158.t1 | MTR_2g079710 | 27.052 | 329 | 190 | 12 | 10 | 306 | 88 | 398 | 5.46e-15 | 75.5 |
MS.gene05158.t1 | MTR_4g087460 | 28.358 | 268 | 143 | 10 | 11 | 234 | 24 | 286 | 2.73e-13 | 69.7 |
MS.gene05158.t1 | MTR_6g453040 | 28.632 | 234 | 144 | 8 | 7 | 227 | 61 | 284 | 4.01e-13 | 69.3 |
MS.gene05158.t1 | MTR_7g076660 | 25.896 | 251 | 134 | 9 | 12 | 221 | 11 | 250 | 7.72e-13 | 68.2 |
MS.gene05158.t1 | MTR_7g076660 | 25.896 | 251 | 134 | 9 | 12 | 221 | 10 | 249 | 8.18e-13 | 68.2 |
MS.gene05158.t1 | MTR_8g031960 | 30.682 | 176 | 93 | 3 | 11 | 163 | 10 | 179 | 9.61e-13 | 68.2 |
MS.gene05158.t1 | MTR_8g031980 | 27.143 | 210 | 119 | 4 | 3 | 189 | 1 | 199 | 7.67e-12 | 65.5 |
MS.gene05158.t1 | MTR_8g032010 | 24.324 | 259 | 136 | 5 | 11 | 218 | 9 | 258 | 8.35e-12 | 65.5 |
MS.gene05158.t1 | MTR_5g062280 | 25.000 | 288 | 157 | 9 | 11 | 249 | 9 | 286 | 1.01e-11 | 65.1 |
MS.gene05158.t1 | MTR_1g051165 | 28.194 | 227 | 139 | 10 | 2 | 222 | 10 | 218 | 1.03e-11 | 65.1 |
MS.gene05158.t1 | MTR_8g032000 | 24.904 | 261 | 132 | 7 | 11 | 218 | 9 | 258 | 3.00e-11 | 63.5 |
MS.gene05158.t1 | MTR_6g453040 | 31.285 | 179 | 104 | 7 | 7 | 176 | 61 | 229 | 3.64e-11 | 62.8 |
MS.gene05158.t1 | MTR_8g031940 | 26.154 | 260 | 131 | 7 | 11 | 218 | 9 | 259 | 6.36e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05158.t1 | AT4G27760 | 71.429 | 329 | 92 | 1 | 1 | 329 | 50 | 376 | 1.13e-170 | 479 |
MS.gene05158.t1 | AT5G53090 | 70.821 | 329 | 94 | 1 | 1 | 329 | 49 | 375 | 8.29e-164 | 461 |
MS.gene05158.t1 | AT5G53100 | 66.873 | 323 | 106 | 1 | 3 | 324 | 39 | 361 | 1.71e-146 | 417 |
MS.gene05158.t1 | AT4G23430 | 35.798 | 257 | 148 | 6 | 9 | 257 | 30 | 277 | 1.68e-35 | 131 |
MS.gene05158.t1 | AT2G37540 | 32.588 | 313 | 178 | 8 | 9 | 313 | 34 | 321 | 1.03e-34 | 129 |
MS.gene05158.t1 | AT4G23420 | 35.409 | 257 | 149 | 6 | 9 | 257 | 30 | 277 | 4.28e-34 | 127 |
MS.gene05158.t1 | AT4G23420 | 35.409 | 257 | 149 | 6 | 9 | 257 | 30 | 277 | 4.28e-34 | 127 |
MS.gene05158.t1 | AT4G23420 | 35.409 | 257 | 149 | 6 | 9 | 257 | 47 | 294 | 4.43e-34 | 127 |
MS.gene05158.t1 | AT4G23430 | 36.187 | 257 | 145 | 7 | 9 | 257 | 30 | 275 | 1.38e-33 | 126 |
MS.gene05158.t1 | AT4G23430 | 35.039 | 254 | 144 | 7 | 9 | 257 | 30 | 267 | 4.17e-32 | 122 |
MS.gene05158.t1 | AT2G37540 | 37.719 | 228 | 124 | 5 | 9 | 228 | 34 | 251 | 7.33e-32 | 120 |
MS.gene05158.t1 | AT4G23420 | 38.009 | 221 | 113 | 6 | 9 | 218 | 30 | 237 | 1.69e-31 | 119 |
MS.gene05158.t1 | AT4G23420 | 38.009 | 221 | 113 | 6 | 9 | 218 | 30 | 237 | 1.70e-31 | 119 |
MS.gene05158.t1 | AT4G23430 | 35.433 | 254 | 141 | 8 | 9 | 257 | 30 | 265 | 3.45e-30 | 117 |
MS.gene05158.t1 | AT5G50130 | 35.776 | 232 | 132 | 7 | 5 | 229 | 33 | 254 | 8.04e-30 | 114 |
MS.gene05158.t1 | AT4G11410 | 30.592 | 304 | 184 | 7 | 9 | 305 | 30 | 313 | 2.06e-29 | 115 |
MS.gene05158.t1 | AT5G50130 | 35.622 | 233 | 132 | 8 | 5 | 229 | 33 | 255 | 3.51e-29 | 113 |
MS.gene05158.t1 | AT5G50130 | 35.426 | 223 | 128 | 6 | 5 | 220 | 33 | 246 | 8.11e-29 | 113 |
MS.gene05158.t1 | AT5G50130 | 35.268 | 224 | 128 | 7 | 5 | 220 | 33 | 247 | 1.94e-28 | 112 |
MS.gene05158.t1 | AT5G50130 | 35.268 | 224 | 128 | 7 | 5 | 220 | 33 | 247 | 3.39e-28 | 112 |
MS.gene05158.t1 | AT4G24050 | 32.061 | 262 | 157 | 7 | 6 | 256 | 32 | 283 | 9.56e-28 | 110 |
MS.gene05158.t1 | AT1G64590 | 30.769 | 312 | 188 | 9 | 6 | 308 | 32 | 324 | 3.28e-27 | 109 |
MS.gene05158.t1 | AT4G11410 | 35.616 | 219 | 125 | 5 | 9 | 220 | 30 | 239 | 4.26e-27 | 107 |
MS.gene05158.t1 | AT5G50130 | 34.545 | 220 | 128 | 6 | 8 | 220 | 3 | 213 | 1.14e-26 | 107 |
MS.gene05158.t1 | AT4G24050 | 34.513 | 226 | 128 | 6 | 6 | 221 | 32 | 247 | 1.15e-26 | 106 |
MS.gene05158.t1 | AT5G50130 | 34.545 | 220 | 128 | 6 | 8 | 220 | 3 | 213 | 1.99e-26 | 106 |
MS.gene05158.t1 | AT5G50130 | 34.389 | 221 | 128 | 7 | 8 | 220 | 3 | 214 | 4.26e-26 | 105 |
MS.gene05158.t1 | AT5G50130 | 34.389 | 221 | 128 | 7 | 8 | 220 | 3 | 214 | 7.34e-26 | 105 |
MS.gene05158.t1 | AT5G15940 | 26.518 | 313 | 191 | 10 | 11 | 304 | 62 | 354 | 3.56e-22 | 95.9 |
MS.gene05158.t1 | AT5G15940 | 26.518 | 313 | 191 | 10 | 11 | 304 | 63 | 355 | 3.97e-22 | 95.9 |
MS.gene05158.t1 | AT5G15940 | 26.518 | 313 | 191 | 10 | 11 | 304 | 63 | 355 | 3.97e-22 | 95.9 |
MS.gene05158.t1 | AT5G15940 | 31.140 | 228 | 134 | 7 | 11 | 223 | 63 | 282 | 1.29e-21 | 94.0 |
MS.gene05158.t1 | AT5G02540 | 27.055 | 292 | 188 | 5 | 19 | 304 | 44 | 316 | 1.43e-21 | 94.0 |
MS.gene05158.t1 | AT4G09750 | 29.545 | 220 | 141 | 7 | 6 | 223 | 41 | 248 | 1.05e-19 | 88.6 |
MS.gene05158.t1 | AT5G54190 | 26.462 | 325 | 193 | 12 | 12 | 306 | 96 | 404 | 2.33e-17 | 82.8 |
MS.gene05158.t1 | AT5G04070 | 29.185 | 233 | 140 | 8 | 11 | 227 | 61 | 284 | 2.59e-17 | 82.0 |
MS.gene05158.t1 | AT1G03630 | 31.489 | 235 | 120 | 10 | 10 | 216 | 91 | 312 | 1.53e-13 | 71.2 |
MS.gene05158.t1 | AT1G03630 | 31.489 | 235 | 120 | 10 | 10 | 216 | 89 | 310 | 1.64e-13 | 71.2 |
MS.gene05158.t1 | AT4G27440 | 24.620 | 329 | 194 | 11 | 12 | 306 | 92 | 400 | 4.31e-13 | 70.1 |
MS.gene05158.t1 | AT4G27440 | 24.620 | 329 | 194 | 11 | 12 | 306 | 92 | 400 | 4.31e-13 | 70.1 |
Find 66 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCCAGTTTGAAGAGATTT+TGG | 0.205768 | 6.4:+51570516 | None:intergenic |
TTCAAACATCACATGAAGTA+TGG | 0.235228 | 6.4:-51569850 | MS.gene05158:CDS |
