Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006262.t1 | RHN81782.1 | 98.4 | 315 | 5 | 0 | 1 | 315 | 42 | 356 | 7.80E-173 | 616.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006262.t1 | Q6RVV4 | 93.4 | 316 | 20 | 1 | 1 | 315 | 1 | 316 | 4.7e-166 | 585.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006262.t1 | A0A072W040 | 98.4 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 5.7e-173 | 616.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006262.t1 | MTR_1g100305 | 98.413 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 0.0 | 643 |
| MS.gene006262.t1 | MTR_1g100315 | 82.857 | 315 | 54 | 0 | 1 | 315 | 1 | 315 | 0.0 | 557 |
| MS.gene006262.t1 | MTR_1g100395 | 80.000 | 315 | 63 | 0 | 1 | 315 | 1 | 315 | 0.0 | 531 |
| MS.gene006262.t1 | MTR_1g100335 | 80.000 | 315 | 63 | 0 | 1 | 315 | 1 | 315 | 0.0 | 530 |
| MS.gene006262.t1 | MTR_8g098415 | 69.206 | 315 | 97 | 0 | 1 | 315 | 1 | 315 | 3.92e-165 | 462 |
| MS.gene006262.t1 | MTR_8g098415 | 70.130 | 308 | 92 | 0 | 1 | 308 | 1 | 308 | 1.65e-163 | 457 |
| MS.gene006262.t1 | MTR_6g053550 | 68.730 | 307 | 93 | 1 | 10 | 313 | 18 | 324 | 3.51e-155 | 437 |
| MS.gene006262.t1 | MTR_1g100335 | 80.488 | 246 | 48 | 0 | 1 | 246 | 1 | 246 | 2.47e-147 | 415 |
| MS.gene006262.t1 | MTR_1g100335 | 80.488 | 246 | 48 | 0 | 1 | 246 | 1 | 246 | 4.04e-147 | 414 |
| MS.gene006262.t1 | MTR_8g098415 | 68.605 | 258 | 81 | 0 | 58 | 315 | 1 | 258 | 1.20e-133 | 380 |
| MS.gene006262.t1 | MTR_1g068970 | 58.361 | 305 | 127 | 0 | 8 | 312 | 13 | 317 | 3.16e-130 | 374 |
| MS.gene006262.t1 | MTR_6g053600 | 69.084 | 262 | 78 | 1 | 10 | 268 | 4 | 265 | 1.48e-129 | 371 |
| MS.gene006262.t1 | MTR_7g099850 | 58.497 | 306 | 126 | 1 | 8 | 312 | 13 | 318 | 6.97e-129 | 370 |
| MS.gene006262.t1 | MTR_8g098415 | 72.603 | 219 | 60 | 0 | 1 | 219 | 1 | 219 | 3.08e-116 | 334 |
| MS.gene006262.t1 | MTR_1g068970 | 56.000 | 250 | 110 | 0 | 63 | 312 | 1 | 250 | 1.10e-101 | 299 |
| MS.gene006262.t1 | MTR_3g077410 | 44.231 | 312 | 170 | 2 | 8 | 315 | 13 | 324 | 5.93e-90 | 271 |
| MS.gene006262.t1 | MTR_4g105310 | 43.590 | 312 | 172 | 2 | 8 | 315 | 24 | 335 | 4.62e-83 | 254 |
| MS.gene006262.t1 | MTR_8g099995 | 43.607 | 305 | 168 | 3 | 8 | 308 | 13 | 317 | 1.89e-81 | 250 |
| MS.gene006262.t1 | MTR_4g105310 | 45.679 | 243 | 128 | 2 | 8 | 246 | 24 | 266 | 2.66e-65 | 206 |
| MS.gene006262.t1 | MTR_1g100345 | 77.027 | 74 | 17 | 0 | 33 | 106 | 4 | 77 | 2.44e-32 | 115 |
| MS.gene006262.t1 | MTR_6g081020 | 35.938 | 256 | 146 | 8 | 30 | 275 | 62 | 309 | 8.20e-28 | 111 |
| MS.gene006262.t1 | MTR_6g041980 | 27.863 | 262 | 175 | 6 | 25 | 285 | 62 | 310 | 2.76e-20 | 90.1 |
| MS.gene006262.t1 | MTR_2g079710 | 29.073 | 313 | 187 | 10 | 31 | 312 | 88 | 396 | 4.60e-20 | 90.1 |
| MS.gene006262.t1 | MTR_3g091070 | 28.852 | 305 | 163 | 12 | 32 | 312 | 43 | 317 | 7.34e-19 | 85.9 |
| MS.gene006262.t1 | MTR_6g453040 | 30.392 | 306 | 175 | 12 | 32 | 312 | 43 | 335 | 4.81e-18 | 84.0 |
| MS.gene006262.t1 | MTR_3g009190 | 29.836 | 305 | 178 | 10 | 32 | 312 | 65 | 357 | 5.06e-18 | 84.0 |
| MS.gene006262.t1 | MTR_3g009190 | 29.836 | 305 | 178 | 10 | 32 | 312 | 83 | 375 | 6.26e-18 | 84.0 |
| MS.gene006262.t1 | MTR_6g041980 | 27.619 | 210 | 143 | 3 | 4 | 213 | 43 | 243 | 8.31e-16 | 76.3 |
| MS.gene006262.t1 | MTR_3g009190 | 29.236 | 301 | 183 | 9 | 33 | 312 | 65 | 356 | 1.01e-15 | 77.4 |
| MS.gene006262.t1 | MTR_8g022500 | 38.053 | 113 | 45 | 2 | 34 | 146 | 431 | 518 | 1.08e-13 | 71.6 |
| MS.gene006262.t1 | MTR_3g098470 | 27.740 | 292 | 150 | 12 | 32 | 285 | 37 | 305 | 7.85e-12 | 65.5 |
| MS.gene006262.t1 | MTR_6g453040 | 32.367 | 207 | 111 | 7 | 32 | 220 | 65 | 260 | 3.90e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006262.t1 | AT4G23430 | 70.833 | 312 | 90 | 1 | 1 | 311 | 1 | 312 | 6.03e-166 | 464 |
| MS.gene006262.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 8.50e-166 | 464 |
| MS.gene006262.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 8.50e-166 | 464 |
| MS.gene006262.t1 | AT4G23430 | 70.513 | 312 | 89 | 2 | 1 | 311 | 1 | 310 | 3.63e-163 | 457 |
| MS.gene006262.t1 | AT4G23420 | 70.323 | 310 | 91 | 1 | 3 | 311 | 20 | 329 | 5.27e-162 | 455 |
| MS.gene006262.t1 | AT4G11410 | 67.937 | 315 | 101 | 0 | 1 | 315 | 1 | 315 | 1.93e-160 | 450 |
| MS.gene006262.t1 | AT4G23430 | 68.269 | 312 | 88 | 2 | 1 | 311 | 1 | 302 | 3.70e-156 | 439 |
| MS.gene006262.t1 | AT4G23430 | 67.949 | 312 | 87 | 3 | 1 | 311 | 1 | 300 | 1.73e-153 | 432 |
| MS.gene006262.t1 | AT4G23420 | 71.374 | 262 | 74 | 1 | 1 | 261 | 1 | 262 | 1.88e-137 | 390 |
| MS.gene006262.t1 | AT4G23420 | 75.630 | 238 | 58 | 0 | 1 | 238 | 1 | 238 | 5.99e-134 | 381 |
