AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048973

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048973.t1 MTR_8g099995 98.220 337 6 0 1 337 1 337 0.0 686
MS.gene048973.t1 MTR_3g077410 53.538 325 147 2 1 323 1 323 7.10e-123 356
MS.gene048973.t1 MTR_4g105310 53.797 316 142 2 1 314 12 325 1.39e-120 351
MS.gene048973.t1 MTR_7g099850 49.390 328 161 4 1 327 1 324 1.17e-100 300
MS.gene048973.t1 MTR_1g068970 48.788 330 159 5 1 327 1 323 5.19e-99 295
MS.gene048973.t1 MTR_4g105310 53.125 256 116 2 1 254 12 265 8.90e-93 277
MS.gene048973.t1 MTR_8g098415 45.714 315 167 3 7 321 2 312 4.86e-92 277
MS.gene048973.t1 MTR_8g098415 45.981 311 164 3 7 317 2 308 1.43e-90 273
MS.gene048973.t1 MTR_1g100315 45.955 309 163 3 13 321 8 312 5.40e-86 262
MS.gene048973.t1 MTR_1g100395 44.373 311 169 3 13 323 8 314 3.17e-85 260
MS.gene048973.t1 MTR_1g100305 43.934 305 167 3 13 317 8 308 5.44e-82 251
MS.gene048973.t1 MTR_6g053550 45.484 310 164 3 14 321 17 323 1.54e-81 251
MS.gene048973.t1 MTR_1g100335 44.013 309 169 3 13 321 8 312 4.18e-81 249
MS.gene048973.t1 MTR_1g068970 46.183 262 132 4 69 327 1 256 2.62e-72 225
MS.gene048973.t1 MTR_8g098415 43.701 254 140 2 64 317 1 251 1.27e-68 215
MS.gene048973.t1 MTR_1g100335 47.458 236 121 2 13 248 8 240 4.96e-65 206
MS.gene048973.t1 MTR_1g100335 45.968 248 131 2 13 260 8 252 1.03e-64 206
MS.gene048973.t1 MTR_8g098415 50.000 220 107 2 7 226 2 218 2.26e-64 203
MS.gene048973.t1 MTR_6g053600 44.151 265 143 3 15 277 4 265 6.39e-64 204
MS.gene048973.t1 MTR_6g081020 28.896 308 191 7 33 321 59 357 3.43e-25 104
MS.gene048973.t1 MTR_6g041980 29.091 275 177 8 39 312 70 327 8.79e-24 100
MS.gene048973.t1 MTR_3g009190 28.477 302 195 7 39 325 66 361 3.43e-23 99.0
MS.gene048973.t1 MTR_3g009190 28.477 302 195 7 39 325 84 379 4.06e-23 99.0
MS.gene048973.t1 MTR_6g453040 28.428 299 193 7 39 322 44 336 1.38e-22 97.1
MS.gene048973.t1 MTR_2g079710 28.391 317 195 10 33 321 84 396 2.52e-21 94.4
MS.gene048973.t1 MTR_3g009190 27.815 302 197 7 39 325 65 360 7.53e-21 92.4
MS.gene048973.t1 MTR_3g091070 27.723 303 178 9 39 325 44 321 1.01e-20 91.7
MS.gene048973.t1 MTR_6g041980 30.055 183 119 3 39 221 70 243 3.91e-20 89.0
MS.gene048973.t1 MTR_8g022500 42.342 111 39 1 40 150 431 516 7.63e-17 81.6
MS.gene048973.t1 MTR_6g453040 29.648 199 127 3 38 227 65 259 2.39e-15 75.9
MS.gene048973.t1 MTR_3g098470 27.575 301 148 14 38 297 37 308 9.34e-14 71.2
MS.gene048973.t1 MTR_6g453040 31.973 147 90 2 39 179 66 208 1.15e-13 70.1
MS.gene048973.t1 MTR_4g087460 26.374 273 169 7 34 274 20 292 2.18e-12 67.4
MS.gene048973.t1 MTR_3g085740 28.405 257 134 10 23 269 65 281 9.38e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048973.t1 AT4G24050 73.333 330 87 1 1 330 1 329 0.0 511
MS.gene048973.t1 AT1G64590 72.446 323 86 2 1 322 1 321 8.24e-159 447
MS.gene048973.t1 AT4G24050 73.646 277 70 2 1 277 1 274 5.83e-150 423
MS.gene048973.t1 AT5G50130 54.154 325 141 3 1 321 1 321 1.11e-118 346
MS.gene048973.t1 AT5G50130 53.901 282 129 1 40 321 8 288 1.28e-104 309
MS.gene048973.t1 AT5G50130 54.225 284 124 2 40 321 8 287 1.48e-104 309
MS.gene048973.t1 AT5G50130 54.255 282 120 4 1 277 1 278 9.31e-103 305
MS.gene048973.t1 AT5G50130 54.577 284 115 5 1 277 1 277 1.47e-102 305
MS.gene048973.t1 AT2G37540 49.038 312 155 3 10 321 9 316 1.25e-96 289
MS.gene048973.t1 AT5G50130 54.651 258 109 3 1 254 1 254 4.52e-95 283
MS.gene048973.t1 AT5G50130 55.000 260 104 4 1 254 1 253 6.40e-95 283
MS.gene048973.t1 AT5G02540 49.695 328 154 5 8 330 7 328 1.56e-92 279
MS.gene048973.t1 AT4G23430 45.338 311 167 2 7 317 2 309 7.57e-89 270
MS.gene048973.t1 AT5G50130 53.975 239 108 2 40 277 8 245 1.22e-88 268
MS.gene048973.t1 AT5G50130 54.357 241 103 3 40 277 8 244 2.41e-88 267
MS.gene048973.t1 AT4G23420 44.695 311 169 2 7 317 2 309 2.02e-87 266
MS.gene048973.t1 AT4G23420 44.695 311 169 2 7 317 2 309 2.02e-87 266
MS.gene048973.t1 AT4G23430 45.048 313 163 3 7 317 2 307 7.30e-86 262
MS.gene048973.t1 AT4G23420 44.884 303 164 2 15 317 27 326 1.36e-84 259
MS.gene048973.t1 AT4G11410 43.607 305 168 3 13 317 8 308 5.10e-82 252
MS.gene048973.t1 AT4G23430 42.765 311 165 3 7 317 2 299 2.46e-78 242
MS.gene048973.t1 AT4G23430 42.492 313 161 4 7 317 2 297 1.84e-75 235
MS.gene048973.t1 AT2G37540 50.420 238 115 2 10 247 9 243 3.77e-74 230
MS.gene048973.t1 AT4G23420 45.076 264 142 2 7 270 2 262 4.06e-72 224
MS.gene048973.t1 AT4G23420 47.280 239 123 2 7 245 2 237 1.46e-68 215
MS.gene048973.t1 AT4G11410 45.532 235 125 2 13 247 8 239 5.20e-65 206
MS.gene048973.t1 AT5G53100 33.333 303 171 8 33 314 42 334 3.72e-30 118
MS.gene048973.t1 AT5G53090 31.438 299 179 7 33 314 54 343 1.42e-29 117
MS.gene048973.t1 AT4G27760 30.435 299 182 7 33 314 55 344 4.31e-27 110
MS.gene048973.t1 AT5G04070 29.667 300 188 8 39 323 62 353 5.76e-25 103
MS.gene048973.t1 AT5G15940 29.762 336 203 11 17 336 40 358 1.67e-24 102
MS.gene048973.t1 AT5G15940 29.762 336 203 11 17 336 41 359 1.84e-24 102
MS.gene048973.t1 AT5G15940 29.762 336 203 11 17 336 41 359 1.84e-24 102
MS.gene048973.t1 AT1G03630 31.429 315 185 11 34 321 86 396 2.87e-24 102
MS.gene048973.t1 AT1G03630 31.429 315 185 11 34 321 88 398 3.21e-24 102
MS.gene048973.t1 AT5G15940 32.443 262 158 8 17 265 41 296 3.75e-24 100
MS.gene048973.t1 AT5G54190 28.302 318 194 11 33 321 90 402 5.09e-24 102
MS.gene048973.t1 AT4G09750 27.972 286 185 8 15 297 23 290 1.52e-23 99.4
MS.gene048973.t1 AT4G27440 28.707 317 194 10 33 321 86 398 7.23e-23 98.6
MS.gene048973.t1 AT4G27440 28.707 317 194 10 33 321 86 398 7.23e-23 98.6

Find 98 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTTGCCACTAATTATTT+AGG 0.203045 4.1:-4097608 MS.gene048973:intron
CGAAACCTCAACTTCCAAAT+TGG 0.217272 4.1:-4092464 MS.gene048973:CDS
GCAATACACGGTTGGTTTAC+TGG 0.224176 4.1:-4097405 MS.gene048973:CDS
TTCCGAATTAATGATTTCTA+AGG 0.232240 4.1:-4092404 MS.gene048973:CDS
AAAATTCAAGGTTATTAATT+AGG 0.234521 4.1:+4092362 None:intergenic
GACTTGTTCGGCGGTGGATT+TGG 0.246150 4.1:+4098289 None:intergenic
GAGCGTGAAGGCTTTCTTAC+AGG 0.265658 4.1:-4095723 MS.gene048973:intron
TCGGCTGGTCCAAGCGGTTT+TGG 0.276106 4.1:-4098314 MS.gene048973:CDS
AGTTATGTTGGATCCCAATT+TGG 0.277606 4.1:+4092450 None:intergenic
TGGCGACGTCATCTCCTATT+TGG 0.287781 4.1:-4097385 MS.gene048973:CDS
ATTAGGTCAAAGGCAGCTTT+TGG 0.292856 4.1:+4092379 None:intergenic
TAACTGAAGCTTCAAGGTTA+TGG 0.301474 4.1:-4092432 MS.gene048973:CDS
GTGGAAAACGTTGGCGAGTT+TGG 0.312144 4.1:+4096167 None:intergenic
ACCCTTAGAAATCATTAATT+CGG 0.316889 4.1:+4092402 None:intergenic
GACTGTGAACTGCGTTCATC+CGG 0.337210 4.1:-4095772 MS.gene048973:CDS
ACGGAGATCGCCGCAGGTTT+CGG 0.369374 4.1:+4098265 None:intergenic
GCGGCATATATGAGCCAAAT+AGG 0.369833 4.1:+4097371 None:intergenic
CCAATAAACTTCAAAATTCA+AGG 0.382716 4.1:+4092350 None:intergenic
TCCATCACCGCCATCATAAC+AGG 0.393753 4.1:-4098242 MS.gene048973:CDS
AACTGAAGCTTCAAGGTTAT+GGG 0.397578 4.1:-4092431 MS.gene048973:CDS
TTCACGCTCTCTGGTGAGTC+TGG 0.403631 4.1:+4095737 None:intergenic
CCGGACACATTGACGAGCCT+TGG 0.405233 4.1:+4092508 None:intergenic
GAAACGGTTAAATACATAAT+CGG 0.418265 4.1:-4098338 MS.gene048973:CDS
