AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55839

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55839.t1 MTR_8g099995 98.516 337 5 0 1 337 1 337 0.0 687
MS.gene55839.t1 MTR_3g077410 53.846 325 146 2 1 323 1 323 2.69e-123 357
MS.gene55839.t1 MTR_4g105310 54.114 316 141 2 1 314 12 325 4.77e-121 352
MS.gene55839.t1 MTR_7g099850 49.085 328 162 4 1 327 1 324 3.35e-100 298
MS.gene55839.t1 MTR_1g068970 48.788 330 159 5 1 327 1 323 9.98e-99 295
MS.gene55839.t1 MTR_4g105310 53.516 256 115 2 1 254 12 265 3.27e-93 278
MS.gene55839.t1 MTR_8g098415 45.714 315 167 3 7 321 2 312 4.00e-92 277
MS.gene55839.t1 MTR_8g098415 45.981 311 164 3 7 317 2 308 9.03e-91 274
MS.gene55839.t1 MTR_1g100315 45.955 309 163 3 13 321 8 312 4.59e-86 262
MS.gene55839.t1 MTR_1g100395 44.373 311 169 3 13 323 8 314 3.34e-85 260
MS.gene55839.t1 MTR_1g100305 43.934 305 167 3 13 317 8 308 4.89e-82 252
MS.gene55839.t1 MTR_6g053550 45.484 310 164 3 14 321 17 323 1.59e-81 251
MS.gene55839.t1 MTR_1g100335 44.013 309 169 3 13 321 8 312 4.00e-81 249
MS.gene55839.t1 MTR_1g068970 46.183 262 132 4 69 327 1 256 3.02e-72 224
MS.gene55839.t1 MTR_8g098415 43.701 254 140 2 64 317 1 251 1.15e-68 216
MS.gene55839.t1 MTR_1g100335 47.458 236 121 2 13 248 8 240 4.55e-65 206
MS.gene55839.t1 MTR_1g100335 45.968 248 131 2 13 260 8 252 9.45e-65 206
MS.gene55839.t1 MTR_8g098415 50.000 220 107 2 7 226 2 218 2.05e-64 203
MS.gene55839.t1 MTR_6g053600 44.151 265 143 3 15 277 4 265 5.86e-64 205
MS.gene55839.t1 MTR_6g081020 28.896 308 191 7 33 321 59 357 3.43e-25 104
MS.gene55839.t1 MTR_6g041980 29.091 275 177 8 39 312 70 327 8.36e-24 100
MS.gene55839.t1 MTR_3g009190 28.477 302 195 7 39 325 66 361 3.47e-23 99.0
MS.gene55839.t1 MTR_3g009190 28.477 302 195 7 39 325 84 379 4.35e-23 99.0
MS.gene55839.t1 MTR_6g453040 28.428 299 193 7 39 322 44 336 1.23e-22 97.1
MS.gene55839.t1 MTR_2g079710 28.391 317 195 10 33 321 84 396 2.43e-21 94.4
MS.gene55839.t1 MTR_3g009190 27.815 302 197 7 39 325 65 360 7.38e-21 92.4
MS.gene55839.t1 MTR_3g091070 27.723 303 178 9 39 325 44 321 8.69e-21 91.7
MS.gene55839.t1 MTR_6g041980 30.055 183 119 3 39 221 70 243 3.99e-20 89.0
MS.gene55839.t1 MTR_8g022500 42.342 111 39 1 40 150 431 516 7.70e-17 81.6
MS.gene55839.t1 MTR_6g453040 29.648 199 127 3 38 227 65 259 2.32e-15 75.9
MS.gene55839.t1 MTR_3g098470 27.575 301 148 14 38 297 37 308 9.42e-14 71.2
MS.gene55839.t1 MTR_6g453040 31.973 147 90 2 39 179 66 208 1.14e-13 70.1
MS.gene55839.t1 MTR_4g087460 26.374 273 169 7 34 274 20 292 2.22e-12 67.4
MS.gene55839.t1 MTR_3g085740 28.405 257 134 10 23 269 65 281 9.38e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55839.t1 AT4G24050 73.636 330 86 1 1 330 1 329 0.0 512
MS.gene55839.t1 AT1G64590 72.755 323 85 2 1 322 1 321 2.88e-159 449
MS.gene55839.t1 AT4G24050 74.007 277 69 2 1 277 1 274 2.23e-150 424
MS.gene55839.t1 AT5G50130 54.462 325 140 3 1 321 1 321 3.56e-119 347
MS.gene55839.t1 AT5G50130 53.901 282 129 1 40 321 8 288 1.52e-104 309
MS.gene55839.t1 AT5G50130 54.225 284 124 2 40 321 8 287 1.61e-104 309
MS.gene55839.t1 AT5G50130 54.610 282 119 4 1 277 1 278 4.25e-103 306
MS.gene55839.t1 AT5G50130 54.930 284 114 5 1 277 1 277 6.02e-103 305
MS.gene55839.t1 AT2G37540 48.726 314 157 3 8 321 7 316 8.47e-97 290
MS.gene55839.t1 AT5G50130 55.039 258 108 3 1 254 1 254 1.57e-95 284
MS.gene55839.t1 AT5G50130 55.385 260 103 4 1 254 1 253 2.92e-95 283
MS.gene55839.t1 AT5G02540 49.390 328 155 5 8 330 7 328 3.60e-92 278
MS.gene55839.t1 AT4G23430 45.338 311 167 2 7 317 2 309 6.64e-89 270
MS.gene55839.t1 AT5G50130 53.975 239 108 2 40 277 8 245 1.27e-88 268
MS.gene55839.t1 AT5G50130 54.357 241 103 3 40 277 8 244 2.55e-88 267
MS.gene55839.t1 AT4G23420 44.695 311 169 2 7 317 2 309 1.85e-87 266
MS.gene55839.t1 AT4G23420 44.695 311 169 2 7 317 2 309 1.85e-87 266
MS.gene55839.t1 AT4G23430 45.048 313 163 3 7 317 2 307 6.14e-86 262
MS.gene55839.t1 AT4G23420 44.884 303 164 2 15 317 27 326 1.48e-84 259
MS.gene55839.t1 AT4G11410 43.607 305 168 3 13 317 8 308 4.53e-82 252
MS.gene55839.t1 AT4G23430 42.765 311 165 3 7 317 2 299 2.11e-78 242
MS.gene55839.t1 AT4G23430 42.492 313 161 4 7 317 2 297 1.37e-75 235
MS.gene55839.t1 AT2G37540 50.000 240 117 2 8 247 7 243 2.10e-74 230
MS.gene55839.t1 AT4G23420 45.076 264 142 2 7 270 2 262 3.60e-72 225
MS.gene55839.t1 AT4G23420 47.280 239 123 2 7 245 2 237 1.20e-68 216
MS.gene55839.t1 AT4G11410 45.532 235 125 2 13 247 8 239 5.20e-65 206
MS.gene55839.t1 AT5G53100 33.333 303 171 8 33 314 42 334 4.08e-30 118
MS.gene55839.t1 AT5G53090 31.438 299 179 7 33 314 54 343 1.42e-29 117
MS.gene55839.t1 AT4G27760 30.435 299 182 7 33 314 55 344 4.19e-27 110
MS.gene55839.t1 AT5G04070 29.667 300 188 8 39 323 62 353 5.70e-25 103
MS.gene55839.t1 AT5G15940 29.762 336 203 11 17 336 41 359 1.67e-24 102
MS.gene55839.t1 AT5G15940 29.762 336 203 11 17 336 41 359 1.67e-24 102
MS.gene55839.t1 AT5G15940 29.762 336 203 11 17 336 40 358 1.68e-24 102
MS.gene55839.t1 AT1G03630 31.429 315 185 11 34 321 86 396 3.33e-24 102
MS.gene55839.t1 AT5G15940 32.443 262 158 8 17 265 41 296 3.56e-24 100
MS.gene55839.t1 AT1G03630 31.429 315 185 11 34 321 88 398 3.68e-24 102
MS.gene55839.t1 AT5G54190 28.302 318 194 11 33 321 90 402 4.85e-24 102
MS.gene55839.t1 AT4G09750 27.972 286 185 8 15 297 23 290 1.32e-23 99.8
MS.gene55839.t1 AT4G27440 28.707 317 194 10 33 321 86 398 7.75e-23 98.6
MS.gene55839.t1 AT4G27440 28.707 317 194 10 33 321 86 398 7.75e-23 98.6

Find 99 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTTGCCACTAATTATTT+AGG 0.203045 4.3:-4103613 MS.gene55839:intron
CGAAACCTCAACTTCCAAAT+TGG 0.217272 4.3:-4098462 MS.gene55839:CDS
GCAATACACGGTTGGTTTAC+TGG 0.224176 4.3:-4103410 MS.gene55839:CDS
TTCCGAATTAATGATTTCTA+AGG 0.232240 4.3:-4098402 MS.gene55839:CDS
AAAATTCAAGGTTATTAATT+AGG 0.234521 4.3:+4098360 None:intergenic
GACTTGTTCGGCGGTGGATT+TGG 0.246150 4.3:+4104272 None:intergenic
GAGCGTGAAGGCTTTCTTAC+AGG 0.265658 4.3:-4101722 MS.gene55839:intron
TCGGCTGGTCCAAGCGGTTT+TGG 0.276106 4.3:-4104297 MS.gene55839:CDS
AGTTATGTTGGATCCCAATT+TGG 0.277606 4.3:+4098448 None:intergenic
TGGCGACGTCATCTCCTATT+TGG 0.287781 4.3:-4103390 MS.gene55839:CDS
ATTAGGTCAAAGGCAGCTTT+TGG 0.292856 4.3:+4098377 None:intergenic
TAACTGAAGCTTCAAGGTTA+TGG 0.301474 4.3:-4098430 MS.gene55839:CDS
GTGGAAAACGTTGGCGAGTT+TGG 0.312144 4.3:+4102172 None:intergenic
ACCCTTAGAAATCATTAATT+CGG 0.316889 4.3:+4098400 None:intergenic
GACTGTGAACTGCGTTCATC+CGG 0.337210 4.3:-4101771 MS.gene55839:CDS
ACGGAGATCGCCGCAGGTTT+CGG 0.369374 4.3:+4104248 None:intergenic
GCGGCATATATGAGCCAAAT+AGG 0.369833 4.3:+4103376 None:intergenic
CCAATAAACTTCAAAATTCA+AGG 0.382716 4.3:+4098348 None:intergenic
TCCATCACCGCCATCATAAC+AGG 0.393753 4.3:-4104225 MS.gene55839:CDS
AACTGAAGCTTCAAGGTTAT+GGG 0.397578 4.3:-4098429 MS.gene55839:CDS
TTCACGCTCTCTGGTGAGTC+TGG 0.403631 4.3:+4101736 None:intergenic
CCGGACACATTGACGAGCCT+TGG 0.405233 4.3:+4098506 None:intergenic
CCTTGAAGCTTCAGTTATGT+TGG 0.418462 4.3:+4098436 None:intergenic
AAGAAAGCCTTCACGCTCTC+TGG 0.426194 4.3:+4101727 None:intergenic