CAGACTCAATCTGCCACTTC+TGG | 0.257798 | 6.4:+51573282 | None:intergenic |
GATCTTACTTGTATTGTTAC+TGG | 0.260757 | 6.4:-51575378 | MS.gene05158:CDS |
GACTAGGAGAGCCCCTAATA+AGG | 0.290936 | 6.4:+51572196 | None:intergenic |
TTTGCTGCAATGCAGGTTCT+AGG | 0.298041 | 6.4:-51570006 | MS.gene05158:intron |
TGCAGGCAATTGGCAGAATC+AGG | 0.313186 | 6.4:-51573356 | MS.gene05158:intron |
GCTTCTTCTGAAGCATTTGC+AGG | 0.349963 | 6.4:+51569881 | None:intergenic |
CTTCCAAAATCTCTTCAAAC+TGG | 0.376839 | 6.4:-51570519 | MS.gene05158:CDS |
GAGTCTGATGGATTGGGATT+GGG | 0.401874 | 6.4:-51573266 | MS.gene05158:CDS |
TTCTCCATTATGCAGGCAAT+TGG | 0.408502 | 6.4:-51573366 | MS.gene05158:intron |
ACATTGGTCTGGACAATTCC+AGG | 0.412615 | 6.4:+51570926 | None:intergenic |
TTTCTGTAGATGCATCATAT+TGG | 0.419243 | 6.4:-51572039 | MS.gene05158:intron |
GGAGGTAGATCTTCTCTCAT+TGG | 0.419719 | 6.4:-51572645 | MS.gene05158:CDS |
CACGCTCTCATTAATAATGC+TGG | 0.431551 | 6.4:-51572572 | MS.gene05158:CDS |
CGACAATCATGAGAAATATA+CGG | 0.433541 | 6.4:+51569905 | None:intergenic |
ATCAGGGGCACATGTTGTTA+TGG | 0.436256 | 6.4:-51573339 | MS.gene05158:CDS |
AGAGATGATTGGTCTTCCTT+CGG | 0.439226 | 6.4:-51569816 | MS.gene05158:CDS |
TTGCAAGGTTTGCTGAAGCT+TGG | 0.446570 | 6.4:-51572616 | MS.gene05158:CDS |
TGAGCATTAAAGATGAAGTA+AGG | 0.453376 | 6.4:+51570483 | None:intergenic |
TGAGTCTGATGGATTGGGAT+TGG | 0.453408 | 6.4:-51573267 | MS.gene05158:CDS |
TGAGAAATATACGGACAAAC+AGG | 0.460128 | 6.4:+51569914 | None:intergenic |
ACTGGTTCCACTAGTGGCAT+TGG | 0.470296 | 6.4:-51575360 | MS.gene05158:CDS |
GAATACTTACAACATTGGTC+TGG | 0.472583 | 6.4:+51570915 | None:intergenic |
GAAGACATGAATGTCACATC+TGG | 0.473158 | 6.4:-51572003 | MS.gene05158:CDS |
CAGATTGAGTCTGATGGATT+GGG | 0.476745 | 6.4:-51573272 | MS.gene05158:CDS |
AGAAGTACTGAGAGCAAAGC+AGG | 0.479514 | 6.4:+51572228 | None:intergenic |
GCAGATTGAGTCTGATGGAT+TGG | 0.487891 | 6.4:-51573273 | MS.gene05158:CDS |
AGATCATTGATTGGTGGTAA+TGG | 0.490608 | 6.4:+51575396 | None:intergenic |
ATTGTTACTGGTTCCACTAG+TGG | 0.493052 | 6.4:-51575366 | MS.gene05158:CDS |
TCTCATTGGATTCTGTTGCA+AGG | 0.494951 | 6.4:-51572631 | MS.gene05158:CDS |
ACTAGGAGAGCCCCTAATAA+GGG | 0.497187 | 6.4:+51572197 | None:intergenic |
TTCATCTTTAATGCTCAAGA+AGG | 0.502521 | 6.4:-51570477 | MS.gene05158:intron |
GAAGAAGTTAAATGTCGTTA+CGG | 0.502541 | 6.4:-51569767 | MS.gene05158:CDS |
TTGATTGGTGGTAATGGCAT+AGG | 0.516233 | 6.4:+51575402 | None:intergenic |
TGATGGATTGGGATTGGGTA+TGG | 0.518126 | 6.4:-51573261 | MS.gene05158:CDS |
TATGAAATACCGACCTCCAA+TGG | 0.522230 | 6.4:+51572541 | None:intergenic |
TGGTCTTCCTTCGGATGCCG+TGG | 0.526429 | 6.4:-51569807 | MS.gene05158:CDS |
TTTCAGAATACTTACAACAT+TGG | 0.527327 | 6.4:+51570910 | None:intergenic |
AGTGTATTATGCGTATCGCC+TGG | 0.534559 | 6.4:-51570944 | MS.gene05158:CDS |
GGCTGTGAGGAACACAAAGC+GGG | 0.536602 | 6.4:-51573318 | MS.gene05158:CDS |
ATACAAGTAAGATCATTGAT+TGG | 0.537048 | 6.4:+51575387 | None:intergenic |
TCAAACATCACATGAAGTAT+GGG | 0.545811 | 6.4:-51569849 | MS.gene05158:CDS |
TACGCATAATACACTGATAC+CGG | 0.548565 | 6.4:+51570952 | None:intergenic |
GCAGGCAATTGGCAGAATCA+GGG | 0.555359 | 6.4:-51573355 | MS.gene05158:intron |
AAGTGGCAGATTGAGTCTGA+TGG | 0.562018 | 6.4:-51573278 | MS.gene05158:CDS |
ACACTGATACCGGCTTCAGC+AGG | 0.565197 | 6.4:+51570962 | None:intergenic |
AACTTCTCCACGGCATCCGA+AGG | 0.567588 | 6.4:+51569800 | None:intergenic |
GCCGTGGAGAAGTTTCTAGA+AGG | 0.568784 | 6.4:-51569791 | MS.gene05158:CDS |
AAGCGACTACCTGCTGAAGC+CGG | 0.571716 | 6.4:-51570971 | MS.gene05158:CDS |
AATTGTTGAAATCAGATGAA+TGG | 0.573431 | 6.4:-51569937 | MS.gene05158:CDS |
TTCAAGACCAATGCCACTAG+TGG | 0.577104 | 6.4:+51575353 | None:intergenic |
GCATTGGTCTTGAAATTGCA+AGG | 0.585583 | 6.4:-51575344 | MS.gene05158:intron |
TTGGCTTGTCTAGGTGATGG+AGG | 0.588994 | 6.4:-51572663 | MS.gene05158:intron |
CTCAAGTAGCAAGTTAGCAC+AGG | 0.592628 | 6.4:-51571950 | MS.gene05158:intron |
CAGGCAATTGGCAGAATCAG+GGG | 0.604548 | 6.4:-51573354 | MS.gene05158:CDS |
TCACAATACTCTGAAACTTG+AGG | 0.611981 | 6.4:+51569959 | None:intergenic |
CAAGTAAGATCATTGATTGG+TGG | 0.613807 | 6.4:+51575390 | None:intergenic |
GGGTATGGCACTCAATGTTG+AGG | 0.629101 | 6.4:-51573246 | MS.gene05158:intron |
TCCTTCTAGAAACTTCTCCA+CGG | 0.634238 | 6.4:+51569790 | None:intergenic |
GGAGAGCCCCTAATAAGGGA+TGG | 0.640568 | 6.4:+51572201 | None:intergenic |
CTAATGACTTGATCCAGAAG+TGG | 0.642788 | 6.4:-51573295 | MS.gene05158:CDS |
TTATTAATGAGAGCGTGCAA+AGG | 0.655244 | 6.4:+51572578 | None:intergenic |
TTCACATTCACAATTCGACT+AGG | 0.656170 | 6.4:+51572180 | None:intergenic |
TGGCTGTGAGGAACACAAAG+CGG | 0.666766 | 6.4:-51573319 | MS.gene05158:CDS |
CACATGTTGTTATGGCTGTG+AGG | 0.673118 | 6.4:-51573331 | MS.gene05158:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGATTGAATATTAATAA+TGG | - | chr6.4:51570721-51570740 | MS.gene05158:intron | 10.0% |
!! | TCAATTATTTAATGAATAAA+AGG | + | chr6.4:51573863-51573882 | None:intergenic | 10.0% |
!!! | GAAACTTAATTTTTTTTTAA+AGG | - | chr6.4:51572068-51572087 | MS.gene05158:intron | 10.0% |
!! | AAAAAATGATCTTTGTAAAT+TGG | - | chr6.4:51570036-51570055 | MS.gene05158:intron | 15.0% |
!! | AAAAATGATCTTTGTAAATT+GGG | - | chr6.4:51570037-51570056 | MS.gene05158:intron | 15.0% |
!! | ATAAATTTGATATTTGATGT+CGG | - | chr6.4:51570911-51570930 | MS.gene05158:intron | 15.0% |