CCTTGAAGCTTCAGTTATGT+TGG 0.418462 4.1:+4092438 None:intergenic
AAGAAAGCCTTCACGCTCTC+TGG 0.426194 4.1:+4095728 None:intergenic
GCAGGTTTCGGTGACTTGTT+CGG 0.429594 4.1:+4098277 None:intergenic
CTCATATATGCCGCAACAAA+AGG 0.429884 4.1:-4097362 MS.gene048973:intron
TTACTCACCTAAATAATTAG+TGG 0.432077 4.1:+4097601 None:intergenic
TTCGGTGACTTGTTCGGCGG+TGG 0.432304 4.1:+4098283 None:intergenic
GGGAATGGTCTTTAAGAGCT+TGG 0.440263 4.1:+4095561 None:intergenic
GTTGAAACGGCAAAGGAGAC+AGG 0.443768 4.1:-4097459 MS.gene048973:CDS
CCAACATAACTGAAGCTTCA+AGG 0.448430 4.1:-4092438 MS.gene048973:CDS
ACTGTGAACTGCGTTCATCC+GGG 0.463347 4.1:-4095771 MS.gene048973:CDS
ATAACTATAATCTCCGCTTC+AGG 0.466241 4.1:+4098095 None:intergenic
CGGACACATTGACGAGCCTT+GGG 0.466870 4.1:+4092509 None:intergenic
ATCATAACAGGTGGTACGTC+AGG 0.468933 4.1:-4098230 MS.gene048973:CDS
CCAAGGCTCGTCAATGTGTC+CGG 0.474558 4.1:-4092508 MS.gene048973:CDS
AGAAATCATTAATTCGGAAA+CGG 0.477259 4.1:+4092408 None:intergenic
GAAACCTCAACTTCCAAATT+GGG 0.478402 4.1:-4092463 MS.gene048973:CDS
AGCGGAAACGGCGCGTGTGT+TGG 0.478909 4.1:-4098201 MS.gene048973:CDS
ACAGGTGGTACGTCAGGAAT+CGG 0.485726 4.1:-4098224 MS.gene048973:CDS
CGCGTGTGTTGGCGAAGAGA+GGG 0.487691 4.1:-4098190 MS.gene048973:CDS
GCAGTCAGCAAAGTACTTGC+CGG 0.493686 4.1:+4092489 None:intergenic
GTCAGGAATCGGAGCGGAAA+CGG 0.496545 4.1:-4098213 MS.gene048973:CDS
TGAAGCGGAGATTATAGTTA+TGG 0.500400 4.1:-4098093 MS.gene048973:CDS
GGATCCCAATTTGGAAGTTG+AGG 0.503982 4.1:+4092459 None:intergenic
AAGGTTATTAATTAGGTCAA+AGG 0.505043 4.1:+4092369 None:intergenic
ACCTGTTATGATGGCGGTGA+TGG 0.505842 4.1:+4098241 None:intergenic
GATGGAACGGAGATCGCCGC+AGG 0.516652 4.1:+4098259 None:intergenic
GCGCGTGTGTTGGCGAAGAG+AGG 0.525349 4.1:-4098191 MS.gene048973:CDS
TGACGTACCACCTGTTATGA+TGG 0.526556 4.1:+4098232 None:intergenic
AGTCTGGTTCTCACGACCCC+CGG 0.529567 4.1:+4095753 None:intergenic
TATTGTATTTACCTGGGGAA+TGG 0.530601 4.1:+4095546 None:intergenic
TCCGAATTAATGATTTCTAA+GGG 0.531554 4.1:-4092403 MS.gene048973:CDS
ATTTCACAAGATGCTTGAAA+CGG 0.543773 4.1:-4098354 None:intergenic
CTGTGAACTGCGTTCATCCG+GGG 0.545350 4.1:-4095770 MS.gene048973:CDS
AAATACATAATCGGATCGGC+TGG 0.551894 4.1:-4098329 MS.gene048973:CDS
ACCTAAATAATTAGTGGCAA+AGG 0.552038 4.1:+4097607 None:intergenic
TGTTGGCGAAGAGAGGGGCG+AGG 0.552443 4.1:-4098184 MS.gene048973:CDS
GATTTGGATCCAAAACCGCT+TGG 0.553143 4.1:+4098305 None:intergenic
GCTCTTAAAGACCATTCCCC+AGG 0.566840 4.1:-4095557 MS.gene048973:intron
GCAAAGGAGACAGGGATACA+AGG 0.572206 4.1:-4097450 MS.gene048973:CDS
CGAGCTTTCTCGCAGACTCA+AGG 0.580007 4.1:-4096139 MS.gene048973:intron
GAGCACGCAATCTCTGAGGA+TGG 0.582321 4.1:-4097641 MS.gene048973:CDS
AGCTGCAACAACATGTTATG+TGG 0.584192 4.1:-4092539 MS.gene048973:CDS
TGCGAGAAAGCTCGTTAGTG+TGG 0.589054 4.1:+4096148 None:intergenic
GATGAAGAAGATGGTTGAAA+CGG 0.596299 4.1:-4097472 MS.gene048973:CDS
ACATACATGAGGAGATTGAG+AGG 0.597540 4.1:+4098005 None:intergenic
GTTGGCGAAGAGAGGGGCGA+GGG 0.600330 4.1:-4098183 MS.gene048973:CDS
GTGAAAACGAGTAACGAAGT+TGG 0.605876 4.1:+4098040 None:intergenic
TTGTTGACTAGAAACAATGC+TGG 0.607911 4.1:-4097677 MS.gene048973:intron
GCGTGTGTTGGCGAAGAGAG+GGG 0.611397 4.1:-4098189 MS.gene048973:CDS
AACGTGTCGTCCGCAATACA+CGG 0.612162 4.1:-4097417 MS.gene048973:CDS
TGTGAACTGCGTTCATCCGG+GGG 0.618545 4.1:-4095769 MS.gene048973:CDS
TGTCGTCCGCAATACACGGT+TGG 0.620494 4.1:-4097413 MS.gene048973:CDS
AACAAGAGGAAGAATAGTGA+CGG 0.621467 4.1:-4098123 MS.gene048973:CDS
GAAGATGGTTGAAACGGCAA+AGG 0.624723 4.1:-4097466 MS.gene048973:CDS
CTCGTTAGTGTGGAAAACGT+TGG 0.627285 4.1:+4096158 None:intergenic
TTGAAACGGCAAAGGAGACA+GGG 0.627738 4.1:-4097458 MS.gene048973:CDS
GAGATTGAGAGGGAAACCGA+TGG 0.630117 4.1:+4098016 None:intergenic
AGGAGACAGGGATACAAGGA+AGG 0.631549 4.1:-4097446 MS.gene048973:CDS
GGTTAAATACATAATCGGAT+CGG 0.635138 4.1:-4098333 MS.gene048973:CDS
TTATGATGGCGGTGATGGAA+CGG 0.635306 4.1:+4098246 None:intergenic
CATACATGAGGAGATTGAGA+GGG 0.645624 4.1:+4098006 None:intergenic
GTTATGTGGCAACTCACCCA+AGG 0.646322 4.1:-4092525 MS.gene048973:CDS
GGAAAGAGCATAAGCACGTG+TGG 0.646988 4.1:+4096188 None:intergenic
ATCGGATCGGCTGGTCCAAG+CGG 0.647423 4.1:-4098320 MS.gene048973:CDS
AGTGACGGAGTGTCCTGAAG+CGG 0.658575 4.1:-4098108 MS.gene048973:CDS
GAACAAGTCACCGAAACCTG+CGG 0.682551 4.1:-4098275 MS.gene048973:CDS
AACGCAGTTCACAGTCACGT+TGG 0.685771 4.1:+4095779 None:intergenic
AGTAAACCAACCGTGTATTG+CGG 0.688794 4.1:+4097407 None:intergenic
ATCACCGCCATCATAACAGG+TGG 0.694207 4.1:-4098239 MS.gene048973:CDS
GGTTTCGGTGACTTGTTCGG+CGG 0.695585 4.1:+4098280 None:intergenic
AGAAGAGCACGCAATCTCTG+AGG 0.699359 4.1:-4097645 MS.gene048973:CDS
AGACTCACCAGAGAGCGTGA+AGG 0.708096 4.1:-4095735 MS.gene048973:CDS
TGTTGACTAGAAACAATGCT+GGG 0.713580 4.1:-4097676 MS.gene048973:intron
CGTACCACCTGTTATGATGG+CGG 0.715495 4.1:+4098235 None:intergenic
TGGTACGTCAGGAATCGGAG+CGG 0.757116 4.1:-4098219 MS.gene048973:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGGAAAATTAAAAA+AGG + chr4.1:4096398-4096417 None:intergenic 10.0%
!! AAAATACTAGTAAATAATTT+GGG - chr4.1:4094875-4094894 MS.gene048973:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr4.1:4093542-4093561 None:intergenic 10.0%
!! ATAAAATAAACTATATAAAC+TGG + chr4.1:4094833-4094852 None:intergenic 10.0%
!! CAAATTCAAATAAATAAATA+TGG + chr4.1:4092998-4093017 None:intergenic 10.0%
!! GATAAATAAATAAATAAAAC+TGG - chr4.1:4097030-4097049 MS.gene048973:intron 10.0%
!! TAAAATACTAGTAAATAATT+TGG - chr4.1:4094874-4094893 MS.gene048973:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr4.1:4093543-4093562 None:intergenic 10.0%
!! TTGATAAAAAAATATATTTG+AGG - chr4.1:4094017-4094036 MS.gene048973:intron 10.0%
!!! AAAATTTCACTTTTTAAATA+TGG + chr4.1:4094729-4094748 None:intergenic 10.0%
!!! ATAATTTTATAAAAAAGTCA+AGG + chr4.1:4094163-4094182 None:intergenic 10.0%
!!! ATATATTTTTGTTATTTGAT+GGG - chr4.1:4093147-4093166 MS.gene048973:intron 10.0%
!!! GAATTTTAATTAACTTTAAT+TGG - chr4.1:4097702-4097721 MS.gene048973:intron 10.0%
!!! GATAATACAAAATTTTAAAA+GGG - chr4.1:4097223-4097242 MS.gene048973:intron 10.0%
!!! TATATATTTTTGTTATTTGA+TGG - chr4.1:4093146-4093165 MS.gene048973:intron 10.0%
!!! TTTTATTGAACATAAAATAA+GGG + chr4.1:4097864-4097883 None:intergenic 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG - chr4.1:4096588-4096607 MS.gene048973:intron 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG + chr4.1:4096607-4096588 None:intergenic 10.0%
!!! TTTTTATTGAACATAAAATA+AGG + chr4.1:4097865-4097884 None:intergenic 10.0%
!! AAAATTCAAGGTTATTAATT+AGG + chr4.1:4098345-4098364 None:intergenic 15.0%
!! AAATACTAGTAAATAATTTG+GGG - chr4.1:4094876-4094895 MS.gene048973:intron 15.0%
!! AATATATTTGAGGATTAAAT+TGG - chr4.1:4094027-4094046 MS.gene048973:intron 15.0%
!! AATTAATCAAAATTAACTAC+TGG - chr4.1:4097652-4097671 MS.gene048973:CDS 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr4.1:4093477-4093496 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr4.1:4093541-4093560 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr4.1:4093478-4093497 None:intergenic 15.0%
