Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34137.t1 | RHN81782.1 | 98.1 | 315 | 6 | 0 | 1 | 315 | 42 | 356 | 5.10E-172 | 613.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34137.t1 | Q6RVV4 | 93.0 | 316 | 21 | 1 | 1 | 315 | 1 | 316 | 3.0e-165 | 582.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34137.t1 | A0A072W040 | 98.1 | 315 | 6 | 0 | 1 | 315 | 1 | 315 | 3.7e-172 | 613.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene34137 | 0.803238 | 3.84E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene34137 | 0.849051 | 4.14E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene34137 | 0.838738 | 2.41E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene34137 | 0.80999 | 1.44E-50 | -1.69E-46 |
| MS.gene050122 | MS.gene34137 | 0.811812 | 5.80E-51 | -1.69E-46 |
| MS.gene050400 | MS.gene34137 | 0.815674 | 8.19E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene34137 | -0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene34137 | 0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene34137 | 0.820978 | 5.15E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene34137 | 0.856192 | 3.80E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene34137 | 0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene34137 | 0.812982 | 3.22E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene34137 | 0.856714 | 2.67E-62 | -1.69E-46 |
| MS.gene051255 | MS.gene34137 | 0.827319 | 1.67E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene34137 | 0.838158 | 3.40E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene34137 | 0.82435 | 8.46E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene34137 | 0.827248 | 1.74E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene34137 | 0.811493 | 6.81E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene34137 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene34137 | 0.818908 | 1.53E-52 | -1.69E-46 |
| MS.gene052136 | MS.gene34137 | 0.839609 | 1.43E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene34137 | 0.838215 | 3.28E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene34137 | 0.828355 | 9.41E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene34137 | 0.816943 | 4.26E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene34137 | 0.811122 | 8.20E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene34137 | 0.825445 | 4.67E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene34137 | 0.841183 | 5.55E-58 | -1.69E-46 |
| MS.gene052414 | MS.gene34137 | 0.864888 | 8.79E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene34137 | 0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene34137 | 0.81313 | 2.99E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene34137 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene34137 | 0.830437 | 2.94E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene34137 | 0.81341 | 2.60E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene34137 | 0.841415 | 4.82E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene34137 | 0.825515 | 4.50E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene34137 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene34137 | 0.80128 | 9.70E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene34137 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene34137 | 0.820825 | 5.59E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene34137 | 0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene34137 | 0.818163 | 2.26E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene34137 | 0.865092 | 7.59E-65 | -1.69E-46 |
| MS.gene055539 | MS.gene34137 | 0.830387 | 3.02E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene34137 | 0.816936 | 4.28E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene34137 | 0.850538 | 1.59E-60 | -1.69E-46 |
| MS.gene055744 | MS.gene34137 | 0.852105 | 5.74E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene34137 | 0.835909 | 1.28E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene34137 | 0.829462 | 5.08E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene34137 | 0.813767 | 2.17E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene34137 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene34137 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene34137 | 0.852114 | 5.71E-61 | -1.69E-46 |
| MS.gene05664 | MS.gene34137 | 0.845542 | 3.81E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene34137 | 0.83947 | 1.55E-57 | -1.69E-46 |
| MS.gene056796 | MS.gene34137 | 0.810186 | 1.31E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene34137 | 0.808037 | 3.77E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene34137 | 0.801209 | 1.00E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene34137 | 0.823864 | 1.10E-53 | -1.69E-46 |
| MS.gene057289 | MS.gene34137 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene34137 | 0.819673 | 1.03E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene34137 | 0.822227 | 2.65E-53 | -1.69E-46 |
