Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49121.t1 | RHN81782.1 | 98.4 | 315 | 5 | 0 | 1 | 315 | 42 | 356 | 1.00E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49121.t1 | Q6RVV4 | 92.7 | 316 | 22 | 1 | 1 | 315 | 1 | 316 | 6.7e-165 | 581.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49121.t1 | A0A072W040 | 98.4 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 7.4e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene49121 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene49121 | 0.832488 | 9.19E-56 | -1.69E-46 |
| MS.gene050133 | MS.gene49121 | -0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene49121 | 0.806198 | 9.24E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene49121 | 0.828421 | 9.08E-55 | -1.69E-46 |
| MS.gene050400 | MS.gene49121 | 0.838891 | 2.20E-57 | -1.69E-46 |
| MS.gene050426 | MS.gene49121 | -0.867055 | 1.81E-65 | -1.69E-46 |
| MS.gene050464 | MS.gene49121 | 0.82579 | 3.87E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene49121 | 0.816558 | 5.20E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene49121 | 0.844941 | 5.53E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene49121 | 0.907164 | 6.81E-81 | -1.69E-46 |
| MS.gene050971 | MS.gene49121 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene49121 | 0.860354 | 2.19E-63 | -1.69E-46 |
| MS.gene051255 | MS.gene49121 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene49121 | 0.824085 | 9.77E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene49121 | 0.849519 | 3.07E-60 | -1.69E-46 |
| MS.gene051521 | MS.gene49121 | 0.815553 | 8.72E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene49121 | 0.893502 | 5.92E-75 | -1.69E-46 |
| MS.gene051582 | MS.gene49121 | 0.839834 | 1.25E-57 | -1.69E-46 |
| MS.gene051588 | MS.gene49121 | 0.821643 | 3.62E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene49121 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene052011 | MS.gene49121 | -0.883839 | 3.19E-71 | -1.69E-46 |
| MS.gene052077 | MS.gene49121 | 0.834238 | 3.36E-56 | -1.69E-46 |
| MS.gene052128 | MS.gene49121 | -0.805185 | 1.51E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene49121 | 0.838005 | 3.72E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene49121 | 0.839965 | 1.16E-57 | -1.69E-46 |
| MS.gene052136 | MS.gene49121 | 0.834147 | 3.55E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene49121 | 0.840909 | 6.55E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene49121 | 0.843697 | 1.19E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene49121 | 0.814637 | 1.39E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene49121 | 0.836905 | 7.11E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene49121 | 0.857045 | 2.13E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene49121 | 0.869516 | 2.92E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene49121 | 0.820945 | 5.24E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene49121 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene49121 | 0.828083 | 1.10E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene49121 | 0.82803 | 1.13E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene49121 | 0.822142 | 2.78E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene49121 | 0.829537 | 4.87E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene49121 | 0.852142 | 5.60E-61 | -1.69E-46 |
| MS.gene052999 | MS.gene49121 | 0.813991 | 1.93E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene49121 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene49121 | 0.866423 | 2.88E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene49121 | 0.824495 | 7.82E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene49121 | 0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene49121 | 0.815147 | 1.07E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene49121 | 0.814332 | 1.63E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene49121 | 0.804928 | 1.71E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene49121 | 0.826519 | 2.60E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene49121 | 0.851003 | 1.18E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene49121 | 0.825931 | 3.58E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene49121 | 0.882113 | 1.37E-70 | -1.69E-46 |
| MS.gene054719 | MS.gene49121 | 0.859562 | 3.80E-63 | -1.69E-46 |
| MS.gene054920 | MS.gene49121 | 0.813668 | 2.28E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene49121 | 0.874555 | 6.16E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene49121 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene49121 | 0.886821 | 2.45E-72 | -1.69E-46 |
| MS.gene055539 | MS.gene49121 | 0.855976 | 4.40E-62 | -1.69E-46 |
| MS.gene05553 | MS.gene49121 | 0.873706 | 1.19E-67 | -1.69E-46 |
| MS.gene055564 | MS.gene49121 | 0.838375 | 2.98E-57 | -1.69E-46 |
| MS.gene05556 | MS.gene49121 | 0.838855 | 2.24E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene49121 | 0.80902 | 2.33E-50 | -1.69E-46 |
| MS.gene055666 | MS.gene49121 | 0.815111 | 1.09E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene49121 | 0.86222 | 5.91E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene49121 | 0.868644 | 5.60E-66 | -1.69E-46 |
| MS.gene055859 | MS.gene49121 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene49121 | 0.838982 | 2.08E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene49121 | 0.844897 | 5.69E-59 | -1.69E-46 |
| MS.gene05594 | MS.gene49121 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene49121 | 0.808257 | 3.39E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene49121 | 0.869598 | 2.75E-66 | -1.69E-46 |
| MS.gene056422 | MS.gene49121 | 0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene49121 | 0.853903 | 1.76E-61 | -1.69E-46 |
| MS.gene056514 | MS.gene49121 | 0.856557 | 2.97E-62 | -1.69E-46 |
| MS.gene056659 | MS.gene49121 | 0.831193 | 1.92E-55 | -1.69E-46 |
| MS.gene05666 | MS.gene49121 | 0.80069 | 1.28E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene49121 | 0.850222 | 1.95E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene49121 | 0.818434 | 1.96E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene49121 | 0.833803 | 4.32E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene49121 | -0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene49121 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene49121 | 0.818187 | 2.23E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene49121 | 0.820393 | 7.02E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene49121 | 0.869768 | 2.42E-66 | -1.69E-46 |