!! TGGAGAAATTAAAAAAAAAA+TGG + chr4.1:4096412-4096431 None:intergenic 15.0%
!! TTTATTTGAATTTGAATGAT+TGG - chr4.1:4093004-4093023 MS.gene048973:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - chr4.1:4096589-4096608 MS.gene048973:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG + chr4.1:4096608-4096589 None:intergenic 15.0%
!!! AAAATTCTGAAATCAATTAA+CGG + chr4.1:4095075-4095094 None:intergenic 15.0%
!!! AAATAAGATGTATAGATTTT+AGG - chr4.1:4095303-4095322 MS.gene048973:intron 15.0%
!!! AATTTTTTTTTTTGGACAAA+AGG + chr4.1:4093827-4093846 None:intergenic 15.0%
!!! AGAAATTGATGATAATTTTT+TGG - chr4.1:4096235-4096254 MS.gene048973:intron 15.0%
!!! AGTTAATTTTGATTAATTGA+TGG + chr4.1:4097650-4097669 None:intergenic 15.0%
!!! ATTTGATTTTAGAATAGAAA+AGG + chr4.1:4095098-4095117 None:intergenic 15.0%
!!! CAAAAGGTAATTTTTTTTTT+TGG + chr4.1:4093835-4093854 None:intergenic 15.0%
!!! GGATAATACAAAATTTTAAA+AGG - chr4.1:4097222-4097241 MS.gene048973:intron 15.0%
!!! GTTAATTTTGATTAATTGAT+GGG + chr4.1:4097649-4097668 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - chr4.1:4096587-4096606 MS.gene048973:intron 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG + chr4.1:4096606-4096587 None:intergenic 15.0%
!!! TCATCTATTGAAATTTTTTT+TGG - chr4.1:4096771-4096790 MS.gene048973:intron 15.0%
!!! TCATTTATAAAGTTTTTTCT+AGG - chr4.1:4097595-4097614 MS.gene048973:intron 15.0%
!!! TGATGACAAATATATTTTAT+AGG - chr4.1:4097972-4097991 MS.gene048973:intron 15.0%
!! AAAAATAAATAATATCCACG+TGG - chr4.1:4096467-4096486 MS.gene048973:intron 20.0%
!! AAAAATAAATAATATCCACG+TGG + chr4.1:4096486-4096467 None:intergenic 20.0%
!! AAAACACAACAACAAATTAA+TGG + chr4.1:4098098-4098117 None:intergenic 20.0%
!! AATAAATATTCATGAGTAGA+AGG - chr4.1:4097411-4097430 MS.gene048973:CDS 20.0%
!! AGAATAAGAAAAGAAAATGT+TGG + chr4.1:4096746-4096765 None:intergenic 20.0%
!! TATAAGCTTGTGTAATTTAA+TGG - chr4.1:4097467-4097486 MS.gene048973:CDS 20.0%
!! TATAAGTGTAAGTAACATAA+AGG - chr4.1:4097294-4097313 MS.gene048973:intron 20.0%
!! TATATACATATACATACATG+AGG + chr4.1:4092713-4092732 None:intergenic 20.0%
!! TATTCACATTGTTATAAAGA+AGG - chr4.1:4093711-4093730 MS.gene048973:intron 20.0%
!! TTAAAGAAATGAAGACAAAT+CGG + chr4.1:4095944-4095963 None:intergenic 20.0%
!! TTCAAGAATATCTTATATGT+GGG + chr4.1:4097897-4097916 None:intergenic 20.0%
!! TTCATTATAATTTCATGTGT+TGG - chr4.1:4092827-4092846 MS.gene048973:intron 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - chr4.1:4096590-4096609 MS.gene048973:intron 20.0%
!! TTTATTTGTACACATAATGA+TGG - chr4.1:4097201-4097220 MS.gene048973:intron 20.0%
!! TTTCAAGAATATCTTATATG+TGG + chr4.1:4097898-4097917 None:intergenic 20.0%
!!! ATCTATTCATTCATCTTTTA+TGG - chr4.1:4094610-4094629 MS.gene048973:intron 20.0%
!!! ATTTTTTTTTAAAAGCTTGC+TGG + chr4.1:4096446-4096465 None:intergenic 20.0%
!!! CTTCATTTCTTTAATTTTCA+AGG - chr4.1:4095950-4095969 MS.gene048973:intron 20.0%
!!! CTTGATTTAATTTGAGATTT+TGG + chr4.1:4097159-4097178 None:intergenic 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + chr4.1:4093408-4093427 None:intergenic 20.0%
!!! TATACATCTTATTTGATCAA+TGG + chr4.1:4095297-4095316 None:intergenic 20.0%
!!! TATTTTTTTTAAAAGCTTGC+TGG - chr4.1:4095519-4095538 MS.gene048973:intron 20.0%
!!! TTCACTTTTTAAATATGGAT+AGG + chr4.1:4094724-4094743 None:intergenic 20.0%
! AAGGTAAATTCTTAGATAGT+TGG + chr4.1:4093808-4093827 None:intergenic 25.0%
! AAGGTTATTAATTAGGTCAA+AGG + chr4.1:4098338-4098357 None:intergenic 25.0%
! AATATGTGTAATCAATGCAT+CGG - chr4.1:4094127-4094146 MS.gene048973:intron 25.0%
! AATTGAGATCTGAAAAACAA+TGG - chr4.1:4097248-4097267 MS.gene048973:intron 25.0%
! AATTGGCTATCATAAAACAA+AGG - chr4.1:4094044-4094063 MS.gene048973:intron 25.0%
! ACCCTTAGAAATCATTAATT+CGG + chr4.1:4098305-4098324 None:intergenic 25.0%
! ACTACAAACACATTCATAAA+TGG + chr4.1:4094283-4094302 None:intergenic 25.0%
! AGAAATCATTAATTCGGAAA+CGG + chr4.1:4098299-4098318 None:intergenic 25.0%
! AGGTAAATTCTTAGATAGTT+GGG + chr4.1:4093807-4093826 None:intergenic 25.0%
! ATAGTGTATTGTATTTACCT+GGG + chr4.1:4095167-4095186 None:intergenic 25.0%
! ATTAATTAATATTGTGGTGC+AGG - chr4.1:4093185-4093204 MS.gene048973:intron 25.0%
! ATTGGCTATCATAAAACAAA+GGG - chr4.1:4094045-4094064 MS.gene048973:intron 25.0%
! CATGATAAGTTACCATTTAA+AGG + chr4.1:4094105-4094124 None:intergenic 25.0%
! CCTGTATATAAGTTTATTTG+CGG + chr4.1:4098144-4098163 None:intergenic 25.0%
! CTTAACCAAAATTTCATTCA+AGG + chr4.1:4093653-4093672 None:intergenic 25.0%
! GAAACGGTTAAATACATAAT+CGG - chr4.1:4092366-4092385 MS.gene048973:CDS 25.0%
! GTTGAAAATAATAAACAGAG+TGG + chr4.1:4097122-4097141 None:intergenic 25.0%
! TATAGTGTATTGTATTTACC+TGG + chr4.1:4095168-4095187 None:intergenic 25.0%
! TATTAAATATGTGCAGGAAA+TGG - chr4.1:4094899-4094918 MS.gene048973:intron 25.0%
! TCCGAATTAATGATTTCTAA+GGG - chr4.1:4098301-4098320 MS.gene048973:CDS 25.0%
! TTACTCACCTAAATAATTAG+TGG + chr4.1:4093106-4093125 None:intergenic 25.0%
! TTATTATTACGAGAAGAGAA+TGG + chr4.1:4097795-4097814 None:intergenic 25.0%
! TTCAAATTGTTTGTGAGTTA+TGG + chr4.1:4096911-4096930 None:intergenic 25.0%
! TTCCGAATTAATGATTTCTA+AGG - chr4.1:4098300-4098319 MS.gene048973:CDS 25.0%
! TTGTTTGATGTTGTATAGAT+CGG - chr4.1:4095973-4095992 MS.gene048973:intron 25.0%
!! AAAAATGTTGATGAAGAAGA+TGG - chr4.1:4093223-4093242 MS.gene048973:intron 25.0%
!! GATCAATGGTTTAAGTTAAT+TGG + chr4.1:4095283-4095302 None:intergenic 25.0%
!! GTTTCTGTTTACTAATTTGT+TGG - chr4.1:4094448-4094467 MS.gene048973:intron 25.0%
!! TTACACCTTGAATGAAATTT+TGG - chr4.1:4093645-4093664 MS.gene048973:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + chr4.1:4093431-4093450 None:intergenic 25.0%
!! TTTAAGTTAATTGGTCAAGT+TGG + chr4.1:4095274-4095293 None:intergenic 25.0%
!!! AACAATAACACTCTTGTTTT+GGG - chr4.1:4095012-4095031 MS.gene048973:intron 25.0%
!!! AATTACCGACAATTTTTTAG+AGG + chr4.1:4097624-4097643 None:intergenic 25.0%
!!! CATCATTTTCATTTCAAGTA+CGG + chr4.1:4094385-4094404 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + chr4.1:4093409-4093428 None:intergenic 25.0%
!!! GGTTCAAATATTGTTTTGAA+GGG + chr4.1:4097774-4097793 None:intergenic 25.0%
!!! GTTCAAATATTGTTTTGAAG+GGG + chr4.1:4097773-4097792 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + chr4.1:4093430-4093449 None:intergenic 25.0%
!!! TGGTTCAAATATTGTTTTGA+AGG + chr4.1:4097775-4097794 None:intergenic 25.0%
!!! TGTTTTTGATCCATATTTTG+AGG - chr4.1:4096352-4096371 MS.gene048973:intron 25.0%
AAAAGGACATCATGAATTTG+CGG + chr4.1:4096381-4096400 None:intergenic 30.0%
AATAATTAGCAAGAACAGGT+AGG + chr4.1:4094807-4094826 None:intergenic 30.0%
AATATGGACCAATACATGTA+TGG - chr4.1:4097506-4097525 MS.gene048973:intron 30.0%
AATCTAACAGAAGAGAAGAA+AGG + chr4.1:4096025-4096044 None:intergenic 30.0%
AATGTTCTCTATTTGTGCAT+GGG - chr4.1:4095215-4095234 MS.gene048973:intron 30.0%
AATTATAGCAAATGAAGTCG+TGG + chr4.1:4094779-4094798 None:intergenic 30.0%
ACAACATGCGAATACATTAT+TGG - chr4.1:4098028-4098047 MS.gene048973:CDS 30.0%
ACCTAAATAATTAGTGGCAA+AGG + chr4.1:4093100-4093119 None:intergenic 30.0%
ACCTTTGCCACTAATTATTT+AGG - chr4.1:4093096-4093115 MS.gene048973:intron 30.0%