| MS.gene057503 | MS.gene34137 | 0.801122 | 1.04E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene34137 | 0.857719 | 1.35E-62 | -1.69E-46 |
| MS.gene057749 | MS.gene34137 | 0.816968 | 4.21E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene34137 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene34137 | 0.813198 | 2.89E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene34137 | 0.823081 | 1.68E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene34137 | 0.826651 | 2.41E-54 | -1.69E-46 |
| MS.gene058365 | MS.gene34137 | 0.801804 | 7.57E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene34137 | 0.820043 | 8.45E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene34137 | 0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene34137 | 0.846109 | 2.67E-59 | -1.69E-46 |
| MS.gene058948 | MS.gene34137 | 0.862388 | 5.25E-64 | -1.69E-46 |
| MS.gene05907 | MS.gene34137 | 0.80736 | 5.25E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene34137 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene34137 | 0.808099 | 3.66E-50 | -1.69E-46 |
| MS.gene05959 | MS.gene34137 | 0.800133 | 1.66E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene34137 | 0.818094 | 2.35E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene34137 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene34137 | 0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene34137 | 0.830897 | 2.27E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene34137 | 0.831755 | 1.39E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene34137 | 0.806264 | 8.95E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene34137 | 0.825631 | 4.22E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene34137 | 0.811654 | 6.28E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene34137 | 0.828641 | 8.03E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene34137 | 0.825493 | 4.55E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene34137 | 0.834999 | 2.17E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene34137 | 0.871237 | 7.96E-67 | -1.69E-46 |
| MS.gene061154 | MS.gene34137 | 0.902052 | 1.44E-78 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34137.t1 | MTR_1g100305 | 98.095 | 315 | 6 | 0 | 1 | 315 | 1 | 315 | 0.0 | 639 |
| MS.gene34137.t1 | MTR_1g100315 | 82.857 | 315 | 54 | 0 | 1 | 315 | 1 | 315 | 0.0 | 558 |
| MS.gene34137.t1 | MTR_1g100395 | 80.000 | 315 | 63 | 0 | 1 | 315 | 1 | 315 | 0.0 | 532 |
| MS.gene34137.t1 | MTR_1g100335 | 80.000 | 315 | 63 | 0 | 1 | 315 | 1 | 315 | 0.0 | 531 |
| MS.gene34137.t1 | MTR_8g098415 | 69.206 | 315 | 97 | 0 | 1 | 315 | 1 | 315 | 1.84e-165 | 462 |
| MS.gene34137.t1 | MTR_8g098415 | 70.130 | 308 | 92 | 0 | 1 | 308 | 1 | 308 | 7.43e-164 | 459 |
| MS.gene34137.t1 | MTR_6g053550 | 68.730 | 307 | 93 | 1 | 10 | 313 | 18 | 324 | 3.96e-155 | 437 |
| MS.gene34137.t1 | MTR_1g100335 | 80.488 | 246 | 48 | 0 | 1 | 246 | 1 | 246 | 3.22e-147 | 415 |
| MS.gene34137.t1 | MTR_1g100335 | 80.488 | 246 | 48 | 0 | 1 | 246 | 1 | 246 | 3.78e-147 | 414 |
| MS.gene34137.t1 | MTR_8g098415 | 68.605 | 258 | 81 | 0 | 58 | 315 | 1 | 258 | 5.74e-134 | 381 |
| MS.gene34137.t1 | MTR_6g053600 | 69.084 | 262 | 78 | 1 | 10 | 268 | 4 | 265 | 1.97e-129 | 370 |
| MS.gene34137.t1 | MTR_1g068970 | 58.361 | 305 | 127 | 0 | 8 | 312 | 13 | 317 | 2.93e-129 | 371 |
| MS.gene34137.t1 | MTR_7g099850 | 58.497 | 306 | 126 | 1 | 8 | 312 | 13 | 318 | 6.76e-128 | 368 |
| MS.gene34137.t1 | MTR_8g098415 | 72.603 | 219 | 60 | 0 | 1 | 219 | 1 | 219 | 3.59e-116 | 334 |
| MS.gene34137.t1 | MTR_1g068970 | 56.000 | 250 | 110 | 0 | 63 | 312 | 1 | 250 | 1.03e-100 | 296 |
| MS.gene34137.t1 | MTR_3g077410 | 44.231 | 312 | 170 | 2 | 8 | 315 | 13 | 324 | 7.14e-90 | 271 |
| MS.gene34137.t1 | MTR_4g105310 | 43.590 | 312 | 172 | 2 | 8 | 315 | 24 | 335 | 4.19e-83 | 255 |
| MS.gene34137.t1 | MTR_8g099995 | 43.607 | 305 | 168 | 3 | 8 | 308 | 13 | 317 | 2.06e-81 | 250 |
| MS.gene34137.t1 | MTR_4g105310 | 45.679 | 243 | 128 | 2 | 8 | 246 | 24 | 266 | 2.93e-65 | 206 |
| MS.gene34137.t1 | MTR_1g100345 | 77.027 | 74 | 17 | 0 | 33 | 106 | 4 | 77 | 3.40e-32 | 115 |
| MS.gene34137.t1 | MTR_6g081020 | 35.145 | 276 | 160 | 9 | 30 | 294 | 62 | 329 | 3.73e-28 | 112 |
| MS.gene34137.t1 | MTR_6g041980 | 27.863 | 262 | 175 | 6 | 25 | 285 | 62 | 310 | 3.29e-20 | 90.1 |
| MS.gene34137.t1 | MTR_2g079710 | 28.754 | 313 | 188 | 10 | 31 | 312 | 88 | 396 | 3.90e-20 | 90.5 |
| MS.gene34137.t1 | MTR_3g091070 | 28.852 | 305 | 163 | 12 | 32 | 312 | 43 | 317 | 8.75e-19 | 85.5 |
| MS.gene34137.t1 | MTR_6g453040 | 30.392 | 306 | 175 | 12 | 32 | 312 | 43 | 335 | 4.96e-18 | 84.0 |
| MS.gene34137.t1 | MTR_3g009190 | 29.836 | 305 | 178 | 10 | 32 | 312 | 65 | 357 | 6.01e-18 | 84.0 |
| MS.gene34137.t1 | MTR_3g009190 | 29.836 | 305 | 178 | 10 | 32 | 312 | 83 | 375 | 6.89e-18 | 83.6 |