!! | ATTGATCATAAAAAAACAAA+AGG | + | chr6.4:51569968-51569987 | None:intergenic | 15.0% |
!! | TAAAATTTACAATTGTACAT+AGG | - | chr6.4:51573024-51573043 | MS.gene05158:intron | 15.0% |
!! | TTAATAGGTAATAATCAAAA+TGG | + | chr6.4:51573428-51573447 | None:intergenic | 15.0% |
!! | TTGATCATAAAAAAACAAAA+GGG | + | chr6.4:51569967-51569986 | None:intergenic | 15.0% |
!! | TTTAAGTAGAAAAATCAAAA+CGG | - | chr6.4:51571216-51571235 | MS.gene05158:intron | 15.0% |
!!! | AAAATTTGATTTTTGTAACT+TGG | - | chr6.4:51570180-51570199 | MS.gene05158:intron | 15.0% |
!!! | AAATTTGATTTTTGTAACTT+GGG | - | chr6.4:51570181-51570200 | MS.gene05158:intron | 15.0% |
!!! | ATCAATTTTTTGTTTTTGAT+TGG | - | chr6.4:51569854-51569873 | MS.gene05158:CDS | 15.0% |
!!! | ATTTTTTTATCTTTGTAACT+TGG | - | chr6.4:51570315-51570334 | MS.gene05158:intron | 15.0% |
!!! | GTTTTTTTATGATCAATTTT+TGG | - | chr6.4:51569971-51569990 | MS.gene05158:CDS | 15.0% |
!!! | TAATTTTACCATATAATTTC+TGG | - | chr6.4:51574503-51574522 | MS.gene05158:intron | 15.0% |
!!! | TGTTTTTTCTTTTTGATTTT+TGG | - | chr6.4:51570250-51570269 | MS.gene05158:intron | 15.0% |
!!! | TTTTTTTATCTTTGTAACTT+GGG | - | chr6.4:51570316-51570335 | MS.gene05158:intron | 15.0% |
!! | AAAACAATTATGCATTAACA+AGG | - | chr6.4:51573753-51573772 | MS.gene05158:intron | 20.0% |
!! | AAAATTTGATCTTTGTAAGT+TGG | - | chr6.4:51569909-51569928 | MS.gene05158:CDS | 20.0% |
!! | AAATTTGATCTTTGTAAGTT+GGG | - | chr6.4:51569910-51569929 | MS.gene05158:CDS | 20.0% |
!! | AACTATATACATAACTTCAT+TGG | + | chr6.4:51573290-51573309 | None:intergenic | 20.0% |
!! | AATCAAAAAGAAAAAACAAG+AGG | + | chr6.4:51570248-51570267 | None:intergenic | 20.0% |
!! | AATTGATCAGAAAAAACAAA+AGG | + | chr6.4:51569841-51569860 | None:intergenic | 20.0% |
!! | ATGTAAAAATGAGTGATTTA+GGG | - | chr6.4:51570080-51570099 | MS.gene05158:intron | 20.0% |
!! | ATTGATCAGAAAAAACAAAA+GGG | + | chr6.4:51569840-51569859 | None:intergenic | 20.0% |
!! | GTCAAATAATAGATATATAG+CGG | - | chr6.4:51574894-51574913 | MS.gene05158:intron | 20.0% |
!! | TATGTAAAAATGAGTGATTT+AGG | - | chr6.4:51570079-51570098 | MS.gene05158:intron | 20.0% |
!! | TATTATGACCAGAAATTATA+TGG | + | chr6.4:51574514-51574533 | None:intergenic | 20.0% |
!! | TGATAAAAAAGAAGAAACAA+AGG | + | chr6.4:51573997-51574016 | None:intergenic | 20.0% |
!! | TGATACGATTTAGTAATATT+GGG | - | chr6.4:51574324-51574343 | MS.gene05158:intron | 20.0% |
!! | TGATTTATGATAGAACATTA+TGG | + | chr6.4:51571001-51571020 | None:intergenic | 20.0% |
!! | TGCTTGAAATACTAAAAATT+TGG | + | chr6.4:51574869-51574888 | None:intergenic | 20.0% |
!! | TGTATAAAACTTGACAAAAT+AGG | + | chr6.4:51572274-51572293 | None:intergenic | 20.0% |
!! | TTAAATGATGAACACTTTAT+AGG | - | chr6.4:51571689-51571708 | MS.gene05158:intron | 20.0% |
!! | TTAATTACTTCCAACATAAA+TGG | - | chr6.4:51571357-51571376 | MS.gene05158:intron | 20.0% |
!! | TTGAAATTGTGAATGAAAAA+GGG | - | chr6.4:51574114-51574133 | MS.gene05158:intron | 20.0% |
!! | TTGATACGATTTAGTAATAT+TGG | - | chr6.4:51574323-51574342 | MS.gene05158:intron | 20.0% |
!! | TTGTGATTGAATTTAATTGT+GGG | - | chr6.4:51570274-51570293 | MS.gene05158:intron | 20.0% |
!! | TTTGATTGGATATTATTTGT+GGG | - | chr6.4:51569868-51569887 | MS.gene05158:CDS | 20.0% |
!! | TTTGTGATTGAATTTAATTG+TGG | - | chr6.4:51570273-51570292 | MS.gene05158:intron | 20.0% |
!!! | AAAAAGAAAATTTTCTAGTG+TGG | - | chr6.4:51573170-51573189 | MS.gene05158:intron | 20.0% |
!!! | AAATGAATGAATTTTCATGA+TGG | - | chr6.4:51570138-51570157 | MS.gene05158:intron | 20.0% |
!!! | AATGAATGAATTTTCATGAT+GGG | - | chr6.4:51570139-51570158 | MS.gene05158:intron | 20.0% |
!!! | ATTAGCTTAGTTTTGTTTTT+TGG | - | chr6.4:51572337-51572356 | MS.gene05158:intron | 20.0% |
!!! | CATTTTTTTTTACTGCAAAA+TGG | - | chr6.4:51574373-51574392 | MS.gene05158:intron | 20.0% |
!!! | GTTCTCATATTTTTTTGTAT+CGG | - | chr6.4:51574407-51574426 | MS.gene05158:intron | 20.0% |
!!! | TAATTTCTGGTCATAATATA+CGG | - | chr6.4:51574516-51574535 | MS.gene05158:intron | 20.0% |
!!! | TATAAAGTGTTCATCATTTA+AGG | + | chr6.4:51571690-51571709 | None:intergenic | 20.0% |
!!! | TATGATCAATTTTTGGTTTT+TGG | - | chr6.4:51569978-51569997 | MS.gene05158:CDS | 20.0% |
!!! | TGATTTTGATTGAATGAATT+CGG | - | chr6.4:51570474-51570493 | MS.gene05158:intron | 20.0% |
!!! | TTGTAGTAGTTTTTCTATAA+AGG | + | chr6.4:51571161-51571180 | None:intergenic | 20.0% |
!!! | TTTTGATTGGATATTATTTG+TGG | - | chr6.4:51569867-51569886 | MS.gene05158:CDS | 20.0% |
!!! | TTTTTGTTAACTAGATTTTC+AGG | - | chr6.4:51572747-51572766 | MS.gene05158:intron | 20.0% |
!!! | TTTTTTATCTTTGTAACTTG+GGG | - | chr6.4:51570317-51570336 | MS.gene05158:intron | 20.0% |
!!! | TTTTTTTGTATCGGTTTAAA+AGG | - | chr6.4:51574416-51574435 | MS.gene05158:intron | 20.0% |
!!! | TTTTTTTTTAAAGGAGAATG+TGG | - | chr6.4:51572077-51572096 | MS.gene05158:intron | 20.0% |
! | AAAACTAGACCTTTGTAATT+GGG | - | chr6.4:51570763-51570782 | MS.gene05158:intron | 25.0% |
! | AAGAAAAGAATGAACGAATA+AGG | + | chr6.4:51574739-51574758 | None:intergenic | 25.0% |
! | AATTGTTGAAATCAGATGAA+TGG | - | chr6.4:51575213-51575232 | MS.gene05158:intron | 25.0% |
! | ACTATATTGTGAAACAATAG+TGG | + | chr6.4:51574972-51574991 | None:intergenic | 25.0% |
! | AGGGTTTATGCTAAAAAAAA+AGG | - | chr6.4:51573369-51573388 | MS.gene05158:intron | 25.0% |