ATAAATCTCGACACTTCTAA+TGG + chr4.1:4092900-4092919 None:intergenic 30.0%
ATAATTAGCAAGAACAGGTA+GGG + chr4.1:4094806-4094825 None:intergenic 30.0%
ATAGAGGATCGATGTTAATT+TGG + chr4.1:4096808-4096827 None:intergenic 30.0%
ATATGGACCAATACATGTAT+GGG - chr4.1:4097507-4097526 MS.gene048973:intron 30.0%
ATGGATGTAGAAAAAACCAA+TGG + chr4.1:4097082-4097101 None:intergenic 30.0%
ATTAAATCAAGCTTCAGTTG+TGG - chr4.1:4097168-4097187 MS.gene048973:intron 30.0%
ATTATAGCAAATGAAGTCGT+GGG + chr4.1:4094778-4094797 None:intergenic 30.0%
ATTTGGACCCATTGAAAAAT+TGG - chr4.1:4095247-4095266 MS.gene048973:intron 30.0%
CAAAATTGCAGGTTAACAAA+AGG + chr4.1:4093851-4093870 None:intergenic 30.0%
CAGGAAATTTGTATACAAAG+TGG - chr4.1:4097677-4097696 MS.gene048973:intron 30.0%
CCGCAAATAAACTTATATAC+AGG - chr4.1:4098141-4098160 MS.gene048973:CDS 30.0%
GAGAAATAATTAGCAAGAAC+AGG + chr4.1:4094811-4094830 None:intergenic 30.0%
GATAGACTACCATAAAATCT+AGG + chr4.1:4096664-4096683 None:intergenic 30.0%
GGACACAAAAATGATAAACA+TGG + chr4.1:4097101-4097120 None:intergenic 30.0%
GGTATATATACATACTCTTG+TGG + chr4.1:4093786-4093805 None:intergenic 30.0%
GGTTAAATACATAATCGGAT+CGG - chr4.1:4092371-4092390 MS.gene048973:CDS 30.0%
TAGTGTATTGTATTTACCTG+GGG + chr4.1:4095166-4095185 None:intergenic 30.0%
TCAAAATTAACTACTGGATC+AGG - chr4.1:4097658-4097677 MS.gene048973:CDS 30.0%
TCAGAAATCTTGATCCAATA+TGG - chr4.1:4097490-4097509 MS.gene048973:CDS 30.0%
TGCATGGGTAAAGTTTAATT+TGG - chr4.1:4095230-4095249 MS.gene048973:intron 30.0%
TGCCAAAGAATCAATACTTA+GGG - chr4.1:4096560-4096579 MS.gene048973:intron 30.0%
TGCCAAAGAATCAATACTTA+GGG + chr4.1:4096579-4096560 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr4.1:4093534-4093553 None:intergenic 30.0%
TTCTTCTCTTCTGTTAGATT+CGG - chr4.1:4096025-4096044 MS.gene048973:intron 30.0%
TTGTAGTTTCAATGCATTCA+AGG - chr4.1:4094296-4094315 MS.gene048973:intron 30.0%
TTGTATTTGAATGTTCTTGC+TGG - chr4.1:4096199-4096218 MS.gene048973:CDS 30.0%
! AGAAAAGAAAATGTTGGTGA+TGG + chr4.1:4096740-4096759 None:intergenic 30.0%
! AGTTATGGTTGTTGGTATTT+TGG + chr4.1:4096896-4096915 None:intergenic 30.0%
! ATAATTTCATGTGTTGGTGT+CGG - chr4.1:4092833-4092852 MS.gene048973:intron 30.0%
! ATACATGTATTGGTCCATAT+TGG + chr4.1:4097507-4097526 None:intergenic 30.0%
! ATCAGAACAAGCTAACTTTT+GGG + chr4.1:4097013-4097032 None:intergenic 30.0%
! CTTGCTGGCATTTTTAAATT+GGG - chr4.1:4095534-4095553 MS.gene048973:intron 30.0%
! GGTTACCTCTAAAAAATTGT+CGG - chr4.1:4097616-4097635 MS.gene048973:CDS 30.0%
! GTTTTCTCCAACAATTCTTA+CGG - chr4.1:4097054-4097073 MS.gene048973:intron 30.0%
! TATCAGAACAAGCTAACTTT+TGG + chr4.1:4097014-4097033 None:intergenic 30.0%
! TGCAATTTTGCCAAAACTTT+GGG - chr4.1:4093861-4093880 MS.gene048973:intron 30.0%
! TTATTTGTCACCTTTTGTTG+CGG + chr4.1:4093355-4093374 None:intergenic 30.0%
! TTGCTGGCATTTTTAAATTG+GGG - chr4.1:4095535-4095554 MS.gene048973:intron 30.0%
! TTTAGGCTTAATTGCACTTT+TGG - chr4.1:4095320-4095339 MS.gene048973:intron 30.0%
!! AAGTTGGACCAATTTTTCAA+TGG + chr4.1:4095258-4095277 None:intergenic 30.0%
!! AGTTGGACCAATTTTTCAAT+GGG + chr4.1:4095257-4095276 None:intergenic 30.0%
!! GAACAATAACACTCTTGTTT+TGG - chr4.1:4095011-4095030 MS.gene048973:intron 30.0%
!!! AACTTTTGGGTTGAAATCTT+AGG + chr4.1:4097000-4097019 None:intergenic 30.0%
!!! AGTCCTCGTAATTTGTTTTA+GGG + chr4.1:4094237-4094256 None:intergenic 30.0%
!!! ATCTTTGGATTTGCTGATTT+TGG - chr4.1:4096265-4096284 MS.gene048973:intron 30.0%
!!! ATGATGTTCTTGAGGTTTTT+TGG - chr4.1:4096320-4096339 MS.gene048973:intron 30.0%
!!! TAGTCCTCGTAATTTGTTTT+AGG + chr4.1:4094238-4094257 None:intergenic 30.0%
!!! TATTGATTCTTTGGCAGTTT+TGG - chr4.1:4095411-4095430 MS.gene048973:intron 30.0%
!!! TATTGATTCTTTGGCAGTTT+TGG + chr4.1:4095430-4095411 None:intergenic 30.0%
!!! TGCAGATTTAGTTTTCTTCT+TGG - chr4.1:4095117-4095136 MS.gene048973:intron 30.0%
!!! TTTTTTGGAGTGTAGATCTT+TGG - chr4.1:4096250-4096269 MS.gene048973:intron 30.0%
AAATGAAGACAAATCGGTGA+AGG + chr4.1:4095938-4095957 None:intergenic 35.0%
AACAAGAGGAAGAATAGTGA+CGG - chr4.1:4092581-4092600 MS.gene048973:intron 35.0%
AACTGAAGCTTCAAGGTTAT+GGG - chr4.1:4098273-4098292 MS.gene048973:CDS 35.0%
AGACCCTAAAACAAATTACG+AGG - chr4.1:4094231-4094250 MS.gene048973:intron 35.0%
AGATATGGTCTTTATACGTG+AGG - chr4.1:4093909-4093928 MS.gene048973:intron 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr4.1:4093395-4093414 None:intergenic 35.0%
AGTTATGTTGGATCCCAATT+TGG + chr4.1:4098257-4098276 None:intergenic 35.0%
ATAACTATAATCTCCGCTTC+AGG + chr4.1:4092612-4092631 None:intergenic 35.0%
ATCAACGACCAAGTCAAAAA+TGG - chr4.1:4096521-4096540 MS.gene048973:intron 35.0%
ATCAACGACCAAGTCAAAAA+TGG + chr4.1:4096540-4096521 None:intergenic 35.0%
ATGAAACATGCTTATCAGTG+TGG + chr4.1:4096872-4096891 None:intergenic 35.0%
ATGTATTCGCTCCACTATAT+CGG + chr4.1:4097438-4097457 None:intergenic 35.0%
CAATGTTCTCTATTTGTGCA+TGG - chr4.1:4095214-4095233 MS.gene048973:intron 35.0%
CCAAAGAATCAATACTTAGG+GGG - chr4.1:4096562-4096581 MS.gene048973:intron 35.0%
CCAAAGAATCAATACTTAGG+GGG + chr4.1:4096581-4096562 None:intergenic 35.0%
CGAAGAAAAAGAGGTGATAA+GGG + chr4.1:4095785-4095804 None:intergenic 35.0%
CTAGTTACACTTCCAAGTTT+CGG - chr4.1:4094330-4094349 MS.gene048973:intron 35.0%
CTGCCAAAGAATCAATACTT+AGG - chr4.1:4096559-4096578 MS.gene048973:intron 35.0%
CTGCCAAAGAATCAATACTT+AGG + chr4.1:4096578-4096559 None:intergenic 35.0%
CTTCTGTTTATGAGGTTTGA+AGG - chr4.1:4096294-4096313 MS.gene048973:intron 35.0%
GAAACCTCAACTTCCAAATT+GGG - chr4.1:4098241-4098260 MS.gene048973:CDS 35.0%
GAGATCTGAAAAACAATGGA+TGG - chr4.1:4097252-4097271 MS.gene048973:intron 35.0%
GATGAAGAAGATGGTTGAAA+CGG - chr4.1:4093232-4093251 MS.gene048973:intron 35.0%
GCCAAAGAATCAATACTTAG+GGG - chr4.1:4096561-4096580 MS.gene048973:intron 35.0%
GCCAAAGAATCAATACTTAG+GGG + chr4.1:4096580-4096561 None:intergenic 35.0%
GTTCCAAATCGAAGAAAAAG+AGG + chr4.1:4095794-4095813 None:intergenic 35.0%
TAACTGAAGCTTCAAGGTTA+TGG - chr4.1:4098272-4098291 MS.gene048973:CDS 35.0%
TAATTAGCAAGAACAGGTAG+GGG + chr4.1:4094805-4094824 None:intergenic 35.0%
TATAGTAGATGAGATCGAGA+TGG + chr4.1:4094673-4094692 None:intergenic 35.0%
TATTGTATTTACCTGGGGAA+TGG + chr4.1:4095161-4095180 None:intergenic 35.0%
TCGAAGAAAAAGAGGTGATA+AGG + chr4.1:4095786-4095805 None:intergenic 35.0%
TGAAGCGGAGATTATAGTTA+TGG - chr4.1:4092611-4092630 MS.gene048973:intron 35.0%
TGTTTGTGAGTTATGGTTGT+TGG + chr4.1:4096904-4096923 None:intergenic 35.0%
TTATAGCAAATGAAGTCGTG+GGG + chr4.1:4094777-4094796 None:intergenic 35.0%
! CACATTTTTGTTCCGAAACT+TGG + chr4.1:4094345-4094364 None:intergenic 35.0%
! CCCTAACTTTTCAAAAGTTG+CGG - chr4.1:4095345-4095364 MS.gene048973:intron 35.0%
! CCCTATCTTTTCAAAAGTTG+CGG + chr4.1:4096622-4096641 None:intergenic 35.0%
! CTGCAATTTTGCCAAAACTT+TGG - chr4.1:4093860-4093879 MS.gene048973:intron 35.0%
! CTTTTCAAAAGTTGCGGTTA+TGG - chr4.1:4095351-4095370 MS.gene048973:intron 35.0%
! CTTTTCAAAAGTTGCGGTTA+TGG + chr4.1:4095370-4095351 None:intergenic 35.0%
! GGTTTGTTCTTCTGTTTATG+AGG - chr4.1:4096286-4096305 MS.gene048973:intron 35.0%
! TCACCTCTTTTTCTTCGATT+TGG - chr4.1:4095788-4095807 MS.gene048973:CDS 35.0%