| MS.gene34137.t1 | MTR_6g041980 | 27.619 | 210 | 143 | 3 | 4 | 213 | 43 | 243 | 9.81e-16 | 76.3 |
| MS.gene34137.t1 | MTR_3g009190 | 29.236 | 301 | 183 | 9 | 33 | 312 | 65 | 356 | 1.03e-15 | 77.4 |
| MS.gene34137.t1 | MTR_8g022500 | 38.053 | 113 | 45 | 2 | 34 | 146 | 431 | 518 | 9.50e-14 | 72.0 |
| MS.gene34137.t1 | MTR_3g098470 | 27.740 | 292 | 150 | 12 | 32 | 285 | 37 | 305 | 8.54e-12 | 65.1 |
| MS.gene34137.t1 | MTR_6g453040 | 32.367 | 207 | 111 | 7 | 32 | 220 | 65 | 260 | 4.33e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34137.t1 | AT4G23430 | 70.833 | 312 | 90 | 1 | 1 | 311 | 1 | 312 | 3.49e-166 | 465 |
| MS.gene34137.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 4.76e-166 | 464 |
| MS.gene34137.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 4.76e-166 | 464 |
| MS.gene34137.t1 | AT4G23430 | 70.513 | 312 | 89 | 2 | 1 | 311 | 1 | 310 | 1.69e-163 | 458 |
| MS.gene34137.t1 | AT4G23420 | 70.323 | 310 | 91 | 1 | 3 | 311 | 20 | 329 | 2.48e-162 | 456 |
| MS.gene34137.t1 | AT4G11410 | 67.937 | 315 | 101 | 0 | 1 | 315 | 1 | 315 | 1.19e-160 | 451 |
| MS.gene34137.t1 | AT4G23430 | 68.269 | 312 | 88 | 2 | 1 | 311 | 1 | 302 | 2.33e-156 | 439 |
| MS.gene34137.t1 | AT4G23430 | 67.949 | 312 | 87 | 3 | 1 | 311 | 1 | 300 | 9.56e-154 | 433 |
| MS.gene34137.t1 | AT4G23420 | 71.374 | 262 | 74 | 1 | 1 | 261 | 1 | 262 | 1.92e-137 | 390 |
| MS.gene34137.t1 | AT4G23420 | 74.089 | 247 | 63 | 1 | 1 | 246 | 1 | 247 | 6.83e-134 | 381 |
| MS.gene34137.t1 | AT4G11410 | 71.429 | 245 | 70 | 0 | 1 | 245 | 1 | 245 | 3.66e-127 | 363 |
| MS.gene34137.t1 | AT5G02540 | 59.283 | 307 | 125 | 0 | 6 | 312 | 10 | 316 | 7.11e-125 | 360 |
| MS.gene34137.t1 | AT2G37540 | 55.700 | 307 | 136 | 0 | 6 | 312 | 10 | 316 | 6.30e-124 | 358 |
| MS.gene34137.t1 | AT2G37540 | 58.898 | 236 | 97 | 0 | 6 | 241 | 10 | 245 | 2.51e-99 | 293 |
| MS.gene34137.t1 | AT4G24050 | 44.231 | 312 | 167 | 4 | 8 | 314 | 13 | 322 | 2.08e-83 | 255 |
| MS.gene34137.t1 | AT5G50130 | 45.307 | 309 | 165 | 3 | 8 | 312 | 13 | 321 | 5.00e-83 | 254 |
| MS.gene34137.t1 | AT5G50130 | 44.484 | 281 | 155 | 1 | 33 | 312 | 7 | 287 | 1.69e-76 | 236 |
| MS.gene34137.t1 | AT5G50130 | 44.681 | 282 | 154 | 2 | 33 | 312 | 7 | 288 | 7.35e-76 | 235 |
| MS.gene34137.t1 | AT1G64590 | 43.813 | 299 | 165 | 2 | 17 | 312 | 22 | 320 | 2.13e-71 | 224 |
| MS.gene34137.t1 | AT5G50130 | 44.528 | 265 | 143 | 2 | 8 | 268 | 13 | 277 | 4.41e-69 | 218 |
| MS.gene34137.t1 | AT5G50130 | 44.737 | 266 | 142 | 3 | 8 | 268 | 13 | 278 | 1.71e-68 | 216 |
| MS.gene34137.t1 | AT5G50130 | 47.863 | 234 | 120 | 1 | 8 | 239 | 13 | 246 | 8.63e-68 | 213 |
| MS.gene34137.t1 | AT5G50130 | 48.085 | 235 | 119 | 2 | 8 | 239 | 13 | 247 | 3.63e-67 | 211 |
| MS.gene34137.t1 | AT4G24050 | 41.481 | 270 | 153 | 3 | 2 | 268 | 7 | 274 | 1.77e-66 | 210 |
| MS.gene34137.t1 | AT5G50130 | 43.882 | 237 | 131 | 1 | 34 | 268 | 8 | 244 | 4.45e-62 | 199 |
| MS.gene34137.t1 | AT5G50130 | 44.118 | 238 | 130 | 2 | 34 | 268 | 8 | 245 | 2.03e-61 | 197 |
| MS.gene34137.t1 | AT4G27760 | 31.373 | 306 | 175 | 10 | 30 | 312 | 58 | 351 | 4.77e-31 | 120 |
| MS.gene34137.t1 | AT5G53090 | 31.894 | 301 | 180 | 8 | 30 | 312 | 57 | 350 | 2.03e-28 | 113 |
| MS.gene34137.t1 | AT5G53100 | 31.148 | 305 | 180 | 9 | 30 | 312 | 45 | 341 | 4.16e-27 | 109 |
| MS.gene34137.t1 | AT5G54190 | 27.974 | 311 | 189 | 10 | 33 | 312 | 96 | 402 | 1.52e-24 | 102 |
| MS.gene34137.t1 | AT1G03630 | 31.090 | 312 | 181 | 11 | 31 | 312 | 91 | 398 | 1.71e-24 | 102 |
| MS.gene34137.t1 | AT1G03630 | 31.090 | 312 | 181 | 11 | 31 | 312 | 89 | 396 | 1.83e-24 | 102 |
| MS.gene34137.t1 | AT5G04070 | 28.956 | 297 | 181 | 9 | 32 | 308 | 61 | 347 | 1.45e-23 | 99.8 |
| MS.gene34137.t1 | AT4G09750 | 28.014 | 282 | 189 | 6 | 4 | 285 | 20 | 287 | 3.41e-22 | 95.1 |
| MS.gene34137.t1 | AT4G27440 | 29.260 | 311 | 185 | 10 | 33 | 312 | 92 | 398 | 8.21e-22 | 95.1 |
| MS.gene34137.t1 | AT4G27440 | 29.260 | 311 | 185 | 10 | 33 | 312 | 92 | 398 | 8.21e-22 | 95.1 |
| MS.gene34137.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 63 | 354 | 3.74e-19 | 87.4 |
| MS.gene34137.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 63 | 354 | 3.74e-19 | 87.4 |
| MS.gene34137.t1 | AT5G15940 | 27.000 | 300 | 191 | 10 | 32 | 311 | 62 | 353 | 3.74e-19 | 87.4 |
| MS.gene34137.t1 | AT5G54190 | 25.263 | 285 | 179 | 9 | 58 | 312 | 1 | 281 | 3.87e-17 | 80.5 |
| MS.gene34137.t1 | AT5G15940 | 27.477 | 222 | 144 | 5 | 32 | 240 | 63 | 280 | 2.45e-15 | 75.9 |
| MS.gene34137.t1 | AT5G61830 | 26.482 | 253 | 143 | 9 | 32 | 269 | 39 | 263 | 3.74e-11 | 63.5 |
| MS.gene34137.t1 | AT5G61830 | 26.482 | 253 | 143 | 9 | 32 | 269 | 39 | 263 | 3.74e-11 | 63.5 |
Find 72 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGTTCAATGTTGTCTT+TGG | 0.213224 | 1.2:+75072528 | None:intergenic |
| GCGCGGTGTCCATGTGATTA+TGG | 0.226322 | 1.2:-75072955 | MS.gene34137:CDS |
| TTCAGCAAGAAAGGTGTTTC+TGG | 0.229466 | 1.2:-75074176 | MS.gene34137:CDS |