| MS.gene006262.t1 | AT4G11410 | 71.429 | 245 | 70 | 0 | 1 | 245 | 1 | 245 | 3.31e-127 | 364 |
| MS.gene006262.t1 | AT5G02540 | 59.283 | 307 | 125 | 0 | 6 | 312 | 10 | 316 | 7.04e-125 | 360 |
| MS.gene006262.t1 | AT2G37540 | 55.700 | 307 | 136 | 0 | 6 | 312 | 10 | 316 | 9.14e-124 | 357 |
| MS.gene006262.t1 | AT2G37540 | 58.898 | 236 | 97 | 0 | 6 | 241 | 10 | 245 | 2.99e-99 | 293 |
| MS.gene006262.t1 | AT4G24050 | 44.231 | 312 | 167 | 4 | 8 | 314 | 13 | 322 | 1.87e-83 | 255 |
| MS.gene006262.t1 | AT5G50130 | 45.307 | 309 | 165 | 3 | 8 | 312 | 13 | 321 | 5.16e-83 | 254 |
| MS.gene006262.t1 | AT5G50130 | 44.484 | 281 | 155 | 1 | 33 | 312 | 7 | 287 | 1.51e-76 | 236 |
| MS.gene006262.t1 | AT5G50130 | 44.681 | 282 | 154 | 2 | 33 | 312 | 7 | 288 | 7.12e-76 | 235 |
| MS.gene006262.t1 | AT1G64590 | 43.813 | 299 | 165 | 2 | 17 | 312 | 22 | 320 | 2.42e-71 | 224 |
| MS.gene006262.t1 | AT5G50130 | 44.528 | 265 | 143 | 2 | 8 | 268 | 13 | 277 | 2.38e-69 | 219 |
| MS.gene006262.t1 | AT5G50130 | 44.737 | 266 | 142 | 3 | 8 | 268 | 13 | 278 | 1.08e-68 | 217 |
| MS.gene006262.t1 | AT5G50130 | 47.863 | 234 | 120 | 1 | 8 | 239 | 13 | 246 | 6.17e-68 | 213 |
| MS.gene006262.t1 | AT5G50130 | 48.085 | 235 | 119 | 2 | 8 | 239 | 13 | 247 | 3.06e-67 | 211 |
| MS.gene006262.t1 | AT4G24050 | 42.424 | 264 | 147 | 3 | 8 | 268 | 13 | 274 | 1.34e-66 | 210 |
| MS.gene006262.t1 | AT5G50130 | 43.882 | 237 | 131 | 1 | 34 | 268 | 8 | 244 | 3.63e-62 | 199 |
| MS.gene006262.t1 | AT5G50130 | 44.118 | 238 | 130 | 2 | 34 | 268 | 8 | 245 | 1.38e-61 | 198 |
| MS.gene006262.t1 | AT4G27760 | 30.719 | 306 | 177 | 9 | 30 | 312 | 58 | 351 | 2.39e-30 | 118 |
| MS.gene006262.t1 | AT5G53090 | 31.894 | 301 | 180 | 8 | 30 | 312 | 57 | 350 | 2.69e-28 | 112 |
| MS.gene006262.t1 | AT5G53100 | 31.148 | 305 | 180 | 9 | 30 | 312 | 45 | 341 | 4.33e-27 | 109 |
| MS.gene006262.t1 | AT5G54190 | 28.296 | 311 | 188 | 10 | 33 | 312 | 96 | 402 | 1.54e-24 | 102 |
| MS.gene006262.t1 | AT1G03630 | 31.090 | 312 | 181 | 12 | 31 | 312 | 89 | 396 | 2.30e-24 | 102 |
| MS.gene006262.t1 | AT1G03630 | 31.090 | 312 | 181 | 12 | 31 | 312 | 91 | 398 | 2.40e-24 | 102 |
| MS.gene006262.t1 | AT5G04070 | 28.956 | 297 | 181 | 9 | 32 | 308 | 61 | 347 | 1.57e-23 | 99.4 |
| MS.gene006262.t1 | AT4G09750 | 28.014 | 282 | 189 | 6 | 4 | 285 | 20 | 287 | 2.71e-22 | 95.5 |
| MS.gene006262.t1 | AT4G27440 | 29.260 | 311 | 185 | 10 | 33 | 312 | 92 | 398 | 1.12e-21 | 94.7 |
| MS.gene006262.t1 | AT4G27440 | 29.260 | 311 | 185 | 10 | 33 | 312 | 92 | 398 | 1.12e-21 | 94.7 |
| MS.gene006262.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 63 | 354 | 3.85e-19 | 87.0 |
| MS.gene006262.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 63 | 354 | 3.85e-19 | 87.0 |
| MS.gene006262.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 62 | 353 | 4.01e-19 | 87.0 |
| MS.gene006262.t1 | AT5G54190 | 25.614 | 285 | 178 | 9 | 58 | 312 | 1 | 281 | 3.51e-17 | 80.5 |
| MS.gene006262.t1 | AT5G15940 | 27.477 | 222 | 144 | 5 | 32 | 240 | 63 | 280 | 2.82e-15 | 75.5 |
| MS.gene006262.t1 | AT5G61830 | 26.482 | 253 | 143 | 9 | 32 | 269 | 39 | 263 | 3.71e-11 | 63.5 |
| MS.gene006262.t1 | AT5G61830 | 26.482 | 253 | 143 | 9 | 32 | 269 | 39 | 263 | 3.71e-11 | 63.5 |
Find 71 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCGGTGTTCATGTGATTA+TGG | 0.226178 | 1.1:-72076591 | MS.gene006262:CDS |
| TTCAGCAAGAAAGGTGTTTC+TGG | 0.229466 | 1.1:-72077828 | MS.gene006262:CDS |
| GGTCTCACTGCCATTGTTAC+TGG | 0.236378 | 1.1:-72077753 | MS.gene006262:intron |
| CTGCAGTTCAATGTTGTCTT+TGG | 0.239372 | 1.1:+72076162 | None:intergenic |
| AAGAAATAATGCAGGAATTA+TGG | 0.267594 | 1.1:-72076203 | MS.gene006262:CDS |
| CGCGGTGTTCATGTGATTAT+GGG | 0.273076 | 1.1:-72076590 | MS.gene006262:CDS |
| CTGGGATTTCAGCATCAATT+TGG | 0.274620 | 1.1:-72073692 | MS.gene006262:CDS |
| GCATCTGAGTATAATTCTTC+TGG | 0.288049 | 1.1:-72076449 | MS.gene006262:CDS |
| ACATGGAAGGGACGCTGATT+TGG | 0.331121 | 1.1:-72073725 | MS.gene006262:CDS |
| CACTAACTCCCTTCACTTGT+GGG | 0.347652 | 1.1:+72073788 | None:intergenic |
| GGAGTTAGATCTTAGCTCAT+TGG | 0.400097 | 1.1:-72076489 | MS.gene006262:CDS |
| CCACTAACTCCCTTCACTTG+TGG | 0.412556 | 1.1:+72073787 | None:intergenic |
| CTGATTTGGCAAAGAAACTC+TGG | 0.413553 | 1.1:-72073711 | MS.gene006262:CDS |
| TTACCACATACCTATGTGAT+TGG | 0.416556 | 1.1:+72076132 | None:intergenic |
| AGATTGGTAACAATTGTTCC+TGG | 0.426628 | 1.1:+72074822 | None:intergenic |
| TACAGCAGATGGGGTGCATA+TGG | 0.428773 | 1.1:-72075660 | MS.gene006262:CDS |
| CTCCATCATGATCAGGAAGA+TGG | 0.437998 | 1.1:-72074873 | MS.gene006262:intron |