! TGTTGACTAGAAACAATGCT+GGG - chr4.1:4093028-4093047 MS.gene048973:intron 35.0%
! TTGGGGTATTAAATATGTGC+AGG - chr4.1:4094893-4094912 MS.gene048973:intron 35.0%
! TTGTTGACTAGAAACAATGC+TGG - chr4.1:4093027-4093046 MS.gene048973:intron 35.0%
!! ACCGCAACTTTTGAAAAGAT+AGG - chr4.1:4096618-4096637 MS.gene048973:intron 35.0%
!! ACCGCAACTTTTGAAAAGTT+AGG + chr4.1:4095349-4095368 None:intergenic 35.0%
!! CAAAGTTTTGGCAAAATTGC+AGG + chr4.1:4093862-4093881 None:intergenic 35.0%
!! CCGCAACTTTTGAAAAGATA+GGG - chr4.1:4096619-4096638 MS.gene048973:intron 35.0%
!! CCGCAACTTTTGAAAAGTTA+GGG + chr4.1:4095348-4095367 None:intergenic 35.0%
!! CGCAACTTTTGAAAAGATAG+GGG - chr4.1:4096620-4096639 MS.gene048973:intron 35.0%
!! CGCAACTTTTGAAAAGTTAG+GGG + chr4.1:4095347-4095366 None:intergenic 35.0%
!! GCAACTTTTGAAAAGATAGG+GGG - chr4.1:4096621-4096640 MS.gene048973:intron 35.0%
!! GCAACTTTTGAAAAGTTAGG+GGG + chr4.1:4095346-4095365 None:intergenic 35.0%
!! GCTTGCTGGCATTTTTAAAT+TGG - chr4.1:4095533-4095552 MS.gene048973:intron 35.0%
!! TGAGTGTTGTTTGTGTTCAA+TGG - chr4.1:4096974-4096993 MS.gene048973:intron 35.0%
!! TGAGTTCATTTCTAGTGACT+CGG - chr4.1:4096065-4096084 MS.gene048973:intron 35.0%
!! TGCTAGCTTTGAAGAATTGT+AGG + chr4.1:4097743-4097762 None:intergenic 35.0%
!!! CAAATATTGTTTTGAAGGGG+AGG + chr4.1:4097770-4097789 None:intergenic 35.0%
!!! CTTGTTTTGGGTCAAAGTTT+TGG - chr4.1:4095024-4095043 MS.gene048973:intron 35.0%
AAAAATGCGGAGGAAACAAG+AGG - chr4.1:4092567-4092586 MS.gene048973:intron 40.0%
AAAAGAGAGCAAAGTGTGAG+AGG - chr4.1:4097915-4097934 MS.gene048973:intron 40.0%
AAACATGCTTATCAGTGTGG+TGG + chr4.1:4096869-4096888 None:intergenic 40.0%
AAATACATAATCGGATCGGC+TGG - chr4.1:4092375-4092394 MS.gene048973:CDS 40.0%
AACAGAAGAGAAGAAAGGAG+AGG + chr4.1:4096020-4096039 None:intergenic 40.0%
AACCGAATCCAACATCAAGA+AGG + chr4.1:4095893-4095912 None:intergenic 40.0%
AAGTAGAGTCGTTGAATGAG+AGG - chr4.1:4098000-4098019 MS.gene048973:intron 40.0%
AATGGCACCGTAAGAATTGT+TGG + chr4.1:4097064-4097083 None:intergenic 40.0%
ACATACATGAGGAGATTGAG+AGG + chr4.1:4092702-4092721 None:intergenic 40.0%
ACCAAGTCAAAAATGGACCA+GGG - chr4.1:4096528-4096547 MS.gene048973:intron 40.0%
ACCAAGTCAAAAATGGACCA+GGG + chr4.1:4096547-4096528 None:intergenic 40.0%
AGAAAAAGAGGTGATAAGGG+TGG + chr4.1:4095782-4095801 None:intergenic 40.0%
AGAGGAAGATTAGTGGTTGT+GGG + chr4.1:4095614-4095633 None:intergenic 40.0%
AGCTGCAACAACATGTTATG+TGG - chr4.1:4098165-4098184 MS.gene048973:CDS 40.0%
AGTAAACCAACCGTGTATTG+CGG + chr4.1:4093300-4093319 None:intergenic 40.0%
ATAAGGGTGGAGGCTTATTA+CGG + chr4.1:4095769-4095788 None:intergenic 40.0%
ATCAAAGGAGAGAGAGATAC+TGG + chr4.1:4096714-4096733 None:intergenic 40.0%
CACCTTCTTGATGTTGGATT+CGG - chr4.1:4095888-4095907 MS.gene048973:intron 40.0%
CATACATGAGGAGATTGAGA+GGG + chr4.1:4092701-4092720 None:intergenic 40.0%
CATATCTCTTCCGAGTTACA+TGG + chr4.1:4093896-4093915 None:intergenic 40.0%
CATGTAACTCGGAAGAGATA+TGG - chr4.1:4093894-4093913 MS.gene048973:intron 40.0%
CCAACATAACTGAAGCTTCA+AGG - chr4.1:4098266-4098285 MS.gene048973:CDS 40.0%
CCTTGAAGCTTCAGTTATGT+TGG + chr4.1:4098269-4098288 None:intergenic 40.0%
CGAAACCTCAACTTCCAAAT+TGG - chr4.1:4098240-4098259 MS.gene048973:CDS 40.0%
CTCAACCTTCATCACAAACT+CGG + chr4.1:4096167-4096186 None:intergenic 40.0%
CTCATATATGCCGCAACAAA+AGG - chr4.1:4093342-4093361 MS.gene048973:intron 40.0%
CTGCACTGCAGACATAAAAA+AGG + chr4.1:4095052-4095071 None:intergenic 40.0%
GAAGGTTCATGATGTTCTTG+AGG - chr4.1:4096312-4096331 MS.gene048973:intron 40.0%
GCCAGTAATACCATGTAACT+CGG - chr4.1:4093883-4093902 MS.gene048973:intron 40.0%
GCTGGTGAGTAAACATATAG+AGG + chr4.1:4096824-4096843 None:intergenic 40.0%
GGAGAAAGAACAAGTAAGTC+TGG + chr4.1:4095845-4095864 None:intergenic 40.0%
GGTGAAGGAAGAAGAAAGAA+CGG + chr4.1:4095923-4095942 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + chr4.1:4093394-4093413 None:intergenic 40.0%
GTGAAAACGAGTAACGAAGT+TGG + chr4.1:4092667-4092686 None:intergenic 40.0%
GTTTACGTAGAACATGCACA+AGG + chr4.1:4097549-4097568 None:intergenic 40.0%
GTTTGGACCCATACATGTAT+TGG + chr4.1:4097517-4097536 None:intergenic 40.0%
TCCGAGTTACATGGTATTAC+TGG + chr4.1:4093887-4093906 None:intergenic 40.0%
TTGTGATGAAGGTTGAGGTT+TGG - chr4.1:4096170-4096189 MS.gene048973:CDS 40.0%
! ATTAGGTCAAAGGCAGCTTT+TGG + chr4.1:4098328-4098347 None:intergenic 40.0%
! CACTGGTTAAGGCCTTTAAA+TGG - chr4.1:4094090-4094109 MS.gene048973:intron 40.0%
! GATATAGTGGAGCGAATACA+TGG - chr4.1:4097437-4097456 MS.gene048973:CDS 40.0%
! GTATTACTGGCCCAAAGTTT+TGG + chr4.1:4093874-4093893 None:intergenic 40.0%
! GTGAAAAACCAAACTGACTC+AGG - chr4.1:4093569-4093588 MS.gene048973:intron 40.0%
! GTTACTCGTTTTCACTCCAT+CGG - chr4.1:4092672-4092691 MS.gene048973:intron 40.0%
!! AACAATTCTTACGGTGCCAT+TGG - chr4.1:4097063-4097082 MS.gene048973:intron 40.0%
!! ACGTGAGGTGTTGTTACTAT+AGG - chr4.1:4093924-4093943 MS.gene048973:intron 40.0%
!! CCCCCTAAGTATTGATTCTT+TGG - chr4.1:4095402-4095421 MS.gene048973:intron 40.0%
!! CCCCCTAAGTATTGATTCTT+TGG + chr4.1:4095421-4095402 None:intergenic 40.0%
!! TGTTGGTGATGGTGTATCAA+AGG + chr4.1:4096729-4096748 None:intergenic 40.0%
!! TTCTTCGATTTGGAACTGCA+AGG - chr4.1:4095798-4095817 MS.gene048973:intron 40.0%
!!! GCTTGCTGGCATTTTGAAAT+TGG + chr4.1:4096432-4096451 None:intergenic 40.0%
AAAAGAGGTGATAAGGGTGG+AGG + chr4.1:4095779-4095798 None:intergenic 45.0%
AAGAGTGAGAGAGCAACTCA+TGG + chr4.1:4096691-4096710 None:intergenic 45.0%
AGAAGGGAGAGGAAGATTAG+TGG + chr4.1:4095621-4095640 None:intergenic 45.0%
AGAAGGTTGGAGAGAGAAAG+TGG - chr4.1:4097338-4097357 MS.gene048973:intron 45.0%
AGAGAAAGTGGAGGAGGAAA+AGG - chr4.1:4097350-4097369 MS.gene048973:intron 45.0%
AGGAGAAGGGAGAGGAAAAA+GGG + chr4.1:4095689-4095708 None:intergenic 45.0%
ATCATAACAGGTGGTACGTC+AGG - chr4.1:4092474-4092493 MS.gene048973:CDS 45.0%
ATGCTTATCAGTGTGGTGGT+TGG + chr4.1:4096865-4096884 None:intergenic 45.0%
CAACATCAAGAAGGTGAGCA+AGG + chr4.1:4095884-4095903 None:intergenic 45.0%
CAAGTCAAAAATGGACCAGG+GGG - chr4.1:4096530-4096549 MS.gene048973:intron 45.0%
CAAGTCAAAAATGGACCAGG+GGG + chr4.1:4096549-4096530 None:intergenic 45.0%
CCAAGTCAAAAATGGACCAG+GGG - chr4.1:4096529-4096548 MS.gene048973:intron 45.0%
CCAAGTCAAAAATGGACCAG+GGG + chr4.1:4096548-4096529 None:intergenic 45.0%
CGAGTTTGTGATGAAGGTTG+AGG - chr4.1:4096165-4096184 MS.gene048973:CDS 45.0%
CTCGTTAGTGTGGAAAACGT+TGG + chr4.1:4094549-4094568 None:intergenic 45.0%
CTTGCTCACCTTCTTGATGT+TGG - chr4.1:4095882-4095901 MS.gene048973:intron 45.0%
GAAGATGGTTGAAACGGCAA+AGG - chr4.1:4093238-4093257 MS.gene048973:intron 45.0%
GACCAAGTCAAAAATGGACC+AGG - chr4.1:4096527-4096546 MS.gene048973:intron 45.0%
GACCAAGTCAAAAATGGACC+AGG + chr4.1:4096546-4096527 None:intergenic 45.0%
GAGAAAGTGGAGGAGGAAAA+GGG - chr4.1:4097351-4097370 MS.gene048973:intron 45.0%
GAGAGGAAGATTAGTGGTTG+TGG + chr4.1:4095615-4095634 None:intergenic 45.0%
GAGATTCTCCAGCAAGAAGA+AGG - chr4.1:4097321-4097340 MS.gene048973:intron 45.0%
GAGGTTGTCAGTAAGGAGAA+GGG + chr4.1:4095637-4095656 None:intergenic 45.0%