| MS.gene057396 | MS.gene49121 | 0.872072 | 4.21E-67 | -1.69E-46 |
| MS.gene057476 | MS.gene49121 | 0.837543 | 4.89E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene49121 | 0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene49121 | 0.832323 | 1.01E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene49121 | 0.839005 | 2.05E-57 | -1.69E-46 |
| MS.gene057825 | MS.gene49121 | 0.806131 | 9.54E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene49121 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene49121 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene49121 | 0.840468 | 8.54E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene49121 | 0.818078 | 2.36E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene49121 | 0.802366 | 5.81E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene49121 | 0.810764 | 9.80E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene49121 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene49121 | 0.840381 | 9.00E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene49121 | 0.896085 | 5.17E-76 | -1.69E-46 |
| MS.gene05886 | MS.gene49121 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene49121 | 0.801919 | 7.17E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene49121 | 0.849639 | 2.84E-60 | -1.69E-46 |
| MS.gene058949 | MS.gene49121 | 0.800736 | 1.25E-48 | -1.69E-46 |
| MS.gene058995 | MS.gene49121 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene49121 | 0.856623 | 2.84E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene49121 | 0.846879 | 1.65E-59 | -1.69E-46 |
| MS.gene059082 | MS.gene49121 | 0.827111 | 1.87E-54 | -1.69E-46 |
| MS.gene059141 | MS.gene49121 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene49121 | 0.817404 | 3.36E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene49121 | 0.814043 | 1.88E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene49121 | 0.888396 | 6.13E-73 | -1.69E-46 |
| MS.gene059462 | MS.gene49121 | 0.83287 | 7.39E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene49121 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene49121 | 0.816137 | 6.46E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene49121 | 0.849407 | 3.30E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene49121 | 0.835491 | 1.63E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene49121 | 0.839055 | 1.99E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene49121 | 0.829358 | 5.38E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene49121 | 0.804183 | 2.44E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene49121 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene059933 | MS.gene49121 | 0.827801 | 1.28E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene49121 | 0.825719 | 4.02E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene49121 | 0.873324 | 1.61E-67 | -1.69E-46 |
| MS.gene060804 | MS.gene49121 | 0.800396 | 1.47E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene49121 | 0.837364 | 5.43E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene49121 | 0.854118 | 1.52E-61 | -1.69E-46 |
| MS.gene060986 | MS.gene49121 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene49121 | 0.806493 | 8.01E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene49121 | -0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene49121 | 0.965943 | 2.89E-125 | -1.69E-46 |
| MS.gene061159 | MS.gene49121 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene061214 | MS.gene49121 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene061215 | MS.gene49121 | 0.803397 | 3.55E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49121.t1 | MTR_1g100305 | 98.413 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 0.0 | 643 |
| MS.gene49121.t1 | MTR_1g100315 | 82.857 | 315 | 54 | 0 | 1 | 315 | 1 | 315 | 0.0 | 556 |
| MS.gene49121.t1 | MTR_1g100335 | 80.317 | 315 | 62 | 0 | 1 | 315 | 1 | 315 | 0.0 | 531 |
| MS.gene49121.t1 | MTR_1g100395 | 80.000 | 315 | 63 | 0 | 1 | 315 | 1 | 315 | 0.0 | 531 |
| MS.gene49121.t1 | MTR_8g098415 | 69.206 | 315 | 97 | 0 | 1 | 315 | 1 | 315 | 8.43e-165 | 461 |
| MS.gene49121.t1 | MTR_8g098415 | 70.130 | 308 | 92 | 0 | 1 | 308 | 1 | 308 | 2.99e-163 | 457 |
| MS.gene49121.t1 | MTR_6g053550 | 69.381 | 307 | 91 | 1 | 10 | 313 | 18 | 324 | 2.20e-156 | 440 |
| MS.gene49121.t1 | MTR_1g100335 | 80.894 | 246 | 47 | 0 | 1 | 246 | 1 | 246 | 8.37e-148 | 416 |
| MS.gene49121.t1 | MTR_1g100335 | 80.894 | 246 | 47 | 0 | 1 | 246 | 1 | 246 | 1.05e-147 | 416 |
| MS.gene49121.t1 | MTR_8g098415 | 68.992 | 258 | 80 | 0 | 58 | 315 | 1 | 258 | 4.18e-134 | 381 |
| MS.gene49121.t1 | MTR_1g068970 | 58.689 | 305 | 126 | 0 | 8 | 312 | 13 | 317 | 3.79e-131 | 376 |
| MS.gene49121.t1 | MTR_6g053600 | 69.847 | 262 | 76 | 1 | 10 | 268 | 4 | 265 | 1.11e-130 | 374 |
| MS.gene49121.t1 | MTR_7g099850 | 58.170 | 306 | 127 | 1 | 8 | 312 | 13 | 318 | 2.42e-128 | 369 |
| MS.gene49121.t1 | MTR_8g098415 | 72.603 | 219 | 60 | 0 | 1 | 219 | 1 | 219 | 5.68e-116 | 334 |
| MS.gene49121.t1 | MTR_1g068970 | 56.000 | 250 | 110 | 0 | 63 | 312 | 1 | 250 | 4.26e-102 | 300 |
| MS.gene49121.t1 | MTR_3g077410 | 44.231 | 312 | 170 | 2 | 8 | 315 | 13 | 324 | 8.04e-90 | 271 |
| MS.gene49121.t1 | MTR_4g105310 | 44.231 | 312 | 170 | 2 | 8 | 315 | 24 | 335 | 2.70e-84 | 258 |
| MS.gene49121.t1 | MTR_8g099995 | 43.934 | 305 | 167 | 3 | 8 | 308 | 13 | 317 | 5.32e-82 | 251 |
| MS.gene49121.t1 | MTR_4g105310 | 46.502 | 243 | 126 | 2 | 8 | 246 | 24 | 266 | 2.38e-66 | 209 |
| MS.gene49121.t1 | MTR_1g100345 | 74.324 | 74 | 19 | 0 | 33 | 106 | 4 | 77 | 5.27e-31 | 112 |
| MS.gene49121.t1 | MTR_6g081020 | 36.328 | 256 | 145 | 8 | 30 | 275 | 62 | 309 | 1.20e-28 | 114 |
| MS.gene49121.t1 | MTR_6g041980 | 29.323 | 266 | 166 | 9 | 25 | 285 | 62 | 310 | 4.64e-21 | 92.4 |
| MS.gene49121.t1 | MTR_2g079710 | 29.393 | 313 | 186 | 10 | 31 | 312 | 88 | 396 | 8.95e-21 | 92.0 |
| MS.gene49121.t1 | MTR_3g091070 | 29.508 | 305 | 161 | 12 | 32 | 312 | 43 | 317 | 6.46e-20 | 89.0 |
| MS.gene49121.t1 | MTR_6g453040 | 30.719 | 306 | 174 | 12 | 32 | 312 | 43 | 335 | 6.90e-19 | 86.3 |
| MS.gene49121.t1 | MTR_3g009190 | 30.164 | 305 | 177 | 10 | 32 | 312 | 65 | 357 | 1.21e-18 | 85.9 |
| MS.gene49121.t1 | MTR_3g009190 | 30.164 | 305 | 177 | 10 | 32 | 312 | 83 | 375 | 1.69e-18 | 85.5 |
| MS.gene49121.t1 | MTR_6g041980 | 29.032 | 217 | 137 | 6 | 4 | 216 | 43 | 246 | 1.13e-16 | 79.0 |
| MS.gene49121.t1 | MTR_3g009190 | 29.568 | 301 | 182 | 9 | 33 | 312 | 65 | 356 | 2.35e-16 | 79.3 |
| MS.gene49121.t1 | MTR_8g022500 | 38.938 | 113 | 44 | 2 | 34 | 146 | 431 | 518 | 1.67e-14 | 74.3 |