GCAGGTTTCGGTGACTTGTT+CGG 0.429594 4.3:+4104260 None:intergenic
CTCATATATGCCGCAACAAA+AGG 0.429884 4.3:-4103367 MS.gene55839:intron
GAAACGGTTAAATACCTAAT+CGG 0.430694 4.3:-4104321 MS.gene55839:CDS
TTACTCACCTAAATAATTAG+TGG 0.432077 4.3:+4103606 None:intergenic
TTCGGTGACTTGTTCGGCGG+TGG 0.432304 4.3:+4104266 None:intergenic
TTGGACCAGCCGATCCGATT+AGG 0.439518 4.3:+4104307 None:intergenic
GGGAATGGTCTTTAAGAGCT+TGG 0.440263 4.3:+4101560 None:intergenic
GTTGAAACGGCAAAGGAGAC+AGG 0.443768 4.3:-4103464 MS.gene55839:CDS
CCAACATAACTGAAGCTTCA+AGG 0.448430 4.3:-4098436 MS.gene55839:CDS
ACTGTGAACTGCGTTCATCC+GGG 0.463347 4.3:-4101770 MS.gene55839:CDS
ATAACTATAATCTCCGCTTC+AGG 0.466241 4.3:+4104078 None:intergenic
CGGACACATTGACGAGCCTT+GGG 0.466870 4.3:+4098507 None:intergenic
ATCATAACAGGTGGTACGTC+AGG 0.468933 4.3:-4104213 MS.gene55839:CDS
CCAAGGCTCGTCAATGTGTC+CGG 0.474558 4.3:-4098506 MS.gene55839:CDS
AGAAATCATTAATTCGGAAA+CGG 0.477259 4.3:+4098406 None:intergenic
GAAACCTCAACTTCCAAATT+GGG 0.478402 4.3:-4098461 MS.gene55839:CDS
AGCGGAAACGGCGCGTGTGT+TGG 0.478909 4.3:-4104184 MS.gene55839:CDS
ACAGGTGGTACGTCAGGAAT+CGG 0.485726 4.3:-4104207 MS.gene55839:CDS
CGCGTGTGTTGGCGAAGAGA+GGG 0.487691 4.3:-4104173 MS.gene55839:CDS
GCAGTCAGCAAAGTACTTGC+CGG 0.493686 4.3:+4098487 None:intergenic
GTCAGGAATCGGAGCGGAAA+CGG 0.496545 4.3:-4104196 MS.gene55839:CDS
TGAAGCGGAGATTATAGTTA+TGG 0.500400 4.3:-4104076 MS.gene55839:CDS
GGATCCCAATTTGGAAGTTG+AGG 0.503982 4.3:+4098457 None:intergenic
AAGGTTATTAATTAGGTCAA+AGG 0.505043 4.3:+4098367 None:intergenic
ACCTGTTATGATGGCGGTGA+TGG 0.505842 4.3:+4104224 None:intergenic
GATGGAACGGAGATCGCCGC+AGG 0.516652 4.3:+4104242 None:intergenic
GCGCGTGTGTTGGCGAAGAG+AGG 0.525349 4.3:-4104174 MS.gene55839:CDS
TGACGTACCACCTGTTATGA+TGG 0.526556 4.3:+4104215 None:intergenic
AGTCTGGTTCTCACGACCCC+CGG 0.529567 4.3:+4101752 None:intergenic
TATTGTATTTACCTGGGGAA+TGG 0.530601 4.3:+4101545 None:intergenic
TCCGAATTAATGATTTCTAA+GGG 0.531554 4.3:-4098401 MS.gene55839:CDS
ATTTCACAAGATGCTTGAAA+CGG 0.543773 4.3:-4104337 None:intergenic
CTGTGAACTGCGTTCATCCG+GGG 0.545350 4.3:-4101769 MS.gene55839:CDS
ACCTAAATAATTAGTGGCAA+AGG 0.552038 4.3:+4103612 None:intergenic
TGTTGGCGAAGAGAGGGGCG+AGG 0.552443 4.3:-4104167 MS.gene55839:CDS
GATTTGGATCCAAAACCGCT+TGG 0.553143 4.3:+4104288 None:intergenic
AAATACCTAATCGGATCGGC+TGG 0.556895 4.3:-4104312 MS.gene55839:CDS
GCTCTTAAAGACCATTCCCC+AGG 0.566840 4.3:-4101556 MS.gene55839:intron
GCAAAGGAGACAGGGATACA+AGG 0.572206 4.3:-4103455 MS.gene55839:CDS
CTGTTGACTAGAAACAATGC+TGG 0.579851 4.3:-4103682 MS.gene55839:intron
CGAGCTTTCTCGCAGACTCA+AGG 0.580007 4.3:-4102144 MS.gene55839:intron
GAGCACGCAATCTCTGAGGA+TGG 0.582321 4.3:-4103646 MS.gene55839:CDS
AGCTGCAACAACATGTTATG+TGG 0.584192 4.3:-4098537 MS.gene55839:CDS
TGCGAGAAAGCTCGTTAGTG+TGG 0.589054 4.3:+4102153 None:intergenic
GATGAAGAAGATGGTTGAAA+CGG 0.596299 4.3:-4103477 MS.gene55839:CDS
ACATACATGAGGAGATTGAG+AGG 0.597540 4.3:+4103988 None:intergenic
GTTGGCGAAGAGAGGGGCGA+GGG 0.600330 4.3:-4104166 MS.gene55839:CDS
GTGAAAACGAGTAACGAAGT+TGG 0.605876 4.3:+4104023 None:intergenic
GCGTGTGTTGGCGAAGAGAG+GGG 0.611397 4.3:-4104172 MS.gene55839:CDS
AACGTGTCGTCCGCAATACA+CGG 0.612162 4.3:-4103422 MS.gene55839:CDS
TGTGAACTGCGTTCATCCGG+GGG 0.618545 4.3:-4101768 MS.gene55839:CDS
TGTCGTCCGCAATACACGGT+TGG 0.620494 4.3:-4103418 MS.gene55839:CDS
AACAAGAGGAAGAATAGTGA+CGG 0.621467 4.3:-4104106 MS.gene55839:CDS
GAAGATGGTTGAAACGGCAA+AGG 0.624723 4.3:-4103471 MS.gene55839:CDS
CTCGTTAGTGTGGAAAACGT+TGG 0.627285 4.3:+4102163 None:intergenic
TTGAAACGGCAAAGGAGACA+GGG 0.627738 4.3:-4103463 MS.gene55839:CDS
GAGATTGAGAGGGAAACCGA+TGG 0.630117 4.3:+4103999 None:intergenic
AGGAGACAGGGATACAAGGA+AGG 0.631549 4.3:-4103451 MS.gene55839:CDS
ATCGGATCGGCTGGTCCAAG+CGG 0.634484 4.3:-4104303 MS.gene55839:CDS
TTATGATGGCGGTGATGGAA+CGG 0.635306 4.3:+4104229 None:intergenic
CATACATGAGGAGATTGAGA+GGG 0.645624 4.3:+4103989 None:intergenic
GTTATGTGGCAACTCACCCA+AGG 0.646322 4.3:-4098523 MS.gene55839:CDS
GGAAAGAGCATAAGCACGTG+TGG 0.646988 4.3:+4102193 None:intergenic
AGTGACGGAGTGTCCTGAAG+CGG 0.658575 4.3:-4104091 MS.gene55839:CDS
TGTTGACTAGAAACAATGCT+GGG 0.670168 4.3:-4103681 MS.gene55839:intron
GGTTAAATACCTAATCGGAT+CGG 0.671311 4.3:-4104316 MS.gene55839:CDS
GAACAAGTCACCGAAACCTG+CGG 0.682551 4.3:-4104258 MS.gene55839:CDS
AACGCAGTTCACAGTCACGT+TGG 0.685771 4.3:+4101778 None:intergenic
AGTAAACCAACCGTGTATTG+CGG 0.688794 4.3:+4103412 None:intergenic
ATCACCGCCATCATAACAGG+TGG 0.694207 4.3:-4104222 MS.gene55839:CDS
GGTTTCGGTGACTTGTTCGG+CGG 0.695585 4.3:+4104263 None:intergenic
AGAAGAGCACGCAATCTCTG+AGG 0.699359 4.3:-4103650 MS.gene55839:CDS
AGACTCACCAGAGAGCGTGA+AGG 0.708096 4.3:-4101734 MS.gene55839:CDS
CGTACCACCTGTTATGATGG+CGG 0.715495 4.3:+4104218 None:intergenic
TGGTACGTCAGGAATCGGAG+CGG 0.757116 4.3:-4104202 MS.gene55839:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGGAAAATTAAAAA+AGG + chr4.3:4102381-4102400 None:intergenic 10.0%
!! AAAATACTAGTAAATAATTT+GGG - chr4.3:4100857-4100876 MS.gene55839:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr4.3:4099518-4099537 None:intergenic 10.0%
!! ATAAAATAAACTATATAAAC+TGG + chr4.3:4100815-4100834 None:intergenic 10.0%
!! CAAATTCAAATAAATAAATA+TGG + chr4.3:4098974-4098993 None:intergenic 10.0%
!! GATAAATAAATAAATAAAAC+TGG - chr4.3:4103013-4103032 MS.gene55839:intron 10.0%
!! TAAAATACTAGTAAATAATT+TGG - chr4.3:4100856-4100875 MS.gene55839:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr4.3:4099519-4099538 None:intergenic 10.0%
!! TTGATAAAAAAATATATTTG+AGG - chr4.3:4099993-4100012 MS.gene55839:intron 10.0%
!!! ATAATTTTATAAAAAAGTCA+AGG + chr4.3:4100139-4100158 None:intergenic 10.0%
!!! ATATATTTTTGTTATTTGAT+GGG - chr4.3:4099123-4099142 MS.gene55839:intron 10.0%
!!! GAATTTTAATTAACTTTAAT+TGG - chr4.3:4103685-4103704 MS.gene55839:intron 10.0%
!!! GATAATACAAAATTTTAAAA+GGG - chr4.3:4103206-4103225 MS.gene55839:intron 10.0%
!!! TATATATTTTTGTTATTTGA+TGG - chr4.3:4099122-4099141 MS.gene55839:intron 10.0%
!!! TTTTATTGAACATAAAATAA+GGG + chr4.3:4103847-4103866 None:intergenic 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG - chr4.3:4102571-4102590 MS.gene55839:intron 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG + chr4.3:4102590-4102571 None:intergenic 10.0%
!!! TTTTTATTGAACATAAAATA+AGG + chr4.3:4103848-4103867 None:intergenic 10.0%
!! AAAATTCAAGGTTATTAATT+AGG + chr4.3:4104328-4104347 None:intergenic 15.0%
!! AAATACTAGTAAATAATTTG+GGG - chr4.3:4100858-4100877 MS.gene55839:intron 15.0%
!! AATATATTTGAGGATTAAAT+TGG - chr4.3:4100003-4100022 MS.gene55839:intron 15.0%
!! AATTAATCAAAATTAACTAC+TGG - chr4.3:4103635-4103654 MS.gene55839:CDS 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr4.3:4099453-4099472 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr4.3:4099517-4099536 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr4.3:4099454-4099473 None:intergenic 15.0%
!! TGGAGAAATTAAAAAAAAAA+TGG + chr4.3:4102395-4102414 None:intergenic 15.0%