GAGTAGAAGGTCCGATATAG+TGG - chr4.1:4097424-4097443 MS.gene048973:CDS 45.0%
GATTTGGATCCAAAACCGCT+TGG + chr4.1:4092402-4092421 None:intergenic 45.0%
GCGGCATATATGAGCCAAAT+AGG + chr4.1:4093336-4093355 None:intergenic 45.0%
GCGTAGTGTAGTGTAGTGTT+TGG + chr4.1:4094419-4094438 None:intergenic 45.0%
GGAAGGAAGAGTGGTGATAA+GGG + chr4.1:4095727-4095746 None:intergenic 45.0%
GGATCCCAATTTGGAAGTTG+AGG + chr4.1:4098248-4098267 None:intergenic 45.0%
GTGAAGGCTTTCTTACAGGT+TGG - chr4.1:4094985-4095004 MS.gene048973:intron 45.0%
TACGTAGAACATGCACAAGG+TGG + chr4.1:4097546-4097565 None:intergenic 45.0%
TAGTGGTTGTGGGAGAAGAA+GGG + chr4.1:4095604-4095623 None:intergenic 45.0%
TGACGTACCACCTGTTATGA+TGG + chr4.1:4092475-4092494 None:intergenic 45.0%
TGGAAGGAAGAGTGGTGATA+AGG + chr4.1:4095728-4095747 None:intergenic 45.0%
TTAGTGGTTGTGGGAGAAGA+AGG + chr4.1:4095605-4095624 None:intergenic 45.0%
TTCTCCAGCAAGAAGAAGGT+TGG - chr4.1:4097325-4097344 MS.gene048973:intron 45.0%
TTGAAACGGCAAAGGAGACA+GGG - chr4.1:4093246-4093265 MS.gene048973:intron 45.0%
TTTGCGGCAGCCTCAAAATA+TGG + chr4.1:4096365-4096384 None:intergenic 45.0%
! AAGTCTGGCTCAGTTCAAGT+CGG + chr4.1:4095830-4095849 None:intergenic 45.0%
! CAAACTGACTCAGGTATTCC+GGG - chr4.1:4093578-4093597 MS.gene048973:intron 45.0%
! CCAAACTGACTCAGGTATTC+CGG - chr4.1:4093577-4093596 MS.gene048973:intron 45.0%
! CGATTTGGAACTGCAAGGAT+GGG - chr4.1:4095803-4095822 MS.gene048973:intron 45.0%
! CTTGATGTTGGATTCGGTTC+TGG - chr4.1:4095894-4095913 MS.gene048973:intron 45.0%
! GGGAATGGTCTTTAAGAGCT+TGG + chr4.1:4095146-4095165 None:intergenic 45.0%
! TGAAGGTTGAGGTTTGGTAC+TGG - chr4.1:4096176-4096195 MS.gene048973:CDS 45.0%
!! AGAATCCTTAAAGAGTGCCC+CGG - chr4.1:4094193-4094212 MS.gene048973:intron 45.0%
!! AGGCTTTCTTACAGGTTGGT+AGG - chr4.1:4094989-4095008 MS.gene048973:intron 45.0%
!! GCAATACACGGTTGGTTTAC+TGG - chr4.1:4093299-4093318 MS.gene048973:intron 45.0%
!! TCGATTTGGAACTGCAAGGA+TGG - chr4.1:4095802-4095821 MS.gene048973:intron 45.0%
!! TTATGATGGCGGTGATGGAA+CGG + chr4.1:4092461-4092480 None:intergenic 45.0%
!! AATTTAATTAATTAATATTG+TGG - chr4.1:4093179-4093198 MS.gene048973:intron 5.0%
!! TTTATCAATTTAATATATTA+AGG + chr4.1:4094005-4094024 None:intergenic 5.0%
AACGCAGTTCACAGTCACGT+TGG + chr4.1:4094928-4094947 None:intergenic 50.0%
AACGTGTCGTCCGCAATACA+CGG - chr4.1:4093287-4093306 MS.gene048973:intron 50.0%
AAGAAAGCCTTCACGCTCTC+TGG + chr4.1:4094979-4094998 None:intergenic 50.0%
AAGAGTGGTGATAAGGGTGG+AGG + chr4.1:4095721-4095740 None:intergenic 50.0%
AAGGGTGGAGGTTGTCAGTA+AGG + chr4.1:4095644-4095663 None:intergenic 50.0%
ACAGGTGGTACGTCAGGAAT+CGG - chr4.1:4092480-4092499 MS.gene048973:CDS 50.0%
ACGGATCAGATGACGATGGA+AGG + chr4.1:4095744-4095763 None:intergenic 50.0%
ACTGTGAACTGCGTTCATCC+GGG - chr4.1:4094933-4094952 MS.gene048973:intron 50.0%
AGATTATACTCCCTCCGTCC+CGG + chr4.1:4093599-4093618 None:intergenic 50.0%
AGGAAGAGTGGTGATAAGGG+TGG + chr4.1:4095724-4095743 None:intergenic 50.0%
AGGAGACAGGGATACAAGGA+AGG - chr4.1:4093258-4093277 MS.gene048973:intron 50.0%
AGGTTGGAGAGAGAAAGTGG+AGG - chr4.1:4097341-4097360 MS.gene048973:intron 50.0%
AGTGTGGTGGTTGGAGTGAA+TGG + chr4.1:4096856-4096875 None:intergenic 50.0%
ATCACCGCCATCATAACAGG+TGG - chr4.1:4092465-4092484 MS.gene048973:CDS 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr4.1:4093390-4093409 None:intergenic 50.0%
CACGTGGCACCAAACATAAG+GGG - chr4.1:4096483-4096502 MS.gene048973:intron 50.0%
CACGTGGCACCAAACATAAG+GGG + chr4.1:4096502-4096483 None:intergenic 50.0%
CATCAAGAAGGTGAGCAAGG+CGG + chr4.1:4095881-4095900 None:intergenic 50.0%
CCACGTGGCACCAAACATAA+GGG - chr4.1:4096482-4096501 MS.gene048973:intron 50.0%
CCACGTGGCACCAAACATAA+GGG + chr4.1:4096501-4096482 None:intergenic 50.0%
CCGGAATACCTGAGTCAGTT+TGG + chr4.1:4093580-4093599 None:intergenic 50.0%
CGTACCACCTGTTATGATGG+CGG + chr4.1:4092472-4092491 None:intergenic 50.0%
CTAGCTGAACACTCGTCTCT+GGG - chr4.1:4093673-4093692 MS.gene048973:intron 50.0%
CTCTCCAACCTTCTTCTTGC+TGG + chr4.1:4097332-4097351 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+GGG - chr4.1:4094067-4094086 MS.gene048973:intron 50.0%
GAACAAGTCACCGAAACCTG+CGG - chr4.1:4092429-4092448 MS.gene048973:CDS 50.0%
GACTGTGAACTGCGTTCATC+CGG - chr4.1:4094932-4094951 MS.gene048973:intron 50.0%
GAGATTGAGAGGGAAACCGA+TGG + chr4.1:4092691-4092710 None:intergenic 50.0%
GAGCGTGAAGGCTTTCTTAC+AGG - chr4.1:4094981-4095000 MS.gene048973:intron 50.0%
GAGGAGAAGGGAGAGGAAAA+AGG + chr4.1:4095690-4095709 None:intergenic 50.0%
GATGACGATGGAAGGAAGAG+TGG + chr4.1:4095736-4095755 None:intergenic 50.0%
GCAAAGGAGACAGGGATACA+AGG - chr4.1:4093254-4093273 MS.gene048973:intron 50.0%
GCACAAGGTGGCGTTTAGTT+TGG + chr4.1:4097534-4097553 None:intergenic 50.0%
GCACCAAACATAAGGGGTCT+GGG - chr4.1:4096489-4096508 MS.gene048973:intron 50.0%
GCACCAAACATAAGGGGTCT+GGG + chr4.1:4096508-4096489 None:intergenic 50.0%
GCGTAGCATGAAAAATGCGG+AGG - chr4.1:4092557-4092576 MS.gene048973:intron 50.0%
GCTCTTAAAGACCATTCCCC+AGG - chr4.1:4095147-4095166 MS.gene048973:intron 50.0%
GGAAATGTTAACCAGTGCCC+CGG - chr4.1:4094066-4094085 MS.gene048973:intron 50.0%
GGAGAAGGGAGAGGAAAAAG+GGG + chr4.1:4095688-4095707 None:intergenic 50.0%
GGAGGTTGTCAGTAAGGAGA+AGG + chr4.1:4095638-4095657 None:intergenic 50.0%
GGCGCGTAGCATGAAAAATG+CGG - chr4.1:4092554-4092573 MS.gene048973:intron 50.0%
GTGGAAAACGTTGGCGAGTT+TGG + chr4.1:4094540-4094559 None:intergenic 50.0%
GTTATGTGGCAACTCACCCA+AGG - chr4.1:4098179-4098198 MS.gene048973:CDS 50.0%
GTTGAAACGGCAAAGGAGAC+AGG - chr4.1:4093245-4093264 MS.gene048973:intron 50.0%
TAAAGGCCTTAACCAGTGCC+CGG + chr4.1:4094088-4094107 None:intergenic 50.0%
TAGCTGAACACTCGTCTCTG+GGG - chr4.1:4093674-4093693 MS.gene048973:intron 50.0%
TCCACGTGGCACCAAACATA+AGG - chr4.1:4096481-4096500 MS.gene048973:intron 50.0%
TCCACGTGGCACCAAACATA+AGG + chr4.1:4096500-4096481 None:intergenic 50.0%
TCCATCACCGCCATCATAAC+AGG - chr4.1:4092462-4092481 MS.gene048973:CDS 50.0%
TGCGAGAAAGCTCGTTAGTG+TGG + chr4.1:4094559-4094578 None:intergenic 50.0%
TGGCGACGTCATCTCCTATT+TGG - chr4.1:4093319-4093338 MS.gene048973:intron 50.0%
TGGTGGTTGGAGTGAATGGA+GGG + chr4.1:4096852-4096871 None:intergenic 50.0%
TGTCAGTAAGGAGAAGGGAG+AGG + chr4.1:4095632-4095651 None:intergenic 50.0%
TTGGAGAGAGAAAGTGGAGG+AGG - chr4.1:4097344-4097363 MS.gene048973:intron 50.0%
! AGAAGAGCACGCAATCTCTG+AGG - chr4.1:4093059-4093078 MS.gene048973:intron 50.0%
! GCAGTCAGCAAAGTACTTGC+CGG + chr4.1:4098218-4098237 None:intergenic 50.0%
! GCATTTTTCATGCTACGCGC+CGG + chr4.1:4092555-4092574 None:intergenic 50.0%
! GGAAAGAGCATAAGCACGTG+TGG + chr4.1:4094519-4094538 None:intergenic 50.0%
! GTGGAGGAGGAAAAGGGTTT+TGG - chr4.1:4097357-4097376 MS.gene048973:intron 50.0%
!! AATCCTTAAAGAGTGCCCCG+GGG - chr4.1:4094195-4094214 MS.gene048973:intron 50.0%
!! ACCTGTTATGATGGCGGTGA+TGG + chr4.1:4092466-4092485 None:intergenic 50.0%
!! CCCCTGGTCCATTTTTGACT+TGG - chr4.1:4095435-4095454 MS.gene048973:intron 50.0%
!! CCCCTGGTCCATTTTTGACT+TGG + chr4.1:4095454-4095435 None:intergenic 50.0%
!! GAATCCTTAAAGAGTGCCCC+GGG - chr4.1:4094194-4094213 MS.gene048973:intron 50.0%