| GGTCTCACTGCCATTGTTAC+TGG | 0.236378 | 1.2:-75074101 | MS.gene34137:intron |
| AAGAAATAATGCAGGAATTA+TGG | 0.267594 | 1.2:-75072569 | MS.gene34137:CDS |
| CTGGGATTTCAGCATCAATT+TGG | 0.274620 | 1.2:-75069909 | MS.gene34137:CDS |
| GCATCTGAGTATAATTCTTC+TGG | 0.288049 | 1.2:-75072813 | MS.gene34137:CDS |
| CGCGGTGTCCATGTGATTAT+GGG | 0.296114 | 1.2:-75072954 | MS.gene34137:CDS |
| ACATGGAAGGGACGCTGATT+TGG | 0.331121 | 1.2:-75069942 | MS.gene34137:CDS |
| CACTAACTCCCTTCACTTGT+GGG | 0.347652 | 1.2:+75070005 | None:intergenic |
| GGAGTTAGATCTTAGCTCAT+TGG | 0.400097 | 1.2:-75072853 | MS.gene34137:CDS |
| CCACTAACTCCCTTCACTTG+TGG | 0.412556 | 1.2:+75070004 | None:intergenic |
| CTGATTTGGCAAAGAAACTC+TGG | 0.413553 | 1.2:-75069928 | MS.gene34137:CDS |
| TTACCACATACCTATGTGAT+TGG | 0.416556 | 1.2:+75072498 | None:intergenic |
| CCTTGAGATGCTTTGTAAGC+TGG | 0.423994 | 1.2:+75071946 | None:intergenic |
| TACAGCAGATGGGGTGCATA+TGG | 0.428773 | 1.2:-75072002 | MS.gene34137:CDS |
| CTCCATCATGATCAGGAAGA+TGG | 0.437998 | 1.2:-75071212 | MS.gene34137:intron |
| ACAGGAGCATCCAGCGGCAT+TGG | 0.439266 | 1.2:-75073005 | MS.gene34137:intron |
| AGATTGGTGACAATTGTTCC+TGG | 0.444579 | 1.2:+75071161 | None:intergenic |
| CCACAAGTGAAGGGAGTTAG+TGG | 0.447541 | 1.2:-75070004 | MS.gene34137:CDS |
| AAGGTGTTTCTGGTTTCTCA+TGG | 0.455178 | 1.2:-75074166 | MS.gene34137:CDS |
| GAAACACCTTTCTTGCTGAA+TGG | 0.471111 | 1.2:+75074179 | None:intergenic |
| AGTCTCAGCGCCAATGCCGC+TGG | 0.474761 | 1.2:+75072995 | None:intergenic |
| CTTTATACAGTTACAGCAGA+TGG | 0.483123 | 1.2:-75072013 | MS.gene34137:intron |
| CTCTGCTAAACTTGATGCCA+TGG | 0.490137 | 1.2:-75072874 | MS.gene34137:CDS |
| ATAAAATCAATGACGAATCA+AGG | 0.490214 | 1.2:-75072134 | MS.gene34137:intron |
| CAGGTCTAATAAATGTGGTT+GGG | 0.491530 | 1.2:-75070657 | MS.gene34137:CDS |
| TCCATCATGATCAGGAAGAT+GGG | 0.501810 | 1.2:-75071211 | MS.gene34137:intron |
| TTTATACAGTTACAGCAGAT+GGG | 0.509343 | 1.2:-75072012 | MS.gene34137:intron |
| GCAGGTCTAATAAATGTGGT+TGG | 0.514107 | 1.2:-75070658 | MS.gene34137:intron |
| CCACATACCTATGTGATTGG+TGG | 0.516243 | 1.2:+75072501 | None:intergenic |
| ATGTGGCCATTCAGCAAGAA+AGG | 0.533159 | 1.2:-75074185 | MS.gene34137:CDS |
| TTGTCTTTGGACAAACTGAA+AGG | 0.538568 | 1.2:+75072541 | None:intergenic |
| GTAATTGTAAGAAATAATGC+AGG | 0.539047 | 1.2:-75072577 | MS.gene34137:intron |
| GAGATGCTTTGTAAGCTGGT+TGG | 0.539479 | 1.2:+75071950 | None:intergenic |
| TGATTTGGCAAAGAAACTCT+GGG | 0.543852 | 1.2:-75069927 | MS.gene34137:CDS |
| ATGTCGCCTCAGAGGCTCAC+AGG | 0.545694 | 1.2:-75072185 | MS.gene34137:CDS |
| ACTGCAAATTCTCTTCATCC+AGG | 0.546611 | 1.2:-75071179 | MS.gene34137:CDS |
| CGTTCACTGCACTGTTATGT+CGG | 0.547282 | 1.2:+75071135 | None:intergenic |
| AGCATTGCACCCACAAGTGA+AGG | 0.549189 | 1.2:-75070014 | MS.gene34137:CDS |
| TGTCTTTGGACAAACTGAAA+GGG | 0.554943 | 1.2:+75072542 | None:intergenic |
| AATCAGCGTCCCTTCCATGT+GGG | 0.555356 | 1.2:+75069945 | None:intergenic |
| CAGTTTGCCACCAATCACAT+AGG | 0.557845 | 1.2:-75072508 | MS.gene34137:intron |
| ACACATGGAATCGATGCTAC+TGG | 0.558914 | 1.2:-75074122 | MS.gene34137:CDS |
| ACTGTTATGTCGGAAAAGAT+TGG | 0.564967 | 1.2:+75071145 | None:intergenic |
| ACACGCAAAAGTAAGAAAGA+AGG | 0.568031 | 1.2:-75072219 | MS.gene34137:CDS |
| CAAAACAACCCCACATGGAA+GGG | 0.575384 | 1.2:-75069954 | MS.gene34137:CDS |
| GCAAAACAACCCCACATGGA+AGG | 0.579083 | 1.2:-75069955 | MS.gene34137:CDS |
| TGTCAAAGATACAATACTCA+AGG | 0.594611 | 1.2:-75072904 | MS.gene34137:CDS |
| CACAGGTTCGCATATTCTGA+AGG | 0.595062 | 1.2:-75072168 | MS.gene34137:CDS |
| ATCAGCGTCCCTTCCATGTG+GGG | 0.601486 | 1.2:+75069946 | None:intergenic |
| AAATCAGCGTCCCTTCCATG+TGG | 0.606536 | 1.2:+75069944 | None:intergenic |
| TCATGATCAGGAAGATGGGG+TGG | 0.613846 | 1.2:-75071207 | MS.gene34137:intron |
| TCTTACATCAAGATGTTCAG+CGG | 0.618040 | 1.2:+75072786 | None:intergenic |
| TTATACAGTTACAGCAGATG+GGG | 0.618136 | 1.2:-75072011 | MS.gene34137:intron |
| GCATTGCACCCACAAGTGAA+GGG | 0.624705 | 1.2:-75070013 | MS.gene34137:CDS |
| GTGTGCAAAACAACCCCACA+TGG | 0.624749 | 1.2:-75069959 | MS.gene34137:CDS |
| ACTCGTGTGCTTGCTTTGCG+CGG | 0.625329 | 1.2:-75072972 | MS.gene34137:CDS |
| TGCGAACCTGTGAGCCTCTG+AGG | 0.625555 | 1.2:+75072179 | None:intergenic |
| CCATCATGATCAGGAAGATG+GGG | 0.633051 | 1.2:-75071210 | MS.gene34137:intron |
| CCAGCTTACAAAGCATCTCA+AGG | 0.634090 | 1.2:-75071946 | MS.gene34137:intron |
| TTATGCAGGTCTAATAAATG+TGG | 0.639665 | 1.2:-75070662 | MS.gene34137:intron |
| TGAGCTAAGATCTAACTCCA+TGG | 0.641141 | 1.2:+75072857 | None:intergenic |
| TTCTCACACCCATAATCACA+TGG | 0.642138 | 1.2:+75072946 | None:intergenic |
| CGACATAACAGTGCAGTGAA+CGG | 0.644050 | 1.2:-75071134 | MS.gene34137:intron |
| AATTGTTAATGTCGCCTCAG+AGG | 0.651795 | 1.2:-75072193 | MS.gene34137:CDS |
| ATGGCATCAAGTTTAGCAGA+GGG | 0.654356 | 1.2:+75072876 | None:intergenic |