!! TTTATTTGAATTTGAATGAT+TGG - chr4.3:4098980-4098999 MS.gene55839:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - chr4.3:4102572-4102591 MS.gene55839:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG + chr4.3:4102591-4102572 None:intergenic 15.0%
!!! AAAATTCTGAAATCAATTAA+CGG + chr4.3:4101057-4101076 None:intergenic 15.0%
!!! AAATAAGATGTATAGATTTT+AGG - chr4.3:4101285-4101304 MS.gene55839:intron 15.0%
!!! AATTTTTTTTTTTGGACAAA+AGG + chr4.3:4099803-4099822 None:intergenic 15.0%
!!! ACAAATTTCACTTTTAAATA+TGG + chr4.3:4100710-4100729 None:intergenic 15.0%
!!! AGAAATTGATGATAATTTTT+TGG - chr4.3:4102218-4102237 MS.gene55839:intron 15.0%
!!! AGTTAATTTTGATTAATTGA+TGG + chr4.3:4103633-4103652 None:intergenic 15.0%
!!! ATTTGATTTTAGAATAGAAA+AGG + chr4.3:4101080-4101099 None:intergenic 15.0%
!!! CAAAAGGTAATTTTTTTTTT+TGG + chr4.3:4099811-4099830 None:intergenic 15.0%
!!! GGATAATACAAAATTTTAAA+AGG - chr4.3:4103205-4103224 MS.gene55839:intron 15.0%
!!! GTTAATTTTGATTAATTGAT+GGG + chr4.3:4103632-4103651 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - chr4.3:4102570-4102589 MS.gene55839:intron 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG + chr4.3:4102589-4102570 None:intergenic 15.0%
!!! TCATCTATTGAAATTTTTTT+TGG - chr4.3:4102754-4102773 MS.gene55839:intron 15.0%
!!! TCATTTATAAAGTTTTTTCT+AGG - chr4.3:4103578-4103597 MS.gene55839:intron 15.0%
!!! TGATGACAAATATATTTTAT+AGG - chr4.3:4103955-4103974 MS.gene55839:intron 15.0%
!! AAAAATAAATAATATCCACG+TGG - chr4.3:4102450-4102469 MS.gene55839:intron 20.0%
!! AAAAATAAATAATATCCACG+TGG + chr4.3:4102469-4102450 None:intergenic 20.0%
!! AAAACACAACAACAAATTAA+TGG + chr4.3:4104081-4104100 None:intergenic 20.0%
!! AATAAATATTCATGAGTAGA+AGG - chr4.3:4103394-4103413 MS.gene55839:CDS 20.0%
!! AGAATAAGAAAAGAAAATGT+TGG + chr4.3:4102729-4102748 None:intergenic 20.0%
!! GTTAAAAATAATAAACAGAG+TGG + chr4.3:4103105-4103124 None:intergenic 20.0%
!! TATAAGCTTGTGTAATTTAA+TGG - chr4.3:4103450-4103469 MS.gene55839:CDS 20.0%
!! TATAAGTGTAAGTAACATAA+AGG - chr4.3:4103277-4103296 MS.gene55839:intron 20.0%
!! TATATACATATACATACATG+AGG + chr4.3:4098711-4098730 None:intergenic 20.0%
!! TATTCACATTGTTATAAAGA+AGG - chr4.3:4099687-4099706 MS.gene55839:intron 20.0%
!! TTAAAGAAATGAAGACAAAT+CGG + chr4.3:4101927-4101946 None:intergenic 20.0%
!! TTCAAGAATATCTTATATGT+GGG + chr4.3:4103880-4103899 None:intergenic 20.0%
!! TTCATTATAATTTCATGTGT+TGG - chr4.3:4098805-4098824 MS.gene55839:intron 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - chr4.3:4102573-4102592 MS.gene55839:intron 20.0%
!! TTTATTTGTACACATAATGA+TGG - chr4.3:4103184-4103203 MS.gene55839:intron 20.0%
!! TTTCAAGAATATCTTATATG+TGG + chr4.3:4103881-4103900 None:intergenic 20.0%
!!! ATCTATTCATTCATCTTTTA+TGG - chr4.3:4100586-4100605 MS.gene55839:intron 20.0%
!!! ATTTTTTTTTAAAAGCTTGC+TGG + chr4.3:4102429-4102448 None:intergenic 20.0%
!!! CTTCATTTCTTTAATTTTCA+AGG - chr4.3:4101933-4101952 MS.gene55839:intron 20.0%
!!! CTTGATTTAATTTGAGATTT+TGG + chr4.3:4103142-4103161 None:intergenic 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + chr4.3:4099384-4099403 None:intergenic 20.0%
!!! TATACATCTTATTTGATCAA+TGG + chr4.3:4101279-4101298 None:intergenic 20.0%
!!! TATTTTTTTTAAAAGCTTGC+TGG - chr4.3:4101501-4101520 MS.gene55839:intron 20.0%
!!! TTTCACTTTTAAATATGGAT+AGG + chr4.3:4100705-4100724 None:intergenic 20.0%
! AAGGTAAATTCTTAGATAGT+TGG + chr4.3:4099784-4099803 None:intergenic 25.0%
! AAGGTTATTAATTAGGTCAA+AGG + chr4.3:4104321-4104340 None:intergenic 25.0%
! AATATGTGTAATCAATGCAT+CGG - chr4.3:4100103-4100122 MS.gene55839:intron 25.0%
! AATTGAGATCTGAAAAACAA+TGG - chr4.3:4103231-4103250 MS.gene55839:intron 25.0%
! AATTGGCTATCATAAAACAA+AGG - chr4.3:4100020-4100039 MS.gene55839:intron 25.0%
! ACCCTTAGAAATCATTAATT+CGG + chr4.3:4104288-4104307 None:intergenic 25.0%
! ACTACAAACACATTCATAAA+TGG + chr4.3:4100259-4100278 None:intergenic 25.0%
! AGAAATCATTAATTCGGAAA+CGG + chr4.3:4104282-4104301 None:intergenic 25.0%
! AGGTAAATTCTTAGATAGTT+GGG + chr4.3:4099783-4099802 None:intergenic 25.0%
! ATAGTGTATTGTATTTACCT+GGG + chr4.3:4101149-4101168 None:intergenic 25.0%
! ATTAATTAATATTGTGGTGC+AGG - chr4.3:4099161-4099180 MS.gene55839:intron 25.0%
! ATTGGCTATCATAAAACAAA+GGG - chr4.3:4100021-4100040 MS.gene55839:intron 25.0%
! CATGATAAGTTACCATTTAA+AGG + chr4.3:4100081-4100100 None:intergenic 25.0%
! CCTGTATATAAGTTTATTTG+CGG + chr4.3:4104127-4104146 None:intergenic 25.0%
! CTTAACCAAAATTTCATTCA+AGG + chr4.3:4099629-4099648 None:intergenic 25.0%
! TATAGTGTATTGTATTTACC+TGG + chr4.3:4101150-4101169 None:intergenic 25.0%
! TATTAAATATGTGCAGGAAA+TGG - chr4.3:4100881-4100900 MS.gene55839:intron 25.0%
! TCCGAATTAATGATTTCTAA+GGG - chr4.3:4104284-4104303 MS.gene55839:CDS 25.0%
! TTACTCACCTAAATAATTAG+TGG + chr4.3:4099082-4099101 None:intergenic 25.0%
! TTATTATTACGAGAAGAGAA+TGG + chr4.3:4103778-4103797 None:intergenic 25.0%
! TTCAAATTGTTTGTGAGTTA+TGG + chr4.3:4102894-4102913 None:intergenic 25.0%
! TTCCGAATTAATGATTTCTA+AGG - chr4.3:4104283-4104302 MS.gene55839:CDS 25.0%
! TTGTTTGATGTTGTATAGAT+CGG - chr4.3:4101956-4101975 MS.gene55839:intron 25.0%
!! AAAAATGTTGATGAAGAAGA+TGG - chr4.3:4099199-4099218 MS.gene55839:intron 25.0%
!! GATCAATGGTTTAAGTTAAT+TGG + chr4.3:4101265-4101284 None:intergenic 25.0%
!! GTTTCTGTTTACTAATTTGT+TGG - chr4.3:4100424-4100443 MS.gene55839:intron 25.0%
!! TTACACCTTGAATGAAATTT+TGG - chr4.3:4099621-4099640 MS.gene55839:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + chr4.3:4099407-4099426 None:intergenic 25.0%
!! TTTAAGTTAATTGGTCAAGT+TGG + chr4.3:4101256-4101275 None:intergenic 25.0%
!!! AACAATAACACTCTTGTTTT+GGG - chr4.3:4100994-4101013 MS.gene55839:intron 25.0%
!!! AATTACCGACAATTTTTTAG+AGG + chr4.3:4103607-4103626 None:intergenic 25.0%
!!! CATCATTTTCATTTCAAGTA+CGG + chr4.3:4100361-4100380 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + chr4.3:4099385-4099404 None:intergenic 25.0%
!!! GGTTCAAATATTGTTTTGAA+GGG + chr4.3:4103757-4103776 None:intergenic 25.0%
!!! GTTCAAATATTGTTTTGAAG+GGG + chr4.3:4103756-4103775 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + chr4.3:4099406-4099425 None:intergenic 25.0%
!!! TGGTTCAAATATTGTTTTGA+AGG + chr4.3:4103758-4103777 None:intergenic 25.0%
!!! TGTTTTTGATCCATATTTTG+AGG - chr4.3:4102335-4102354 MS.gene55839:intron 25.0%
AAAAGGACATCATGAATTTG+CGG + chr4.3:4102364-4102383 None:intergenic 30.0%
AATATGGACCAATACATGTA+TGG - chr4.3:4103489-4103508 MS.gene55839:CDS 30.0%
AATCTAACAGAAGAGAAGAA+AGG + chr4.3:4102008-4102027 None:intergenic 30.0%
AATGTTCTCTATTTGTGCAT+GGG - chr4.3:4101197-4101216 MS.gene55839:intron 30.0%
AATTATAGCAAATGAAGTCG+TGG + chr4.3:4100761-4100780 None:intergenic 30.0%
ACAACATGCGAATACATTAT+TGG - chr4.3:4104011-4104030 MS.gene55839:CDS 30.0%
ACCTAAATAATTAGTGGCAA+AGG + chr4.3:4099076-4099095 None:intergenic 30.0%
ACCTTTGCCACTAATTATTT+AGG - chr4.3:4099072-4099091 MS.gene55839:intron 30.0%
ATAAATCTCGACACTTCTAA+TGG + chr4.3:4098876-4098895 None:intergenic 30.0%
ATATGGACCAATACATGTAT+GGG - chr4.3:4103490-4103509 MS.gene55839:CDS 30.0%
ATGGATGTAGAAAAAACCAA+TGG + chr4.3:4103065-4103084 None:intergenic 30.0%