!! GAGCACCGAGTTTGTGATGA+AGG - chr4.1:4096159-4096178 MS.gene048973:CDS 50.0%
!! GCAGGTTTCGGTGACTTGTT+CGG + chr4.1:4092430-4092449 None:intergenic 50.0%
!! TGACTTGGTCGTTGATGACG+TGG - chr4.1:4095450-4095469 MS.gene048973:intron 50.0%
!! TGACTTGGTCGTTGATGACG+TGG + chr4.1:4095469-4095450 None:intergenic 50.0%
AAAGGCCTTAACCAGTGCCC+GGG + chr4.1:4094087-4094106 None:intergenic 55.0%
AGGGGTAGCAACGACGATGA+CGG + chr4.1:4095670-4095689 None:intergenic 55.0%
AGTGAATGGAGGGGTGATGC+TGG + chr4.1:4096842-4096861 None:intergenic 55.0%
AGTGGTGATAAGGGTGGAGG+TGG + chr4.1:4095718-4095737 None:intergenic 55.0%
CAAGGCGGAATCGAAGTGGA+GGG + chr4.1:4095866-4095885 None:intergenic 55.0%
CCAAGGCTCGTCAATGTGTC+CGG - chr4.1:4098196-4098215 MS.gene048973:CDS 55.0%
CGAGCTTTCTCGCAGACTCA+AGG - chr4.1:4094565-4094584 MS.gene048973:intron 55.0%
CGGACACATTGACGAGCCTT+GGG + chr4.1:4098198-4098217 None:intergenic 55.0%
CTGACTCAGGTATTCCGGGA+CGG - chr4.1:4093582-4093601 MS.gene048973:intron 55.0%
CTGTGAACTGCGTTCATCCG+GGG - chr4.1:4094934-4094953 MS.gene048973:intron 55.0%
GCACCCAGACCCCTTATGTT+TGG - chr4.1:4095472-4095491 MS.gene048973:intron 55.0%
GCACCCAGACCCCTTATGTT+TGG + chr4.1:4095491-4095472 None:intergenic 55.0%
GCTAGCTGAACACTCGTCTC+TGG - chr4.1:4093672-4093691 MS.gene048973:intron 55.0%
GGCACCAAACATAAGGGGTC+TGG - chr4.1:4096488-4096507 MS.gene048973:intron 55.0%
GGCACCAAACATAAGGGGTC+TGG + chr4.1:4096507-4096488 None:intergenic 55.0%
GGTGGTTGGAGTGAATGGAG+GGG + chr4.1:4096851-4096870 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr4.1:4093386-4093405 None:intergenic 55.0%
GTCAGGAATCGGAGCGGAAA+CGG - chr4.1:4092491-4092510 MS.gene048973:CDS 55.0%
GTGATAAGGGTGGAGGTGGT+CGG + chr4.1:4095714-4095733 None:intergenic 55.0%
GTGGAGGCTTATTACGGCGA+CGG + chr4.1:4095763-4095782 None:intergenic 55.0%
GTGGTGGTTGGAGTGAATGG+AGG + chr4.1:4096853-4096872 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + chr4.1:4094214-4094233 None:intergenic 55.0%
TGAGCAAGGCGGAATCGAAG+TGG + chr4.1:4095870-4095889 None:intergenic 55.0%
TGGTACGTCAGGAATCGGAG+CGG - chr4.1:4092485-4092504 MS.gene048973:CDS 55.0%
TGTCGTCCGCAATACACGGT+TGG - chr4.1:4093291-4093310 MS.gene048973:intron 55.0%
TGTGAACTGCGTTCATCCGG+GGG - chr4.1:4094935-4094954 MS.gene048973:intron 55.0%
TTCACGCTCTCTGGTGAGTC+TGG + chr4.1:4094970-4094989 None:intergenic 55.0%
! ACTCGTCTCTGGGGATTGGT+TGG - chr4.1:4093683-4093702 MS.gene048973:intron 55.0%
! AGACTCACCAGAGAGCGTGA+AGG - chr4.1:4094969-4094988 MS.gene048973:intron 55.0%
! AGGGGCGAGGGTGATTTTAC+CGG - chr4.1:4092533-4092552 MS.gene048973:CDS 55.0%
! AGTGACGGAGTGTCCTGAAG+CGG - chr4.1:4092596-4092615 MS.gene048973:intron 55.0%
! GAACACTCGTCTCTGGGGAT+TGG - chr4.1:4093679-4093698 MS.gene048973:intron 55.0%
! GACTTGTTCGGCGGTGGATT+TGG + chr4.1:4092418-4092437 None:intergenic 55.0%
! GAGCACGCAATCTCTGAGGA+TGG - chr4.1:4093063-4093082 MS.gene048973:intron 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + chr4.1:4094215-4094234 None:intergenic 55.0%
!! ATCCTTAAAGAGTGCCCCGG+GGG - chr4.1:4094196-4094215 MS.gene048973:intron 55.0%
!! CCCTTATGTTTGGTGCCACG+TGG - chr4.1:4095482-4095501 MS.gene048973:intron 55.0%
!! CCCTTATGTTTGGTGCCACG+TGG + chr4.1:4095501-4095482 None:intergenic 55.0%
!! GGTTTCGGTGACTTGTTCGG+CGG + chr4.1:4092427-4092446 None:intergenic 55.0%
AACTACCACTCCCTCCGTCC+CGG - chr4.1:4093373-4093392 MS.gene048973:intron 60.0%
AAGGCCTTAACCAGTGCCCG+GGG + chr4.1:4094086-4094105 None:intergenic 60.0%
ACGGAGATCGCCGCAGGTTT+CGG + chr4.1:4092442-4092461 None:intergenic 60.0%
ACGTGTGGCGTCGTACTCAC+TGG + chr4.1:4094504-4094523 None:intergenic 60.0%
ACTCAGGTATTCCGGGACGG+AGG - chr4.1:4093585-4093604 MS.gene048973:intron 60.0%
ATATTCCGGGACGGAGGGAG+TGG + chr4.1:4093381-4093400 None:intergenic 60.0%
CCGGACACATTGACGAGCCT+TGG + chr4.1:4098199-4098218 None:intergenic 60.0%
CGTGTGGCGTCGTACTCACT+GGG + chr4.1:4094503-4094522 None:intergenic 60.0%
CTCAGGTATTCCGGGACGGA+GGG - chr4.1:4093586-4093605 MS.gene048973:intron 60.0%
CTTGTTAACGAGTGCCCCCG+GGG + chr4.1:4094213-4094232 None:intergenic 60.0%
GAGGTGGTCGGTGAGGAGAA+GGG + chr4.1:4095702-4095721 None:intergenic 60.0%
GCAAGGCGGAATCGAAGTGG+AGG + chr4.1:4095867-4095886 None:intergenic 60.0%
GGCGACGGATCAGATGACGA+TGG + chr4.1:4095748-4095767 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr4.1:4093387-4093406 None:intergenic 60.0%
GTGTGGCGTCGTACTCACTG+GGG + chr4.1:4094502-4094521 None:intergenic 60.0%
! ATCGGATCGGCTGGTCCAAG+CGG - chr4.1:4092384-4092403 MS.gene048973:CDS 60.0%
! CAACGACGATGACGGCGGAA+GGG + chr4.1:4095662-4095681 None:intergenic 60.0%
! CGCGTGTGTTGGCGAAGAGA+GGG - chr4.1:4092514-4092533 MS.gene048973:CDS 60.0%
! GCGTGTGTTGGCGAAGAGAG+GGG - chr4.1:4092515-4092534 MS.gene048973:CDS 60.0%
! GGTAGCAACGACGATGACGG+CGG + chr4.1:4095667-4095686 None:intergenic 60.0%
!! AGTCTGGTTCTCACGACCCC+CGG + chr4.1:4094954-4094973 None:intergenic 60.0%
!! CTTTGGCAGTTTTGGCCCCC+TGG - chr4.1:4095419-4095438 MS.gene048973:intron 60.0%
!! CTTTGGCAGTTTTGGCCCCC+TGG + chr4.1:4095438-4095419 None:intergenic 60.0%
!! TCGGCTGGTCCAAGCGGTTT+TGG - chr4.1:4092390-4092409 MS.gene048973:CDS 60.0%
!! TTCGGTGACTTGTTCGGCGG+TGG + chr4.1:4092424-4092443 None:intergenic 60.0%
AAGGGTGGAGGTGGTCGGTG+AGG + chr4.1:4095709-4095728 None:intergenic 65.0%
AGCGGAAACGGCGCGTGTGT+TGG - chr4.1:4092503-4092522 MS.gene048973:CDS 65.0%
GATGGAACGGAGATCGCCGC+AGG + chr4.1:4092448-4092467 None:intergenic 65.0%
GGAGGTGGTCGGTGAGGAGA+AGG + chr4.1:4095703-4095722 None:intergenic 65.0%
GGTCGGTGAGGAGAAGGGAG+AGG + chr4.1:4095697-4095716 None:intergenic 65.0%
GTTGGCGAAGAGAGGGGCGA+GGG - chr4.1:4092521-4092540 MS.gene048973:CDS 65.0%
TGTTGGCGAAGAGAGGGGCG+AGG - chr4.1:4092520-4092539 MS.gene048973:CDS 65.0%
TTAACCAGTGCCCCGGGCAC+TGG - chr4.1:4094073-4094092 MS.gene048973:intron 65.0%
TTAACCAGTGCCCGGGGCAC+TGG + chr4.1:4094080-4094099 None:intergenic 65.0%
! GCAACGACGATGACGGCGGA+AGG + chr4.1:4095663-4095682 None:intergenic 65.0%
! GCGCGTGTGTTGGCGAAGAG+AGG - chr4.1:4092513-4092532 MS.gene048973:CDS 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG + chr4.1:4094201-4094220 None:intergenic 65.0%
!! AGTGCCCCGGGCACTGGTTA+AGG - chr4.1:4094079-4094098 MS.gene048973:intron 65.0%
! CGACGATGACGGCGGAAGGG+TGG + chr4.1:4095659-4095678 None:intergenic 70.0%
! CGATGACGGCGGAAGGGTGG+AGG + chr4.1:4095656-4095675 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 4092360 4098366 4092360 ID=MS.gene048973
chr4.1 mRNA 4092360 4098366 4092360 ID=MS.gene048973.t1;Parent=MS.gene048973
chr4.1 exon 4098011 4098366 4098011 ID=MS.gene048973.t1.exon1;Parent=MS.gene048973.t1
chr4.1 CDS 4098011 4098366 4098011 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4097609 4097688 4097609 ID=MS.gene048973.t1.exon2;Parent=MS.gene048973.t1
chr4.1 CDS 4097609 4097688 4097609 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4097363 4097519 4097363 ID=MS.gene048973.t1.exon3;Parent=MS.gene048973.t1
chr4.1 CDS 4097363 4097519 4097363 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4096140 4096221 4096140 ID=MS.gene048973.t1.exon4;Parent=MS.gene048973.t1