| MS.gene49121.t1 | MTR_6g453040 | 32.850 | 207 | 110 | 7 | 32 | 220 | 65 | 260 | 6.75e-12 | 65.5 |
| MS.gene49121.t1 | MTR_3g098470 | 27.740 | 292 | 150 | 12 | 32 | 285 | 37 | 305 | 8.54e-12 | 65.1 |
| MS.gene49121.t1 | MTR_6g453040 | 35.948 | 153 | 80 | 5 | 32 | 174 | 65 | 209 | 9.96e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49121.t1 | AT4G23430 | 71.474 | 312 | 88 | 1 | 1 | 311 | 1 | 312 | 3.58e-167 | 468 |
| MS.gene49121.t1 | AT4G23420 | 71.795 | 312 | 87 | 1 | 1 | 311 | 1 | 312 | 6.93e-167 | 466 |
| MS.gene49121.t1 | AT4G23420 | 71.795 | 312 | 87 | 1 | 1 | 311 | 1 | 312 | 6.93e-167 | 466 |
| MS.gene49121.t1 | AT4G23430 | 71.154 | 312 | 87 | 2 | 1 | 311 | 1 | 310 | 1.89e-164 | 460 |
| MS.gene49121.t1 | AT4G23420 | 70.968 | 310 | 89 | 1 | 3 | 311 | 20 | 329 | 4.16e-163 | 457 |
| MS.gene49121.t1 | AT4G11410 | 67.302 | 315 | 103 | 0 | 1 | 315 | 1 | 315 | 7.07e-159 | 446 |
| MS.gene49121.t1 | AT4G23430 | 68.910 | 312 | 86 | 2 | 1 | 311 | 1 | 302 | 2.42e-157 | 442 |
| MS.gene49121.t1 | AT4G23430 | 68.590 | 312 | 85 | 3 | 1 | 311 | 1 | 300 | 1.19e-154 | 435 |
| MS.gene49121.t1 | AT4G23420 | 72.137 | 262 | 72 | 1 | 1 | 261 | 1 | 262 | 1.39e-138 | 393 |
| MS.gene49121.t1 | AT4G23420 | 76.471 | 238 | 56 | 0 | 1 | 238 | 1 | 238 | 4.43e-135 | 384 |
| MS.gene49121.t1 | AT4G11410 | 70.612 | 245 | 72 | 0 | 1 | 245 | 1 | 245 | 9.94e-126 | 360 |
| MS.gene49121.t1 | AT5G02540 | 59.609 | 307 | 124 | 0 | 6 | 312 | 10 | 316 | 1.80e-125 | 362 |
| MS.gene49121.t1 | AT2G37540 | 56.352 | 307 | 134 | 0 | 6 | 312 | 10 | 316 | 6.50e-125 | 360 |
| MS.gene49121.t1 | AT2G37540 | 59.746 | 236 | 95 | 0 | 6 | 241 | 10 | 245 | 1.90e-100 | 296 |
| MS.gene49121.t1 | AT4G24050 | 44.872 | 312 | 165 | 4 | 8 | 314 | 13 | 322 | 1.32e-84 | 258 |
| MS.gene49121.t1 | AT5G50130 | 45.955 | 309 | 163 | 3 | 8 | 312 | 13 | 321 | 2.95e-84 | 257 |
| MS.gene49121.t1 | AT5G50130 | 45.196 | 281 | 153 | 1 | 33 | 312 | 7 | 287 | 1.13e-77 | 239 |
| MS.gene49121.t1 | AT5G50130 | 45.390 | 282 | 152 | 2 | 33 | 312 | 7 | 288 | 4.30e-77 | 238 |
| MS.gene49121.t1 | AT1G64590 | 44.147 | 299 | 164 | 2 | 17 | 312 | 22 | 320 | 3.86e-72 | 226 |
| MS.gene49121.t1 | AT5G50130 | 45.283 | 265 | 141 | 2 | 8 | 268 | 13 | 277 | 2.14e-70 | 221 |
| MS.gene49121.t1 | AT5G50130 | 45.489 | 266 | 140 | 3 | 8 | 268 | 13 | 278 | 9.38e-70 | 220 |
| MS.gene49121.t1 | AT5G50130 | 48.718 | 234 | 118 | 1 | 8 | 239 | 13 | 246 | 6.14e-69 | 216 |
| MS.gene49121.t1 | AT5G50130 | 48.936 | 235 | 117 | 2 | 8 | 239 | 13 | 247 | 2.79e-68 | 214 |
| MS.gene49121.t1 | AT4G24050 | 43.182 | 264 | 145 | 3 | 8 | 268 | 13 | 274 | 8.28e-68 | 213 |
| MS.gene49121.t1 | AT5G50130 | 44.726 | 237 | 129 | 1 | 34 | 268 | 8 | 244 | 2.72e-63 | 202 |
| MS.gene49121.t1 | AT5G50130 | 44.958 | 238 | 128 | 2 | 34 | 268 | 8 | 245 | 9.70e-63 | 201 |
| MS.gene49121.t1 | AT4G27760 | 31.373 | 306 | 175 | 9 | 30 | 312 | 58 | 351 | 2.15e-31 | 121 |
| MS.gene49121.t1 | AT5G53090 | 32.558 | 301 | 178 | 8 | 30 | 312 | 57 | 350 | 2.45e-29 | 115 |
| MS.gene49121.t1 | AT5G53100 | 31.475 | 305 | 179 | 9 | 30 | 312 | 45 | 341 | 6.19e-28 | 111 |
| MS.gene49121.t1 | AT5G54190 | 28.617 | 311 | 187 | 10 | 33 | 312 | 96 | 402 | 1.90e-25 | 105 |
| MS.gene49121.t1 | AT1G03630 | 31.410 | 312 | 180 | 12 | 31 | 312 | 91 | 398 | 4.67e-25 | 104 |
| MS.gene49121.t1 | AT1G03630 | 31.410 | 312 | 180 | 12 | 31 | 312 | 89 | 396 | 4.76e-25 | 104 |
| MS.gene49121.t1 | AT5G04070 | 28.716 | 296 | 183 | 7 | 32 | 308 | 61 | 347 | 8.81e-24 | 100 |
| MS.gene49121.t1 | AT4G09750 | 28.369 | 282 | 188 | 6 | 4 | 285 | 20 | 287 | 7.22e-23 | 97.1 |
| MS.gene49121.t1 | AT4G27440 | 29.582 | 311 | 184 | 10 | 33 | 312 | 92 | 398 | 2.13e-22 | 97.1 |
| MS.gene49121.t1 | AT4G27440 | 29.582 | 311 | 184 | 10 | 33 | 312 | 92 | 398 | 2.13e-22 | 97.1 |
| MS.gene49121.t1 | AT5G15940 | 27.907 | 301 | 187 | 12 | 32 | 311 | 62 | 353 | 4.31e-20 | 89.7 |
| MS.gene49121.t1 | AT5G15940 | 27.907 | 301 | 187 | 12 | 32 | 311 | 63 | 354 | 4.44e-20 | 89.7 |
| MS.gene49121.t1 | AT5G15940 | 27.907 | 301 | 187 | 12 | 32 | 311 | 63 | 354 | 4.44e-20 | 89.7 |
| MS.gene49121.t1 | AT5G54190 | 25.614 | 285 | 178 | 9 | 58 | 312 | 1 | 281 | 1.68e-17 | 81.6 |
| MS.gene49121.t1 | AT5G15940 | 28.700 | 223 | 140 | 7 | 32 | 240 | 63 | 280 | 2.81e-16 | 78.6 |
| MS.gene49121.t1 | AT5G61830 | 26.877 | 253 | 142 | 9 | 32 | 269 | 39 | 263 | 6.86e-12 | 65.5 |
| MS.gene49121.t1 | AT5G61830 | 26.877 | 253 | 142 | 9 | 32 | 269 | 39 | 263 | 6.86e-12 | 65.5 |
Find 72 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCGGTGTCCATGTGATTA+TGG | 0.226322 | 1.3:-68963343 | MS.gene49121:CDS |
| TTCAGCAAGAAAGGTGTTTC+TGG | 0.229466 | 1.3:-68964698 | MS.gene49121:CDS |
| GGTCTCACTGCCATTGTTAC+TGG | 0.236378 | 1.3:-68964623 | MS.gene49121:intron |
| CTGCAGTTCAATGTTGTCTT+TGG | 0.239372 | 1.3:+68962914 | None:intergenic |
| AAGAAATAATGCAGGAATTA+TGG | 0.267594 | 1.3:-68962955 | MS.gene49121:CDS |
| CTGGGATTTCAGCATCAATT+TGG | 0.274620 | 1.3:-68959585 | MS.gene49121:CDS |
| GCATCTGAGTATAATTCTTC+TGG | 0.288049 | 1.3:-68963201 | MS.gene49121:CDS |
| CGCGGTGTCCATGTGATTAT+GGG | 0.296114 | 1.3:-68963342 | MS.gene49121:CDS |
| ACATGGAAGGGACGCTGATT+TGG | 0.331121 | 1.3:-68959618 | MS.gene49121:CDS |
| CACTAACTCCCTTCACTTGT+GGG | 0.364956 | 1.3:+68959681 | None:intergenic |
| GGAGTTAGATCTTAGCTCAT+TGG | 0.400097 | 1.3:-68963241 | MS.gene49121:CDS |
| CTGATTTGGCAAAGAAACTC+TGG | 0.413553 | 1.3:-68959604 | MS.gene49121:CDS |
| TTACCACATACCTATGTGAT+TGG | 0.416556 | 1.3:+68962884 | None:intergenic |
| TACAGCAGATGGGGTGCATA+TGG | 0.428773 | 1.3:-68962407 | MS.gene49121:CDS |
| CCACTAACTCCCTTCACTTG+TGG | 0.432406 | 1.3:+68959680 | None:intergenic |
| CTCCATCATGATCAGGAAGA+TGG | 0.437998 | 1.3:-68961617 | MS.gene49121:intron |
| ACAGGAGCATCCAGCGGCAT+TGG | 0.439266 | 1.3:-68963393 | MS.gene49121:intron |
| AGATTGGTGACAATTGTTCC+TGG | 0.444579 | 1.3:+68961566 | None:intergenic |
| CCACAAGTGAAGGGAGTTAG+TGG | 0.452564 | 1.3:-68959680 | MS.gene49121:CDS |
| AAGGTGTTTCTGGTTTCTCA+TGG | 0.455178 | 1.3:-68964688 | MS.gene49121:CDS |
| GAAACACCTTTCTTGCTGAA+TGG | 0.471111 | 1.3:+68964701 | None:intergenic |
| AGTCTCAGCGCCAATGCCGC+TGG | 0.472069 | 1.3:+68963383 | None:intergenic |
| CCTTGAGATGCTTTGTAAGT+TGG | 0.481616 | 1.3:+68962351 | None:intergenic |
| CTTTATACAGTTACAGCAGA+TGG | 0.483123 | 1.3:-68962418 | MS.gene49121:intron |
| CTCTGCTAAACTTGATGCCA+TGG | 0.490137 | 1.3:-68963262 | MS.gene49121:CDS |
| ATAAAATCAATGACGAATCA+AGG | 0.490214 | 1.3:-68962518 | MS.gene49121:intron |
| CAGGTCTAATAAATGTGGTT+GGG | 0.491530 | 1.3:-68960334 | MS.gene49121:CDS |