! | ATACAAGTAAGATCATTGAT+TGG | + | chr6.4:51569766-51569785 | None:intergenic | 25.0% |
! | ATTAAGTTTCAGCAAAAGAT+AGG | + | chr6.4:51572058-51572077 | None:intergenic | 25.0% |
! | CTTGAAATTGTGAATGAAAA+AGG | - | chr6.4:51574113-51574132 | MS.gene05158:intron | 25.0% |
! | GAAAAAACATTAGAGATGAT+TGG | - | chr6.4:51575323-51575342 | MS.gene05158:intron | 25.0% |
! | TAAAACTAGACCTTTGTAAT+TGG | - | chr6.4:51570762-51570781 | MS.gene05158:intron | 25.0% |
! | TAGGTAATAATCAAAATGGT+CGG | + | chr6.4:51573424-51573443 | None:intergenic | 25.0% |
! | TAGTGTGATGTAAAGATTTA+TGG | - | chr6.4:51570869-51570888 | MS.gene05158:intron | 25.0% |
! | TCTTGAAAATTTAATGTGCA+AGG | + | chr6.4:51573635-51573654 | None:intergenic | 25.0% |
! | TGAAATTGTGAATGAAAAAG+GGG | - | chr6.4:51574115-51574134 | MS.gene05158:intron | 25.0% |
! | TGGTATACTATTGAATTATG+AGG | + | chr6.4:51574849-51574868 | None:intergenic | 25.0% |
! | TGTGATTGAATTTAATTGTG+GGG | - | chr6.4:51570275-51570294 | MS.gene05158:intron | 25.0% |
! | TTATTAGTGAAGAAACTTTC+AGG | + | chr6.4:51573257-51573276 | None:intergenic | 25.0% |
! | TTGAGAAAATCAATATCTGT+CGG | - | chr6.4:51571628-51571647 | MS.gene05158:intron | 25.0% |
! | TTGATTGGATATTATTTGTG+GGG | - | chr6.4:51569869-51569888 | MS.gene05158:CDS | 25.0% |
! | TTTCAGAATACTTACAACAT+TGG | + | chr6.4:51574243-51574262 | None:intergenic | 25.0% |
! | TTTGGGTATGATAGAATTAT+AGG | - | chr6.4:51570400-51570419 | MS.gene05158:intron | 25.0% |
! | TTTGGTTGGATATGAATTAT+GGG | - | chr6.4:51569996-51570015 | MS.gene05158:intron | 25.0% |
!! | ATATTTTCACCCAATAGATT+AGG | + | chr6.4:51572155-51572174 | None:intergenic | 25.0% |
!! | ATGAATGAATTTTCATGATG+GGG | - | chr6.4:51570140-51570159 | MS.gene05158:intron | 25.0% |
!! | GTTGTTCTTTCCTTTTTAAT+GGG | - | chr6.4:51573952-51573971 | MS.gene05158:intron | 25.0% |
!! | TGTTGTTCTTTCCTTTTTAA+TGG | - | chr6.4:51573951-51573970 | MS.gene05158:intron | 25.0% |
!! | TTGTTTGTTTAGGATGAAAT+GGG | - | chr6.4:51570349-51570368 | MS.gene05158:intron | 25.0% |
!! | TTTGTTTGTTTAGGATGAAA+TGG | - | chr6.4:51570348-51570367 | MS.gene05158:intron | 25.0% |
!! | TTTTATACAATCTGAATCGA+AGG | - | chr6.4:51572285-51572304 | MS.gene05158:CDS | 25.0% |
!!! | ATCAATTTTTGGTTTTTGGT+TGG | - | chr6.4:51569982-51570001 | MS.gene05158:CDS | 25.0% |
!!! | CATATGTTGTTGATGAATTT+TGG | - | chr6.4:51572628-51572647 | MS.gene05158:CDS | 25.0% |
!!! | CTTTTAGTTGATCATTTTAG+TGG | - | chr6.4:51571568-51571587 | MS.gene05158:intron | 25.0% |
!!! | GCACATTAAATTTTCAAGAA+TGG | - | chr6.4:51573636-51573655 | MS.gene05158:intron | 25.0% |
!!! | GTGTTATTTTTGGGTAATTA+TGG | - | chr6.4:51570113-51570132 | MS.gene05158:intron | 25.0% |
!!! | TTTTGGTTGGATATGAATTA+TGG | - | chr6.4:51569995-51570014 | MS.gene05158:intron | 25.0% |
AAAAAACAAGAGGCCAAAAA+AGG | + | chr6.4:51570238-51570257 | None:intergenic | 30.0% | |
AAAAACAAGAGGCCAAAAAA+GGG | + | chr6.4:51570237-51570256 | None:intergenic | 30.0% | |
AAACTAGACCTTTGTAATTG+GGG | - | chr6.4:51570764-51570783 | MS.gene05158:intron | 30.0% | |
AAATTGCAAGAGACTTACAA+TGG | + | chr6.4:51572998-51573017 | None:intergenic | 30.0% | |
AACAAGATGAAATTGCTTAG+AGG | + | chr6.4:51574479-51574498 | None:intergenic | 30.0% | |
AACAAGATGCAATTATACCA+AGG | + | chr6.4:51573928-51573947 | None:intergenic | 30.0% | |
AAGTGAAACACCATTTATGT+TGG | + | chr6.4:51571370-51571389 | None:intergenic | 30.0% | |
ACAAGATGAAATTGCTTAGA+GGG | + | chr6.4:51574478-51574497 | None:intergenic | 30.0% | |
ACCAACTATCTCAAAATCAT+AGG | - | chr6.4:51571939-51571958 | MS.gene05158:intron | 30.0% | |
ACTATTGAATTATGAGGAGA+AGG | + | chr6.4:51574843-51574862 | None:intergenic | 30.0% | |
AGTATATACAGTTTCCACTT+TGG | - | chr6.4:51573882-51573901 | MS.gene05158:intron | 30.0% | |
AGTCATAGATATTTCGAGAT+TGG | - | chr6.4:51572778-51572797 | MS.gene05158:intron | 30.0% | |
AGTTGTATCTACTCAATCTA+TGG | + | chr6.4:51574783-51574802 | None:intergenic | 30.0% | |
ATGATCTTTGTAAATTGGGT+TGG | - | chr6.4:51570041-51570060 | MS.gene05158:intron | 30.0% | |
ATGCATCTACAGAAAAAAAG+GGG | + | chr6.4:51573106-51573125 | None:intergenic | 30.0% | |
ATGTAAACAACCCTATTTAG+TGG | + | chr6.4:51570965-51570984 | None:intergenic | 30.0% | |
ATTCTGAATTGAATCAGTGA+CGG | - | chr6.4:51572668-51572687 | MS.gene05158:intron | 30.0% | |
ATTTATGTGGCTGTTGTTAT+AGG | - | chr6.4:51570846-51570865 | MS.gene05158:intron | 30.0% | |
CAATTATACCAAGGAAAGTT+AGG | + | chr6.4:51573919-51573938 | None:intergenic | 30.0% | |
CAGAATGATAGACAAAAGAT+AGG | + | chr6.4:51572654-51572673 | None:intergenic | 30.0% | |
CGACAATCATGAGAAATATA+CGG | + | chr6.4:51575248-51575267 | None:intergenic | 30.0% | |
CTAAGCAATTTCATCTTGTT+TGG | - | chr6.4:51574479-51574498 | MS.gene05158:intron | 30.0% | |
GAAGAAGTTAAATGTCGTTA+CGG | - | chr6.4:51575383-51575402 | MS.gene05158:CDS | 30.0% | |
GATCTTACTTGTATTGTTAC+TGG | - | chr6.4:51569772-51569791 | MS.gene05158:CDS | 30.0% | |
GATGCATCTACAGAAAAAAA+GGG | + | chr6.4:51573107-51573126 | None:intergenic | 30.0% | |
GGATATACAAGTTACAGTTA+TGG | + | chr6.4:51572198-51572217 | None:intergenic | 30.0% | |
TCAAACATCACATGAAGTAT+GGG | - | chr6.4:51575301-51575320 | MS.gene05158:intron | 30.0% | |
TCACTTGAAAATGAATTGCT+TGG | - | chr6.4:51574079-51574098 | MS.gene05158:intron | 30.0% | |