chr4.1 CDS 4096140 4096221 4096140 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4095724 4095811 4095724 ID=MS.gene048973.t1.exon5;Parent=MS.gene048973.t1
chr4.1 CDS 4095724 4095811 4095724 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4095558 4095604 4095558 ID=MS.gene048973.t1.exon6;Parent=MS.gene048973.t1
chr4.1 CDS 4095558 4095604 4095558 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
chr4.1 exon 4092360 4092563 4092360 ID=MS.gene048973.t1.exon7;Parent=MS.gene048973.t1
chr4.1 CDS 4092360 4092563 4092360 ID=cds.MS.gene048973.t1;Parent=MS.gene048973.t1
Gene Sequence

>MS.gene048973

ATGCTTGAAACGGTTAAATACATAATCGGATCGGCTGGTCCAAGCGGTTTTGGATCCAAATCCACCGCCGAACAAGTCACCGAAACCTGCGGCGATCTCCGTTCCATCACCGCCATCATAACAGGTGGTACGTCAGGAATCGGAGCGGAAACGGCGCGTGTGTTGGCGAAGAGAGGGGCGAGGGTGATTTTACCGGCGCGTAGCATGAAAAATGCGGAGGAAACAAGAGGAAGAATAGTGACGGAGTGTCCTGAAGCGGAGATTATAGTTATGGCACTTGATCTCAGTTCTCTCAATTCTGTTACCAACTTCGTTACTCGTTTTCACTCCATCGGTTTCCCTCTCAATCTCCTCATGTATGTATATGTATATACTCTCATTTCATGCAATTATGTTTTATCACATACACACATCGAACACAATATTAACATGTCGACAGTAATAATAATTTGATAAAAATAACATAATTCATTATAATTTCATGTGTTGGTGTCGGCGTCAGACATTAACACAAACATTAACACATGTACGTCTCTTCCATTAGAAGTGTCGAGATTTATTTATCATTTTTAATGATCTAATCTAATCTAATACAGTACATAAGTAGTACAGTATATATTTTTTTCGTTCTTTGACCATATTTATTTATTTGAATTTGAATGATTGGTTGTTGACTAGAAACAATGCTGGGAAGTTTGCAGAAGAGCACGCAATCTCTGAGGATGGAGTTGAAATGACCTTTGCCACTAATTATTTAGGTGAGTAAGATTACAACAAATTAATTTTTATATATTTTTGTTATTTGATGGGTATATATATAATTTAATTAATTAATATTGTGGTGCAGGTCATTTTCTGTTGACAAAAATGTTGATGAAGAAGATGGTTGAAACGGCAAAGGAGACAGGGATACAAGGAAGGATAGTGAACGTGTCGTCCGCAATACACGGTTGGTTTACTGGCGACGTCATCTCCTATTTGGCTCATATATGCCGCAACAAAAGGTGACAAATAACTACCACTCCCTCCGTCCCGGAATATCTGACCCATTTACTAAAAAAAAGTGTCCCAAAATAACTGAGTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACTCTAATTAATACTACTTTCATCATTCTCAATTCAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAACCAAACTGACTCAGGTATTCCGGGACGGAGGGAGTATAATCTTATCAATTTATTTGACTTATTCGTTATTACACCTTGAATGAAATTTTGGTTAAGCTAGCTGAACACTCGTCTCTGGGGATTGGTTGGATATGTATTCACATTGTTATAAAGAAGGTCATATCATATTTTTATATTAATTTATTTTAAAATTAGTTTTAATTTTGCCACAAGAGTATGTATATATACCCAACTATCTAAGAATTTACCTTTTGTCCAAAAAAAAAAATTACCTTTTGTTAACCTGCAATTTTGCCAAAACTTTGGGCCAGTAATACCATGTAACTCGGAAGAGATATGGTCTTTATACGTGAGGTGTTGTTACTATAGGCGTTAAATATATTAGAATTGCAAACATATCTCTAGTGTATTCTTTTGTTAGTAATCCTTAATATATTAAATTGATAAAAAAATATATTTGAGGATTAAATTGGCTATCATAAAACAAAGGGAAATGTTAACCAGTGCCCCGGGCACTGGTTAAGGCCTTTAAATGGTAACTTATCATGAAAATATGTGTAATCAATGCATCGGAAATCGAAATCCTTGACTTTTTTATAAAATTATTTCTTCTTTTAGAATCCTTAAAGAGTGCCCCGGGGGCACTCGTTAACAAGACCCTAAAACAAATTACGAGGACTACAATGACTAATAAAAATTACTACCATTTATGAATGTGTTTGTAGTTTCAATGCATTCAAGGATCAATGACATCTAGTTACACTTCCAAGTTTCGGAACAAAAATGTGATTTTCACGTAAACAAGCCGTACTTGAAATGAAAATGATGTGATATGTTTACCAAACACTACACTACACTACGCTACATTTGTGTTTCTGTTTACTAATTTGTTGGATTGAAATATGTTTGTGTTGTGTGATGTCCCCAGTGAGTACGACGCCACACGTGCTTATGCTCTTTCCAAACTCGCCAACGTTTTCCACACTAACGAGCTTTCTCGCAGACTCAAGGTAACATATAATTTCACTACACTATCTATTCATTCATCTTTTATGGAGTATTTTATTTAATTTAATTAACTAACATGCAATATCCATCTCGATCTCATCTACTATAGTATAGTAGTATCATCTACATATCATATCCTATCCATATTTAAAAAGTGAAATTTTTGTTTGCTATGTCAGTAATCAAATGCCCCACGACTTCATTTGCTATAATTTAACCCCTACCTGTTCTTGCTAATTATTTCTCCAGTTTATATAGTTTATTTTATTAATGAGCACGTATAAATAAATAAAATACTAGTAAATAATTTGGGGTATTAAATATGTGCAGGAAATGGATGCCAACGTGACTGTGAACTGCGTTCATCCGGGGGTCGTGAGAACCAGACTCACCAGAGAGCGTGAAGGCTTTCTTACAGGTTGGTAGGAACAATAACACTCTTGTTTTGGGTCAAAGTTTTGGTTCCTTTTTTATGTCTGCAGTGCAGCCGTTAATTGATTTCAGAATTTTCCTTTTCTATTCTAAAATCAAATGCAGATTTAGTTTTCTTCTTGGCTTCCAAGCTCTTAAAGACCATTCCCCAGGTAAATACAATACACTATAGTAGAACTTGTACTATAATATATATTCAATGTTCTCTATTTGTGCATGGGTAAAGTTTAATTTGGACCCATTGAAAAATTGGTCCAACTTGACCAATTAACTTAAACCATTGATCAAATAAGATGTATAGATTTTAGGCTTAATTGCACTTTTGGCCCCCTAACTTTTCAAAAGTTGCGGTTATGGTCCCCTAACTAATTTAAATACAAAACAGCCCCCTAAGTATTGATTCTTTGGCAGTTTTGGCCCCCTGGTCCATTTTTGACTTGGTCGTTGATGACGTGGCACCCAGACCCCTTATGTTTGGTGCCACGTGGATATTATTTATTTTTATTTTTTTTAAAAGCTTGCTGGCATTTTTAAATTGGGGAAGAAATTAAAAAAAAAAATTAGTTTCTTCTTCTTCTCACGTTCCCTTCTTCTCCCACAACCACTAATCTTCCTCTCCCTTCTCCTTACTGACAACCTCCACCCTTCCGCCGTCATCGTCGTTGCTACCCCTTTTTCCTCTCCCTTCTCCTCACCGACCACCTCCACCCTTATCACCACTCTTCCTTCCATCGTCATCTGATCCGTCGCCGTAATAAGCCTCCACCCTTATCACCTCTTTTTCTTCGATTTGGAACTGCAAGGATGGGTCCGACTTGAACTGAGCCAGACTTACTTGTTCTTTCTCCCTCCACTTCGATTCCGCCTTGCTCACCTTCTTGATGTTGGATTCGGTTCTGGACTCCGTTCTTTCTTCTTCCTTCACCGATTTGTCTTCATTTCTTTAATTTTCAAGGTTGTTTGATGTTGTATAGATCGGCTTATGAATCAATTACAACTTCCTCTCCTTTCTTCTCTTCTGTTAGATTCGGTTACAAGCTTGTGTTTGTGAGTTCATTTCTAGTGACTCGGTTTGTATTGAACAGATTGAAAACGTGTGTGTGTTATGAACAACTTTGTAATGTCAGATGTATGCTCATTGTGAGCACCGAGTTTGTGATGAAGGTTGAGGTTTGGTACTGGTTGTATTTGAATGTTCTTGCTGGAAGAATGTTCTTGAGAAATTGATGATAATTTTTTGGAGTGTAGATCTTTGGATTTGCTGATTTTGGTTTGTTCTTCTGTTTATGAGGTTTGAAGGTTCATGATGTTCTTGAGGTTTTTTGGAAGAAAAAGTGTTTTTGATCCATATTTTGAGGCTGCCGCAAATTCATGATGTCCTTTTTTAATTTTCCATTTTTTTTTTAATTTCTCCAATTTCAAAATGCCAGCAAGCTTTTAAAAAAAAATAAAAAATAAATAATATCCACGTGGCACCAAACATAAGGGGTCTGGGTGCCACGTCATCAACGACCAAGTCAAAAATGGACCAGGGGGCCAAAACTGCCAAAGAATCAATACTTAGGGGGCTGTTTTGTATTTAAATTAGTTAGGGGGCCATAACCGCAACTTTTGAAAAGATAGGGGGCCAAAAGTGCAATTAAGCCTAGATTTTATGGTAGTCTATCTGCACCATGAGTTGCTCTCTCACTCTTCCAGTATCTCTCTCTCCTTTGATACACCATCACCAACATTTTCTTTTCTTATTCTTGTGCTCATCTATTGAAATTTTTTTTGGACTTTACATTACCAAATTAACATCGATCCTCTATATGTTTACTCACCAGCATCACCCCTCCATTCACTCCAACCACCACACTGATAAGCATGTTTCATTCCAAAATACCAACAACCATAACTCACAAACAATTTGAAGAGATTGAAGACATAAATATTTTTTGCATTAATTTAATTTGATTGAGTGTTGTTTGTGTTCAATGGCCTAAGATTTCAACCCAAAAGTTAGCTTGTTCTGATAAATAAATAAATAAAACTGGTGTTTTCTCCAACAATTCTTACGGTGCCATTGGTTTTTTCTACATCCATGTTTATCATTTTTGTGTCCACTCTGTTTATTATTTTCAACTATCACTATCAGAACCAAAATCTCAAATTAAATCAAGCTTCAGTTGTGGTTTAATTTTATTTATTTGTACACATAATGATGGATAATACAAAATTTTAAAAGGGTAAATTGAGATCTGAAAAACAATGGATGGCATGAACTATGAATTTGTGTATAAGTGTAAGTAACATAAAGGATCAGAGATTCTCCAGCAAGAAGAAGGTTGGAGAGAGAAAGTGGAGGAGGAAAAGGGTTTTGGAGAGAGAAAGAGAAGAATGAGAAAGAATAAAAATAAATATTCATGAGTAGAAGGTCCGATATAGTGGAGCGAATACATGGTAAAATCTATAAGCTTGTGTAATTTAATGGTCAGAAATCTTGATCCAATATGGACCAATACATGTATGGGTCCAAACTAAACGCCACCTTGTGCATGTTCTACGTAAACTTTGCTAGCTTTTACACACTCACGTCTCATTTATAAAGTTTTTTCTAGGTTACCTCTAAAAAATTGTCGGTAATTTACCCATCAATTAATCAAAATTAACTACTGGATCAGGAAATTTGTATACAAAGTGGAAGAATTTTAATTAACTTTAATTGGTTGATAGATAAATTACCTACAATTCTTCAAAGCTAGCATAAGCCTCCCCTTCAAAACAATATTTGAACCATTCTCTTCTCGTAATAATAAAAAAAGTCACGCATTGAGATGTATTACTTCTTTATTTTATTTTTTACCCTTATTTTATGTTCAATAAAAATACATGTATCCCACATATAAGATATTCTTGAAAAGAGAGCAAAGTGTGAGAGGTATTGAATGAATAAAAGTGTATACTTTGAATTTGTGATGACAAATATATTTTATAGGCGTATAAGTAGAGTCGTTGAATGAGAGGTTGCTACAACATGCGAATACATTATTGGTTGTATGCATTTTTTATTTTTATTTTTGCATTAAAAGATTCTGTCCATTAATTTGTTGTTGTGTTTTTCTTTTGAGCTCTGATTTAATTACCGCAAATAAACTTATATACAGGCAGCTGCAACAACATGTTATGTGGCAACTCACCCAAGGCTCGTCAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAACCTCAACTTCCAAATTGGGATCCAACATAACTGAAGCTTCAAGGTTATGGGCCGTTTCCGAATTAATGATTTCTAAGGGTCCAAAAGCTGCCTTTGACCTAATTAATAACCTTGAATTTTGA
Protein sequence

>MS.gene048973.t1

MLETVKYIIGSAGPSGFGSKSTAEQVTETCGDLRSITAIITGGTSGIGAETARVLAKRGARVILPARSMKNAEETRGRIVTECPEAEIIVMALDLSSLNSVTNFVTRFHSIGFPLNLLINNAGKFAEEHAISEDGVEMTFATNYLGHFLLTKMLMKKMVETAKETGIQGRIVNVSSAIHGWFTGDVISYLAHICRNKSEYDATRAYALSKLANVFHTNELSRRLKEMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCYVATHPRLVNVSGKYFADCNETSTSKLGSNITEASRLWAVSELMISKGPKAAFDLINNLEF