| CCACAAGTGAAGGGAGTTAG+TGG | 0.447541 | 1.1:-72073787 | MS.gene006262:CDS |
| ACAGGAGCATCCAGCGGCAT+TGG | 0.459677 | 1.1:-72076641 | MS.gene006262:intron |
| GAAACACCTTTCTTGCTGAA+TGG | 0.471111 | 1.1:+72077831 | None:intergenic |
| AGTCTCAGCGCCAATGCCGC+TGG | 0.474761 | 1.1:+72076631 | None:intergenic |
| CTTTGTACAGTTACAGCAGA+TGG | 0.480627 | 1.1:-72075671 | MS.gene006262:intron |
| CCTTGAGATGCTTTGTAAGT+TGG | 0.481616 | 1.1:+72075604 | None:intergenic |
| CTCTGCTAAACTTGATGCCA+TGG | 0.490137 | 1.1:-72076510 | MS.gene006262:CDS |
| ATAAAATCAATGACGAATCA+AGG | 0.490214 | 1.1:-72075771 | MS.gene006262:intron |
| CAGGTCTAATAAATGTGGTT+GGG | 0.491530 | 1.1:-72074322 | MS.gene006262:CDS |
| ACTGTTATGTCGGAAAAGAT+TGG | 0.497151 | 1.1:+72074806 | None:intergenic |
| TCCATCATGATCAGGAAGAT+GGG | 0.501810 | 1.1:-72074872 | MS.gene006262:intron |
| TTTGTACAGTTACAGCAGAT+GGG | 0.509779 | 1.1:-72075670 | MS.gene006262:intron |
| GCAGGTCTAATAAATGTGGT+TGG | 0.514107 | 1.1:-72074323 | MS.gene006262:intron |
| CCACATACCTATGTGATTGG+TGG | 0.516243 | 1.1:+72076135 | None:intergenic |
| ATGTGGCCATTCAGCAAGAA+AGG | 0.533159 | 1.1:-72077837 | MS.gene006262:CDS |
| TTGTCTTTGGACAAACTGAA+AGG | 0.538568 | 1.1:+72076175 | None:intergenic |
| GTAATTGTAAGAAATAATGC+AGG | 0.539047 | 1.1:-72076211 | MS.gene006262:intron |
| TGATTTGGCAAAGAAACTCT+GGG | 0.543852 | 1.1:-72073710 | MS.gene006262:CDS |
| ATGTCGCCTCAGAGGCTCAC+AGG | 0.545694 | 1.1:-72075822 | MS.gene006262:CDS |
| GAGATGCTTTGTAAGTTGGT+TGG | 0.546258 | 1.1:+72075608 | None:intergenic |
| ACTGCAAATTCTCTTCATCC+AGG | 0.546611 | 1.1:-72074840 | MS.gene006262:CDS |
| CGTTCACTGCACTGTTATGT+CGG | 0.547282 | 1.1:+72074796 | None:intergenic |
| AGCATTGCACCCACAAGTGA+AGG | 0.549189 | 1.1:-72073797 | MS.gene006262:CDS |
| TGTCTTTGGACAAACTGAAA+GGG | 0.554943 | 1.1:+72076176 | None:intergenic |
| AATCAGCGTCCCTTCCATGT+GGG | 0.555356 | 1.1:+72073728 | None:intergenic |
| ACACATGGAATCGATGCTAC+TGG | 0.558914 | 1.1:-72077774 | MS.gene006262:CDS |
| ACACGCAAAAGTAAGAAAGA+AGG | 0.580402 | 1.1:-72075856 | MS.gene006262:CDS |
| CAAAACAACCCCACATGGAA+GGG | 0.582561 | 1.1:-72073737 | MS.gene006262:CDS |
| ACAAAACAACCCCACATGGA+AGG | 0.586260 | 1.1:-72073738 | MS.gene006262:CDS |
| TGTCAAAGATACAATACTCA+AGG | 0.594611 | 1.1:-72076540 | MS.gene006262:CDS |
| CACAGGTTCGCATATTCTGA+AGG | 0.595062 | 1.1:-72075805 | MS.gene006262:CDS |
| ATCAGCGTCCCTTCCATGTG+GGG | 0.601486 | 1.1:+72073729 | None:intergenic |
| AAATCAGCGTCCCTTCCATG+TGG | 0.606536 | 1.1:+72073727 | None:intergenic |
| TTGTACAGTTACAGCAGATG+GGG | 0.610557 | 1.1:-72075669 | MS.gene006262:intron |
| TCATGATCAGGAAGATGGGG+TGG | 0.613846 | 1.1:-72074868 | MS.gene006262:intron |
| CAGTTTGCCACCAATCACAT+AGG | 0.614534 | 1.1:-72076142 | MS.gene006262:intron |
| TCTTACATCAAGATGTTCAG+CGG | 0.618040 | 1.1:+72076422 | None:intergenic |
| GCATTGCACCCACAAGTGAA+GGG | 0.624705 | 1.1:-72073796 | MS.gene006262:CDS |
| TGCGAACCTGTGAGCCTCTG+AGG | 0.625555 | 1.1:+72075816 | None:intergenic |
| CCATCATGATCAGGAAGATG+GGG | 0.633051 | 1.1:-72074871 | MS.gene006262:intron |
| ACTCGTGTCCTTGCTTTGCG+CGG | 0.635714 | 1.1:-72076608 | MS.gene006262:CDS |
| CCAACTTACAAAGCATCTCA+AGG | 0.636423 | 1.1:-72075604 | MS.gene006262:intron |
| TTATGCAGGTCTAATAAATG+TGG | 0.639665 | 1.1:-72074327 | MS.gene006262:intron |
| TGAGCTAAGATCTAACTCCA+TGG | 0.641141 | 1.1:+72076493 | None:intergenic |
| CGACATAACAGTGCAGTGAA+CGG | 0.644050 | 1.1:-72074795 | MS.gene006262:intron |
| CATGAACACCGCGCAAAGCA+AGG | 0.649556 | 1.1:+72076600 | None:intergenic |
| AATTGTTAATGTCGCCTCAG+AGG | 0.651795 | 1.1:-72075830 | MS.gene006262:CDS |
| GTGTACAAAACAACCCCACA+TGG | 0.653434 | 1.1:-72073742 | MS.gene006262:CDS |
| ATGGCATCAAGTTTAGCAGA+GGG | 0.654356 | 1.1:+72076512 | None:intergenic |
| TATGGACCAACCAGTAACAA+TGG | 0.654679 | 1.1:+72077743 | None:intergenic |
| GATTATGGGTGTGAGAAACA+TGG | 0.655252 | 1.1:-72076576 | MS.gene006262:CDS |
| ACTGCTGAACAAGTTACACA+TGG | 0.658849 | 1.1:-72077789 | MS.gene006262:CDS |
| CATGGCATCAAGTTTAGCAG+AGG | 0.683203 | 1.1:+72076511 | None:intergenic |
| GTGATAACAGGAGCATCCAG+CGG | 0.698671 | 1.1:-72076647 | MS.gene006262:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTTATGAATATATTAT+AGG | + | chr1.1:72074063-72074082 | None:intergenic | 10.0% |
| !! | TTAAATATTATTTAACCTAT+AGG | - | chr1.1:72077591-72077610 | MS.gene006262:intron | 10.0% |
| !!! | AATAAAAAAACCAATTTTAA+AGG | + | chr1.1:72077108-72077127 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATTCAGTTGAT+TGG | + | chr1.1:72075439-72075458 | None:intergenic | 15.0% |
| !! | AATATACAACTAAAACAAAT+AGG | + | chr1.1:72076956-72076975 | None:intergenic | 15.0% |