TCAGAAAAGCCTAATCTATT+GGG | - | chr6.4:51572143-51572162 | MS.gene05158:intron | 30.0% | |
TCTGCTATGCTATTATATAG+CGG | + | chr6.4:51574938-51574957 | None:intergenic | 30.0% | |
TGAGAAAATCAATATCTGTC+GGG | - | chr6.4:51571629-51571648 | MS.gene05158:intron | 30.0% | |
TGAGCATTAAAGATGAAGTA+AGG | + | chr6.4:51574670-51574689 | None:intergenic | 30.0% | |
TGATGCATCTACAGAAAAAA+AGG | + | chr6.4:51573108-51573127 | None:intergenic | 30.0% | |
TGTAAACAACCCTATTTAGT+GGG | + | chr6.4:51570964-51570983 | None:intergenic | 30.0% | |
TGTTAGTGTACAAAAACTCT+AGG | - | chr6.4:51573718-51573737 | MS.gene05158:intron | 30.0% | |
TTCAAACATCACATGAAGTA+TGG | - | chr6.4:51575300-51575319 | MS.gene05158:intron | 30.0% | |
TTCATCTTTAATGCTCAAGA+AGG | - | chr6.4:51574673-51574692 | MS.gene05158:intron | 30.0% | |
TTGGTTGGATATGAATTATG+GGG | - | chr6.4:51569997-51570016 | MS.gene05158:intron | 30.0% | |
TTTCTGTAGATGCATCATAT+TGG | - | chr6.4:51573111-51573130 | MS.gene05158:intron | 30.0% | |
! | AAGTCTTATCCCACTAAATA+GGG | - | chr6.4:51570952-51570971 | MS.gene05158:CDS | 30.0% |
! | AGTTTGTTCAAATTTCGCAA+TGG | + | chr6.4:51575041-51575060 | None:intergenic | 30.0% |
! | CAATTTGCTTAACTCATTAC+CGG | + | chr6.4:51573497-51573516 | None:intergenic | 30.0% |
! | CCACAAAAGTTTTCAAAAGA+TGG | - | chr6.4:51572865-51572884 | MS.gene05158:intron | 30.0% |
! | GATTTTCTCAATCACTTTAG+AGG | + | chr6.4:51571619-51571638 | None:intergenic | 30.0% |
! | TATCCAGTTTGAAGAGATTT+TGG | + | chr6.4:51574637-51574656 | None:intergenic | 30.0% |
! | TCTATAAAGGAGTATGCATA+TGG | + | chr6.4:51571148-51571167 | None:intergenic | 30.0% |
! | TTGATTTTTGTAACTTGGGT+TGG | - | chr6.4:51570185-51570204 | MS.gene05158:intron | 30.0% |
! | TTTAGTTCATACGCATGATT+GGG | - | chr6.4:51572436-51572455 | MS.gene05158:intron | 30.0% |
!! | AAATGGGTAATTTTGAGAAG+TGG | - | chr6.4:51570365-51570384 | MS.gene05158:intron | 30.0% |
!! | AAGAAAATTTTCTAGTGTGG+TGG | - | chr6.4:51573173-51573192 | MS.gene05158:intron | 30.0% |
!! | AGAAAATTTTCTAGTGTGGT+GGG | - | chr6.4:51573174-51573193 | MS.gene05158:intron | 30.0% |
!! | CCATCTTTTGAAAACTTTTG+TGG | + | chr6.4:51572868-51572887 | None:intergenic | 30.0% |
!! | TTGGAAATGTGTTTAAGTTG+TGG | - | chr6.4:51571728-51571747 | MS.gene05158:intron | 30.0% |
!!! | AATTGATAGGTACCCTTTTT+TGG | - | chr6.4:51570222-51570241 | MS.gene05158:intron | 30.0% |
!!! | AGTTTGACATGTTTTTTTGG+GGG | - | chr6.4:51571751-51571770 | MS.gene05158:intron | 30.0% |
!!! | GAGTTTGACATGTTTTTTTG+GGG | - | chr6.4:51571750-51571769 | MS.gene05158:intron | 30.0% |
!!! | GGAGTTTGACATGTTTTTTT+GGG | - | chr6.4:51571749-51571768 | MS.gene05158:intron | 30.0% |
!!! | TCCTATGATTTTGAGATAGT+TGG | + | chr6.4:51571943-51571962 | None:intergenic | 30.0% |
!!! | TGGAGTTTGACATGTTTTTT+TGG | - | chr6.4:51571748-51571767 | MS.gene05158:intron | 30.0% |
!!! | TTTTAGTTCATACGCATGAT+TGG | - | chr6.4:51572435-51572454 | MS.gene05158:intron | 30.0% |
!!! | TTTTTAACTTCACCTTCTCA+CGG | - | chr6.4:51571999-51572018 | MS.gene05158:CDS | 30.0% |
AAATGAGTGATTTAGGGAAG+TGG | - | chr6.4:51570086-51570105 | MS.gene05158:intron | 35.0% | |
AACAATTGTACATCTGTTCC+TGG | - | chr6.4:51574265-51574284 | MS.gene05158:intron | 35.0% | |
AACCTCTGTTAGGGTAATTA+TGG | - | chr6.4:51570694-51570713 | MS.gene05158:intron | 35.0% | |
AACTAGACCTTTGTAATTGG+GGG | - | chr6.4:51570765-51570784 | MS.gene05158:intron | 35.0% | |
AATGAGTGATTTAGGGAAGT+GGG | - | chr6.4:51570087-51570106 | MS.gene05158:intron | 35.0% | |
AATGTGCTACACTAGAGTTT+AGG | - | chr6.4:51570653-51570672 | MS.gene05158:intron | 35.0% | |
ACAAATCGAGCCCATTAAAA+AGG | + | chr6.4:51573965-51573984 | None:intergenic | 35.0% | |
ACAATTGTACATCTGTTCCT+GGG | - | chr6.4:51574266-51574285 | MS.gene05158:intron | 35.0% | |
AGCACATTACAAACTCTATC+TGG | + | chr6.4:51570641-51570660 | None:intergenic | 35.0% | |
AGTTTCAACTTCATCTATGC+AGG | - | chr6.4:51574600-51574619 | MS.gene05158:intron | 35.0% | |
ATTGCATTCAACCAAAGCAA+TGG | + | chr6.4:51574708-51574727 | None:intergenic | 35.0% | |
CAATTTGTAACTTACCCTCT+CGG | - | chr6.4:51572820-51572839 | MS.gene05158:intron | 35.0% | |
CCATTACTCATTACTGTGTA+AGG | - | chr6.4:51572216-51572235 | MS.gene05158:CDS | 35.0% | |
CCTTACACAGTAATGAGTAA+TGG | + | chr6.4:51572219-51572238 | None:intergenic | 35.0% | |
CGTAGAAGATTATAGAAGCA+TGG | + | chr6.4:51571326-51571345 | None:intergenic | 35.0% | |
CGTCTGTGTCAATGTTTAAT+AGG | + | chr6.4:51573443-51573462 | None:intergenic | 35.0% | |
CTATTTAGTGGGATAAGACT+TGG | + | chr6.4:51570953-51570972 | None:intergenic | 35.0% | |
CTTCCAAAATCTCTTCAAAC+TGG | - | chr6.4:51574631-51574650 | MS.gene05158:intron | 35.0% | |
GAATACTTACAACATTGGTC+TGG | + | chr6.4:51574238-51574257 | None:intergenic | 35.0% | |
GATGAACACTTTATAGGAGT+CGG | - | chr6.4:51571695-51571714 | MS.gene05158:intron | 35.0% | |
GGTTACAGTTACAGTTACAA+AGG | - | chr6.4:51570495-51570514 | MS.gene05158:CDS | 35.0% | |
GTCAGAAAAGCCTAATCTAT+TGG | - | chr6.4:51572142-51572161 | MS.gene05158:intron | 35.0% | |
TACGCATAATACACTGATAC+CGG | + | chr6.4:51574201-51574220 | None:intergenic | 35.0% | |
TAGAGGAGCAAAATTCCAAA+TGG | + | chr6.4:51571602-51571621 | None:intergenic | 35.0% | |
TGAAAGAAAACTGACATGTC+TGG | + | chr6.4:51573056-51573075 | None:intergenic | 35.0% | |
TGAGAAATATACGGACAAAC+AGG | + | chr6.4:51575239-51575258 | None:intergenic | 35.0% | |