ATTAAATCAAGCTTCAGTTG+TGG - chr4.3:4103151-4103170 MS.gene55839:intron 30.0%
ATTATAGCAAATGAAGTCGT+GGG + chr4.3:4100760-4100779 None:intergenic 30.0%
ATTTGGACCCATTGAAAAAT+TGG - chr4.3:4101229-4101248 MS.gene55839:intron 30.0%
CAAAATTGCAGGTTAACAAA+AGG + chr4.3:4099827-4099846 None:intergenic 30.0%
CAGGAAATTTGTATACAAAG+TGG - chr4.3:4103660-4103679 MS.gene55839:CDS 30.0%
CCGCAAATAAACTTATATAC+AGG - chr4.3:4104124-4104143 MS.gene55839:CDS 30.0%
GAAACGGTTAAATACCTAAT+CGG - chr4.3:4098364-4098383 MS.gene55839:CDS 30.0%
GAGAAATAATTAGCAAGAAC+AGG + chr4.3:4100793-4100812 None:intergenic 30.0%
GGACACAAAAATGATAAACA+TGG + chr4.3:4103084-4103103 None:intergenic 30.0%
GGTATATATACATACTCTTG+TGG + chr4.3:4099762-4099781 None:intergenic 30.0%
TAGTGTATTGTATTTACCTG+GGG + chr4.3:4101148-4101167 None:intergenic 30.0%
TCAAAATTAACTACTGGATC+AGG - chr4.3:4103641-4103660 MS.gene55839:CDS 30.0%
TCAGAAATCTTGATCCAATA+TGG - chr4.3:4103473-4103492 MS.gene55839:CDS 30.0%
TGCATGGGTAAAGTTTAATT+TGG - chr4.3:4101212-4101231 MS.gene55839:intron 30.0%
TGCCAAAGAATCAATACTTA+GGG - chr4.3:4102543-4102562 MS.gene55839:intron 30.0%
TGCCAAAGAATCAATACTTA+GGG + chr4.3:4102562-4102543 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr4.3:4099510-4099529 None:intergenic 30.0%
TTCTTCTCTTCTGTTAGATT+CGG - chr4.3:4102008-4102027 MS.gene55839:intron 30.0%
TTGTAGTTTCAATGCATTCA+AGG - chr4.3:4100272-4100291 MS.gene55839:intron 30.0%
TTGTATTTGAATGTTCTTGC+TGG - chr4.3:4102182-4102201 MS.gene55839:CDS 30.0%
! AGAAAAGAAAATGTTGGTGA+TGG + chr4.3:4102723-4102742 None:intergenic 30.0%
! AGTTATGGTTGTTGGTATTT+TGG + chr4.3:4102879-4102898 None:intergenic 30.0%
! ATAATTTCATGTGTTGGTGT+CGG - chr4.3:4098811-4098830 MS.gene55839:intron 30.0%
! ATACATGTATTGGTCCATAT+TGG + chr4.3:4103490-4103509 None:intergenic 30.0%
! ATCAGAACAAGCTAACTTTT+GGG + chr4.3:4102996-4103015 None:intergenic 30.0%
! CTTGCTGGCATTTTTAAATT+GGG - chr4.3:4101516-4101535 MS.gene55839:intron 30.0%
! CTTTTCAAAAGTTGTGGTTA+TGG + chr4.3:4102599-4102618 None:intergenic 30.0%
! GGTTACCTCTAAAAAATTGT+CGG - chr4.3:4103599-4103618 MS.gene55839:intron 30.0%
! GTTTTCTCCAACAATTCTTA+CGG - chr4.3:4103037-4103056 MS.gene55839:intron 30.0%
! TATCAGAACAAGCTAACTTT+TGG + chr4.3:4102997-4103016 None:intergenic 30.0%
! TGCAATTTTGCCAAAACTTT+GGG - chr4.3:4099837-4099856 MS.gene55839:intron 30.0%
! TTATTTGTCACCTTTTGTTG+CGG + chr4.3:4099331-4099350 None:intergenic 30.0%
! TTGCTGGCATTTTTAAATTG+GGG - chr4.3:4101517-4101536 MS.gene55839:intron 30.0%
! TTTAGGCTTAATTGCACTTT+TGG - chr4.3:4101302-4101321 MS.gene55839:intron 30.0%
!! AAGTTGGACCAATTTTTCAA+TGG + chr4.3:4101240-4101259 None:intergenic 30.0%
!! ACAACTTTTGAAAAGATAGG+GGG - chr4.3:4102604-4102623 MS.gene55839:intron 30.0%
!! ACCACAACTTTTGAAAAGAT+AGG - chr4.3:4102601-4102620 MS.gene55839:intron 30.0%
!! AGTTGGACCAATTTTTCAAT+GGG + chr4.3:4101239-4101258 None:intergenic 30.0%
!! CACAACTTTTGAAAAGATAG+GGG - chr4.3:4102603-4102622 MS.gene55839:intron 30.0%
!! CCACAACTTTTGAAAAGATA+GGG - chr4.3:4102602-4102621 MS.gene55839:intron 30.0%
!! GAACAATAACACTCTTGTTT+TGG - chr4.3:4100993-4101012 MS.gene55839:intron 30.0%
!!! AACTTTTGGGTTGAAATCTT+AGG + chr4.3:4102983-4103002 None:intergenic 30.0%
!!! AGTCCTCGTAATTTGTTTTA+GGG + chr4.3:4100213-4100232 None:intergenic 30.0%
!!! ATCTTTGGATTTGCTGATTT+TGG - chr4.3:4102248-4102267 MS.gene55839:intron 30.0%
!!! ATGATGTTCTTGAGGTTTTT+TGG - chr4.3:4102303-4102322 MS.gene55839:intron 30.0%
!!! TAGTCCTCGTAATTTGTTTT+AGG + chr4.3:4100214-4100233 None:intergenic 30.0%
!!! TATTGATTCTTTGGCAGTTT+TGG - chr4.3:4101393-4101412 MS.gene55839:intron 30.0%
!!! TATTGATTCTTTGGCAGTTT+TGG + chr4.3:4101412-4101393 None:intergenic 30.0%
!!! TGCAGATTTAGTTTTCTTCT+TGG - chr4.3:4101099-4101118 MS.gene55839:intron 30.0%
!!! TTTTTTGGAGTGTAGATCTT+TGG - chr4.3:4102233-4102252 MS.gene55839:intron 30.0%
AAATGAAGACAAATCGGTGA+AGG + chr4.3:4101921-4101940 None:intergenic 35.0%
AACAAGAGGAAGAATAGTGA+CGG - chr4.3:4098579-4098598 MS.gene55839:intron 35.0%
AACTGAAGCTTCAAGGTTAT+GGG - chr4.3:4104256-4104275 MS.gene55839:CDS 35.0%
AATAATTAGCAAGAACAGGC+AGG + chr4.3:4100789-4100808 None:intergenic 35.0%
AGACCCTAAAACAAATTACG+AGG - chr4.3:4100207-4100226 MS.gene55839:intron 35.0%
AGATATGGTCTTTATACGTG+AGG - chr4.3:4099885-4099904 MS.gene55839:intron 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr4.3:4099371-4099390 None:intergenic 35.0%
AGTTATGTTGGATCCCAATT+TGG + chr4.3:4104240-4104259 None:intergenic 35.0%
ATAACTATAATCTCCGCTTC+AGG + chr4.3:4098610-4098629 None:intergenic 35.0%
ATAATTAGCAAGAACAGGCA+GGG + chr4.3:4100788-4100807 None:intergenic 35.0%
ATCAACGACCAAGTCAAAAA+TGG - chr4.3:4102504-4102523 MS.gene55839:intron 35.0%
ATCAACGACCAAGTCAAAAA+TGG + chr4.3:4102523-4102504 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr4.3:4099539-4099558 MS.gene55839:intron 35.0%
ATGAAACATGCTTATCAGTG+TGG + chr4.3:4102855-4102874 None:intergenic 35.0%
ATGTATGGGTCCAAACTAAA+CGG - chr4.3:4103504-4103523 MS.gene55839:CDS 35.0%
ATGTATTCGCTCCACTATAT+CGG + chr4.3:4103421-4103440 None:intergenic 35.0%
CAATGTTCTCTATTTGTGCA+TGG - chr4.3:4101196-4101215 MS.gene55839:intron 35.0%
CCAAAGAATCAATACTTAGG+GGG - chr4.3:4102545-4102564 MS.gene55839:intron 35.0%
CCAAAGAATCAATACTTAGG+GGG + chr4.3:4102564-4102545 None:intergenic 35.0%
CGAAGAAAAAGAGGTGATAA+GGG + chr4.3:4101768-4101787 None:intergenic 35.0%
CTAGAGGATCGATGTTAATT+TGG + chr4.3:4102791-4102810 None:intergenic 35.0%
CTAGTTACACTTCCAAGTTT+CGG - chr4.3:4100306-4100325 MS.gene55839:intron 35.0%
CTGCCAAAGAATCAATACTT+AGG - chr4.3:4102542-4102561 MS.gene55839:intron 35.0%
CTGCCAAAGAATCAATACTT+AGG + chr4.3:4102561-4102542 None:intergenic 35.0%
CTTCTGTTTATGAGGTTTGA+AGG - chr4.3:4102277-4102296 MS.gene55839:intron 35.0%
GAAACCTCAACTTCCAAATT+GGG - chr4.3:4104224-4104243 MS.gene55839:CDS 35.0%
GAGATCTGAAAAACAATGGA+TGG - chr4.3:4103235-4103254 MS.gene55839:intron 35.0%
GATGAAGAAGATGGTTGAAA+CGG - chr4.3:4099208-4099227 MS.gene55839:intron 35.0%
GCCAAAGAATCAATACTTAG+GGG - chr4.3:4102544-4102563 MS.gene55839:intron 35.0%
GCCAAAGAATCAATACTTAG+GGG + chr4.3:4102563-4102544 None:intergenic 35.0%
GGTTAAATACCTAATCGGAT+CGG - chr4.3:4098369-4098388 MS.gene55839:CDS 35.0%
GTTCCAAATCGAAGAAAAAG+AGG + chr4.3:4101777-4101796 None:intergenic 35.0%
TAACTGAAGCTTCAAGGTTA+TGG - chr4.3:4104255-4104274 MS.gene55839:CDS 35.0%
TATAGTAGATGAGATCGAGA+TGG + chr4.3:4100654-4100673 None:intergenic 35.0%
TATTGTATTTACCTGGGGAA+TGG + chr4.3:4101143-4101162 None:intergenic 35.0%
TCGAAGAAAAAGAGGTGATA+AGG + chr4.3:4101769-4101788 None:intergenic 35.0%
TGAAGCGGAGATTATAGTTA+TGG - chr4.3:4098609-4098628 MS.gene55839:intron 35.0%
TGTTTGTGAGTTATGGTTGT+TGG + chr4.3:4102887-4102906 None:intergenic 35.0%
TTATAGCAAATGAAGTCGTG+GGG + chr4.3:4100759-4100778 None:intergenic 35.0%
! CACATTTTTGTTCCGAAACT+TGG + chr4.3:4100321-4100340 None:intergenic 35.0%
! CCCTAACTTTTCAAAAGTTG+CGG - chr4.3:4101327-4101346 MS.gene55839:intron 35.0%
! CCCTATCTTTTCAAAAGTTG+TGG + chr4.3:4102605-4102624 None:intergenic 35.0%
! CTGCAATTTTGCCAAAACTT+TGG - chr4.3:4099836-4099855 MS.gene55839:intron 35.0%