| !! | ATTAAATCTAATCATATCTT+TGG | - | chr1.1:72076426-72076445 | MS.gene006262:intron | 15.0% |
| !! | GTATGCATAAAAAATTATTA+AGG | + | chr1.1:72074175-72074194 | None:intergenic | 15.0% |
| !! | TACTAAAAAAAACTTATACA+AGG | + | chr1.1:72077620-72077639 | None:intergenic | 15.0% |
| !!! | CTTATTTTATTAAGTTCTTT+AGG | - | chr1.1:72074088-72074107 | MS.gene006262:intron | 15.0% |
| !!! | TATATTTTTTATGCAATTTC+TGG | + | chr1.1:72074224-72074243 | None:intergenic | 15.0% |
| !! | AATTGCTTAAAATGTAATCA+AGG | + | chr1.1:72075800-72075819 | None:intergenic | 20.0% |
| !! | ATATCAAAGATAGATTAATG+TGG | + | chr1.1:72076608-72076627 | None:intergenic | 20.0% |
| !! | CAAATGATGATAATACAAAT+TGG | + | chr1.1:72076504-72076523 | None:intergenic | 20.0% |
| !! | GAAATAATTAAGAAAGAAAC+AGG | + | chr1.1:72073805-72073824 | None:intergenic | 20.0% |
| !! | TTCTTAATTATTTCCCAAAA+GGG | - | chr1.1:72073811-72073830 | MS.gene006262:CDS | 20.0% |
| !! | TTTCTAATACTTTCTTTCAT+AGG | + | chr1.1:72077375-72077394 | None:intergenic | 20.0% |
| !! | TTTCTTAATTATTTCCCAAA+AGG | - | chr1.1:72073810-72073829 | MS.gene006262:CDS | 20.0% |
| !!! | AATGTTGTCAAATAGTTTTT+GGG | - | chr1.1:72077286-72077305 | MS.gene006262:intron | 20.0% |
| !!! | AATTTTTTATGCATACCTTT+TGG | - | chr1.1:72074179-72074198 | MS.gene006262:intron | 20.0% |
| !!! | ATGAATTATTTTAATTACGC+AGG | - | chr1.1:72075590-72075609 | MS.gene006262:intron | 20.0% |
| !!! | GTTTTGGTTGATTAATAAAA+AGG | - | chr1.1:72076014-72076033 | MS.gene006262:intron | 20.0% |
| !!! | TAAAAAGATTTTCGTGTAAA+CGG | + | chr1.1:72073970-72073989 | None:intergenic | 20.0% |
| !!! | TCATCAAATGAATTTTCAAA+AGG | + | chr1.1:72075462-72075481 | None:intergenic | 20.0% |
| !!! | TTGATTACATTTTAAGCAAT+TGG | - | chr1.1:72075799-72075818 | MS.gene006262:CDS | 20.0% |
| ! | AAATTGGATAGAGTCAAATA+TGG | + | chr1.1:72074340-72074359 | None:intergenic | 25.0% |
| ! | AAGAAATAATGCAGGAATTA+TGG | - | chr1.1:72075312-72075331 | MS.gene006262:intron | 25.0% |
| ! | AATATAAGCAATATTGTTCG+AGG | + | chr1.1:72077538-72077557 | None:intergenic | 25.0% |
| ! | AATTGGATAGAGTCAAATAT+GGG | + | chr1.1:72074339-72074358 | None:intergenic | 25.0% |
| ! | ATAAAATCAATGACGAATCA+AGG | - | chr1.1:72075744-72075763 | MS.gene006262:intron | 25.0% |
| ! | ATGTTGAATATGAATTATGC+AGG | - | chr1.1:72076781-72076800 | MS.gene006262:intron | 25.0% |
| ! | CAAAATTGTATTCAACCAAA+AGG | + | chr1.1:72074197-72074216 | None:intergenic | 25.0% |
| ! | CGAACAATATTGCTTATATT+AGG | - | chr1.1:72077538-72077557 | MS.gene006262:intron | 25.0% |
| ! | CTAAAACAAATAGGAGTTTA+TGG | + | chr1.1:72076947-72076966 | None:intergenic | 25.0% |
| ! | CTTATTTCCATAAATTCTAC+AGG | - | chr1.1:72076211-72076230 | MS.gene006262:intron | 25.0% |
| ! | GTAATTGTAAGAAATAATGC+AGG | - | chr1.1:72075304-72075323 | MS.gene006262:intron | 25.0% |
| ! | TAAAAAGATGATCGTGTAAA+CGG | - | chr1.1:72073919-72073938 | MS.gene006262:intron | 25.0% |
| ! | TACTTCTACTACATGTTATA+TGG | - | chr1.1:72075940-72075959 | MS.gene006262:intron | 25.0% |
| ! | TATATTCTGTATTTAGCTGT+TGG | - | chr1.1:72076970-72076989 | MS.gene006262:intron | 25.0% |
| ! | TATTGAAGTTGTTAGTTACT+TGG | - | chr1.1:72075176-72075195 | MS.gene006262:intron | 25.0% |
| ! | TCATAGGATAAAATTCATGT+AGG | + | chr1.1:72077359-72077378 | None:intergenic | 25.0% |
| ! | TCCATCAAAAGTTATTGTAA+AGG | + | chr1.1:72076914-72076933 | None:intergenic | 25.0% |
| ! | TTAATAAAAAGGATGTCCTT+AGG | - | chr1.1:72076025-72076044 | MS.gene006262:intron | 25.0% |
| ! | TTATATTAGGAGAAAACATG+TGG | - | chr1.1:72077551-72077570 | MS.gene006262:intron | 25.0% |
| ! | TTATTCGTGTAAATTCACTT+TGG | - | chr1.1:72076757-72076776 | MS.gene006262:intron | 25.0% |
| ! | TTTAGTGCTCTATATTACAA+TGG | + | chr1.1:72077058-72077077 | None:intergenic | 25.0% |
| !! | AACCATTTTCAAAAACCTTA+TGG | + | chr1.1:72074676-72074695 | None:intergenic | 25.0% |
| !! | CAATGTTGTCAAATAGTTTT+TGG | - | chr1.1:72077285-72077304 | MS.gene006262:intron | 25.0% |
| !! | TACAGTATCTTTTAATGCAA+AGG | - | chr1.1:72075536-72075555 | MS.gene006262:intron | 25.0% |
| !! | TATTCTGAACAATTCGTTTT+TGG | - | chr1.1:72074482-72074501 | MS.gene006262:intron | 25.0% |
| !! | TCCTTTACAATAACTTTTGA+TGG | - | chr1.1:72076910-72076929 | MS.gene006262:intron | 25.0% |
| !! | TTTAGTAGTGAATTTTGTTG+AGG | - | chr1.1:72077633-72077652 | MS.gene006262:intron | 25.0% |
| !! | TTTCTCATTCTTGACTTTTT+GGG | - | chr1.1:72076533-72076552 | MS.gene006262:CDS | 25.0% |
| !!! | AATGTTACTGTTTTATTCTC+CGG | - | chr1.1:72075405-72075424 | MS.gene006262:intron | 25.0% |
| !!! | ATCCATAAGGTTTTTGAAAA+TGG | - | chr1.1:72074671-72074690 | MS.gene006262:intron | 25.0% |