TTCACATTCACAATTCGACT+AGG | + | chr6.4:51572973-51572992 | None:intergenic | 35.0% | |
TTGATTGATTAGGGAGAGAT+GGG | - | chr6.4:51570797-51570816 | MS.gene05158:intron | 35.0% | |
TTGGGAATTACTTGTGTTCA+CGG | - | chr6.4:51572454-51572473 | MS.gene05158:intron | 35.0% | |
TTTATAGGAGTCGGATATGT+AGG | - | chr6.4:51571704-51571723 | MS.gene05158:intron | 35.0% | |
TTTATCTTTGTAACTTGGGG+TGG | - | chr6.4:51570320-51570339 | MS.gene05158:intron | 35.0% | |
TTTATGGTTCGTCATTGAAG+TGG | - | chr6.4:51570885-51570904 | MS.gene05158:intron | 35.0% | |
! | ACAGTTTCCACTTTGGTTTA+TGG | - | chr6.4:51573889-51573908 | MS.gene05158:intron | 35.0% |
! | AGATCATTGATTGGTGGTAA+TGG | + | chr6.4:51569757-51569776 | None:intergenic | 35.0% |
! | ATCTTTGTAAGTTGGGTTTG+TGG | - | chr6.4:51569917-51569936 | MS.gene05158:CDS | 35.0% |
! | CAAGTAAGATCATTGATTGG+TGG | + | chr6.4:51569763-51569782 | None:intergenic | 35.0% |
! | CAAGTCTTATCCCACTAAAT+AGG | - | chr6.4:51570951-51570970 | MS.gene05158:CDS | 35.0% |
! | CAGTGGTTGTTGATTGATTA+GGG | - | chr6.4:51570788-51570807 | MS.gene05158:intron | 35.0% |
! | CAGTTTCCACTTTGGTTTAT+GGG | - | chr6.4:51573890-51573909 | MS.gene05158:intron | 35.0% |
! | CGTGTCTGTAATTTGAAGTT+CGG | - | chr6.4:51573589-51573608 | MS.gene05158:intron | 35.0% |
! | GATGCACAAGAGATAGTTTT+TGG | - | chr6.4:51572377-51572396 | MS.gene05158:intron | 35.0% |
! | GCATTGGTATTGAAATTGCA+AGG | - | chr6.4:51569939-51569958 | MS.gene05158:CDS | 35.0% |
! | GGTTTGTTTATCCATTGCTT+TGG | - | chr6.4:51574694-51574713 | MS.gene05158:intron | 35.0% |
! | TCTTTTGCCATCCCTTATTA+GGG | - | chr6.4:51572942-51572961 | MS.gene05158:intron | 35.0% |
! | TGTTCACGGACTTTTCATTT+TGG | - | chr6.4:51572468-51572487 | MS.gene05158:intron | 35.0% |
! | TTATTAATGAGAGCGTGCAA+AGG | + | chr6.4:51572575-51572594 | None:intergenic | 35.0% |
! | TTCTTTTGCCATCCCTTATT+AGG | - | chr6.4:51572941-51572960 | MS.gene05158:intron | 35.0% |
!! | CTCGTTGAAGGTTTTGATAA+CGG | - | chr6.4:51573231-51573250 | MS.gene05158:intron | 35.0% |
!! | GCATTGGCTTTGAAATTGAT+AGG | - | chr6.4:51570209-51570228 | MS.gene05158:intron | 35.0% |
!! | GGCAAAACTCTAAAACAAAC+AGG | + | chr6.4:51574457-51574476 | None:intergenic | 35.0% |
!! | GTTGATCATTTTAGTGGAGT+CGG | - | chr6.4:51571574-51571593 | MS.gene05158:intron | 35.0% |
!! | TACAAAGTGTTGTCGATTAG+TGG | - | chr6.4:51574991-51575010 | MS.gene05158:intron | 35.0% |
!! | TATACGGTGTATTGATTCAC+TGG | - | chr6.4:51574532-51574551 | MS.gene05158:intron | 35.0% |
!! | TCACAATACTCTGAAACTTG+AGG | + | chr6.4:51575194-51575213 | None:intergenic | 35.0% |
!!! | AAGTGGGTAGGTGTTATTTT+TGG | - | chr6.4:51570103-51570122 | MS.gene05158:intron | 35.0% |
!!! | AATGCTGGCATTTTTTCCAT+TGG | - | chr6.4:51572593-51572612 | MS.gene05158:CDS | 35.0% |
!!! | AGTGGGTAGGTGTTATTTTT+GGG | - | chr6.4:51570104-51570123 | MS.gene05158:intron | 35.0% |
!!! | CTTTTCATTTTGGCTTGTCT+AGG | - | chr6.4:51572478-51572497 | MS.gene05158:intron | 35.0% |
!!! | GACACTGATTTGAAGTGTTT+TGG | - | chr6.4:51575080-51575099 | MS.gene05158:intron | 35.0% |
!!! | GTGGTTGCTTTTGTTTGTTT+AGG | - | chr6.4:51570339-51570358 | MS.gene05158:intron | 35.0% |
AACCTTCTGTCAGTCATAAC+TGG | - | chr6.4:51573531-51573550 | MS.gene05158:intron | 40.0% | |
AACTTCATCTATGCAGGCAA+GGG | - | chr6.4:51574606-51574625 | MS.gene05158:intron | 40.0% | |
AGAAACCAACATGTAGACAC+CGG | - | chr6.4:51573475-51573494 | MS.gene05158:intron | 40.0% | |
AGGAAACCCATAAACCAAAG+TGG | + | chr6.4:51573899-51573918 | None:intergenic | 40.0% | |
AGGGGTTGTGTATTTATTGC+AGG | - | chr6.4:51574133-51574152 | MS.gene05158:intron | 40.0% | |
ATGGGTTTCCTAACTTTCCT+TGG | - | chr6.4:51573908-51573927 | MS.gene05158:intron | 40.0% | |
CAAATGTCAGTCGGTAGTTA+AGG | - | chr6.4:51570577-51570596 | MS.gene05158:intron | 40.0% | |
CACGCTCTCATTAATAATGC+TGG | - | chr6.4:51572578-51572597 | MS.gene05158:CDS | 40.0% | |
CGTTATCAAAACCTTCAACG+AGG | + | chr6.4:51573233-51573252 | None:intergenic | 40.0% | |
CTAACAGAGGTTAAGACACA+GGG | + | chr6.4:51570686-51570705 | None:intergenic | 40.0% | |
CTAATGACTTGATCCAGAAG+TGG | - | chr6.4:51571855-51571874 | MS.gene05158:intron | 40.0% | |
CTCCATAATTACCCTAACAG+AGG | + | chr6.4:51570699-51570718 | None:intergenic | 40.0% | |
CTGTGTCTTAACCTCTGTTA+GGG | - | chr6.4:51570685-51570704 | MS.gene05158:intron | 40.0% | |
GAAGACATGAATGTCACATC+TGG | - | chr6.4:51573147-51573166 | MS.gene05158:intron | 40.0% | |
GTTGATTGATTAGGGAGAGA+TGG | - | chr6.4:51570796-51570815 | MS.gene05158:intron | 40.0% | |
TATGAAATACCGACCTCCAA+TGG | + | chr6.4:51572612-51572631 | None:intergenic | 40.0% | |
TCTCATTGGATTCTGTTGCA+AGG | - | chr6.4:51572519-51572538 | MS.gene05158:intron | 40.0% | |
TGTTCATAACCACCTATAGC+CGG | - | chr6.4:51570531-51570550 | MS.gene05158:CDS | 40.0% | |
TGTTGCATTCTCCATTATGC+AGG | - | chr6.4:51571777-51571796 | MS.gene05158:intron | 40.0% | |
TTAAACATTGACACAGACGC+TGG | - | chr6.4:51573444-51573463 | MS.gene05158:intron | 40.0% | |
TTCCACACTTCAAGTCTAGA+GGG | + | chr6.4:51572027-51572046 | None:intergenic | 40.0% | |
TTCTCCATTATGCAGGCAAT+TGG | - | chr6.4:51571784-51571803 | MS.gene05158:intron | 40.0% | |
TTTCCACACTTCAAGTCTAG+AGG | + | chr6.4:51572028-51572047 | None:intergenic | 40.0% | |
! | AGATGGGTGATTTTGTGAAG+TGG | - | chr6.4:51570813-51570832 | MS.gene05158:intron | 40.0% |