! CTTTTCAAAAGTTGCGGTTA+TGG - chr4.3:4101333-4101352 MS.gene55839:intron 35.0%
! GGTTTGTTCTTCTGTTTATG+AGG - chr4.3:4102269-4102288 MS.gene55839:intron 35.0%
! TCACCTCTTTTTCTTCGATT+TGG - chr4.3:4101771-4101790 MS.gene55839:CDS 35.0%
! TCTAGGCTTAATTGCACTTT+TGG + chr4.3:4102630-4102649 None:intergenic 35.0%
! TGTTGACTAGAAACAATGCT+GGG - chr4.3:4099004-4099023 MS.gene55839:intron 35.0%
! TTGGGGTATTAAATATGTGC+AGG - chr4.3:4100875-4100894 MS.gene55839:intron 35.0%
! TTTCAAGTACGGCTTGTTTA+CGG + chr4.3:4100350-4100369 None:intergenic 35.0%
!! ACCGCAACTTTTGAAAAGTT+AGG + chr4.3:4101331-4101350 None:intergenic 35.0%
!! CAAAGTTTTGGCAAAATTGC+AGG + chr4.3:4099838-4099857 None:intergenic 35.0%
!! CCGCAACTTTTGAAAAGTTA+GGG + chr4.3:4101330-4101349 None:intergenic 35.0%
!! CGCAACTTTTGAAAAGTTAG+GGG + chr4.3:4101329-4101348 None:intergenic 35.0%
!! GCAACTTTTGAAAAGTTAGG+GGG + chr4.3:4101328-4101347 None:intergenic 35.0%
!! GCTTGCTGGCATTTTTAAAT+TGG - chr4.3:4101515-4101534 MS.gene55839:intron 35.0%
!! TGAGTGTTGTTTGTGTTCAA+TGG - chr4.3:4102957-4102976 MS.gene55839:intron 35.0%
!! TGAGTTCATTTCTAGTGACT+CGG - chr4.3:4102048-4102067 MS.gene55839:intron 35.0%
!! TGCTAGCTTTGAAGAATTGT+AGG + chr4.3:4103726-4103745 None:intergenic 35.0%
!!! CAAATATTGTTTTGAAGGGG+AGG + chr4.3:4103753-4103772 None:intergenic 35.0%
!!! CTTGTTTTGGGTCAAAGTTT+TGG - chr4.3:4101006-4101025 MS.gene55839:intron 35.0%
AAAAATGCGGAGGAAACAAG+AGG - chr4.3:4098565-4098584 MS.gene55839:intron 40.0%
AAAAGAGAGCAAAGTGTGAG+AGG - chr4.3:4103898-4103917 MS.gene55839:intron 40.0%
AAACATGCTTATCAGTGTGG+TGG + chr4.3:4102852-4102871 None:intergenic 40.0%
AACAGAAGAGAAGAAAGGAG+AGG + chr4.3:4102003-4102022 None:intergenic 40.0%
AACCGAATCCAACATCAAGA+AGG + chr4.3:4101876-4101895 None:intergenic 40.0%
AAGTAGAGTCGTTGAATGAG+AGG - chr4.3:4103983-4104002 MS.gene55839:intron 40.0%
AATGGCACCGTAAGAATTGT+TGG + chr4.3:4103047-4103066 None:intergenic 40.0%
ACATACATGAGGAGATTGAG+AGG + chr4.3:4098700-4098719 None:intergenic 40.0%
ACCAAGTCAAAAATGGACCA+AGG - chr4.3:4102511-4102530 MS.gene55839:intron 40.0%
ACCAAGTCAAAAATGGACCA+GGG + chr4.3:4102530-4102511 None:intergenic 40.0%
AGAAAAAGAGGTGATAAGGG+TGG + chr4.3:4101765-4101784 None:intergenic 40.0%
AGAGGAAGATTAGTGGTTGT+GGG + chr4.3:4101597-4101616 None:intergenic 40.0%
AGCTGCAACAACATGTTATG+TGG - chr4.3:4104148-4104167 MS.gene55839:CDS 40.0%
AGTAAACCAACCGTGTATTG+CGG + chr4.3:4099276-4099295 None:intergenic 40.0%
ATAAGGGTGGAGGCTTATTA+CGG + chr4.3:4101752-4101771 None:intergenic 40.0%
ATCAAAGGAGAGAGAGATAC+TGG + chr4.3:4102697-4102716 None:intergenic 40.0%
CAAGTCAAAAATGGACCAAG+GGG - chr4.3:4102513-4102532 MS.gene55839:intron 40.0%
CACCTTCTTGATGTTGGATT+CGG - chr4.3:4101871-4101890 MS.gene55839:intron 40.0%
CATACATGAGGAGATTGAGA+GGG + chr4.3:4098699-4098718 None:intergenic 40.0%
CATATCTCTTCCGAGTTACA+TGG + chr4.3:4099872-4099891 None:intergenic 40.0%
CATGTAACTCGGAAGAGATA+TGG - chr4.3:4099870-4099889 MS.gene55839:intron 40.0%
CCAACATAACTGAAGCTTCA+AGG - chr4.3:4104249-4104268 MS.gene55839:CDS 40.0%
CCAAGTCAAAAATGGACCAA+GGG - chr4.3:4102512-4102531 MS.gene55839:intron 40.0%
CCTTGAAGCTTCAGTTATGT+TGG + chr4.3:4104252-4104271 None:intergenic 40.0%
CGAAACCTCAACTTCCAAAT+TGG - chr4.3:4104223-4104242 MS.gene55839:CDS 40.0%
CTCAACCTTCATCACAAACT+CGG + chr4.3:4102150-4102169 None:intergenic 40.0%
CTCATATATGCCGCAACAAA+AGG - chr4.3:4099318-4099337 MS.gene55839:intron 40.0%
CTGCACTGCAGACATAAAAA+AGG + chr4.3:4101034-4101053 None:intergenic 40.0%
GAAGGTTCATGATGTTCTTG+AGG - chr4.3:4102295-4102314 MS.gene55839:intron 40.0%
GCCAGTAATACCATGTAACT+CGG - chr4.3:4099859-4099878 MS.gene55839:intron 40.0%
GGAGAAAGAACAAGTAAGTC+TGG + chr4.3:4101828-4101847 None:intergenic 40.0%
GGTGAAGGAAGAAGAAAGAA+CGG + chr4.3:4101906-4101925 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + chr4.3:4099370-4099389 None:intergenic 40.0%
GTGAAAACGAGTAACGAAGT+TGG + chr4.3:4098665-4098684 None:intergenic 40.0%
GTTTACGTAGAACATGCACA+AGG + chr4.3:4103532-4103551 None:intergenic 40.0%
GTTTGGACCCATACATGTAT+TGG + chr4.3:4103500-4103519 None:intergenic 40.0%
TAATTAGCAAGAACAGGCAG+GGG + chr4.3:4100787-4100806 None:intergenic 40.0%
TCCGAGTTACATGGTATTAC+TGG + chr4.3:4099863-4099882 None:intergenic 40.0%
TTGTGATGAAGGTTGAGGTT+TGG - chr4.3:4102153-4102172 MS.gene55839:CDS 40.0%
! ATTAGGTCAAAGGCAGCTTT+TGG + chr4.3:4104311-4104330 None:intergenic 40.0%
! CACTGGTTAAGGCCTTTAAA+TGG - chr4.3:4100066-4100085 MS.gene55839:intron 40.0%
! CTGTTGACTAGAAACAATGC+TGG - chr4.3:4099003-4099022 MS.gene55839:intron 40.0%
! GATATAGTGGAGCGAATACA+TGG - chr4.3:4103420-4103439 MS.gene55839:CDS 40.0%
! GTATTACTGGCCCAAAGTTT+TGG + chr4.3:4099850-4099869 None:intergenic 40.0%
! GTTACTCGTTTTCACTCCAT+CGG - chr4.3:4098670-4098689 MS.gene55839:intron 40.0%
! TTCAAGTACGGCTTGTTTAC+GGG + chr4.3:4100349-4100368 None:intergenic 40.0%
!! AACAATTCTTACGGTGCCAT+TGG - chr4.3:4103046-4103065 MS.gene55839:intron 40.0%
!! ACGTGAGGTGTTGTTACTAT+AGG - chr4.3:4099900-4099919 MS.gene55839:intron 40.0%
!! CCCCCTAAGTATTGATTCTT+TGG - chr4.3:4101384-4101403 MS.gene55839:intron 40.0%
!! CCCCCTAAGTATTGATTCTT+TGG + chr4.3:4101403-4101384 None:intergenic 40.0%
!! TGTTGGTGATGGTGTATCAA+AGG + chr4.3:4102712-4102731 None:intergenic 40.0%
!! TTCTTCGATTTGGAACTGCA+AGG - chr4.3:4101781-4101800 MS.gene55839:CDS 40.0%
!!! GCTTGCTGGCATTTTGAAAT+TGG + chr4.3:4102415-4102434 None:intergenic 40.0%
AAAAGAGGTGATAAGGGTGG+AGG + chr4.3:4101762-4101781 None:intergenic 45.0%
AAATACCTAATCGGATCGGC+TGG - chr4.3:4098373-4098392 MS.gene55839:CDS 45.0%
AAGAGTGAGAGAGCAACTCA+TGG + chr4.3:4102674-4102693 None:intergenic 45.0%
AGAAGGGAGAGGAAGATTAG+TGG + chr4.3:4101604-4101623 None:intergenic 45.0%
AGAAGGTTGGAGAGAGAAAG+TGG - chr4.3:4103321-4103340 MS.gene55839:intron 45.0%
AGAGAAAGTGGAGGAGGAAA+AGG - chr4.3:4103333-4103352 MS.gene55839:intron 45.0%
AGGAGAAGGGAGAGGAAAAA+GGG + chr4.3:4101672-4101691 None:intergenic 45.0%
ATCATAACAGGTGGTACGTC+AGG - chr4.3:4098472-4098491 MS.gene55839:CDS 45.0%
ATGCTTATCAGTGTGGTGGT+TGG + chr4.3:4102848-4102867 None:intergenic 45.0%
CAACATCAAGAAGGTGAGCA+AGG + chr4.3:4101867-4101886 None:intergenic 45.0%
CAAGTCAAAAATGGACCAGG+GGG + chr4.3:4101419-4101438 None:intergenic 45.0%
CCAAGTCAAAAATGGACCAG+GGG + chr4.3:4101420-4101439 None:intergenic 45.0%
CGAGTTTGTGATGAAGGTTG+AGG - chr4.3:4102148-4102167 MS.gene55839:CDS 45.0%
CTCGTTAGTGTGGAAAACGT+TGG + chr4.3:4100525-4100544 None:intergenic 45.0%
CTTGCTCACCTTCTTGATGT+TGG - chr4.3:4101865-4101884 MS.gene55839:intron 45.0%
GAAGATGGTTGAAACGGCAA+AGG - chr4.3:4099214-4099233 MS.gene55839:intron 45.0%
GACCAAGTCAAAAATGGACC+AGG + chr4.3:4102529-4102510 None:intergenic 45.0%
GAGAAAGTGGAGGAGGAAAA+GGG - chr4.3:4103334-4103353 MS.gene55839:intron 45.0%
GAGAGGAAGATTAGTGGTTG+TGG + chr4.3:4101598-4101617 None:intergenic 45.0%
GAGATTCTCCAGCAAGAAGA+AGG - chr4.3:4103304-4103323 MS.gene55839:intron 45.0%
GAGGTTGTCAGTAAGGAGAA+GGG + chr4.3:4101620-4101639 None:intergenic 45.0%
GAGTAGAAGGTCCGATATAG+TGG - chr4.3:4103407-4103426 MS.gene55839:CDS 45.0%
GATTTGGATCCAAAACCGCT+TGG + chr4.3:4098400-4098419 None:intergenic 45.0%