| TATGGACCAACCAGTAACAA+TGG | 0.654679 | 1.2:+75074091 | None:intergenic |
| GATTATGGGTGTGAGAAACA+TGG | 0.655252 | 1.2:-75072940 | MS.gene34137:CDS |
| ACTGCTGAACAAGTTACACA+TGG | 0.658849 | 1.2:-75074137 | MS.gene34137:CDS |
| CATGGCATCAAGTTTAGCAG+AGG | 0.683203 | 1.2:+75072875 | None:intergenic |
| GTGGTAACAGGAGCATCCAG+CGG | 0.686163 | 1.2:-75073011 | MS.gene34137:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAATTAAGAAATAAAT+AGG | + | chr1.2:75070022-75070041 | None:intergenic | 10.0% |
| !! | TTAAATATTATTTAACCTAT+AGG | - | chr1.2:75073939-75073958 | MS.gene34137:intron | 10.0% |
| !!! | AAAAAAAAAACCAATTTTAA+AGG | + | chr1.2:75073341-75073360 | None:intergenic | 10.0% |
| !! | AAAAAATAAATTCAGTTGAT+TGG | + | chr1.2:75071638-75071657 | None:intergenic | 15.0% |
| !! | AACGTTTATGAATATATTAT+AGG | + | chr1.2:75070280-75070299 | None:intergenic | 15.0% |
| !! | AATATACAACTAAAACAAAT+AGG | + | chr1.2:75073182-75073201 | None:intergenic | 15.0% |
| !! | ATTAAATCTAATCATATCTT+TGG | - | chr1.2:75072651-75072670 | MS.gene34137:intron | 15.0% |
| !! | CAAATGATTATAATACAAAT+TGG | + | chr1.2:75072729-75072748 | None:intergenic | 15.0% |
| !! | TACTAAAAAAAACTTATACA+AGG | + | chr1.2:75073968-75073987 | None:intergenic | 15.0% |
| !! | TGATAACTTATATTGAATTA+TGG | + | chr1.2:75072193-75072212 | None:intergenic | 15.0% |
| !! | ATATCAAAGATAGATTAATG+TGG | + | chr1.2:75072834-75072853 | None:intergenic | 20.0% |
| !! | ATATGCATAAAAAACTACTA+AGG | + | chr1.2:75070337-75070356 | None:intergenic | 20.0% |
| !! | ATTAATCATGATTTATCTCT+TGG | - | chr1.2:75070785-75070804 | MS.gene34137:intron | 20.0% |
| !! | TTCTTAATTATTTCCCAAAA+GGG | - | chr1.2:75070028-75070047 | MS.gene34137:CDS | 20.0% |
| !! | TTTAGTGCTATATATTACAA+TGG | + | chr1.2:75073291-75073310 | None:intergenic | 20.0% |
| !! | TTTCTAATACTTTCTTTCAT+AGG | + | chr1.2:75073723-75073742 | None:intergenic | 20.0% |
| !! | TTTCTTAATTATTTCCCAAA+AGG | - | chr1.2:75070027-75070046 | MS.gene34137:CDS | 20.0% |
| !!! | AATGTTACTATTTTATTCTC+CGG | - | chr1.2:75071604-75071623 | MS.gene34137:intron | 20.0% |
| !!! | ACTCCAATTTTATTAATGTA+GGG | - | chr1.2:75074022-75074041 | MS.gene34137:intron | 20.0% |
| !!! | AGTTTTTTATGCATATCTTT+TGG | - | chr1.2:75070341-75070360 | MS.gene34137:intron | 20.0% |
| !!! | ATGAATTATTTTAATTACGC+AGG | - | chr1.2:75071792-75071811 | MS.gene34137:intron | 20.0% |
| !!! | GTTTTGGTTGATTAATAAAA+AGG | - | chr1.2:75072237-75072256 | MS.gene34137:CDS | 20.0% |
| !!! | TAAAAAGATTTTCGTGTAAA+GGG | + | chr1.2:75070187-75070206 | None:intergenic | 20.0% |
| !!! | TACTCCAATTTTATTAATGT+AGG | - | chr1.2:75074021-75074040 | MS.gene34137:intron | 20.0% |
| !!! | TCATCAAATGAATTTTCAAA+AGG | + | chr1.2:75071663-75071682 | None:intergenic | 20.0% |
| !!! | TTAAAAAGATTTTCGTGTAA+AGG | + | chr1.2:75070188-75070207 | None:intergenic | 20.0% |
| ! | AAATAAATAGGAAGAGAGTA+TGG | + | chr1.2:75070010-75070029 | None:intergenic | 25.0% |
| ! | AAATAAGCCAAAAACAACTT+AGG | + | chr1.2:75072423-75072442 | None:intergenic | 25.0% |
| ! | AAATTGGATAGAGTCAAATA+TGG | + | chr1.2:75070489-75070508 | None:intergenic | 25.0% |
| ! | AAGAAATAATGCAGGAATTA+TGG | - | chr1.2:75071511-75071530 | MS.gene34137:intron | 25.0% |
| ! | AATAAGCCAAAAACAACTTA+GGG | + | chr1.2:75072422-75072441 | None:intergenic | 25.0% |
| ! | AATTGCTTAAAATGCAATCA+AGG | + | chr1.2:75072002-75072021 | None:intergenic | 25.0% |
| ! | AATTGGATAGAGTCAAATAT+GGG | + | chr1.2:75070488-75070507 | None:intergenic | 25.0% |
| ! | ATAAAATCAATGACGAATCA+AGG | - | chr1.2:75071946-75071965 | MS.gene34137:intron | 25.0% |
| ! | ATGTTGAATATGAATTATGC+AGG | - | chr1.2:75073007-75073026 | MS.gene34137:intron | 25.0% |
| ! | CTAAAACAAATAGGAGTTTA+TGG | + | chr1.2:75073173-75073192 | None:intergenic | 25.0% |
| ! | CTCTGATATGTAAATTCAAA+CGG | - | chr1.2:75070109-75070128 | MS.gene34137:intron | 25.0% |
| ! | GTAAGAAAATGAGATTAACT+TGG | - | chr1.2:75071311-75071330 | MS.gene34137:intron | 25.0% |
| ! | GTAATTGTAAGAAATAATGC+AGG | - | chr1.2:75071503-75071522 | MS.gene34137:intron | 25.0% |
| ! | TAACAACATTCTCTCTTATT+GGG | - | chr1.2:75073625-75073644 | MS.gene34137:intron | 25.0% |
| ! | TACTTCTACTACATGTTATA+TGG | - | chr1.2:75072163-75072182 | MS.gene34137:CDS | 25.0% |
| ! | TATATTCTGTATTTAGCTGT+TGG | - | chr1.2:75073196-75073215 | MS.gene34137:intron | 25.0% |
| ! | TATTGCATTAACTTTGTGTA+CGG | - | chr1.2:75073592-75073611 | MS.gene34137:intron | 25.0% |
| ! | TCATAGGATAAAATTGATGT+AGG | + | chr1.2:75073707-75073726 | None:intergenic | 25.0% |
| ! | TCCATCAAAAGTTATTGTAA+AGG | + | chr1.2:75073140-75073159 | None:intergenic | 25.0% |
| ! | TTAATAAAAAGGATGTCCTT+AGG | - | chr1.2:75072248-75072267 | MS.gene34137:CDS | 25.0% |
| ! | TTATAATGCACGAATAATCT+CGG | - | chr1.2:75073569-75073588 | MS.gene34137:intron | 25.0% |
| ! | TTATATTAGGAGAAAACATG+TGG | - | chr1.2:75073899-75073918 | MS.gene34137:intron | 25.0% |
| ! | TTATTCGTGTAAATTCACTT+TGG | - | chr1.2:75072983-75073002 | MS.gene34137:CDS | 25.0% |