! | ATGGGTGATTTTGTGAAGTG+GGG | - | chr6.4:51570815-51570834 | MS.gene05158:intron | 40.0% |
! | CTTTTGCCATCCCTTATTAG+GGG | - | chr6.4:51572943-51572962 | MS.gene05158:intron | 40.0% |
! | GATGGGTGATTTTGTGAAGT+GGG | - | chr6.4:51570814-51570833 | MS.gene05158:intron | 40.0% |
! | GCAGTGGTTGTTGATTGATT+AGG | - | chr6.4:51570787-51570806 | MS.gene05158:intron | 40.0% |
! | TCCTTCTAGAAACTTCTCCA+CGG | + | chr6.4:51575363-51575382 | None:intergenic | 40.0% |
! | TCGAAGGCAACTTTTTGTGT+TGG | - | chr6.4:51572301-51572320 | MS.gene05158:intron | 40.0% |
! | TGGGGGCAATGTTATTTATG+TGG | - | chr6.4:51570833-51570852 | MS.gene05158:intron | 40.0% |
!! | AGAGATGATTGGTCTTCCTT+CGG | - | chr6.4:51575334-51575353 | MS.gene05158:intron | 40.0% |
!! | ATTGTTACTGGTTCCACTAG+TGG | - | chr6.4:51569784-51569803 | MS.gene05158:CDS | 40.0% |
!! | CAGATTGAGTCTGATGGATT+GGG | - | chr6.4:51571878-51571897 | MS.gene05158:intron | 40.0% |
!! | GCATTGGTCTTGAAATTGCA+AGG | - | chr6.4:51569806-51569825 | MS.gene05158:CDS | 40.0% |
!! | GGTAATTTTGAGAAGTGGCT+AGG | - | chr6.4:51570370-51570389 | MS.gene05158:intron | 40.0% |
!!! | AAGTGGCTAGGTGTTGTTTT+TGG | - | chr6.4:51570382-51570401 | MS.gene05158:intron | 40.0% |
!!! | ACTGCTATTTTCCACGATTG+AGG | - | chr6.4:51575058-51575077 | MS.gene05158:intron | 40.0% |
!!! | AGTGGCTAGGTGTTGTTTTT+GGG | - | chr6.4:51570383-51570402 | MS.gene05158:intron | 40.0% |
!!! | ATTTTGGCTTGTCTAGGTGA+TGG | - | chr6.4:51572484-51572503 | MS.gene05158:intron | 40.0% |
!!! | GCATTTTTTCCATTGGAGGT+CGG | - | chr6.4:51572600-51572619 | MS.gene05158:CDS | 40.0% |
!!! | TATCGATTTTGCTGCAATGC+AGG | - | chr6.4:51575137-51575156 | MS.gene05158:intron | 40.0% |
AAGAGCAAAGACAACCGAGA+GGG | + | chr6.4:51572837-51572856 | None:intergenic | 45.0% | |
AAGTGGCAGATTGAGTCTGA+TGG | - | chr6.4:51571872-51571891 | MS.gene05158:intron | 45.0% | |
ACAAAAGTAGCAGCAGCAAC+AGG | - | chr6.4:51573802-51573821 | MS.gene05158:intron | 45.0% | |
ACTAGGAGAGCCCCTAATAA+GGG | + | chr6.4:51572956-51572975 | None:intergenic | 45.0% | |
AGGAGTCGGATATGTAGGTT+TGG | - | chr6.4:51571709-51571728 | MS.gene05158:intron | 45.0% | |
AGTGATTTAGGGAAGTGGGT+AGG | - | chr6.4:51570091-51570110 | MS.gene05158:intron | 45.0% | |
AGTGTATTATGCGTATCGCC+TGG | - | chr6.4:51574206-51574225 | MS.gene05158:intron | 45.0% | |
ATCCCTCTAGACTTGAAGTG+TGG | - | chr6.4:51572022-51572041 | MS.gene05158:CDS | 45.0% | |
ATGTCAGTCGGTAGTTAAGG+TGG | - | chr6.4:51570580-51570599 | MS.gene05158:intron | 45.0% | |
CAAATCAGTGTCCTCAATCG+TGG | + | chr6.4:51575072-51575091 | None:intergenic | 45.0% | |
CAACTTCATCTATGCAGGCA+AGG | - | chr6.4:51574605-51574624 | MS.gene05158:intron | 45.0% | |
CACATGTTGTTATGGCTGTG+AGG | - | chr6.4:51571819-51571838 | MS.gene05158:intron | 45.0% | |
CAGGTACATTTCCTCGTTGA+AGG | - | chr6.4:51573219-51573238 | MS.gene05158:intron | 45.0% | |
CATTACCGGTGTCTACATGT+TGG | + | chr6.4:51573483-51573502 | None:intergenic | 45.0% | |
CCTAACAGAGGTTAAGACAC+AGG | + | chr6.4:51570687-51570706 | None:intergenic | 45.0% | |
CCTGTGTCTTAACCTCTGTT+AGG | - | chr6.4:51570684-51570703 | MS.gene05158:intron | 45.0% | |
CTCAAGTAGCAAGTTAGCAC+AGG | - | chr6.4:51573200-51573219 | MS.gene05158:intron | 45.0% | |
CTGACACTTAGTTCACGACA+TGG | + | chr6.4:51572127-51572146 | None:intergenic | 45.0% | |
GCAAGTCGAAGTAGTCAACA+AGG | - | chr6.4:51571444-51571463 | MS.gene05158:intron | 45.0% | |
GGAGGTAGATCTTCTCTCAT+TGG | - | chr6.4:51572505-51572524 | MS.gene05158:intron | 45.0% | |
GGCTATAGGTGGTTATGAAC+AGG | + | chr6.4:51570532-51570551 | None:intergenic | 45.0% | |
GTCGGTAGTTAAGGTGGTTA+TGG | - | chr6.4:51570586-51570605 | MS.gene05158:intron | 45.0% | |
GTTGGCTGACAAATGTCAGT+CGG | - | chr6.4:51570568-51570587 | MS.gene05158:intron | 45.0% | |
TAAAGGAGAATGTGGCAGCA+AGG | - | chr6.4:51572085-51572104 | MS.gene05158:intron | 45.0% | |
TAAGAGCAAAGACAACCGAG+AGG | + | chr6.4:51572838-51572857 | None:intergenic | 45.0% | |
TCTGCCAATTGCCTGCATAA+TGG | + | chr6.4:51571791-51571810 | None:intergenic | 45.0% | |
TGTGCACTGTTCAACTGACA+GGG | - | chr6.4:51573350-51573369 | MS.gene05158:CDS | 45.0% | |
TTAGTGGAGTCGGATCCATT+TGG | - | chr6.4:51571584-51571603 | MS.gene05158:intron | 45.0% | |
TTCAAGACCAATGCCACTAG+TGG | + | chr6.4:51569800-51569819 | None:intergenic | 45.0% | |
TTGTGCACTGTTCAACTGAC+AGG | - | chr6.4:51573349-51573368 | MS.gene05158:CDS | 45.0% | |
TTTGCTGCAATGCAGGTTCT+AGG | - | chr6.4:51575144-51575163 | MS.gene05158:intron | 45.0% | |
! | AACCACCTATAGCCGGTTTA+GGG | - | chr6.4:51570538-51570557 | MS.gene05158:intron | 45.0% |
! | ACATTGGTCTGGACAATTCC+AGG | + | chr6.4:51574227-51574246 | None:intergenic | 45.0% |
! | ATCAGGGGCACATGTTGTTA+TGG | - | chr6.4:51571811-51571830 | MS.gene05158:intron | 45.0% |
! | GCAGATTGAGTCTGATGGAT+TGG | - | chr6.4:51571877-51571896 | MS.gene05158:intron | 45.0% |
! | GTAAGTTGGGTTTGTGGCAT+TGG | - | chr6.4:51569923-51569942 | MS.gene05158:CDS | 45.0% |
! | TAACCACCTATAGCCGGTTT+AGG | - | chr6.4:51570537-51570556 | MS.gene05158:intron | 45.0% |
! | TGGGTGATTTTGTGAAGTGG+GGG | - | chr6.4:51570816-51570835 | MS.gene05158:intron | 45.0% |
!! | AGAAGTACTGAGAGCAAAGC+AGG | + | chr6.4:51572925-51572944 | None:intergenic | 45.0% |
!! | GAGTCTGATGGATTGGGATT+GGG | - | chr6.4:51571884-51571903 | MS.gene05158:intron | 45.0% |