| TCCATCATGATCAGGAAGAT+GGG | 0.501810 | 1.3:-68961616 | MS.gene49121:intron |
| TTTATACAGTTACAGCAGAT+GGG | 0.509343 | 1.3:-68962417 | MS.gene49121:intron |
| GCAGGTCTAATAAATGTGGT+TGG | 0.514107 | 1.3:-68960335 | MS.gene49121:intron |
| CCACATACCTATGTGATTGG+TGG | 0.516243 | 1.3:+68962887 | None:intergenic |
| ATGTGGCCATTCAGCAAGAA+AGG | 0.533159 | 1.3:-68964707 | MS.gene49121:CDS |
| TTGTCTTTGGACAAACTGAA+AGG | 0.538568 | 1.3:+68962927 | None:intergenic |
| GTAATTGTAAGAAATAATGC+AGG | 0.539047 | 1.3:-68962963 | MS.gene49121:intron |
| TGATTTGGCAAAGAAACTCT+GGG | 0.543852 | 1.3:-68959603 | MS.gene49121:CDS |
| ATGTCGCCTCAGAGGCTCAC+AGG | 0.545694 | 1.3:-68962569 | MS.gene49121:CDS |
| GAGATGCTTTGTAAGTTGGT+TGG | 0.546258 | 1.3:+68962355 | None:intergenic |
| ACTGCAAATTCTCTTCATCC+AGG | 0.546611 | 1.3:-68961584 | MS.gene49121:CDS |
| CGTTCACTGCACTGTTATGT+CGG | 0.547282 | 1.3:+68961540 | None:intergenic |
| AGCATTGCACCCACAAGTGA+AGG | 0.549189 | 1.3:-68959690 | MS.gene49121:CDS |
| ACTCATGGAATCGATGCTAC+TGG | 0.550512 | 1.3:-68964644 | MS.gene49121:CDS |
| ACTGCTGAACAAGTTACTCA+TGG | 0.551436 | 1.3:-68964659 | MS.gene49121:CDS |
| TGTCTTTGGACAAACTGAAA+GGG | 0.554943 | 1.3:+68962928 | None:intergenic |
| AATCAGCGTCCCTTCCATGT+GGG | 0.555356 | 1.3:+68959621 | None:intergenic |
| GCTCGTGTGCTTGCTTTGCG+CGG | 0.559578 | 1.3:-68963360 | MS.gene49121:CDS |
| ACTGTTATGTCGGAAAAGAT+TGG | 0.564967 | 1.3:+68961550 | None:intergenic |
| ACACGCAAAAGTAAGAAAGA+AGG | 0.568031 | 1.3:-68962603 | MS.gene49121:CDS |
| CAAAACAACCCCACATGGAA+GGG | 0.582561 | 1.3:-68959630 | MS.gene49121:CDS |
| ACAAAACAACCCCACATGGA+AGG | 0.586260 | 1.3:-68959631 | MS.gene49121:CDS |
| TGTCAAAGAAACAATACTCA+AGG | 0.594611 | 1.3:-68963292 | MS.gene49121:CDS |
| CACAGGTTCGCATATTCTGA+AGG | 0.595062 | 1.3:-68962552 | MS.gene49121:CDS |
| ATCAGCGTCCCTTCCATGTG+GGG | 0.601486 | 1.3:+68959622 | None:intergenic |
| AAATCAGCGTCCCTTCCATG+TGG | 0.606536 | 1.3:+68959620 | None:intergenic |
| TCATGATCAGGAAGATGGGG+TGG | 0.613846 | 1.3:-68961612 | MS.gene49121:intron |
| CAGTTTGCCACCAATCACAT+AGG | 0.614534 | 1.3:-68962894 | MS.gene49121:intron |
| TCTTACATCAAGATGTTCAG+CGG | 0.618040 | 1.3:+68963174 | None:intergenic |
| TTATACAGTTACAGCAGATG+GGG | 0.618136 | 1.3:-68962416 | MS.gene49121:intron |
| GCATTGCACCCACAAGTGAA+GGG | 0.624705 | 1.3:-68959689 | MS.gene49121:CDS |
| TGCGAACCTGTGAGCCTCTG+AGG | 0.625555 | 1.3:+68962563 | None:intergenic |
| CCATCATGATCAGGAAGATG+GGG | 0.633051 | 1.3:-68961615 | MS.gene49121:intron |
| CCAACTTACAAAGCATCTCA+AGG | 0.636423 | 1.3:-68962351 | MS.gene49121:intron |
| GTGTACAAAACAACCCCACA+TGG | 0.637066 | 1.3:-68959635 | MS.gene49121:CDS |
| TTATGCAGGTCTAATAAATG+TGG | 0.639665 | 1.3:-68960339 | MS.gene49121:intron |
| TGAGCTAAGATCTAACTCCA+TGG | 0.641141 | 1.3:+68963245 | None:intergenic |
| TTCTCACACCCATAATCACA+TGG | 0.642138 | 1.3:+68963334 | None:intergenic |
| CGACATAACAGTGCAGTGAA+CGG | 0.644050 | 1.3:-68961539 | MS.gene49121:intron |
| AATTGTTAATGTCGCCTCAG+AGG | 0.651795 | 1.3:-68962577 | MS.gene49121:CDS |
| ATGGCATCAAGTTTAGCAGA+GGG | 0.654356 | 1.3:+68963264 | None:intergenic |
| TATGGACCAACCAGTAACAA+TGG | 0.654679 | 1.3:+68964613 | None:intergenic |
| GATTATGGGTGTGAGAAACA+TGG | 0.655252 | 1.3:-68963328 | MS.gene49121:CDS |
| CATGGCATCAAGTTTAGCAG+AGG | 0.683203 | 1.3:+68963263 | None:intergenic |
| GTGGTAACAGGAGCATCCAG+CGG | 0.686163 | 1.3:-68963399 | MS.gene49121:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATTATTTAACCTAT+AGG | - | chr1.3:68964461-68964480 | MS.gene49121:intron | 10.0% |
| !! | AAAAAAAAAATTCAGTTGAT+TGG | + | chr1.3:68961450-68961469 | None:intergenic | 15.0% |
| !! | AACGTTTATGAATATATTAT+AGG | + | chr1.3:68960076-68960095 | None:intergenic | 15.0% |
| !! | AATATACAACTAAAACAAAT+AGG | + | chr1.3:68963703-68963722 | None:intergenic | 15.0% |
| !! | ATTAAATCTAATCATATCTT+TGG | - | chr1.3:68962444-68962463 | MS.gene49121:intron | 15.0% |
| !! | CAAATGATTATAATACAAAT+TGG | + | chr1.3:68962522-68962541 | None:intergenic | 15.0% |
| !! | TACTAAAAAAAACTTATACA+AGG | + | chr1.3:68964490-68964509 | None:intergenic | 15.0% |
| !! | TGATAACTTATATTGAATTA+TGG | + | chr1.3:68961986-68962005 | None:intergenic | 15.0% |
| !! | AATTGCTTAAAATGTAATCA+AGG | + | chr1.3:68961816-68961835 | None:intergenic | 20.0% |
| !! | AGACCATTAATTTAATCAAT+TGG | - | chr1.3:68963599-68963618 | MS.gene49121:intron | 20.0% |
| !! | ATAATTAAGAAAGAAGAAAC+AGG | + | chr1.3:68959698-68959717 | None:intergenic | 20.0% |
| !! | ATATCAAAGATAGATTAATG+TGG | + | chr1.3:68962627-68962646 | None:intergenic | 20.0% |
| !! | ATATGCATAAAAAACTACTA+GGG | + | chr1.3:68960133-68960152 | None:intergenic | 20.0% |
| !! | ATTAATCATGATTTATCTCT+TGG | - | chr1.3:68960595-68960614 | MS.gene49121:intron | 20.0% |
| !! | TAGCCAATTGATTAAATTAA+TGG | + | chr1.3:68963605-68963624 | None:intergenic | 20.0% |
| !! | TTCTTAATTATTTCCCAAAA+GGG | - | chr1.3:68959707-68959726 | MS.gene49121:CDS | 20.0% |
| !! | TTTAGTGCTATATATTACAA+TGG | + | chr1.3:68963812-68963831 | None:intergenic | 20.0% |
| !! | TTTCTAATACTTTCTTTCAT+AGG | + | chr1.3:68964245-68964264 | None:intergenic | 20.0% |
| !! | TTTCTTAATTATTTCCCAAA+AGG | - | chr1.3:68959706-68959725 | MS.gene49121:CDS | 20.0% |
| !!! | ACTCCAATTTTATTAATGTA+GGG | - | chr1.3:68964544-68964563 | MS.gene49121:intron | 20.0% |
| !!! | AGTTTTTTATGCATATCTTT+TGG | - | chr1.3:68960137-68960156 | MS.gene49121:intron | 20.0% |
| !!! | ATGAATTATTTTAATTACGC+AGG | - | chr1.3:68961606-68961625 | MS.gene49121:intron | 20.0% |
| !!! | GTTTTGGTTGATTAATAAAA+AGG | - | chr1.3:68962030-68962049 | MS.gene49121:intron | 20.0% |
| !!! | TAAAAAGATTTTCGTGTAAA+CGG | + | chr1.3:68959866-68959885 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTATGCAGTTTC+TGG | + | chr1.3:68960182-68960201 | None:intergenic | 20.0% |
| !!! | TACTCCAATTTTATTAATGT+AGG | - | chr1.3:68964543-68964562 | MS.gene49121:intron | 20.0% |
| !!! | TATATTTTGTATTTAGCTGT+TGG | - | chr1.3:68963717-68963736 | MS.gene49121:intron | 20.0% |
| !!! | TCATCAAATGAATTTTCAAA+AGG | + | chr1.3:68961473-68961492 | None:intergenic | 20.0% |
| !!! | TTGATTACATTTTAAGCAAT+TGG | - | chr1.3:68961815-68961834 | MS.gene49121:intron | 20.0% |
| ! | AAAGTGGAAAAAATTAGAGA+AGG | - | chr1.3:68963569-68963588 | MS.gene49121:intron | 25.0% |
| ! | AAATAAGCCAAAAACAACTT+AGG | + | chr1.3:68962216-68962235 | None:intergenic | 25.0% |
| ! | AAATTGGATAGAGTCAAATA+TGG | + | chr1.3:68960299-68960318 | None:intergenic | 25.0% |
| ! | AAGAAATAATGCAGGAATTA+TGG | - | chr1.3:68961323-68961342 | MS.gene49121:intron | 25.0% |
| ! | AATAAGCCAAAAACAACTTA+GGG | + | chr1.3:68962215-68962234 | None:intergenic | 25.0% |