| !! | CAATGTTGTCAAATAGTTTT+TGG | - | chr1.2:75073515-75073534 | MS.gene34137:intron | 25.0% |
| !! | CATATAGATCCCATTATTTT+GGG | - | chr1.2:75073655-75073674 | MS.gene34137:intron | 25.0% |
| !! | TACAGTATCTTTTAATGCAA+AGG | - | chr1.2:75071738-75071757 | MS.gene34137:intron | 25.0% |
| !! | TCATATAGATCCCATTATTT+TGG | - | chr1.2:75073654-75073673 | MS.gene34137:intron | 25.0% |
| !! | TCCTTTACAATAACTTTTGA+TGG | - | chr1.2:75073136-75073155 | MS.gene34137:intron | 25.0% |
| !! | TGTAATTAAGAAAGCACAAT+TGG | + | chr1.2:75071439-75071458 | None:intergenic | 25.0% |
| !! | TTGATTGCATTTTAAGCAAT+TGG | - | chr1.2:75072001-75072020 | MS.gene34137:CDS | 25.0% |
| !! | TTTCTCATTCTTGACTTTTT+GGG | - | chr1.2:75072758-75072777 | MS.gene34137:intron | 25.0% |
| !!! | CGTCATTGATTTTATCAAAA+CGG | + | chr1.2:75071941-75071960 | None:intergenic | 25.0% |
| AACACAAAAAAGTGGTATTG+CGG | + | chr1.2:75070517-75070536 | None:intergenic | 30.0% | |
| ACTTATACAAGGAATCCTAT+AGG | + | chr1.2:75073957-75073976 | None:intergenic | 30.0% | |
| AGGATTTGGATAAATTATGC+AGG | - | chr1.2:75073034-75073053 | MS.gene34137:intron | 30.0% | |
| AGTTAAATCAGTATGTGCTA+TGG | - | chr1.2:75073476-75073495 | MS.gene34137:intron | 30.0% | |
| ATATACAGGGTTTCAAATTG+TGG | + | chr1.2:75070946-75070965 | None:intergenic | 30.0% | |
| ATATGAATTATGCAGGTCAA+AGG | - | chr1.2:75073014-75073033 | MS.gene34137:intron | 30.0% | |
| ATTGGATAGAGTCAAATATG+GGG | + | chr1.2:75070487-75070506 | None:intergenic | 30.0% | |
| CTAACAACATTCTCTCTTAT+TGG | - | chr1.2:75073624-75073643 | MS.gene34137:intron | 30.0% | |
| CTTATTTCCATAAACTCTAC+AGG | - | chr1.2:75072436-75072455 | MS.gene34137:intron | 30.0% | |
| GCTCCCTACATTAATAAAAT+TGG | + | chr1.2:75074028-75074047 | None:intergenic | 30.0% | |
| GTCTTAGATCTTTATCGAAA+AGG | + | chr1.2:75070463-75070482 | None:intergenic | 30.0% | |
| TGTCAAAGATACAATACTCA+AGG | - | chr1.2:75071176-75071195 | MS.gene34137:CDS | 30.0% | |
| TTAATGTGGAAAAACCAAAC+TGG | + | chr1.2:75072820-75072839 | None:intergenic | 30.0% | |
| TTATGCAGGTCTAATAAATG+TGG | - | chr1.2:75073418-75073437 | MS.gene34137:intron | 30.0% | |
| TTTATACAGTTACAGCAGAT+GGG | - | chr1.2:75072068-75072087 | MS.gene34137:intron | 30.0% | |
| ! | AACCATTTTCAAAAACCTTC+TGG | + | chr1.2:75070847-75070866 | None:intergenic | 30.0% |
| ! | ATGGTTTGTGAATCTAATTG+TGG | - | chr1.2:75070861-75070880 | MS.gene34137:intron | 30.0% |
| ! | CTTTCTCATTCTTGACTTTT+TGG | - | chr1.2:75072757-75072776 | MS.gene34137:intron | 30.0% |
| ! | GATAACTTGAGTTTGATTTC+TGG | + | chr1.2:75070616-75070635 | None:intergenic | 30.0% |
| ! | TCCCTTTTTCTAATAACAGT+CGG | + | chr1.2:75072689-75072708 | None:intergenic | 30.0% |
| ! | TCCTTATTCCAATTGTTGTT+GGG | - | chr1.2:75073771-75073790 | MS.gene34137:intron | 30.0% |
| ! | TCTCTTGACAAATCTTTTGT+TGG | - | chr1.2:75071821-75071840 | MS.gene34137:intron | 30.0% |
| ! | TGGTTTGTGAATCTAATTGT+GGG | - | chr1.2:75070862-75070881 | MS.gene34137:intron | 30.0% |
| ! | TTTTATACACTCTACCAAAC+AGG | + | chr1.2:75072383-75072402 | None:intergenic | 30.0% |
| !! | ATCCAGAAGGTTTTTGAAAA+TGG | - | chr1.2:75070842-75070861 | MS.gene34137:intron | 30.0% |
| !! | ATTTCTGGTGAAACAATACT+TGG | + | chr1.2:75070601-75070620 | None:intergenic | 30.0% |
| !! | TATCCCTTTAAAACTACTAG+TGG | - | chr1.2:75070696-75070715 | MS.gene34137:intron | 30.0% |
| !! | TGAGTTTTATGAATGTTAGC+TGG | - | chr1.2:75073389-75073408 | MS.gene34137:intron | 30.0% |
| AAAGAACACATACCTACCTA+AGG | + | chr1.2:75072267-75072286 | None:intergenic | 35.0% | |
| AACTTTGTGTACGGAAAGAA+GGG | - | chr1.2:75073601-75073620 | MS.gene34137:intron | 35.0% | |
| AAGATGATCGTGTAAACTGA+TGG | - | chr1.2:75070140-75070159 | MS.gene34137:intron | 35.0% | |
| AAGCTATCCTGTAGAGTTTA+TGG | + | chr1.2:75072446-75072465 | None:intergenic | 35.0% | |
| ACACGCAAAAGTAAGAAAGA+AGG | - | chr1.2:75071861-75071880 | MS.gene34137:intron | 35.0% | |
| ACCCAACAACAATTGGAATA+AGG | + | chr1.2:75073775-75073794 | None:intergenic | 35.0% | |
| ACTGTTATGTCGGAAAAGAT+TGG | + | chr1.2:75072938-75072957 | None:intergenic | 35.0% | |
| ATTACAATGGTCATTCTGAG+TGG | + | chr1.2:75073278-75073297 | None:intergenic | 35.0% | |
| ATTACTTCTCCATCATGATC+AGG | - | chr1.2:75072861-75072880 | MS.gene34137:CDS | 35.0% | |
| ATTATGCAGGTCAAAGGATT+TGG | - | chr1.2:75073020-75073039 | MS.gene34137:intron | 35.0% | |
| ATTATGCAGGTGATAGGATT+TGG | - | chr1.2:75073047-75073066 | MS.gene34137:intron | 35.0% | |
| CAATGTAGCATGCATATACA+GGG | + | chr1.2:75070959-75070978 | None:intergenic | 35.0% | |
| CAGGTCTAATAAATGTGGTT+GGG | - | chr1.2:75073423-75073442 | MS.gene34137:intron | 35.0% | |
| CCAAAACATTAAGACAAGTG+AGG | + | chr1.2:75072224-75072243 | None:intergenic | 35.0% | |
| CTGAAGTTCAATGTTGTCTT+TGG | + | chr1.2:75071555-75071574 | None:intergenic | 35.0% | |
| CTTTATACAGTTACAGCAGA+TGG | - | chr1.2:75072067-75072086 | MS.gene34137:intron | 35.0% | |