GCGGCATATATGAGCCAAAT+AGG + chr4.3:4099312-4099331 None:intergenic 45.0%
GCGTAGTGTAGTGTAGTGTT+TGG + chr4.3:4100395-4100414 None:intergenic 45.0%
GCTGGTGAGTAAACATCTAG+AGG + chr4.3:4102807-4102826 None:intergenic 45.0%
GGAAGGAAGAGTGGTGATAA+GGG + chr4.3:4101710-4101729 None:intergenic 45.0%
GGATCCCAATTTGGAAGTTG+AGG + chr4.3:4104231-4104250 None:intergenic 45.0%
GTGAAGGCTTTCTTACAGGT+TGG - chr4.3:4100967-4100986 MS.gene55839:intron 45.0%
TAGTGGTTGTGGGAGAAGAA+GGG + chr4.3:4101587-4101606 None:intergenic 45.0%
TGACGTACCACCTGTTATGA+TGG + chr4.3:4098473-4098492 None:intergenic 45.0%
TGGAAGGAAGAGTGGTGATA+AGG + chr4.3:4101711-4101730 None:intergenic 45.0%
TTAGTGGTTGTGGGAGAAGA+AGG + chr4.3:4101588-4101607 None:intergenic 45.0%
TTCTCCAGCAAGAAGAAGGT+TGG - chr4.3:4103308-4103327 MS.gene55839:intron 45.0%
TTGAAACGGCAAAGGAGACA+GGG - chr4.3:4099222-4099241 MS.gene55839:intron 45.0%
TTTGCGGCAGCCTCAAAATA+TGG + chr4.3:4102348-4102367 None:intergenic 45.0%
! AAGTCTGGCTCAGTTCAAGT+CGG + chr4.3:4101813-4101832 None:intergenic 45.0%
! CGATTTGGAACTGCAAGGAT+GGG - chr4.3:4101786-4101805 MS.gene55839:CDS 45.0%
! CTTGATGTTGGATTCGGTTC+TGG - chr4.3:4101877-4101896 MS.gene55839:intron 45.0%
! GGGAATGGTCTTTAAGAGCT+TGG + chr4.3:4101128-4101147 None:intergenic 45.0%
! GTGAAAAACCAAACTGGCTC+AGG - chr4.3:4099545-4099564 MS.gene55839:intron 45.0%
! TGAAGGTTGAGGTTTGGTAC+TGG - chr4.3:4102159-4102178 MS.gene55839:CDS 45.0%
!! AGAATCCTTAAAGAGTGCCC+CGG - chr4.3:4100169-4100188 MS.gene55839:intron 45.0%
!! AGGCTTTCTTACAGGTTGGT+AGG - chr4.3:4100971-4100990 MS.gene55839:intron 45.0%
!! CCCTTGGTCCATTTTTGACT+TGG + chr4.3:4102515-4102534 None:intergenic 45.0%
!! GCAATACACGGTTGGTTTAC+TGG - chr4.3:4099275-4099294 MS.gene55839:intron 45.0%
!! TCGATTTGGAACTGCAAGGA+TGG - chr4.3:4101785-4101804 MS.gene55839:CDS 45.0%
!! TTATGATGGCGGTGATGGAA+CGG + chr4.3:4098459-4098478 None:intergenic 45.0%
!! AATTTAATTAATTAATATTG+TGG - chr4.3:4099155-4099174 MS.gene55839:intron 5.0%
!! TTTATCAATTTAATATATTA+AGG + chr4.3:4099981-4100000 None:intergenic 5.0%
AACGCAGTTCACAGTCACGT+TGG + chr4.3:4100910-4100929 None:intergenic 50.0%
AACGTGTCGTCCGCAATACA+CGG - chr4.3:4099263-4099282 MS.gene55839:intron 50.0%
AAGAAAGCCTTCACGCTCTC+TGG + chr4.3:4100961-4100980 None:intergenic 50.0%
AAGAGTGGTGATAAGGGTGG+AGG + chr4.3:4101704-4101723 None:intergenic 50.0%
AAGGGTGGAGGTTGTCAGTA+AGG + chr4.3:4101627-4101646 None:intergenic 50.0%
ACAGGTGGTACGTCAGGAAT+CGG - chr4.3:4098478-4098497 MS.gene55839:CDS 50.0%
ACGGATCAGATGACGATGGA+AGG + chr4.3:4101727-4101746 None:intergenic 50.0%
ACTGTGAACTGCGTTCATCC+GGG - chr4.3:4100915-4100934 MS.gene55839:intron 50.0%
AGATTATACTCCCTCCGTCC+CGG + chr4.3:4099575-4099594 None:intergenic 50.0%
AGGAAGAGTGGTGATAAGGG+TGG + chr4.3:4101707-4101726 None:intergenic 50.0%
AGGAGACAGGGATACAAGGA+AGG - chr4.3:4099234-4099253 MS.gene55839:intron 50.0%
AGGTTGGAGAGAGAAAGTGG+AGG - chr4.3:4103324-4103343 MS.gene55839:intron 50.0%
AGTGTGGTGGTTGGAGTGAA+TGG + chr4.3:4102839-4102858 None:intergenic 50.0%
ATCACCGCCATCATAACAGG+TGG - chr4.3:4098463-4098482 MS.gene55839:CDS 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr4.3:4099366-4099385 None:intergenic 50.0%
CACGTGGCACCAAACATAAG+GGG - chr4.3:4102466-4102485 MS.gene55839:intron 50.0%
CACGTGGCACCAAACATAAG+GGG + chr4.3:4102485-4102466 None:intergenic 50.0%
CATCAAGAAGGTGAGCAAGG+CGG + chr4.3:4101864-4101883 None:intergenic 50.0%
CCACGTGGCACCAAACATAA+GGG - chr4.3:4102465-4102484 MS.gene55839:intron 50.0%
CCACGTGGCACCAAACATAA+GGG + chr4.3:4102484-4102465 None:intergenic 50.0%
CGTACCACCTGTTATGATGG+CGG + chr4.3:4098470-4098489 None:intergenic 50.0%
CTAGCTGAACACTCGTCTCT+GGG - chr4.3:4099649-4099668 MS.gene55839:intron 50.0%
CTCTCCAACCTTCTTCTTGC+TGG + chr4.3:4103315-4103334 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+GGG - chr4.3:4100043-4100062 MS.gene55839:intron 50.0%
GAACAAGTCACCGAAACCTG+CGG - chr4.3:4098427-4098446 MS.gene55839:CDS 50.0%
GACTGTGAACTGCGTTCATC+CGG - chr4.3:4100914-4100933 MS.gene55839:intron 50.0%
GAGATTGAGAGGGAAACCGA+TGG + chr4.3:4098689-4098708 None:intergenic 50.0%
GAGCGTGAAGGCTTTCTTAC+AGG - chr4.3:4100963-4100982 MS.gene55839:intron 50.0%
GAGGAGAAGGGAGAGGAAAA+AGG + chr4.3:4101673-4101692 None:intergenic 50.0%
GATGACGATGGAAGGAAGAG+TGG + chr4.3:4101719-4101738 None:intergenic 50.0%
GCAAAGGAGACAGGGATACA+AGG - chr4.3:4099230-4099249 MS.gene55839:intron 50.0%
GCACCAAACATAAGGGGTCT+GGG - chr4.3:4102472-4102491 MS.gene55839:intron 50.0%
GCACCAAACATAAGGGGTCT+GGG + chr4.3:4102491-4102472 None:intergenic 50.0%
GCGTAGCATGAAAAATGCGG+AGG - chr4.3:4098555-4098574 MS.gene55839:intron 50.0%
GCTCTTAAAGACCATTCCCC+AGG - chr4.3:4101129-4101148 MS.gene55839:intron 50.0%
GGAAATGTTAACCAGTGCCC+CGG - chr4.3:4100042-4100061 MS.gene55839:intron 50.0%
GGAGAAGGGAGAGGAAAAAG+GGG + chr4.3:4101671-4101690 None:intergenic 50.0%
GGAGGTTGTCAGTAAGGAGA+AGG + chr4.3:4101621-4101640 None:intergenic 50.0%
GGCGCGTAGCATGAAAAATG+CGG - chr4.3:4098552-4098571 MS.gene55839:intron 50.0%
GTGGAAAACGTTGGCGAGTT+TGG + chr4.3:4100516-4100535 None:intergenic 50.0%
GTTATGTGGCAACTCACCCA+AGG - chr4.3:4104162-4104181 MS.gene55839:CDS 50.0%
GTTGAAACGGCAAAGGAGAC+AGG - chr4.3:4099221-4099240 MS.gene55839:intron 50.0%
TAAAGGCCTTAACCAGTGCC+CGG + chr4.3:4100064-4100083 None:intergenic 50.0%
TAGCTGAACACTCGTCTCTG+GGG - chr4.3:4099650-4099669 MS.gene55839:intron 50.0%
TCCACGTGGCACCAAACATA+AGG - chr4.3:4102464-4102483 MS.gene55839:intron 50.0%
TCCACGTGGCACCAAACATA+AGG + chr4.3:4102483-4102464 None:intergenic 50.0%
TCCATCACCGCCATCATAAC+AGG - chr4.3:4098460-4098479 MS.gene55839:CDS 50.0%
TGCGAGAAAGCTCGTTAGTG+TGG + chr4.3:4100535-4100554 None:intergenic 50.0%
TGGCGACGTCATCTCCTATT+TGG - chr4.3:4099295-4099314 MS.gene55839:intron 50.0%
TGGTGGTTGGAGTGAATGGA+GGG + chr4.3:4102835-4102854 None:intergenic 50.0%
TGTCAGTAAGGAGAAGGGAG+AGG + chr4.3:4101615-4101634 None:intergenic 50.0%
TTGGAGAGAGAAAGTGGAGG+AGG - chr4.3:4103327-4103346 MS.gene55839:intron 50.0%
! AGAAGAGCACGCAATCTCTG+AGG - chr4.3:4099035-4099054 MS.gene55839:intron 50.0%
! CAAACTGGCTCAGGTATTCC+GGG - chr4.3:4099554-4099573 MS.gene55839:intron 50.0%
! CCAAACTGGCTCAGGTATTC+CGG - chr4.3:4099553-4099572 MS.gene55839:intron 50.0%
! GCAGTCAGCAAAGTACTTGC+CGG + chr4.3:4104201-4104220 None:intergenic 50.0%
! GCATTTTTCATGCTACGCGC+CGG + chr4.3:4098553-4098572 None:intergenic 50.0%
! GGAAAGAGCATAAGCACGTG+TGG + chr4.3:4100495-4100514 None:intergenic 50.0%
! GTGGAGGAGGAAAAGGGTTT+TGG - chr4.3:4103340-4103359 MS.gene55839:intron 50.0%
!! AATCCTTAAAGAGTGCCCCG+GGG - chr4.3:4100171-4100190 MS.gene55839:intron 50.0%
!! ACCTGTTATGATGGCGGTGA+TGG + chr4.3:4098464-4098483 None:intergenic 50.0%
!! CCCCTGGTCCATTTTTGACT+TGG - chr4.3:4101417-4101436 MS.gene55839:intron 50.0%
!! GAATCCTTAAAGAGTGCCCC+GGG - chr4.3:4100170-4100189 MS.gene55839:intron 50.0%
!! GAGCACCGAGTTTGTGATGA+AGG - chr4.3:4102142-4102161 MS.gene55839:intron 50.0%
!! GCACAAGGTGCCGTTTAGTT+TGG + chr4.3:4103517-4103536 None:intergenic 50.0%
!! GCAGGTTTCGGTGACTTGTT+CGG + chr4.3:4098428-4098447 None:intergenic 50.0%