!! | GCTTCTTCTGAAGCATTTGC+AGG | + | chr6.4:51575272-51575291 | None:intergenic | 45.0% |
!! | TGAGTCTGATGGATTGGGAT+TGG | - | chr6.4:51571883-51571902 | MS.gene05158:intron | 45.0% |
!! | TGATGGATTGGGATTGGGTA+TGG | - | chr6.4:51571889-51571908 | MS.gene05158:intron | 45.0% |
!! | TGTAACTTGGGTTGGTGCAT+TGG | - | chr6.4:51570193-51570212 | MS.gene05158:intron | 45.0% |
!! | TTGCAAGGTTTGCTGAAGCT+TGG | - | chr6.4:51572534-51572553 | MS.gene05158:intron | 45.0% |
!!! | CGGTGCTGCGTAATTTTGAA+TGG | - | chr6.4:51571236-51571255 | MS.gene05158:intron | 45.0% |
!!! | GCTGGCATTTTTTCCATTGG+AGG | - | chr6.4:51572596-51572615 | MS.gene05158:CDS | 45.0% |
ACCACTGCCCCCAATTACAA+AGG | + | chr6.4:51570775-51570794 | None:intergenic | 50.0% | |
ACCTTTGTAATTGGGGGCAG+TGG | - | chr6.4:51570771-51570790 | MS.gene05158:intron | 50.0% | |
CAGGCAATTGGCAGAATCAG+GGG | - | chr6.4:51571796-51571815 | MS.gene05158:intron | 50.0% | |
CGCCAGTTATGACTGACAGA+AGG | + | chr6.4:51573536-51573555 | None:intergenic | 50.0% | |
GACTAGGAGAGCCCCTAATA+AGG | + | chr6.4:51572957-51572976 | None:intergenic | 50.0% | |
GCAGGCAATTGGCAGAATCA+GGG | - | chr6.4:51571795-51571814 | MS.gene05158:intron | 50.0% | |
GGGTATGGCACTCAATGTTG+AGG | - | chr6.4:51571904-51571923 | MS.gene05158:intron | 50.0% | |
TGCAGGCAATTGGCAGAATC+AGG | - | chr6.4:51571794-51571813 | MS.gene05158:intron | 50.0% | |
TGGCTGTGAGGAACACAAAG+CGG | - | chr6.4:51571831-51571850 | MS.gene05158:intron | 50.0% | |
! | ACCACCTATAGCCGGTTTAG+GGG | - | chr6.4:51570539-51570558 | MS.gene05158:intron | 50.0% |
! | ACTGGTTCCACTAGTGGCAT+TGG | - | chr6.4:51569790-51569809 | MS.gene05158:CDS | 50.0% |
! | CAGACTCAATCTGCCACTTC+TGG | + | chr6.4:51571871-51571890 | None:intergenic | 50.0% |
! | GCCGTGGAGAAGTTTCTAGA+AGG | - | chr6.4:51575359-51575378 | MS.gene05158:CDS | 50.0% |
!! | TTGGCTTGTCTAGGTGATGG+AGG | - | chr6.4:51572487-51572506 | MS.gene05158:intron | 50.0% |
AACTTCTCCACGGCATCCGA+AGG | + | chr6.4:51575353-51575372 | None:intergenic | 55.0% | |
AAGCGACTACCTGCTGAAGC+CGG | - | chr6.4:51574179-51574198 | MS.gene05158:intron | 55.0% | |
CACACACAGTAGCGAGACAG+AGG | - | chr6.4:51571065-51571084 | MS.gene05158:intron | 55.0% | |
CACTATCACGCGTCGGATGT+CGG | - | chr6.4:51573565-51573584 | MS.gene05158:intron | 55.0% | |
CAGCTGTACTTGTTCGACCC+AGG | + | chr6.4:51574286-51574305 | None:intergenic | 55.0% | |
CCAACACTCTCCCCCTAAAC+CGG | + | chr6.4:51570553-51570572 | None:intergenic | 55.0% | |
GGAGAGCCCCTAATAAGGGA+TGG | + | chr6.4:51572952-51572971 | None:intergenic | 55.0% | |
GGCTGTGAGGAACACAAAGC+GGG | - | chr6.4:51571832-51571851 | MS.gene05158:intron | 55.0% | |
GTCTAGAGGGATCCGTGAGA+AGG | + | chr6.4:51572014-51572033 | None:intergenic | 55.0% | |
TAGCAGCAGCAACAGGACAG+TGG | - | chr6.4:51573809-51573828 | MS.gene05158:intron | 55.0% | |
TCTCCCCCTAAACCGGCTAT+AGG | + | chr6.4:51570546-51570565 | None:intergenic | 55.0% | |
TGCCAGACACTATCACGCGT+CGG | - | chr6.4:51573558-51573577 | MS.gene05158:intron | 55.0% | |
! | ATCCGACGCGTGATAGTGTC+TGG | + | chr6.4:51573563-51573582 | None:intergenic | 55.0% |
! | CCACCTATAGCCGGTTTAGG+GGG | - | chr6.4:51570540-51570559 | MS.gene05158:intron | 55.0% |
!! | ACACTGATACCGGCTTCAGC+AGG | + | chr6.4:51574191-51574210 | None:intergenic | 55.0% |
CCCCCTAAACCGGCTATAGG+TGG | + | chr6.4:51570543-51570562 | None:intergenic | 60.0% | |
TGGTCTTCCTTCGGATGCCG+TGG | - | chr6.4:51575343-51575362 | MS.gene05158:intron | 60.0% | |
! | CCGGTTTAGGGGGAGAGTGT+TGG | - | chr6.4:51570550-51570569 | MS.gene05158:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 51569751 | 51575421 | 51569751 | ID=MS.gene05158 |
chr6.4 | mRNA | 51569751 | 51575421 | 51569751 | ID=MS.gene05158.t1;Parent=MS.gene05158 |
chr6.4 | exon | 51575345 | 51575421 | 51575345 | ID=MS.gene05158.t1.exon1;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51575345 | 51575421 | 51575345 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51573247 | 51573373 | 51573247 | ID=MS.gene05158.t1.exon2;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51573247 | 51573373 | 51573247 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51572555 | 51572672 | 51572555 | ID=MS.gene05158.t1.exon3;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51572555 | 51572672 | 51572555 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51572173 | 51572309 | 51572173 | ID=MS.gene05158.t1.exon4;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51572173 | 51572309 | 51572173 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51571951 | 51572052 | 51571951 | ID=MS.gene05158.t1.exon5;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51571951 | 51572052 | 51571951 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51570925 | 51571017 | 51570925 | ID=MS.gene05158.t1.exon6;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51570925 | 51571017 | 51570925 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51570478 | 51570550 | 51570478 | ID=MS.gene05158.t1.exon7;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51570478 | 51570550 | 51570478 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
chr6.4 | exon | 51569751 | 51570013 | 51569751 | ID=MS.gene05158.t1.exon8;Parent=MS.gene05158.t1 |
chr6.4 | CDS | 51569751 | 51570013 | 51569751 | ID=cds.MS.gene05158.t1;Parent=MS.gene05158.t1 |
Gene Sequence |
Protein sequence |