| GACTGTTATTAGAAAAAGGG+AGG | - | chr1.2:75072688-75072707 | MS.gene34137:intron | 35.0% | |
| GCATCTGAGTATAATTCTTC+TGG | - | chr1.2:75071267-75071286 | MS.gene34137:intron | 35.0% | |
| GCCGACTGTTATTAGAAAAA+GGG | - | chr1.2:75072685-75072704 | MS.gene34137:intron | 35.0% | |
| GGATAAATTATGCAGGTGAT+AGG | - | chr1.2:75073041-75073060 | MS.gene34137:intron | 35.0% | |
| GGATCCATTCCCAAAATAAT+GGG | + | chr1.2:75073667-75073686 | None:intergenic | 35.0% | |
| GTCCTTATTCCAATTGTTGT+TGG | - | chr1.2:75073770-75073789 | MS.gene34137:intron | 35.0% | |
| TAAAAAGGATGTCCTTAGGT+AGG | - | chr1.2:75072252-75072271 | MS.gene34137:CDS | 35.0% | |
| TAACTTTGTGTACGGAAAGA+AGG | - | chr1.2:75073600-75073619 | MS.gene34137:intron | 35.0% | |
| TATATGGACATTGTGGTAAC+AGG | - | chr1.2:75071057-75071076 | MS.gene34137:intron | 35.0% | |
| TATCCTGAACAATTCGTCTT+TGG | - | chr1.2:75070632-75070651 | MS.gene34137:CDS | 35.0% | |
| TCAATGTAGCATGCATATAC+AGG | + | chr1.2:75070960-75070979 | None:intergenic | 35.0% | |
| TCTGCTGTAACTGTATAAAG+AGG | + | chr1.2:75072067-75072086 | None:intergenic | 35.0% | |
| TCTTACATCAAGATGTTCAG+CGG | + | chr1.2:75071297-75071316 | None:intergenic | 35.0% | |
| TGTCTTTGGACAAACTGAAA+GGG | + | chr1.2:75071541-75071560 | None:intergenic | 35.0% | |
| TGTGAGTAAATATGCCAGTT+TGG | - | chr1.2:75072803-75072822 | MS.gene34137:CDS | 35.0% | |
| TTACCACATACCTATGTGAT+TGG | + | chr1.2:75071585-75071604 | None:intergenic | 35.0% | |
| TTATACAGTTACAGCAGATG+GGG | - | chr1.2:75072069-75072088 | MS.gene34137:intron | 35.0% | |
| TTGGATAGAGTCAAATATGG+GGG | + | chr1.2:75070486-75070505 | None:intergenic | 35.0% | |
| TTGTCTTTGGACAAACTGAA+AGG | + | chr1.2:75071542-75071561 | None:intergenic | 35.0% | |
| TTTCTCTCTTTATCTTCTGC+TGG | - | chr1.2:75070812-75070831 | MS.gene34137:intron | 35.0% | |
| ! | AAGAAAGCACAATTGGAAGT+TGG | + | chr1.2:75071432-75071451 | None:intergenic | 35.0% |
| ! | ATCACATAAGCATGGGTTTT+AGG | - | chr1.2:75070421-75070440 | MS.gene34137:intron | 35.0% |
| ! | CCTCACTTGTCTTAATGTTT+TGG | - | chr1.2:75072221-75072240 | MS.gene34137:CDS | 35.0% |
| ! | TAGGTCTCACCATTTTATGT+GGG | + | chr1.2:75073688-75073707 | None:intergenic | 35.0% |
| ! | TGATTTGGCAAAGAAACTCT+GGG | - | chr1.2:75074153-75074172 | MS.gene34137:CDS | 35.0% |
| ! | TGCCGACTGTTATTAGAAAA+AGG | - | chr1.2:75072684-75072703 | MS.gene34137:intron | 35.0% |
| !! | CAATGTCCCTAAGTTGTTTT+TGG | - | chr1.2:75072413-75072432 | MS.gene34137:intron | 35.0% |
| !! | CACTCACAAGCCTTTAAAAT+TGG | - | chr1.2:75073328-75073347 | MS.gene34137:intron | 35.0% |
| !! | TACTGATTTAACTTACCTGC+TGG | + | chr1.2:75073469-75073488 | None:intergenic | 35.0% |
| !!! | ACCACCACTAGTAGTTTTAA+AGG | + | chr1.2:75070703-75070722 | None:intergenic | 35.0% |
| !!! | AGATCCCATTATTTTGGGAA+TGG | - | chr1.2:75073660-75073679 | MS.gene34137:intron | 35.0% |
| !!! | CCACCACTAGTAGTTTTAAA+GGG | + | chr1.2:75070702-75070721 | None:intergenic | 35.0% |
| !!! | GACTATTTTAACGCGGTATA+TGG | - | chr1.2:75071041-75071060 | MS.gene34137:intron | 35.0% |
| !!! | GATGTGTGACTATTTTAACG+CGG | - | chr1.2:75071034-75071053 | MS.gene34137:intron | 35.0% |
| !!! | TTAGCTGGTTTGTTTTATGC+AGG | - | chr1.2:75073404-75073423 | MS.gene34137:intron | 35.0% |
| AATTGTTAATGTCGCCTCAG+AGG | - | chr1.2:75071887-75071906 | MS.gene34137:intron | 40.0% | |
| ACAAAAAAGTGGTATTGCGG+AGG | + | chr1.2:75070514-75070533 | None:intergenic | 40.0% | |
| ACTGCAAATTCTCTTCATCC+AGG | - | chr1.2:75072901-75072920 | MS.gene34137:CDS | 40.0% | |
| ACTGCTGAACAAGTTACACA+TGG | - | chr1.2:75069943-75069962 | MS.gene34137:CDS | 40.0% | |
| AGACTATAGCATGACCTCTT+TGG | - | chr1.2:75072349-75072368 | MS.gene34137:intron | 40.0% | |
| AGCCAACTGATAAAAGCTCA+AGG | + | chr1.2:75072298-75072317 | None:intergenic | 40.0% | |
| AGCTTTGCATCACATAAGCA+TGG | - | chr1.2:75070413-75070432 | MS.gene34137:intron | 40.0% | |
| AGGGTTTCAAATTGTGGTTG+TGG | + | chr1.2:75070940-75070959 | None:intergenic | 40.0% | |
| ATGGCATCAAGTTTAGCAGA+GGG | + | chr1.2:75071207-75071226 | None:intergenic | 40.0% | |
| CAGTTGATTGGATCTTACTC+CGG | + | chr1.2:75071626-75071645 | None:intergenic | 40.0% | |
| CTGGGATTTCAGCATCAATT+TGG | - | chr1.2:75074171-75074190 | MS.gene34137:CDS | 40.0% | |
| CTTACAAACTCCAGATTACC+AGG | + | chr1.2:75070568-75070587 | None:intergenic | 40.0% | |
| GAAACACCTTTCTTGCTGAA+TGG | + | chr1.2:75069904-75069923 | None:intergenic | 40.0% | |
| GATTATGGGTGTGAGAAACA+TGG | - | chr1.2:75071140-75071159 | MS.gene34137:CDS | 40.0% | |
| GCAGGTCTAATAAATGTGGT+TGG | - | chr1.2:75073422-75073441 | MS.gene34137:intron | 40.0% | |
| GCCAACTGATAAAAGCTCAA+GGG | + | chr1.2:75072297-75072316 | None:intergenic | 40.0% | |
| GCTTTGCATCACATAAGCAT+GGG | - | chr1.2:75070414-75070433 | MS.gene34137:intron | 40.0% | |
| GGAATGGATCCCACATAAAA+TGG | - | chr1.2:75073676-75073695 | MS.gene34137:intron | 40.0% | |
| GGAGGGTTAACACAAAAAAG+TGG | + | chr1.2:75070525-75070544 | None:intergenic | 40.0% | |