| !!! | ATTCTGAACAATTCGTTTTT+GGG | - | chr1.1:72074483-72074502 | MS.gene006262:intron | 25.0% |
| !!! | CGTCATTGATTTTATCAAAA+CGG | + | chr1.1:72075739-72075758 | None:intergenic | 25.0% |
| AACACAAAAAAGTGGTATTG+TGG | + | chr1.1:72074368-72074387 | None:intergenic | 30.0% | |
| AAGAAACCACAATTGAAAGT+TGG | + | chr1.1:72075233-72075252 | None:intergenic | 30.0% | |
| AAGCTATCCTGTAGAATTTA+TGG | + | chr1.1:72076221-72076240 | None:intergenic | 30.0% | |
| AATAACTTGAGTTTGATTCC+TGG | + | chr1.1:72074466-72074485 | None:intergenic | 30.0% | |
| ACTTATACAAGGAATCCTAT+AGG | + | chr1.1:72077609-72077628 | None:intergenic | 30.0% | |
| AGTTAAATCAGTATGTCCTA+TGG | - | chr1.1:72077246-72077265 | MS.gene006262:intron | 30.0% | |
| ATATACAGGGTTTCAAATTG+TGG | + | chr1.1:72074776-72074795 | None:intergenic | 30.0% | |
| ATATGAATTATGCAGGTCAA+AGG | - | chr1.1:72076788-72076807 | MS.gene006262:intron | 30.0% | |
| ATTGGATAGAGTCAAATATG+GGG | + | chr1.1:72074338-72074357 | None:intergenic | 30.0% | |
| CTCTGATGTGTAAATTCAAA+CGG | - | chr1.1:72073892-72073911 | MS.gene006262:intron | 30.0% | |
| TATATGGACATTGTGATAAC+AGG | - | chr1.1:72074856-72074875 | MS.gene006262:CDS | 30.0% | |
| TATGTTCCAACTTTCAATTG+TGG | - | chr1.1:72075224-72075243 | MS.gene006262:intron | 30.0% | |
| TCTCTGACATTTATAACCAT+AGG | + | chr1.1:72077265-72077284 | None:intergenic | 30.0% | |
| TGTCAAAGATACAATACTCA+AGG | - | chr1.1:72074975-72074994 | MS.gene006262:intron | 30.0% | |
| TTAATGTGGAAAAACCAAAC+TGG | + | chr1.1:72076594-72076613 | None:intergenic | 30.0% | |
| TTATGCAGGTCTAATAAATG+TGG | - | chr1.1:72077188-72077207 | MS.gene006262:intron | 30.0% | |
| ! | ATCACATAAGCATAGGTTTT+AGG | - | chr1.1:72074273-72074292 | MS.gene006262:intron | 30.0% |
| ! | CTTTCTCATTCTTGACTTTT+TGG | - | chr1.1:72076532-72076551 | MS.gene006262:CDS | 30.0% |
| ! | TCCCTTTTTCTAATAACAGT+CGG | + | chr1.1:72076464-72076483 | None:intergenic | 30.0% |
| ! | TCCTTATTCCAATTGTTGTT+GGG | - | chr1.1:72077423-72077442 | MS.gene006262:intron | 30.0% |
| ! | TCTCTTGACAAATCTTTTGT+TGG | - | chr1.1:72075619-72075638 | MS.gene006262:CDS | 30.0% |
| ! | TTTTTCTCTTTATCTTCTGC+TGG | - | chr1.1:72074646-72074665 | MS.gene006262:intron | 30.0% |
| !! | TGAGTTTTATGAATGTTAGC+TGG | - | chr1.1:72077159-72077178 | MS.gene006262:intron | 30.0% |
| !! | TGTCAAATAGTTTTTGGGAA+TGG | - | chr1.1:72077291-72077310 | MS.gene006262:intron | 30.0% |
| !! | TTCTGAACAATTCGTTTTTG+GGG | - | chr1.1:72074484-72074503 | MS.gene006262:intron | 30.0% |
| AAAGAAACAGGAAGAGAGTA+TGG | + | chr1.1:72073793-72073812 | None:intergenic | 35.0% | |
| AAAGAACACATACCTACCTA+AGG | + | chr1.1:72076044-72076063 | None:intergenic | 35.0% | |
| ACAAAAAAGTGGTATTGTGG+AGG | + | chr1.1:72074365-72074384 | None:intergenic | 35.0% | |
| ACACGCAAAAGTAAGAAAGA+AGG | - | chr1.1:72075659-72075678 | MS.gene006262:CDS | 35.0% | |
| ACCCAACAACAATTGGAATA+AGG | + | chr1.1:72077427-72077446 | None:intergenic | 35.0% | |
| ACTGTTATGTCGGAAAAGAT+TGG | + | chr1.1:72076712-72076731 | None:intergenic | 35.0% | |
| AGGATTTGGATGAATTATGC+AGG | - | chr1.1:72076808-72076827 | MS.gene006262:intron | 35.0% | |
| ATTACAATGGTCATTCTGAG+TGG | + | chr1.1:72077045-72077064 | None:intergenic | 35.0% | |
| ATTACTTCTCCATCATGATC+AGG | - | chr1.1:72076635-72076654 | MS.gene006262:CDS | 35.0% | |
| ATTATGCAGGTCAAAGGATT+TGG | - | chr1.1:72076794-72076813 | MS.gene006262:intron | 35.0% | |
| ATTATGCAGGTGATAGGATT+TGG | - | chr1.1:72076821-72076840 | MS.gene006262:intron | 35.0% | |
| ATTCCTGGTGAAACAATTCT+TGG | + | chr1.1:72074451-72074470 | None:intergenic | 35.0% | |
| CAAACATTCCTTACAAACTC+CGG | + | chr1.1:72074427-72074446 | None:intergenic | 35.0% | |
| CAGGTCTAATAAATGTGGTT+GGG | - | chr1.1:72077193-72077212 | MS.gene006262:intron | 35.0% | |
| CCAAAACATTAAGACAAGTG+AGG | + | chr1.1:72076001-72076020 | None:intergenic | 35.0% | |
| GACTATTGTAATGCGGTATA+TGG | - | chr1.1:72074840-72074859 | MS.gene006262:CDS | 35.0% | |
| GACTGTTATTAGAAAAAGGG+AGG | - | chr1.1:72076463-72076482 | MS.gene006262:CDS | 35.0% | |
| GATGTGTGACTATTGTAATG+CGG | - | chr1.1:72074833-72074852 | MS.gene006262:CDS | 35.0% | |
| GCATCTGAGTATAATTCTTC+TGG | - | chr1.1:72075066-72075085 | MS.gene006262:intron | 35.0% | |
| GCCGACTGTTATTAGAAAAA+GGG | - | chr1.1:72076460-72076479 | MS.gene006262:CDS | 35.0% | |
| GGATCCATTCCCAAAATAAT+GGG | + | chr1.1:72077319-72077338 | None:intergenic | 35.0% | |
| GTCCTTATTCCAATTGTTGT+TGG | - | chr1.1:72077422-72077441 | MS.gene006262:intron | 35.0% | |
| TAAAAAGGATGTCCTTAGGT+AGG | - | chr1.1:72076029-72076048 | MS.gene006262:intron | 35.0% | |
| TATTACACGATCCAAACCAT+TGG | + | chr1.1:72074514-72074533 | None:intergenic | 35.0% | |