!! TGACTTGGTCGTTGATGACG+TGG - chr4.3:4101432-4101451 MS.gene55839:intron 50.0%
!! TGACTTGGTCGTTGATGACG+TGG + chr4.3:4101451-4101432 None:intergenic 50.0%
AAAGGCCTTAACCAGTGCCC+GGG + chr4.3:4100063-4100082 None:intergenic 55.0%
AGGGGTAGCAACGACGATGA+CGG + chr4.3:4101653-4101672 None:intergenic 55.0%
AGTGAATGGAGGGGTGATGC+TGG + chr4.3:4102825-4102844 None:intergenic 55.0%
AGTGGTGATAAGGGTGGAGG+TGG + chr4.3:4101701-4101720 None:intergenic 55.0%
CAAGGCGGAATCGAAGTGGA+GGG + chr4.3:4101849-4101868 None:intergenic 55.0%
CCAAGGCTCGTCAATGTGTC+CGG - chr4.3:4104179-4104198 MS.gene55839:CDS 55.0%
CCGGAATACCTGAGCCAGTT+TGG + chr4.3:4099556-4099575 None:intergenic 55.0%
CGAGCTTTCTCGCAGACTCA+AGG - chr4.3:4100541-4100560 MS.gene55839:intron 55.0%
CGGACACATTGACGAGCCTT+GGG + chr4.3:4104181-4104200 None:intergenic 55.0%
CTGTGAACTGCGTTCATCCG+GGG - chr4.3:4100916-4100935 MS.gene55839:intron 55.0%
GCACCCAGACCCCTTATGTT+TGG - chr4.3:4101454-4101473 MS.gene55839:intron 55.0%
GCACCCAGACCCCTTATGTT+TGG + chr4.3:4101473-4101454 None:intergenic 55.0%
GCTAGCTGAACACTCGTCTC+TGG - chr4.3:4099648-4099667 MS.gene55839:intron 55.0%
GGCACCAAACATAAGGGGTC+TGG - chr4.3:4102471-4102490 MS.gene55839:intron 55.0%
GGCACCAAACATAAGGGGTC+TGG + chr4.3:4102490-4102471 None:intergenic 55.0%
GGTGGTTGGAGTGAATGGAG+GGG + chr4.3:4102834-4102853 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr4.3:4099362-4099381 None:intergenic 55.0%
GTCAGGAATCGGAGCGGAAA+CGG - chr4.3:4098489-4098508 MS.gene55839:CDS 55.0%
GTGATAAGGGTGGAGGTGGT+CGG + chr4.3:4101697-4101716 None:intergenic 55.0%
GTGGAGGCTTATTACGGCGA+CGG + chr4.3:4101746-4101765 None:intergenic 55.0%
GTGGTGGTTGGAGTGAATGG+AGG + chr4.3:4102836-4102855 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + chr4.3:4100190-4100209 None:intergenic 55.0%
TGAGCAAGGCGGAATCGAAG+TGG + chr4.3:4101853-4101872 None:intergenic 55.0%
TGGTACGTCAGGAATCGGAG+CGG - chr4.3:4098483-4098502 MS.gene55839:CDS 55.0%
TGTCGTCCGCAATACACGGT+TGG - chr4.3:4099267-4099286 MS.gene55839:intron 55.0%
TGTGAACTGCGTTCATCCGG+GGG - chr4.3:4100917-4100936 MS.gene55839:intron 55.0%
TTCACGCTCTCTGGTGAGTC+TGG + chr4.3:4100952-4100971 None:intergenic 55.0%
TTGGACCAGCCGATCCGATT+AGG + chr4.3:4098381-4098400 None:intergenic 55.0%
! ACTCGTCTCTGGGGATTGGT+TGG - chr4.3:4099659-4099678 MS.gene55839:intron 55.0%
! AGACTCACCAGAGAGCGTGA+AGG - chr4.3:4100951-4100970 MS.gene55839:intron 55.0%
! AGGGGCGAGGGTGATTTTAC+CGG - chr4.3:4098531-4098550 MS.gene55839:CDS 55.0%
! AGTGACGGAGTGTCCTGAAG+CGG - chr4.3:4098594-4098613 MS.gene55839:intron 55.0%
! GAACACTCGTCTCTGGGGAT+TGG - chr4.3:4099655-4099674 MS.gene55839:intron 55.0%
! GACTTGTTCGGCGGTGGATT+TGG + chr4.3:4098416-4098435 None:intergenic 55.0%
! GAGCACGCAATCTCTGAGGA+TGG - chr4.3:4099039-4099058 MS.gene55839:intron 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + chr4.3:4100191-4100210 None:intergenic 55.0%
!! ATCCTTAAAGAGTGCCCCGG+GGG - chr4.3:4100172-4100191 MS.gene55839:intron 55.0%
!! CCCTTATGTTTGGTGCCACG+TGG - chr4.3:4101464-4101483 MS.gene55839:intron 55.0%
!! CCCTTATGTTTGGTGCCACG+TGG + chr4.3:4101483-4101464 None:intergenic 55.0%
!! CTTTGGCAGTTTTGGCCCCT+TGG + chr4.3:4102531-4102550 None:intergenic 55.0%
!! GGTTTCGGTGACTTGTTCGG+CGG + chr4.3:4098425-4098444 None:intergenic 55.0%
AACTACCACTCCCTCCGTCC+CGG - chr4.3:4099349-4099368 MS.gene55839:intron 60.0%
AAGGCCTTAACCAGTGCCCG+GGG + chr4.3:4100062-4100081 None:intergenic 60.0%
ACGGAGATCGCCGCAGGTTT+CGG + chr4.3:4098440-4098459 None:intergenic 60.0%
ACGTGTGGCGTCGTACTCAC+TGG + chr4.3:4100480-4100499 None:intergenic 60.0%
ATATTCCGGGACGGAGGGAG+TGG + chr4.3:4099357-4099376 None:intergenic 60.0%
CCGGACACATTGACGAGCCT+TGG + chr4.3:4104182-4104201 None:intergenic 60.0%
CGTGTGGCGTCGTACTCACT+GGG + chr4.3:4100479-4100498 None:intergenic 60.0%
CTCAGGTATTCCGGGACGGA+GGG - chr4.3:4099562-4099581 MS.gene55839:intron 60.0%
CTGGCTCAGGTATTCCGGGA+CGG - chr4.3:4099558-4099577 MS.gene55839:intron 60.0%
CTTGTTAACGAGTGCCCCCG+GGG + chr4.3:4100189-4100208 None:intergenic 60.0%
GAGGTGGTCGGTGAGGAGAA+GGG + chr4.3:4101685-4101704 None:intergenic 60.0%
GCAAGGCGGAATCGAAGTGG+AGG + chr4.3:4101850-4101869 None:intergenic 60.0%
GGCGACGGATCAGATGACGA+TGG + chr4.3:4101731-4101750 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr4.3:4099363-4099382 None:intergenic 60.0%
GTGTGGCGTCGTACTCACTG+GGG + chr4.3:4100478-4100497 None:intergenic 60.0%
! ATCGGATCGGCTGGTCCAAG+CGG - chr4.3:4098382-4098401 MS.gene55839:CDS 60.0%
! CAACGACGATGACGGCGGAA+GGG + chr4.3:4101645-4101664 None:intergenic 60.0%
! CGCGTGTGTTGGCGAAGAGA+GGG - chr4.3:4098512-4098531 MS.gene55839:CDS 60.0%
! GCGTGTGTTGGCGAAGAGAG+GGG - chr4.3:4098513-4098532 MS.gene55839:CDS 60.0%
! GGTAGCAACGACGATGACGG+CGG + chr4.3:4101650-4101669 None:intergenic 60.0%
!! AGTCTGGTTCTCACGACCCC+CGG + chr4.3:4100936-4100955 None:intergenic 60.0%
!! CTTTGGCAGTTTTGGCCCCC+TGG - chr4.3:4101401-4101420 MS.gene55839:intron 60.0%
!! TCGGCTGGTCCAAGCGGTTT+TGG - chr4.3:4098388-4098407 MS.gene55839:CDS 60.0%
!! TTCGGTGACTTGTTCGGCGG+TGG + chr4.3:4098422-4098441 None:intergenic 60.0%
AAGGGTGGAGGTGGTCGGTG+AGG + chr4.3:4101692-4101711 None:intergenic 65.0%
AGCGGAAACGGCGCGTGTGT+TGG - chr4.3:4098501-4098520 MS.gene55839:CDS 65.0%
GATGGAACGGAGATCGCCGC+AGG + chr4.3:4098446-4098465 None:intergenic 65.0%
GCTCAGGTATTCCGGGACGG+AGG - chr4.3:4099561-4099580 MS.gene55839:intron 65.0%
GGAGGTGGTCGGTGAGGAGA+AGG + chr4.3:4101686-4101705 None:intergenic 65.0%
GGTCGGTGAGGAGAAGGGAG+AGG + chr4.3:4101680-4101699 None:intergenic 65.0%
GTTGGCGAAGAGAGGGGCGA+GGG - chr4.3:4098519-4098538 MS.gene55839:CDS 65.0%
TGTTGGCGAAGAGAGGGGCG+AGG - chr4.3:4098518-4098537 MS.gene55839:CDS 65.0%
TTAACCAGTGCCCCGGGCAC+TGG - chr4.3:4100049-4100068 MS.gene55839:intron 65.0%
TTAACCAGTGCCCGGGGCAC+TGG + chr4.3:4100056-4100075 None:intergenic 65.0%
! GCAACGACGATGACGGCGGA+AGG + chr4.3:4101646-4101665 None:intergenic 65.0%
! GCGCGTGTGTTGGCGAAGAG+AGG - chr4.3:4098511-4098530 MS.gene55839:CDS 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG + chr4.3:4100177-4100196 None:intergenic 65.0%
!! AGTGCCCCGGGCACTGGTTA+AGG - chr4.3:4100055-4100074 MS.gene55839:intron 65.0%
! CGACGATGACGGCGGAAGGG+TGG + chr4.3:4101642-4101661 None:intergenic 70.0%
! CGATGACGGCGGAAGGGTGG+AGG + chr4.3:4101639-4101658 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 4098358 4104349 4098358 ID=MS.gene55839
chr4.3 mRNA 4098358 4104349 4098358 ID=MS.gene55839.t1;Parent=MS.gene55839
chr4.3 exon 4103994 4104349 4103994 ID=MS.gene55839.t1.exon1;Parent=MS.gene55839.t1
chr4.3 CDS 4103994 4104349 4103994 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4103614 4103693 4103614 ID=MS.gene55839.t1.exon2;Parent=MS.gene55839.t1
chr4.3 CDS 4103614 4103693 4103614 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4103368 4103524 4103368 ID=MS.gene55839.t1.exon3;Parent=MS.gene55839.t1
chr4.3 CDS 4103368 4103524 4103368 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4102145 4102226 4102145 ID=MS.gene55839.t1.exon4;Parent=MS.gene55839.t1