| ! | AATATAAGCAATATTGTTCG+AGG | + | chr1.3:68964408-68964427 | None:intergenic | 25.0% |
| ! | AATTGGATAGAGTCAAATAT+GGG | + | chr1.3:68960298-68960317 | None:intergenic | 25.0% |
| ! | ATAAAATCAATGACGAATCA+AGG | - | chr1.3:68961760-68961779 | MS.gene49121:intron | 25.0% |
| ! | ATGTTGAATATGAATTATGC+AGG | - | chr1.3:68962800-68962819 | MS.gene49121:intron | 25.0% |
| ! | ATTTATGGTGAAACAATTCT+TGG | + | chr1.3:68960411-68960430 | None:intergenic | 25.0% |
| ! | CGAACAATATTGCTTATATT+AGG | - | chr1.3:68964408-68964427 | MS.gene49121:intron | 25.0% |
| ! | CTAAAACAAATAGGAGTTTA+TGG | + | chr1.3:68963694-68963713 | None:intergenic | 25.0% |
| ! | CTCTGATATGTAAATTCAAA+CGG | - | chr1.3:68959788-68959807 | MS.gene49121:intron | 25.0% |
| ! | GATATGCATAAAAAACTACT+AGG | + | chr1.3:68960134-68960153 | None:intergenic | 25.0% |
| ! | GTAATTGTAAGAAATAATGC+AGG | - | chr1.3:68961315-68961334 | MS.gene49121:intron | 25.0% |
| ! | TAAAAAGATGATCGTGTAAA+CGG | - | chr1.3:68959815-68959834 | MS.gene49121:intron | 25.0% |
| ! | TACTTCTACTACATGTTATA+TGG | - | chr1.3:68961956-68961975 | MS.gene49121:intron | 25.0% |
| ! | TATTGAAGTTGTTAGTTACT+TGG | - | chr1.3:68961187-68961206 | MS.gene49121:intron | 25.0% |
| ! | TATTGCATTAACTTTGTGTA+CGG | - | chr1.3:68964113-68964132 | MS.gene49121:intron | 25.0% |
| ! | TCCATCAAAAGTTATTGTAA+AGG | + | chr1.3:68962933-68962952 | None:intergenic | 25.0% |
| ! | TGGAATGGAAATAACTTAAA+CGG | + | chr1.3:68963216-68963235 | None:intergenic | 25.0% |
| ! | TTAATAAAAAGGATGTCCTT+AGG | - | chr1.3:68962041-68962060 | MS.gene49121:intron | 25.0% |
| ! | TTATATTAGGAGAAAACATG+TGG | - | chr1.3:68964421-68964440 | MS.gene49121:intron | 25.0% |
| ! | TTATTCGTGTAAATTCACTT+TGG | - | chr1.3:68962776-68962795 | MS.gene49121:intron | 25.0% |
| !! | AATAAGGATTGAATGGATTT+AGG | + | chr1.3:68963152-68963171 | None:intergenic | 25.0% |
| !! | CAATGTTGTCAAATAGTTTT+TGG | - | chr1.3:68964036-68964055 | MS.gene49121:intron | 25.0% |
| !! | CATATAGATCCCATTATTTT+GGG | - | chr1.3:68964177-68964196 | MS.gene49121:intron | 25.0% |
| !! | GATAACTTGAGTTTGATTTA+TGG | + | chr1.3:68960426-68960445 | None:intergenic | 25.0% |
| !! | TACAGTATCTTTTAATGCAA+AGG | - | chr1.3:68961552-68961571 | MS.gene49121:CDS | 25.0% |
| !! | TCATATAGATCCCATTATTT+TGG | - | chr1.3:68964176-68964195 | MS.gene49121:intron | 25.0% |
| !! | TCCTTTACAATAACTTTTGA+TGG | - | chr1.3:68962929-68962948 | MS.gene49121:CDS | 25.0% |
| !! | TTTCTCATTCTTGACTTTTT+GGG | - | chr1.3:68962551-68962570 | MS.gene49121:CDS | 25.0% |
| !!! | AATGTTACTGTTTTATTCTC+CGG | - | chr1.3:68961416-68961435 | MS.gene49121:intron | 25.0% |
| !!! | ACTTTTGATGGATTTTACAA+CGG | - | chr1.3:68962941-68962960 | MS.gene49121:CDS | 25.0% |
| !!! | CGTCATTGATTTTATCAAAA+CGG | + | chr1.3:68961755-68961774 | None:intergenic | 25.0% |
| !!! | TATTCCTTTAAAACTACTAG+TGG | - | chr1.3:68960506-68960525 | MS.gene49121:intron | 25.0% |
| AACACAAAAAAGTGGTATTG+CGG | + | chr1.3:68960327-68960346 | None:intergenic | 30.0% | |
| AAGAAACCACAATTGAAAGT+TGG | + | chr1.3:68961244-68961263 | None:intergenic | 30.0% | |
| AATGGAAATAACTTAAACGG+AGG | + | chr1.3:68963213-68963232 | None:intergenic | 30.0% | |
| ACTTATACAAGGAATCCTAT+AGG | + | chr1.3:68964479-68964498 | None:intergenic | 30.0% | |
| AGGATTTGGATAAATTATGC+AGG | - | chr1.3:68962827-68962846 | MS.gene49121:intron | 30.0% | |
| AGTTAAATCAGTATGTCCTA+TGG | - | chr1.3:68963997-68964016 | MS.gene49121:intron | 30.0% | |
| ATATACAGGGTTTCAAATTG+TGG | + | chr1.3:68960755-68960774 | None:intergenic | 30.0% | |
| ATATGAATTATGCAGGTCAA+AGG | - | chr1.3:68962807-68962826 | MS.gene49121:intron | 30.0% | |
| ATCTCTCAAACAGATTGAAT+AGG | - | chr1.3:68963339-68963358 | MS.gene49121:CDS | 30.0% | |
| ATGAAGGAATAAGGATTGAA+TGG | + | chr1.3:68963159-68963178 | None:intergenic | 30.0% | |
| ATGGAAATAACTTAAACGGA+GGG | + | chr1.3:68963212-68963231 | None:intergenic | 30.0% | |
| ATTGGATAGAGTCAAATATG+GGG | + | chr1.3:68960297-68960316 | None:intergenic | 30.0% | |
| CAATTTGGTTAAGCAGAAAT+AGG | - | chr1.3:68964708-68964727 | MS.gene49121:CDS | 30.0% | |
| CTTATTTCCATAAACTCTAC+AGG | - | chr1.3:68962229-68962248 | MS.gene49121:intron | 30.0% | |
| GCTCCCTACATTAATAAAAT+TGG | + | chr1.3:68964550-68964569 | None:intergenic | 30.0% | |
| GCTTAATACATGAAGGAATA+AGG | + | chr1.3:68963168-68963187 | None:intergenic | 30.0% | |
| GTCTTAGATCTTTATCGAAA+AGG | + | chr1.3:68960273-68960292 | None:intergenic | 30.0% | |
| TAACAGCATTCTCTCTTATT+GGG | - | chr1.3:68964147-68964166 | MS.gene49121:intron | 30.0% | |
| TATGTTCCAACTTTCAATTG+TGG | - | chr1.3:68961235-68961254 | MS.gene49121:intron | 30.0% | |
| TCATAGGATAAAATTCATGC+AGG | + | chr1.3:68964229-68964248 | None:intergenic | 30.0% | |
| TCTCTGACATTTATAACCAT+AGG | + | chr1.3:68964016-68964035 | None:intergenic | 30.0% | |
| TCTTTCTTTCTTCTTCCATT+CGG | - | chr1.3:68963101-68963120 | MS.gene49121:intron | 30.0% | |
| TGTCAAAGAAACAATACTCA+AGG | - | chr1.3:68960986-68961005 | MS.gene49121:intron | 30.0% | |
| TTAATATCAACCTGAAACAC+AGG | - | chr1.3:68963065-68963084 | MS.gene49121:intron | 30.0% | |
| TTAATGTGGAAAAACCAAAC+TGG | + | chr1.3:68962613-68962632 | None:intergenic | 30.0% | |
| TTATAATGCACGAATAACCT+CGG | - | chr1.3:68964090-68964109 | MS.gene49121:intron | 30.0% | |
| TTATGCAGGTCTAATAAATG+TGG | - | chr1.3:68963939-68963958 | MS.gene49121:intron | 30.0% | |
| TTCAACATTGAATTTGGGAA+AGG | + | chr1.3:68963240-68963259 | None:intergenic | 30.0% | |
| TTTATACAGTTACAGCAGAT+GGG | - | chr1.3:68961861-68961880 | MS.gene49121:intron | 30.0% | |
| ! | AACCATTTTCAAAAACCTTC+TGG | + | chr1.3:68960656-68960675 | None:intergenic | 30.0% |
| ! | ATGGTTTGTGAATCTAATTG+TGG | - | chr1.3:68960670-68960689 | MS.gene49121:intron | 30.0% |
| ! | CTCGTCAATTAAATTTTCCA+GGG | - | chr1.3:68963124-68963143 | MS.gene49121:intron | 30.0% |
| ! | CTTTCTCATTCTTGACTTTT+TGG | - | chr1.3:68962550-68962569 | MS.gene49121:CDS | 30.0% |
| ! | TCCCTTTTTCTAATAACAGT+CGG | + | chr1.3:68962482-68962501 | None:intergenic | 30.0% |
| ! | TCCTTATTCCAATTGTTGTT+GGG | - | chr1.3:68964293-68964312 | MS.gene49121:intron | 30.0% |
| ! | TCGCAACACAGAATTTTAAA+AGG | + | chr1.3:68963545-68963564 | None:intergenic | 30.0% |
| ! | TCTCTTGACAAATCTTTTGT+TGG | - | chr1.3:68961635-68961654 | MS.gene49121:intron | 30.0% |
| ! | TGGTTTGTGAATCTAATTGT+GGG | - | chr1.3:68960671-68960690 | MS.gene49121:intron | 30.0% |
| ! | TTTTATACACTCTACCAAAC+AGG | + | chr1.3:68962176-68962195 | None:intergenic | 30.0% |
| ! | TTTTTCTCTTTATCTTCTGC+TGG | - | chr1.3:68960621-68960640 | MS.gene49121:intron | 30.0% |