| TCTTACATCAAGATGTTCAG+CGG | + | chr1.1:72075096-72075115 | None:intergenic | 35.0% | |
| TGTCTTTGGACAAACTGAAA+GGG | + | chr1.1:72075342-72075361 | None:intergenic | 35.0% | |
| TGTGAGTAAATATGCCAGTT+TGG | - | chr1.1:72076577-72076596 | MS.gene006262:CDS | 35.0% | |
| TTACCACATACCTATGTGAT+TGG | + | chr1.1:72075386-72075405 | None:intergenic | 35.0% | |
| TTATTTACTACCACCACTAG+TGG | + | chr1.1:72074548-72074567 | None:intergenic | 35.0% | |
| TTGGATAGAGTCAAATATGG+GGG | + | chr1.1:72074337-72074356 | None:intergenic | 35.0% | |
| TTGTCTTTGGACAAACTGAA+AGG | + | chr1.1:72075343-72075362 | None:intergenic | 35.0% | |
| TTTGTACAGTTACAGCAGAT+GGG | - | chr1.1:72075845-72075864 | MS.gene006262:CDS | 35.0% | |
| ! | AGATTGGTAACAATTGTTCC+TGG | + | chr1.1:72076696-72076715 | None:intergenic | 35.0% |
| ! | ATGGTTTGTGAATCTAACTG+TGG | - | chr1.1:72074690-72074709 | MS.gene006262:intron | 35.0% |
| ! | CCTCACTTGTCTTAATGTTT+TGG | - | chr1.1:72075998-72076017 | MS.gene006262:intron | 35.0% |
| ! | GGAATGGATCCCATTATTTT+GGG | - | chr1.1:72077307-72077326 | MS.gene006262:intron | 35.0% |
| ! | GTTTTGCATCACATAAGCAT+AGG | - | chr1.1:72074266-72074285 | MS.gene006262:intron | 35.0% |
| ! | TAGGTCTCACCATTTTATGT+GGG | + | chr1.1:72077340-72077359 | None:intergenic | 35.0% |
| ! | TGATTTGGCAAAGAAACTCT+GGG | - | chr1.1:72077805-72077824 | MS.gene006262:CDS | 35.0% |
| ! | TGCCGACTGTTATTAGAAAA+AGG | - | chr1.1:72076459-72076478 | MS.gene006262:CDS | 35.0% |
| ! | TGGTTTGTGAATCTAACTGT+GGG | - | chr1.1:72074691-72074710 | MS.gene006262:intron | 35.0% |
| !! | CAATGTCGCTAAGTTGTTTT+TGG | - | chr1.1:72076188-72076207 | MS.gene006262:CDS | 35.0% |
| !! | CACTCACAAGCCTTTAAAAT+TGG | - | chr1.1:72077095-72077114 | MS.gene006262:intron | 35.0% |
| !! | TACTGATTTAACTTACCTGC+TGG | + | chr1.1:72077239-72077258 | None:intergenic | 35.0% |
| !! | TATCCCTTTAAAACCACTAG+TGG | - | chr1.1:72074532-72074551 | MS.gene006262:intron | 35.0% |
| !!! | AAGGTGTTTCTGGTTTTTCA+TGG | - | chr1.1:72073697-72073716 | MS.gene006262:CDS | 35.0% |
| !!! | ACTTTTTTGTGTTAACCCTC+CGG | - | chr1.1:72074375-72074394 | MS.gene006262:intron | 35.0% |
| !!! | TTAGCTGGTTTGTTTTATGC+AGG | - | chr1.1:72077174-72077193 | MS.gene006262:intron | 35.0% |
| AACAGACCATAAAGCCAAAG+AGG | + | chr1.1:72076141-72076160 | None:intergenic | 40.0% | |
| AATTGTTAATGTCGCCTCAG+AGG | - | chr1.1:72075685-72075704 | MS.gene006262:intron | 40.0% | |
| ACTGCAAATTCTCTTCATCC+AGG | - | chr1.1:72076675-72076694 | MS.gene006262:intron | 40.0% | |
| ACTGCTGAACAAGTTACACA+TGG | - | chr1.1:72073726-72073745 | MS.gene006262:CDS | 40.0% | |
| AGACTATAGCATGACCTCTT+TGG | - | chr1.1:72076124-72076143 | MS.gene006262:intron | 40.0% | |
| AGCCAACTGATAAAAGCTCA+AGG | + | chr1.1:72076073-72076092 | None:intergenic | 40.0% | |
| AGGGTTTCAAATTGTGGTTG+TGG | + | chr1.1:72074770-72074789 | None:intergenic | 40.0% | |
| ATGGCATCAAGTTTAGCAGA+GGG | + | chr1.1:72075006-72075025 | None:intergenic | 40.0% | |
| CAGTGTAGCATGCATATACA+GGG | + | chr1.1:72074789-72074808 | None:intergenic | 40.0% | |
| CAGTTGATTGGATCTTACTC+CGG | + | chr1.1:72075427-72075446 | None:intergenic | 40.0% | |
| CCTTGAGATGCTTTGTAAGT+TGG | + | chr1.1:72075914-72075933 | None:intergenic | 40.0% | |
| CGGAGTTTGTAAGGAATGTT+TGG | - | chr1.1:72074425-72074444 | MS.gene006262:intron | 40.0% | |
| CTGCAGTTCAATGTTGTCTT+TGG | + | chr1.1:72075356-72075375 | None:intergenic | 40.0% | |
| CTGGGATTTCAGCATCAATT+TGG | - | chr1.1:72077823-72077842 | MS.gene006262:CDS | 40.0% | |
| CTTTGTACAGTTACAGCAGA+TGG | - | chr1.1:72075844-72075863 | MS.gene006262:CDS | 40.0% | |
| GAAACACCTTTCTTGCTGAA+TGG | + | chr1.1:72073687-72073706 | None:intergenic | 40.0% | |
| GATTATGGGTGTGAGAAACA+TGG | - | chr1.1:72074939-72074958 | MS.gene006262:intron | 40.0% | |
| GCAGGTCTAATAAATGTGGT+TGG | - | chr1.1:72077192-72077211 | MS.gene006262:intron | 40.0% | |
| GCCAACTGATAAAAGCTCAA+GGG | + | chr1.1:72076072-72076091 | None:intergenic | 40.0% | |
| GGAATGGATCCCACATAAAA+TGG | - | chr1.1:72077328-72077347 | MS.gene006262:intron | 40.0% | |
| GGAGGGTTAACACAAAAAAG+TGG | + | chr1.1:72074376-72074395 | None:intergenic | 40.0% | |
| GGAGTTAGATCTTAGCTCAT+TGG | - | chr1.1:72075026-72075045 | MS.gene006262:intron | 40.0% | |
| GGATGAATTATGCAGGTGAT+AGG | - | chr1.1:72076815-72076834 | MS.gene006262:intron | 40.0% | |
| GGGATCCATTCCCAAAATAA+TGG | + | chr1.1:72077320-72077339 | None:intergenic | 40.0% | |
| TATGGACCAACCAGTAACAA+TGG | + | chr1.1:72073775-72073794 | None:intergenic | 40.0% | |
| TCAGTGTAGCATGCATATAC+AGG | + | chr1.1:72074790-72074809 | None:intergenic | 40.0% | |