chr4.3 CDS 4102145 4102226 4102145 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4101723 4101810 4101723 ID=MS.gene55839.t1.exon5;Parent=MS.gene55839.t1
chr4.3 CDS 4101723 4101810 4101723 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4101557 4101603 4101557 ID=MS.gene55839.t1.exon6;Parent=MS.gene55839.t1
chr4.3 CDS 4101557 4101603 4101557 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
chr4.3 exon 4098358 4098561 4098358 ID=MS.gene55839.t1.exon7;Parent=MS.gene55839.t1
chr4.3 CDS 4098358 4098561 4098358 ID=cds.MS.gene55839.t1;Parent=MS.gene55839.t1
Gene Sequence

>MS.gene55839

ATGCTTGAAACGGTTAAATACCTAATCGGATCGGCTGGTCCAAGCGGTTTTGGATCCAAATCCACCGCCGAACAAGTCACCGAAACCTGCGGCGATCTCCGTTCCATCACCGCCATCATAACAGGTGGTACGTCAGGAATCGGAGCGGAAACGGCGCGTGTGTTGGCGAAGAGAGGGGCGAGGGTGATTTTACCGGCGCGTAGCATGAAAAATGCGGAGGAAACAAGAGGAAGAATAGTGACGGAGTGTCCTGAAGCGGAGATTATAGTTATGGCACTTGATCTCAGTTCTCTCAATTCTGTTACCAACTTCGTTACTCGTTTTCACTCCATCGGTTTCCCTCTCAATCTCCTCATGTATGTATATGTATATACTCTCATTTCATGCAATTATGTTTTATCACATACACACATCGACAGTATTAATAATTTGATAAAAATAACATAATTCATTATAATTTCATGTGTTGGTGTCGGCGTCAGACATTAACACAAACATTAACACATGTACGTCTTCCATTAGAAGTGTCGAGATTTATTTATCATTTTTAATGATCTAATCTAATCTAATACAGTACATAAGTAGTACAGTATATATTTTTTTCGTTCTTTGACCATATTTATTTATTTGAATTTGAATGATTGGCTGTTGACTAGAAACAATGCTGGGAAGTTTGCAGAAGAGCACGCAATCTCTGAGGATGGAGTTGAAATGACCTTTGCCACTAATTATTTAGGTGAGTAAGATTACAACAAATTAATTTTTATATATTTTTGTTATTTGATGGGTATATATATAATTTAATTAATTAATATTGTGGTGCAGGTCATTTTCTGTTGACAAAAATGTTGATGAAGAAGATGGTTGAAACGGCAAAGGAGACAGGGATACAAGGAAGGATAGTGAACGTGTCGTCCGCAATACACGGTTGGTTTACTGGCGACGTCATCTCCTATTTGGCTCATATATGCCGCAACAAAAGGTGACAAATAACTACCACTCCCTCCGTCCCGGAATATCTGACCCATTTACTAAAAAAAAGTGTCCCAAAATAACTGAGTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACTCTAATTAATATTACTTTCATCATTCTCAATTCAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAACCAAACTGGCTCAGGTATTCCGGGACGGAGGGAGTATAATCTTATCAATTTATTTGACTTATTCGTTATTACACCTTGAATGAAATTTTGGTTAAGCTAGCTGAACACTCGTCTCTGGGGATTGGTTGGATATGTATTCACATTGTTATAAAGAAGGTCATATCATATTTTTATATTAATTTATTTTAAAATTAGTTTTAATTTTGCCACAAGAGTATGTATATATACCCAACTATCTAAGAATTTACCTTTTGTCCAAAAAAAAAAATTACCTTTTGTTAACCTGCAATTTTGCCAAAACTTTGGGCCAGTAATACCATGTAACTCGGAAGAGATATGGTCTTTATACGTGAGGTGTTGTTACTATAGGCGTTAAATATATTAGAATTGCAAACATATCTCTAGTGTATTCTTTTGTTAGTAATCCTTAATATATTAAATTGATAAAAAAATATATTTGAGGATTAAATTGGCTATCATAAAACAAAGGGAAATGTTAACCAGTGCCCCGGGCACTGGTTAAGGCCTTTAAATGGTAACTTATCATGAAAATATGTGTAATCAATGCATCGGAAATCGAAATCCTTGACTTTTTTATAAAATTATTTCTTCTTTTAGAATCCTTAAAGAGTGCCCCGGGGGCACTCGTTAACAAGACCCTAAAACAAATTACGAGGACTACAATGACTAATAAAAATTACTACCATTTATGAATGTGTTTGTAGTTTCAATGCATTCAAGGATCAATGACATCTAGTTACACTTCCAAGTTTCGGAACAAAAATGTGATTTTCCCGTAAACAAGCCGTACTTGAAATGAAAATGATGTGATATGTTTACCAAACACTACACTACACTACGCTACATTTGTGTTTCTGTTTACTAATTTGTTGGATTGAAATATGTTTGTGTTGTGTGATGTCCCCAGTGAGTACGACGCCACACGTGCTTATGCTCTTTCCAAACTCGCCAACGTTTTCCACACTAACGAGCTTTCTCGCAGACTCAAGGTAACATATAATTTCACTACACTATCTATTCATTCATCTTTTATGGAGTATTTTATTTAATTTAATTAACTATAATAACATGCAATATCCATCTCGATCTCATCTACTATAGTATAGTAGTATCATCTACATATCATATCCTATCCATATTTAAAAGTGAAATTTGTTTGTTTGCTATGTCAGTAATCAAATGCCCCACGACTTCATTTGCTATAATTTAACCCCTGCCTGTTCTTGCTAATTATTTCTCCAGTTTATATAGTTTATTTTATTAATGAGCACGTATAAATAAATAAAATACTAGTAAATAATTTGGGGTATTAAATATGTGCAGGAAATGGATGCCAACGTGACTGTGAACTGCGTTCATCCGGGGGTCGTGAGAACCAGACTCACCAGAGAGCGTGAAGGCTTTCTTACAGGTTGGTAGGAACAATAACACTCTTGTTTTGGGTCAAAGTTTTGGTTCCTTTTTTATGTCTGCAGTGCAGCCGTTAATTGATTTCAGAATTTTCCTTTTCTATTCTAAAATCAAATGCAGATTTAGTTTTCTTCTTGGCTTCCAAGCTCTTAAAGACCATTCCCCAGGTAAATACAATACACTATAGTAGAACTTGTACTATAATATATATTCAATGTTCTCTATTTGTGCATGGGTAAAGTTTAATTTGGACCCATTGAAAAATTGGTCCAACTTGACCAATTAACTTAAACCATTGATCAAATAAGATGTATAGATTTTAGGCTTAATTGCACTTTTGGCCCCCTAACTTTTCAAAAGTTGCGGTTATGGTCCCCTAACTAATTTAAATACAAAACAGCCCCCTAAGTATTGATTCTTTGGCAGTTTTGGCCCCCTGGTCCATTTTTGACTTGGTCGTTGATGACGTGGCACCCAGACCCCTTATGTTTGGTGCCACGTGGATATTATTTATTTTTATTTTTTTTAAAAGCTTGCTGGCATTTTTAAATTGGGGAAGAAATTAAAAAAAAAAAATTAGTTTCTTCTTCTTCTCACGTTCCCTTCTTCTCCCACAACCACTAATCTTCCTCTCCCTTCTCCTTACTGACAACCTCCACCCTTCCGCCGTCATCGTCGTTGCTACCCCTTTTTCCTCTCCCTTCTCCTCACCGACCACCTCCACCCTTATCACCACTCTTCCTTCCATCGTCATCTGATCCGTCGCCGTAATAAGCCTCCACCCTTATCACCTCTTTTTCTTCGATTTGGAACTGCAAGGATGGGTCCGACTTGAACTGAGCCAGACTTACTTGTTCTTTCTCCCTCCACTTCGATTCCGCCTTGCTCACCTTCTTGATGTTGGATTCGGTTCTGGACTCCGTTCTTTCTTCTTCCTTCACCGATTTGTCTTCATTTCTTTAATTTTCAAGGTTGTTTGATGTTGTATAGATCGGCTTATGAATCAATTACAACTTCCTCTCCTTTCTTCTCTTCTGTTAGATTCGGTTACAAGCTTGTGTTTGTGAGTTCATTTCTAGTGACTCGGTTTGTATTGAACAGATTGAAAACGTGTGTGTGTTATGAACAACTTTGTAATGTCAGATGTATGCTCATTGTGAGCACCGAGTTTGTGATGAAGGTTGAGGTTTGGTACTGGTTGTATTTGAATGTTCTTGCTGGAAGAATGTTCTTGAGAAATTGATGATAATTTTTTGGAGTGTAGATCTTTGGATTTGCTGATTTTGGTTTGTTCTTCTGTTTATGAGGTTTGAAGGTTCATGATGTTCTTGAGGTTTTTTGGAAGAAAAAGTGTTTTTGATCCATATTTTGAGGCTGCCGCAAATTCATGATGTCCTTTTTTAATTTTCCATTTTTTTTTTAATTTCTCCAATTTCAAAATGCCAGCAAGCTTTTAAAAAAAAATAAAAAATAAATAATATCCACGTGGCACCAAACATAAGGGGTCTGGGTGCCACGTCATCAACGACCAAGTCAAAAATGGACCAAGGGGCCAAAACTGCCAAAGAATCAATACTTAGGGGGCTGTTTTGTATTTAAATTAGTTAGGGGGCCATAACCACAACTTTTGAAAAGATAGGGGGCCAAAAGTGCAATTAAGCCTAGATTTTATGGTAGTCTATCTGCACCATGAGTTGCTCTCTCACTCTTCCAGTATCTCTCTCTCCTTTGATACACCATCACCAACATTTTCTTTTCTTATTCTTGTGCTCATCTATTGAAATTTTTTTTGGACTTTACATTACCAAATTAACATCGATCCTCTAGATGTTTACTCACCAGCATCACCCCTCCATTCACTCCAACCACCACACTGATAAGCATGTTTCATTCCAAAATACCAACAACCATAACTCACAAACAATTTGAAGAGATTGAAGACATAAATATTTTTTGCATTAATTTAATTTGATTGAGTGTTGTTTGTGTTCAATGGCCTAAGATTTCAACCCAAAAGTTAGCTTGTTCTGATAAATAAATAAATAAAACTGGTGTTTTCTCCAACAATTCTTACGGTGCCATTGGTTTTTTCTACATCCATGTTTATCATTTTTGTGTCCACTCTGTTTATTATTTTTAACTATCACTATCAGAACCAAAATCTCAAATTAAATCAAGCTTCAGTTGTGGTTTAATTTTATTTATTTGTACACATAATGATGGATAATACAAAATTTTAAAAGGGTAAATTGAGATCTGAAAAACAATGGATGGCATGAACTATGAATTTGTGTATAAGTGTAAGTAACATAAAGGATCAGAGATTCTCCAGCAAGAAGAAGGTTGGAGAGAGAAAGTGGAGGAGGAAAAGGGTTTTGGAGAGAGAAAGAGAAGAATGAGAAAGAATAAAAATAAATATTCATGAGTAGAAGGTCCGATATAGTGGAGCGAATACATGGTAAAATCTATAAGCTTGTGTAATTTAATGGTCAGAAATCTTGATCCAATATGGACCAATACATGTATGGGTCCAAACTAAACGGCACCTTGTGCATGTTCTACGTAAACTTTGCTAGCTTTTACACACTCACGTCTCATTTATAAAGTTTTTTCTAGGTTACCTCTAAAAAATTGTCGGTAATTTACCCATCAATTAATCAAAATTAACTACTGGATCAGGAAATTTGTATACAAAGTGGAAGAATTTTAATTAACTTTAATTGGTTGATAGATAAATTACCTACAATTCTTCAAAGCTAGCATAAGCCTCCCCTTCAAAACAATATTTGAACCATTCTCTTCTCGTAATAATAAAAAAAGTCACGCATTGAGATGTATTACTTCTTTATTTTATTTTTTACCCTTATTTTATGTTCAATAAAAATACATGTATCCCACATATAAGATATTCTTGAAAAGAGAGCAAAGTGTGAGAGGTATTGAATGAATAAAAGTGTATACTTTGAATTTGTGATGACAAATATATTTTATAGGCGTATAAGTAGAGTCGTTGAATGAGAGGTTGCTACAACATGCGAATACATTATTGGTTGTATGCATTTTTTATTTTTATTTTTGCATTAAAAGATTCTGTCCATTAATTTGTTGTTGTGTTTTTCTTTTGAGCTCTGATTTAATTACCGCAAATAAACTTATATACAGGCAGCTGCAACAACATGTTATGTGGCAACTCACCCAAGGCTCGTCAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAACCTCAACTTCCAAATTGGGATCCAACATAACTGAAGCTTCAAGGTTATGGGCCGTTTCCGAATTAATGATTTCTAAGGGTCCAAAAGCTGCCTTTGACCTAATTAATAACCTTGAATTTTGA
Protein sequence

>MS.gene55839.t1

MLETVKYLIGSAGPSGFGSKSTAEQVTETCGDLRSITAIITGGTSGIGAETARVLAKRGARVILPARSMKNAEETRGRIVTECPEAEIIVMALDLSSLNSVTNFVTRFHSIGFPLNLLINNAGKFAEEHAISEDGVEMTFATNYLGHFLLTKMLMKKMVETAKETGIQGRIVNVSSAIHGWFTGDVISYLAHICRNKSEYDATRAYALSKLANVFHTNELSRRLKEMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCYVATHPRLVNVSGKYFADCNETSTSKLGSNITEASRLWAVSELMISKGPKAAFDLINNLEF