| !! | ATCCAGAAGGTTTTTGAAAA+TGG | - | chr1.3:68960651-68960670 | MS.gene49121:intron | 30.0% |
| !! | CGCAACACAGAATTTTAAAA+GGG | + | chr1.3:68963544-68963563 | None:intergenic | 30.0% |
| !! | TGAGTTTTATGAATGTTAGC+TGG | - | chr1.3:68963910-68963929 | MS.gene49121:intron | 30.0% |
| AAACATGCGTTCTGATTATG+TGG | - | chr1.3:68963512-68963531 | MS.gene49121:intron | 35.0% | |
| AAAGAACACATACCTACCTA+AGG | + | chr1.3:68962060-68962079 | None:intergenic | 35.0% | |
| AACATGCGTTCTGATTATGT+GGG | - | chr1.3:68963513-68963532 | MS.gene49121:intron | 35.0% | |
| AACTTTGCATCACATAAGCA+TGG | - | chr1.3:68960223-68960242 | MS.gene49121:intron | 35.0% | |
| AACTTTGTGTACGGAAAAGA+AGG | - | chr1.3:68964122-68964141 | MS.gene49121:intron | 35.0% | |
| AAGAGGAGCTTAATACATGA+AGG | + | chr1.3:68963175-68963194 | None:intergenic | 35.0% | |
| AAGCTATCCTGTAGAGTTTA+TGG | + | chr1.3:68962239-68962258 | None:intergenic | 35.0% | |
| AATTTAATTGACGAGCCGAA+TGG | + | chr1.3:68963119-68963138 | None:intergenic | 35.0% | |
| ACAAAGTTAATGCAATACCG+AGG | + | chr1.3:68964110-68964129 | None:intergenic | 35.0% | |
| ACACGCAAAAGTAAGAAAGA+AGG | - | chr1.3:68961675-68961694 | MS.gene49121:intron | 35.0% | |
| ACATTGAATTTGGGAAAGGA+TGG | + | chr1.3:68963236-68963255 | None:intergenic | 35.0% | |
| ACCCAACAACAATTGGAATA+AGG | + | chr1.3:68964297-68964316 | None:intergenic | 35.0% | |
| ACTGTTATGTCGGAAAAGAT+TGG | + | chr1.3:68962731-68962750 | None:intergenic | 35.0% | |
| ACTTTGCATCACATAAGCAT+GGG | - | chr1.3:68960224-68960243 | MS.gene49121:intron | 35.0% | |
| ACTTTGTGTACGGAAAAGAA+GGG | - | chr1.3:68964123-68964142 | MS.gene49121:intron | 35.0% | |
| AGGAGTAACCATTATTTGAC+TGG | - | chr1.3:68963359-68963378 | MS.gene49121:CDS | 35.0% | |
| ATTACAATGGTCATTCTGAG+TGG | + | chr1.3:68963799-68963818 | None:intergenic | 35.0% | |
| ATTACTTCTCCATCATGATC+AGG | - | chr1.3:68962654-68962673 | MS.gene49121:intron | 35.0% | |
| ATTATGCAGGTCAAAGGATT+TGG | - | chr1.3:68962813-68962832 | MS.gene49121:intron | 35.0% | |
| ATTATGCAGGTGATAGGATT+TGG | - | chr1.3:68962840-68962859 | MS.gene49121:intron | 35.0% | |
| CAAACTTTCCTTACAAACTC+CGG | + | chr1.3:68960387-68960406 | None:intergenic | 35.0% | |
| CAATGTAGCATGCATATACA+GGG | + | chr1.3:68960768-68960787 | None:intergenic | 35.0% | |
| CAGGTCTAATAAATGTGGTT+GGG | - | chr1.3:68963944-68963963 | MS.gene49121:intron | 35.0% | |
| CCAAAACATTAAGACAAGTG+AGG | + | chr1.3:68962017-68962036 | None:intergenic | 35.0% | |
| CTAACAGCATTCTCTCTTAT+TGG | - | chr1.3:68964146-68964165 | MS.gene49121:intron | 35.0% | |
| CTTTATACAGTTACAGCAGA+TGG | - | chr1.3:68961860-68961879 | MS.gene49121:intron | 35.0% | |
| GAACCGTTAATTAAATCCAG+TGG | + | chr1.3:68963024-68963043 | None:intergenic | 35.0% | |
| GACTGTTATTAGAAAAAGGG+AGG | - | chr1.3:68962481-68962500 | MS.gene49121:intron | 35.0% | |
| GAGCCACTGGATTTAATTAA+CGG | - | chr1.3:68963018-68963037 | MS.gene49121:intron | 35.0% | |
| GAGTTTATGGCGTTGTAAAA+GGG | + | chr1.3:68963681-68963700 | None:intergenic | 35.0% | |
| GCATCTGAGTATAATTCTTC+TGG | - | chr1.3:68961077-68961096 | MS.gene49121:intron | 35.0% | |
| GCCGACTGTTATTAGAAAAA+GGG | - | chr1.3:68962478-68962497 | MS.gene49121:intron | 35.0% | |
| GGAGCTTCAACATTGAATTT+GGG | + | chr1.3:68963245-68963264 | None:intergenic | 35.0% | |
| GGATAAATTATGCAGGTGAT+AGG | - | chr1.3:68962834-68962853 | MS.gene49121:intron | 35.0% | |
| GGATCCATTCCCAAAATAAT+GGG | + | chr1.3:68964189-68964208 | None:intergenic | 35.0% | |
| GGTTTAATTACCTGTGTTTC+AGG | + | chr1.3:68963078-68963097 | None:intergenic | 35.0% | |
| GTAACCATTATTTGACTGGT+CGG | - | chr1.3:68963363-68963382 | MS.gene49121:CDS | 35.0% | |
| GTCCTTATTCCAATTGTTGT+TGG | - | chr1.3:68964292-68964311 | MS.gene49121:intron | 35.0% | |
| TAAAAAGGATGTCCTTAGGT+AGG | - | chr1.3:68962045-68962064 | MS.gene49121:intron | 35.0% | |
| TATATGGACATTGTGGTAAC+AGG | - | chr1.3:68960867-68960886 | MS.gene49121:intron | 35.0% | |
| TATCCTGAACAATTCGTCTT+TGG | - | chr1.3:68960442-68960461 | MS.gene49121:intron | 35.0% | |
| TCAATGTAGCATGCATATAC+AGG | + | chr1.3:68960769-68960788 | None:intergenic | 35.0% | |
| TCTGCTGTAACTGTATAAAG+AGG | + | chr1.3:68961860-68961879 | None:intergenic | 35.0% | |
| TCTGGTGTTTCGATCTATAA+TGG | - | chr1.3:68963286-68963305 | MS.gene49121:CDS | 35.0% | |
| TCTTACATCAAGATGTTCAG+CGG | + | chr1.3:68961107-68961126 | None:intergenic | 35.0% | |
| TGGAAATAACTTAAACGGAG+GGG | + | chr1.3:68963211-68963230 | None:intergenic | 35.0% | |
| TGGAAGAAGAAAGAAAGACT+AGG | + | chr1.3:68963099-68963118 | None:intergenic | 35.0% | |
| TGTCTTTGGACAAACTGAAA+GGG | + | chr1.3:68961353-68961372 | None:intergenic | 35.0% | |
| TGTGAGTAAATATGCCAGTT+TGG | - | chr1.3:68962596-68962615 | MS.gene49121:CDS | 35.0% | |
| TTACCACATACCTATGTGAT+TGG | + | chr1.3:68961397-68961416 | None:intergenic | 35.0% | |
| TTATACAGTTACAGCAGATG+GGG | - | chr1.3:68961862-68961881 | MS.gene49121:intron | 35.0% | |
| TTGGATAGAGTCAAATATGG+GGG | + | chr1.3:68960296-68960315 | None:intergenic | 35.0% | |
| TTGTCTTTGGACAAACTGAA+AGG | + | chr1.3:68961354-68961373 | None:intergenic | 35.0% | |
| ! | ATCACATAAGCATGGGTTTT+AGG | - | chr1.3:68960231-68960250 | MS.gene49121:intron | 35.0% |
| ! | CCTCACTTGTCTTAATGTTT+TGG | - | chr1.3:68962014-68962033 | MS.gene49121:intron | 35.0% |
| ! | GCTCGTCAATTAAATTTTCC+AGG | - | chr1.3:68963123-68963142 | MS.gene49121:intron | 35.0% |
| ! | TAACCATTATTTGACTGGTC+GGG | - | chr1.3:68963364-68963383 | MS.gene49121:CDS | 35.0% |
| ! | TGATTTGGCAAAGAAACTCT+GGG | - | chr1.3:68964675-68964694 | MS.gene49121:CDS | 35.0% |
| ! | TGCCGACTGTTATTAGAAAA+AGG | - | chr1.3:68962477-68962496 | MS.gene49121:intron | 35.0% |
| !! | CAATGTCCCTAAGTTGTTTT+TGG | - | chr1.3:68962206-68962225 | MS.gene49121:intron | 35.0% |
| !! | TACTGATTTAACTTACCTGC+TGG | + | chr1.3:68963990-68964009 | None:intergenic | 35.0% |
| !! | TCCTTTAAAACTACTAGTGG+TGG | - | chr1.3:68960509-68960528 | MS.gene49121:intron | 35.0% |
| !!! | ACCACCACTAGTAGTTTTAA+AGG | + | chr1.3:68960513-68960532 | None:intergenic | 35.0% |
| !!! | AGATCCCATTATTTTGGGAA+TGG | - | chr1.3:68964182-68964201 | MS.gene49121:intron | 35.0% |
| !!! | GACTATTTTAACGCGGTATA+TGG | - | chr1.3:68960851-68960870 | MS.gene49121:intron | 35.0% |
| !!! | GATGTGTGACTATTTTAACG+CGG | - | chr1.3:68960844-68960863 | MS.gene49121:intron | 35.0% |
| !!! | TTAGCTGGTTTGTTTTATGC+AGG | - | chr1.3:68963925-68963944 | MS.gene49121:intron | 35.0% |
| AATTGCAGCAAGGATTAAGG+CGG | + | chr1.3:68963267-68963286 | None:intergenic | 40.0% | |
| AATTGTTAATGTCGCCTCAG+AGG | - | chr1.3:68961701-68961720 | MS.gene49121:intron | 40.0% | |
| ACAAAAAAGTGGTATTGCGG+AGG | + | chr1.3:68960324-68960343 | None:intergenic | 40.0% | |