| TCCATCATGATCAGGAAGAT+GGG | - | chr1.1:72076643-72076662 | MS.gene006262:intron | 40.0% | |
| TCTGCTGTAACTGTACAAAG+AGG | + | chr1.1:72075844-72075863 | None:intergenic | 40.0% | |
| TCTTCTGCTGGATATCCATA+AGG | - | chr1.1:72074658-72074677 | MS.gene006262:intron | 40.0% | |
| TGAGCTAAGATCTAACTCCA+TGG | + | chr1.1:72075025-72075044 | None:intergenic | 40.0% | |
| TGGTATTGTGGAGGCTAAAT+TGG | + | chr1.1:72074356-72074375 | None:intergenic | 40.0% | |
| TGTGATGAAAAATGTCCAGC+AGG | - | chr1.1:72077221-72077240 | MS.gene006262:intron | 40.0% | |
| TTGTACAGTTACAGCAGATG+GGG | - | chr1.1:72075846-72075865 | MS.gene006262:CDS | 40.0% | |
| ! | CCAACTTACAAAGCATCTCA+AGG | - | chr1.1:72075911-72075930 | MS.gene006262:intron | 40.0% |
| ! | GCATGAAGAGATACCCTTTT+GGG | + | chr1.1:72073827-72073846 | None:intergenic | 40.0% |
| ! | GGGAATGGATCCCATTATTT+TGG | - | chr1.1:72077306-72077325 | MS.gene006262:intron | 40.0% |
| ! | GTAGGTCTCACCATTTTATG+TGG | + | chr1.1:72077341-72077360 | None:intergenic | 40.0% |
| ! | TCCCTTGAGCTTTTATCAGT+TGG | - | chr1.1:72076068-72076087 | MS.gene006262:intron | 40.0% |
| ! | TGCATGAAGAGATACCCTTT+TGG | + | chr1.1:72073828-72073847 | None:intergenic | 40.0% |
| ! | TGCGATTCTCTTTGTTGTGA+GGG | + | chr1.1:72077467-72077486 | None:intergenic | 40.0% |
| ! | TTGGTAATCCGGAGTTTGTA+AGG | - | chr1.1:72074416-72074435 | MS.gene006262:intron | 40.0% |
| !! | CTCATTCTTGACTTTTTGGG+TGG | - | chr1.1:72076536-72076555 | MS.gene006262:CDS | 40.0% |
| !! | CTGATTTGGCAAAGAAACTC+TGG | - | chr1.1:72077804-72077823 | MS.gene006262:CDS | 40.0% |
| !! | CTTTGGCTTTATGGTCTGTT+TGG | - | chr1.1:72076141-72076160 | MS.gene006262:intron | 40.0% |
| !! | GAGATGCTTTGTAAGTTGGT+TGG | + | chr1.1:72075910-72075929 | None:intergenic | 40.0% |
| !! | TTCAGCAAGAAAGGTGTTTC+TGG | - | chr1.1:72073687-72073706 | MS.gene006262:CDS | 40.0% |
| !!! | ACCACCACTAGTGGTTTTAA+AGG | + | chr1.1:72074539-72074558 | None:intergenic | 40.0% |
| !!! | CCACCACTAGTGGTTTTAAA+GGG | + | chr1.1:72074538-72074557 | None:intergenic | 40.0% |
| !!! | GGATCCCATTATTTTGGGAA+TGG | - | chr1.1:72077312-72077331 | MS.gene006262:intron | 40.0% |
| ACAAAACAACCCCACATGGA+AGG | - | chr1.1:72077777-72077796 | MS.gene006262:CDS | 45.0% | |
| ACACATGGAATCGATGCTAC+TGG | - | chr1.1:72073741-72073760 | MS.gene006262:CDS | 45.0% | |
| AGAAAAAGGGAGGTGATTCG+TGG | - | chr1.1:72076473-72076492 | MS.gene006262:CDS | 45.0% | |
| ATGTGGCCATTCAGCAAGAA+AGG | - | chr1.1:72073678-72073697 | MS.gene006262:CDS | 45.0% | |
| CAAAACAACCCCACATGGAA+GGG | - | chr1.1:72077778-72077797 | MS.gene006262:CDS | 45.0% | |
| CACAGGTTCGCATATTCTGA+AGG | - | chr1.1:72075710-72075729 | MS.gene006262:intron | 45.0% | |
| CACTAACTCCCTTCACTTGT+GGG | + | chr1.1:72077730-72077749 | None:intergenic | 45.0% | |
| CAGTTTGCCACCAATCACAT+AGG | - | chr1.1:72075373-72075392 | MS.gene006262:intron | 45.0% | |
| CATGGCATCAAGTTTAGCAG+AGG | + | chr1.1:72075007-72075026 | None:intergenic | 45.0% | |
| CCACATACCTATGTGATTGG+TGG | + | chr1.1:72075383-72075402 | None:intergenic | 45.0% | |
| CCACCAATCACATAGGTATG+TGG | - | chr1.1:72075380-72075399 | MS.gene006262:intron | 45.0% | |
| CCATCATGATCAGGAAGATG+GGG | - | chr1.1:72076644-72076663 | MS.gene006262:intron | 45.0% | |
| CGACATAACAGTGCAGTGAA+CGG | - | chr1.1:72076720-72076739 | MS.gene006262:intron | 45.0% | |
| CGCGGTGTTCATGTGATTAT+GGG | - | chr1.1:72074925-72074944 | MS.gene006262:intron | 45.0% | |
| CGTTCACTGCACTGTTATGT+CGG | + | chr1.1:72076722-72076741 | None:intergenic | 45.0% | |
| CTCCATCATGATCAGGAAGA+TGG | - | chr1.1:72076642-72076661 | MS.gene006262:intron | 45.0% | |
| CTCTGCTAAACTTGATGCCA+TGG | - | chr1.1:72075005-72075024 | MS.gene006262:intron | 45.0% | |
| GTGTACAAAACAACCCCACA+TGG | - | chr1.1:72077773-72077792 | MS.gene006262:CDS | 45.0% | |
| TCACTGCCATTGTTACTGGT+TGG | - | chr1.1:72073766-72073785 | MS.gene006262:CDS | 45.0% | |
| TGGCCAAGAATTGTTTCACC+AGG | - | chr1.1:72074445-72074464 | MS.gene006262:intron | 45.0% | |
| TGGTCATTCTGAGTGGTCAT+TGG | + | chr1.1:72077038-72077057 | None:intergenic | 45.0% | |
| TTTGGGGAAGTCCAATGGTT+TGG | - | chr1.1:72074500-72074519 | MS.gene006262:intron | 45.0% | |
| ! | CCAATTGTTGTTGGGTCTAG+CGG | - | chr1.1:72077431-72077450 | MS.gene006262:intron | 45.0% |
| ! | CTGCGATTCTCTTTGTTGTG+AGG | + | chr1.1:72077468-72077487 | None:intergenic | 45.0% |
| !! | CCCTTTAAAACCACTAGTGG+TGG | - | chr1.1:72074535-72074554 | MS.gene006262:intron | 45.0% |
| !! | GCATGACCTCTTTGGCTTTA+TGG | - | chr1.1:72076132-72076151 | MS.gene006262:intron | 45.0% |
| !! | TCGTTTTTGGGGAAGTCCAA+TGG | - | chr1.1:72074495-72074514 | MS.gene006262:intron | 45.0% |