| ACTGCAAATTCTCTTCATCC+AGG | - | chr1.3:68962694-68962713 | MS.gene49121:intron | 40.0% | |
| ACTGCTGAACAAGTTACTCA+TGG | - | chr1.3:68959619-68959638 | MS.gene49121:CDS | 40.0% | |
| ACTGTGTCCATCATGATGTA+GGG | - | chr1.3:68963436-68963455 | MS.gene49121:intron | 40.0% | |
| AGACTATAGCATGACCTCTT+TGG | - | chr1.3:68962142-68962161 | MS.gene49121:intron | 40.0% | |
| AGCCAACTGATAAAAGCTCA+AGG | + | chr1.3:68962091-68962110 | None:intergenic | 40.0% | |
| AGGGTTTCAAATTGTGGTTG+TGG | + | chr1.3:68960749-68960768 | None:intergenic | 40.0% | |
| ATGGCATCAAGTTTAGCAGA+GGG | + | chr1.3:68961017-68961036 | None:intergenic | 40.0% | |
| CAGAATTGCAGCAAGGATTA+AGG | + | chr1.3:68963270-68963289 | None:intergenic | 40.0% | |
| CAGTTGATTGGATCTTACTC+CGG | + | chr1.3:68961438-68961457 | None:intergenic | 40.0% | |
| CCTTGAGATGCTTTGTAAGT+TGG | + | chr1.3:68961930-68961949 | None:intergenic | 40.0% | |
| CTGCAGTTCAATGTTGTCTT+TGG | + | chr1.3:68961367-68961386 | None:intergenic | 40.0% | |
| CTGGGATTTCAGCATCAATT+TGG | - | chr1.3:68964693-68964712 | MS.gene49121:CDS | 40.0% | |
| CTTAATCCTTGCTGCAATTC+TGG | - | chr1.3:68963268-68963287 | MS.gene49121:CDS | 40.0% | |
| GAAACACCTTTCTTGCTGAA+TGG | + | chr1.3:68959580-68959599 | None:intergenic | 40.0% | |
| GAAGAAACAGGAAGAGAGTA+TGG | + | chr1.3:68959686-68959705 | None:intergenic | 40.0% | |
| GAATTTGGGAAAGGATGGAA+TGG | + | chr1.3:68963231-68963250 | None:intergenic | 40.0% | |
| GATTATGGGTGTGAGAAACA+TGG | - | chr1.3:68960950-68960969 | MS.gene49121:intron | 40.0% | |
| GCAGGTCTAATAAATGTGGT+TGG | - | chr1.3:68963943-68963962 | MS.gene49121:intron | 40.0% | |
| GCCAACTGATAAAAGCTCAA+GGG | + | chr1.3:68962090-68962109 | None:intergenic | 40.0% | |
| GGAATGGATCCCACATAAAA+TGG | - | chr1.3:68964198-68964217 | MS.gene49121:intron | 40.0% | |
| GGAGGGTTAACACAAAAAAG+TGG | + | chr1.3:68960335-68960354 | None:intergenic | 40.0% | |
| GGAGTTAGATCTTAGCTCAT+TGG | - | chr1.3:68961037-68961056 | MS.gene49121:intron | 40.0% | |
| GGAGTTTATGGCGTTGTAAA+AGG | + | chr1.3:68963682-68963701 | None:intergenic | 40.0% | |
| GGGAGCTTCAACATTGAATT+TGG | + | chr1.3:68963246-68963265 | None:intergenic | 40.0% | |
| GGGATCCATTCCCAAAATAA+TGG | + | chr1.3:68964190-68964209 | None:intergenic | 40.0% | |
| GTAGCATAAACCACATGATC+CGG | + | chr1.3:68963418-68963437 | None:intergenic | 40.0% | |
| TACTGTGTCCATCATGATGT+AGG | - | chr1.3:68963435-68963454 | MS.gene49121:intron | 40.0% | |
| TATGGACCAACCAGTAACAA+TGG | + | chr1.3:68959668-68959687 | None:intergenic | 40.0% | |
| TCACCAAAGACGAATTGTTC+AGG | + | chr1.3:68960448-68960467 | None:intergenic | 40.0% | |
| TCCATCATGATCAGGAAGAT+GGG | - | chr1.3:68962662-68962681 | MS.gene49121:intron | 40.0% | |
| TCTGAGTGGTCATTACTCAT+TGG | + | chr1.3:68963785-68963804 | None:intergenic | 40.0% | |
| TCTGTGTTGCGAGTTTAAAG+TGG | - | chr1.3:68963553-68963572 | MS.gene49121:intron | 40.0% | |
| TGAGCTAAGATCTAACTCCA+TGG | + | chr1.3:68961036-68961055 | None:intergenic | 40.0% | |
| TGCTGGATTACATATCCAGA+AGG | - | chr1.3:68960638-68960657 | MS.gene49121:intron | 40.0% | |
| TGGATAGAGTCAAATATGGG+GGG | + | chr1.3:68960295-68960314 | None:intergenic | 40.0% | |
| TGTGATGAAAAATGTCCAGC+AGG | - | chr1.3:68963972-68963991 | MS.gene49121:intron | 40.0% | |
| TTAAACGGAGGGGTAATAAC+AGG | + | chr1.3:68963201-68963220 | None:intergenic | 40.0% | |
| TTAAATCCAGTGGCTCATGT+TGG | + | chr1.3:68963014-68963033 | None:intergenic | 40.0% | |
| TTCTCACACCCATAATCACA+TGG | + | chr1.3:68960947-68960966 | None:intergenic | 40.0% | |
| ! | AGATTGGTGACAATTGTTCC+TGG | + | chr1.3:68962715-68962734 | None:intergenic | 40.0% |
| ! | CAGGTCTCACCATTTTATGT+GGG | + | chr1.3:68964210-68964229 | None:intergenic | 40.0% |
| ! | CCAACTTACAAAGCATCTCA+AGG | - | chr1.3:68961927-68961946 | MS.gene49121:intron | 40.0% |
| ! | GCATGAAGAGATACCCTTTT+GGG | + | chr1.3:68959723-68959742 | None:intergenic | 40.0% |
| ! | GGTCTTTTCTGTTCAGATTC+CGG | - | chr1.3:68963385-68963404 | MS.gene49121:CDS | 40.0% |
| ! | TCCCTTGAGCTTTTATCAGT+TGG | - | chr1.3:68962086-68962105 | MS.gene49121:intron | 40.0% |
| ! | TGCATGAAGAGATACCCTTT+TGG | + | chr1.3:68959724-68959743 | None:intergenic | 40.0% |
| ! | TGCGATTCTCTTTGTTGTGA+GGG | + | chr1.3:68964337-68964356 | None:intergenic | 40.0% |
| ! | TTGAATGGATTTAGGAACCC+TGG | + | chr1.3:68963144-68963163 | None:intergenic | 40.0% |
| !! | AAGGTGTTTCTGGTTTCTCA+TGG | - | chr1.3:68959590-68959609 | MS.gene49121:CDS | 40.0% |
| !! | CTCATTCTTGACTTTTTGGG+TGG | - | chr1.3:68962554-68962573 | MS.gene49121:CDS | 40.0% |
| !! | CTGATTTGGCAAAGAAACTC+TGG | - | chr1.3:68964674-68964693 | MS.gene49121:CDS | 40.0% |
| !! | GAGATGCTTTGTAAGTTGGT+TGG | + | chr1.3:68961926-68961945 | None:intergenic | 40.0% |
| !! | TTCAGCAAGAAAGGTGTTTC+TGG | - | chr1.3:68959580-68959599 | MS.gene49121:CDS | 40.0% |
| AACGCGGTATATGGACATTG+TGG | - | chr1.3:68960860-68960879 | MS.gene49121:intron | 45.0% | |
| ACAAAACAACCCCACATGGA+AGG | - | chr1.3:68964647-68964666 | MS.gene49121:CDS | 45.0% | |
| ACTCATGGAATCGATGCTAC+TGG | - | chr1.3:68959634-68959653 | MS.gene49121:CDS | 45.0% | |
| AGAAAAAGGGAGGTGATTCG+TGG | - | chr1.3:68962491-68962510 | MS.gene49121:intron | 45.0% | |
| AGACCCGACCAGTCAAATAA+TGG | + | chr1.3:68963370-68963389 | None:intergenic | 45.0% | |
| ATGTGGCCATTCAGCAAGAA+AGG | - | chr1.3:68959571-68959590 | MS.gene49121:CDS | 45.0% | |
| ATTGCAGCAAGGATTAAGGC+GGG | + | chr1.3:68963266-68963285 | None:intergenic | 45.0% | |
| CAAAACAACCCCACATGGAA+GGG | - | chr1.3:68964648-68964667 | MS.gene49121:CDS | 45.0% | |
| CACAGGTTCGCATATTCTGA+AGG | - | chr1.3:68961726-68961745 | MS.gene49121:intron | 45.0% | |
| CACTAACTCCCTTCACTTGT+GGG | + | chr1.3:68964600-68964619 | None:intergenic | 45.0% | |
| CAGTTTGCCACCAATCACAT+AGG | - | chr1.3:68961384-68961403 | MS.gene49121:intron | 45.0% | |
| CATGGCATCAAGTTTAGCAG+AGG | + | chr1.3:68961018-68961037 | None:intergenic | 45.0% | |
| CCACATACCTATGTGATTGG+TGG | + | chr1.3:68961394-68961413 | None:intergenic | 45.0% | |
| CCACCAATCACATAGGTATG+TGG | - | chr1.3:68961391-68961410 | MS.gene49121:intron | 45.0% | |
| CCATCATGATCAGGAAGATG+GGG | - | chr1.3:68962663-68962682 | MS.gene49121:intron | 45.0% | |
| CCTTTCTCCTGAAAATCGGA+GGG | + | chr1.3:68960352-68960371 | None:intergenic | 45.0% | |
| CGACATAACAGTGCAGTGAA+CGG | - | chr1.3:68962739-68962758 | MS.gene49121:intron | 45.0% | |
| CGTTCACTGCACTGTTATGT+CGG | + | chr1.3:68962741-68962760 | None:intergenic | 45.0% | |
| CTCCATCATGATCAGGAAGA+TGG | - | chr1.3:68962661-68962680 | MS.gene49121:intron | 45.0% | |
| CTCTGCTAAACTTGATGCCA+TGG | - | chr1.3:68961016-68961035 | MS.gene49121:intron | 45.0% | |
| CTGAAACCCCTACATCATGA+TGG | + | chr1.3:68963446-68963465 | None:intergenic | 45.0% | |
| CTGGTAATCCGGAGTTTGTA+AGG | - | chr1.3:68960376-68960395 | MS.gene49121:intron | 45.0% | |
| CTGTGTCCATCATGATGTAG+GGG | - | chr1.3:68963437-68963456 | MS.gene49121:intron | 45.0% | |
| CTTACAAACTCCGGATTACC+AGG | + | chr1.3:68960378-68960397 | None:intergenic | 45.0% | |
| GAAACACCAGAATTGCAGCA+AGG | + | chr1.3:68963277-68963296 | None:intergenic | 45.0% | |
| GAATATTGCACGATCCAAGC+TGG | + | chr1.3:68960491-68960510 | None:intergenic | 45.0% | |
| GACCCCTTTCTCCTGAAAAT+CGG | + | chr1.3:68960356-68960375 | None:intergenic | 45.0% | |
| GTGTACAAAACAACCCCACA+TGG | - | chr1.3:68964643-68964662 | MS.gene49121:CDS | 45.0% | |
| TCACTGCCATTGTTACTGGT+TGG | - | chr1.3:68959659-68959678 | MS.gene49121:CDS | 45.0% | |
| TGGTATTGCGGAGGCTAAAT+TGG | + | chr1.3:68960315-68960334 | None:intergenic | 45.0% | |
| TTAACCACTTGAGTCCAGCT+TGG | - | chr1.3:68960474-68960493 | MS.gene49121:intron | 45.0% | |
| ! | CCAATTGTTGTTGGGTCTAG+CGG | - | chr1.3:68964301-68964320 | MS.gene49121:intron | 45.0% |
| ! | CTGCGATTCTCTTTGTTGTG+AGG | + | chr1.3:68964338-68964357 | None:intergenic | 45.0% |
| ! | GCAGGTCTCACCATTTTATG+TGG | + | chr1.3:68964211-68964230 | None:intergenic | 45.0% |
| ! | GTGTTAACCCTCCGATTTTC+AGG | - | chr1.3:68960342-68960361 | MS.gene49121:intron | 45.0% |
| !! | CCTCCGATTTTCAGGAGAAA+GGG | - | chr1.3:68960350-68960369 | MS.gene49121:intron | 45.0% |
| !! | CTCCGATTTTCAGGAGAAAG+GGG | - | chr1.3:68960351-68960370 | MS.gene49121:intron | 45.0% |
| !! | GCATGACCTCTTTGGCTTTA+CGG | - | chr1.3:68962150-68962169 | MS.gene49121:intron | 45.0% |
| !!! | ATAATATTTAAGTTTTTTTT+AGG | + | chr1.3:68964452-68964471 | None:intergenic | 5.0% |
| AAATCAGCGTCCCTTCCATG+TGG | + | chr1.3:68964661-68964680 | None:intergenic | 50.0% | |
| AACAGGCCGTAAAGCCAAAG+AGG | + | chr1.3:68962159-68962178 | None:intergenic | 50.0% | |
| AATCAGCGTCCCTTCCATGT+GGG | + | chr1.3:68964660-68964679 | None:intergenic | 50.0% | |
| AGAAAGGGGTCCTGGTAATC+CGG | - | chr1.3:68960365-68960384 | MS.gene49121:intron | 50.0% | |
| AGCATTGCACCCACAAGTGA+AGG | - | chr1.3:68964588-68964607 | MS.gene49121:intron | 50.0% | |
| CCACAAGTGAAGGGAGTTAG+TGG | - | chr1.3:68964598-68964617 | MS.gene49121:intron | 50.0% | |
| CCACTAACTCCCTTCACTTG+TGG | + | chr1.3:68964601-68964620 | None:intergenic | 50.0% | |
| CCCCATCTTCCTGATCATGA+TGG | + | chr1.3:68962666-68962685 | None:intergenic | 50.0% | |
| CCCTTTCTCCTGAAAATCGG+AGG | + | chr1.3:68960353-68960372 | None:intergenic | 50.0% | |
| CCGCTAGACCCAACAACAAT+TGG | + | chr1.3:68964304-68964323 | None:intergenic | 50.0% | |
| CGCGGTGTCCATGTGATTAT+GGG | - | chr1.3:68960936-68960955 | MS.gene49121:intron | 50.0% | |
| GCATTGCACCCACAAGTGAA+GGG | - | chr1.3:68964589-68964608 | MS.gene49121:intron | 50.0% | |
| GGGGTAATAACAGGCACAAG+AGG | + | chr1.3:68963192-68963211 | None:intergenic | 50.0% | |
| GGTCTCACTGCCATTGTTAC+TGG | - | chr1.3:68959655-68959674 | MS.gene49121:CDS | 50.0% | |
| GTCAAACCAACATGAGCCAC+TGG | - | chr1.3:68963005-68963024 | MS.gene49121:intron | 50.0% | |
| TACAGCAGATGGGGTGCATA+TGG | - | chr1.3:68961871-68961890 | MS.gene49121:intron | 50.0% | |
| TCATGATCAGGAAGATGGGG+TGG | - | chr1.3:68962666-68962685 | MS.gene49121:intron | 50.0% | |
| ! | ACATGGAAGGGACGCTGATT+TGG | - | chr1.3:68964660-68964679 | MS.gene49121:CDS | 50.0% |
| !! | CCCTCCGATTTTCAGGAGAA+AGG | - | chr1.3:68960349-68960368 | MS.gene49121:intron | 50.0% |
| !! | CTTTGGCTTTACGGCCTGTT+TGG | - | chr1.3:68962159-68962178 | MS.gene49121:intron | 50.0% |
| !! | TTTTCAGGAGAAAGGGGTCC+TGG | - | chr1.3:68960357-68960376 | MS.gene49121:intron | 50.0% |
| ATCAGCGTCCCTTCCATGTG+GGG | + | chr1.3:68964659-68964678 | None:intergenic | 55.0% | |
| CGATCCAAGCTGGACTCAAG+TGG | + | chr1.3:68960481-68960500 | None:intergenic | 55.0% | |
| GCGCGGTGTCCATGTGATTA+TGG | - | chr1.3:68960935-68960954 | MS.gene49121:intron | 55.0% | |
| TTCAGATTCCGGCGACGAAC+CGG | - | chr1.3:68963396-68963415 | MS.gene49121:intron | 55.0% | |
| !! | GTGGTAACAGGAGCATCCAG+CGG | - | chr1.3:68960879-68960898 | MS.gene49121:intron | 55.0% |
| ATGTCGCCTCAGAGGCTCAC+AGG | - | chr1.3:68961709-68961728 | MS.gene49121:intron | 60.0% | |
| GCTCGTGTGCTTGCTTTGCG+CGG | - | chr1.3:68960918-68960937 | MS.gene49121:intron | 60.0% | |
| TGCGAACCTGTGAGCCTCTG+AGG | + | chr1.3:68961718-68961737 | None:intergenic | 60.0% | |
| ! | CACATGATCCGGTTCGTCGC+CGG | + | chr1.3:68963407-68963426 | None:intergenic | 60.0% |
| !! | ACAGGAGCATCCAGCGGCAT+TGG | - | chr1.3:68960885-68960904 | MS.gene49121:intron | 60.0% |
| AGTCTCAGCGCCAATGCCGC+TGG | + | chr1.3:68960898-68960917 | None:intergenic | 65.0% | |
| CGGCGACGAACCGGATCATG+TGG | - | chr1.3:68963405-68963424 | MS.gene49121:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68959571 | 68964729 | 68959571 | ID=MS.gene49121 |
| chr1.3 | mRNA | 68959571 | 68964729 | 68959571 | ID=MS.gene49121.t1;Parent=MS.gene49121 |
| chr1.3 | exon | 68964624 | 68964729 | 68964624 | ID=MS.gene49121.t1.exon1;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68964624 | 68964729 | 68964624 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68963180 | 68963411 | 68963180 | ID=MS.gene49121.t1.exon2;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68963180 | 68963411 | 68963180 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68962895 | 68962974 | 68962895 | ID=MS.gene49121.t1.exon3;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68962895 | 68962974 | 68962895 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68962519 | 68962672 | 68962519 | ID=MS.gene49121.t1.exon4;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68962519 | 68962672 | 68962519 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68962352 | 68962430 | 68962352 | ID=MS.gene49121.t1.exon5;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68962352 | 68962430 | 68962352 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68961540 | 68961624 | 68961540 | ID=MS.gene49121.t1.exon6;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68961540 | 68961624 | 68961540 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68960307 | 68960353 | 68960307 | ID=MS.gene49121.t1.exon7;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68960307 | 68960353 | 68960307 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| chr1.3 | exon | 68959571 | 68959735 | 68959571 | ID=MS.gene49121.t1.exon8;Parent=MS.gene49121.t1 |
| chr1.3 | CDS | 68959571 | 68959735 | 68959571 | ID=cds.MS.gene49121.t1;Parent=MS.gene49121.t1 |
| Gene Sequence |
| Protein sequence |