| !!! | ATAATATTTAAGTTTTTTTT+AGG | + | chr1.1:72077582-72077601 | None:intergenic | 5.0% |
| AAATCAGCGTCCCTTCCATG+TGG | + | chr1.1:72077791-72077810 | None:intergenic | 50.0% | |
| AATCAGCGTCCCTTCCATGT+GGG | + | chr1.1:72077790-72077809 | None:intergenic | 50.0% | |
| AGCATTGCACCCACAAGTGA+AGG | - | chr1.1:72077718-72077737 | MS.gene006262:intron | 50.0% | |
| CCACAAGTGAAGGGAGTTAG+TGG | - | chr1.1:72077728-72077747 | MS.gene006262:intron | 50.0% | |
| CCACTAACTCCCTTCACTTG+TGG | + | chr1.1:72077731-72077750 | None:intergenic | 50.0% | |
| CCCCATCTTCCTGATCATGA+TGG | + | chr1.1:72076647-72076666 | None:intergenic | 50.0% | |
| CCGCTAGACCCAACAACAAT+TGG | + | chr1.1:72077434-72077453 | None:intergenic | 50.0% | |
| GCATTGCACCCACAAGTGAA+GGG | - | chr1.1:72077719-72077738 | MS.gene006262:intron | 50.0% | |
| GCGCGGTGTTCATGTGATTA+TGG | - | chr1.1:72074924-72074943 | MS.gene006262:intron | 50.0% | |
| GGTCTCACTGCCATTGTTAC+TGG | - | chr1.1:72073762-72073781 | MS.gene006262:CDS | 50.0% | |
| TACAGCAGATGGGGTGCATA+TGG | - | chr1.1:72075855-72075874 | MS.gene006262:CDS | 50.0% | |
| TCATGATCAGGAAGATGGGG+TGG | - | chr1.1:72076647-72076666 | MS.gene006262:intron | 50.0% | |
| ! | ACATGGAAGGGACGCTGATT+TGG | - | chr1.1:72077790-72077809 | MS.gene006262:CDS | 50.0% |
| ! | GAGAAAGGGGCTTGGTAATC+CGG | - | chr1.1:72074405-72074424 | MS.gene006262:intron | 50.0% |
| !! | GTGATAACAGGAGCATCCAG+CGG | - | chr1.1:72074868-72074887 | MS.gene006262:intron | 50.0% |
| ACTCGTGTCCTTGCTTTGCG+CGG | - | chr1.1:72074907-72074926 | MS.gene006262:intron | 55.0% | |
| AGCCCCTTTCTCCTGAGAAC+CGG | + | chr1.1:72074397-72074416 | None:intergenic | 55.0% | |
| ATCAGCGTCCCTTCCATGTG+GGG | + | chr1.1:72077789-72077808 | None:intergenic | 55.0% | |
| CATGAACACCGCGCAAAGCA+AGG | + | chr1.1:72074918-72074937 | None:intergenic | 55.0% | |
| CCTCCGGTTCTCAGGAGAAA+GGG | - | chr1.1:72074391-72074410 | MS.gene006262:intron | 55.0% | |
| CCTTTCTCCTGAGAACCGGA+GGG | + | chr1.1:72074393-72074412 | None:intergenic | 55.0% | |
| CTCCGGTTCTCAGGAGAAAG+GGG | - | chr1.1:72074392-72074411 | MS.gene006262:intron | 55.0% | |
| GTGTTAACCCTCCGGTTCTC+AGG | - | chr1.1:72074383-72074402 | MS.gene006262:intron | 55.0% | |
| GTTCTCAGGAGAAAGGGGCT+TGG | - | chr1.1:72074397-72074416 | MS.gene006262:intron | 55.0% | |
| ATGTCGCCTCAGAGGCTCAC+AGG | - | chr1.1:72075693-72075712 | MS.gene006262:intron | 60.0% | |
| CCCTCCGGTTCTCAGGAGAA+AGG | - | chr1.1:72074390-72074409 | MS.gene006262:intron | 60.0% | |
| CCCTTTCTCCTGAGAACCGG+AGG | + | chr1.1:72074394-72074413 | None:intergenic | 60.0% | |
| TGCGAACCTGTGAGCCTCTG+AGG | + | chr1.1:72075702-72075721 | None:intergenic | 60.0% | |
| !! | ACAGGAGCATCCAGCGGCAT+TGG | - | chr1.1:72074874-72074893 | MS.gene006262:intron | 60.0% |
| AGTCTCAGCGCCAATGCCGC+TGG | + | chr1.1:72074887-72074906 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 72073678 | 72077859 | 72073678 | ID=MS.gene006262 |
| chr1.1 | mRNA | 72073678 | 72077859 | 72073678 | ID=MS.gene006262.t1;Parent=MS.gene006262 |
| chr1.1 | exon | 72077754 | 72077859 | 72077754 | ID=MS.gene006262.t1.exon1;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72077754 | 72077859 | 72077754 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72076428 | 72076659 | 72076428 | ID=MS.gene006262.t1.exon2;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72076428 | 72076659 | 72076428 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72076143 | 72076222 | 72076143 | ID=MS.gene006262.t1.exon3;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72076143 | 72076222 | 72076143 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72075772 | 72075925 | 72075772 | ID=MS.gene006262.t1.exon4;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72075772 | 72075925 | 72075772 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72075605 | 72075683 | 72075605 | ID=MS.gene006262.t1.exon5;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72075605 | 72075683 | 72075605 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72074796 | 72074880 | 72074796 | ID=MS.gene006262.t1.exon6;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72074796 | 72074880 | 72074796 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72074295 | 72074341 | 72074295 | ID=MS.gene006262.t1.exon7;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72074295 | 72074341 | 72074295 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| chr1.1 | exon | 72073678 | 72073842 | 72073678 | ID=MS.gene006262.t1.exon8;Parent=MS.gene006262.t1 |
| chr1.1 | CDS | 72073678 | 72073842 | 72073678 | ID=cds.MS.gene006262.t1;Parent=MS.gene006262.t1 |
| Gene Sequence |
| Protein sequence |