| GGAGTTAGATCTTAGCTCAT+TGG | - | chr1.2:75071227-75071246 | MS.gene34137:intron | 40.0% | |
| GGGATCCATTCCCAAAATAA+TGG | + | chr1.2:75073668-75073687 | None:intergenic | 40.0% | |
| TATGGACCAACCAGTAACAA+TGG | + | chr1.2:75069992-75070011 | None:intergenic | 40.0% | |
| TCACCAAAGACGAATTGTTC+AGG | + | chr1.2:75070638-75070657 | None:intergenic | 40.0% | |
| TCCATCATGATCAGGAAGAT+GGG | - | chr1.2:75072869-75072888 | MS.gene34137:CDS | 40.0% | |
| TCTGAGTGGTCATTACTCAT+TGG | + | chr1.2:75073264-75073283 | None:intergenic | 40.0% | |
| TGAGCTAAGATCTAACTCCA+TGG | + | chr1.2:75071226-75071245 | None:intergenic | 40.0% | |
| TGCTGGATTACATATCCAGA+AGG | - | chr1.2:75070829-75070848 | MS.gene34137:intron | 40.0% | |
| TGGATAGAGTCAAATATGGG+GGG | + | chr1.2:75070485-75070504 | None:intergenic | 40.0% | |
| TGTGATGAAAAATGTCCAGC+AGG | - | chr1.2:75073451-75073470 | MS.gene34137:intron | 40.0% | |
| TTAACCACTTGAGTCCAACT+TGG | - | chr1.2:75070664-75070683 | MS.gene34137:intron | 40.0% | |
| TTCTCACACCCATAATCACA+TGG | + | chr1.2:75071137-75071156 | None:intergenic | 40.0% | |
| ! | AGATTGGTGACAATTGTTCC+TGG | + | chr1.2:75072922-75072941 | None:intergenic | 40.0% |
| ! | CTGGTAATCTGGAGTTTGTA+AGG | - | chr1.2:75070566-75070585 | MS.gene34137:intron | 40.0% |
| ! | GCATGAAGAGATACCCTTTT+GGG | + | chr1.2:75070044-75070063 | None:intergenic | 40.0% |
| ! | GTAGGTCTCACCATTTTATG+TGG | + | chr1.2:75073689-75073708 | None:intergenic | 40.0% |
| ! | TCCCTTGAGCTTTTATCAGT+TGG | - | chr1.2:75072293-75072312 | MS.gene34137:intron | 40.0% |
| ! | TGCATGAAGAGATACCCTTT+TGG | + | chr1.2:75070045-75070064 | None:intergenic | 40.0% |
| ! | TGCGATTCTCTTTGTTGTGA+GGG | + | chr1.2:75073815-75073834 | None:intergenic | 40.0% |
| !! | AAGGTGTTTCTGGTTTCTCA+TGG | - | chr1.2:75069914-75069933 | MS.gene34137:CDS | 40.0% |
| !! | CCCTTTAAAACTACTAGTGG+TGG | - | chr1.2:75070699-75070718 | MS.gene34137:intron | 40.0% |
| !! | CTCATTCTTGACTTTTTGGG+TGG | - | chr1.2:75072761-75072780 | MS.gene34137:intron | 40.0% |
| !! | CTGATTTGGCAAAGAAACTC+TGG | - | chr1.2:75074152-75074171 | MS.gene34137:CDS | 40.0% |
| !! | TTCAGCAAGAAAGGTGTTTC+TGG | - | chr1.2:75069904-75069923 | MS.gene34137:CDS | 40.0% |
| AACGCGGTATATGGACATTG+TGG | - | chr1.2:75071050-75071069 | MS.gene34137:intron | 45.0% | |
| ACACATGGAATCGATGCTAC+TGG | - | chr1.2:75069958-75069977 | MS.gene34137:CDS | 45.0% | |
| AGAAAAAGGGAGGTGATTCG+TGG | - | chr1.2:75072698-75072717 | MS.gene34137:intron | 45.0% | |
| ATGTGGCCATTCAGCAAGAA+AGG | - | chr1.2:75069895-75069914 | MS.gene34137:CDS | 45.0% | |
| CAAAACAACCCCACATGGAA+GGG | - | chr1.2:75074126-75074145 | MS.gene34137:CDS | 45.0% | |
| CACAGGTTCGCATATTCTGA+AGG | - | chr1.2:75071912-75071931 | MS.gene34137:intron | 45.0% | |
| CACTAACTCCCTTCACTTGT+GGG | + | chr1.2:75074078-75074097 | None:intergenic | 45.0% | |
| CAGTTTGCCACCAATCACAT+AGG | - | chr1.2:75071572-75071591 | MS.gene34137:intron | 45.0% | |
| CATGGCATCAAGTTTAGCAG+AGG | + | chr1.2:75071208-75071227 | None:intergenic | 45.0% | |
| CCACATACCTATGTGATTGG+TGG | + | chr1.2:75071582-75071601 | None:intergenic | 45.0% | |
| CCACCAATCACATAGGTATG+TGG | - | chr1.2:75071579-75071598 | MS.gene34137:intron | 45.0% | |
| CCATCATGATCAGGAAGATG+GGG | - | chr1.2:75072870-75072889 | MS.gene34137:CDS | 45.0% | |
| CCTTGAGATGCTTTGTAAGC+TGG | + | chr1.2:75072137-75072156 | None:intergenic | 45.0% | |
| CCTTTCTCCTGAAAATCGGA+GGG | + | chr1.2:75070542-75070561 | None:intergenic | 45.0% | |
| CGACATAACAGTGCAGTGAA+CGG | - | chr1.2:75072946-75072965 | MS.gene34137:CDS | 45.0% | |
| CGTTCACTGCACTGTTATGT+CGG | + | chr1.2:75072948-75072967 | None:intergenic | 45.0% | |
| CTCCATCATGATCAGGAAGA+TGG | - | chr1.2:75072868-75072887 | MS.gene34137:CDS | 45.0% | |
| CTCTGCTAAACTTGATGCCA+TGG | - | chr1.2:75071206-75071225 | MS.gene34137:intron | 45.0% | |
| GACCCCTTTCTCCTGAAAAT+CGG | + | chr1.2:75070546-75070565 | None:intergenic | 45.0% | |
| GAGATGCTTTGTAAGCTGGT+TGG | + | chr1.2:75072133-75072152 | None:intergenic | 45.0% | |
| GGATATTGCACGATCCAAGT+TGG | + | chr1.2:75070681-75070700 | None:intergenic | 45.0% | |
| TCACTGCCATTGTTACTGGT+TGG | - | chr1.2:75069983-75070002 | MS.gene34137:CDS | 45.0% | |
| TGGTATTGCGGAGGCTAAAT+TGG | + | chr1.2:75070505-75070524 | None:intergenic | 45.0% | |
| ! | CCAATTGTTGTTGGGTCTAG+CGG | - | chr1.2:75073779-75073798 | MS.gene34137:intron | 45.0% |
| ! | CCAGCTTACAAAGCATCTCA+AGG | - | chr1.2:75072134-75072153 | MS.gene34137:intron | 45.0% |
| ! | CTGCGATTCTCTTTGTTGTG+AGG | + | chr1.2:75073816-75073835 | None:intergenic | 45.0% |
| ! | GTGTTAACCCTCCGATTTTC+AGG | - | chr1.2:75070532-75070551 | MS.gene34137:intron | 45.0% |
| !! | CCTCCGATTTTCAGGAGAAA+GGG | - | chr1.2:75070540-75070559 | MS.gene34137:intron | 45.0% |
| !! | CTCCGATTTTCAGGAGAAAG+GGG | - | chr1.2:75070541-75070560 | MS.gene34137:intron | 45.0% |
| !! | GCATGACCTCTTTGGCTTTA+CGG | - | chr1.2:75072357-75072376 | MS.gene34137:intron | 45.0% |
| !!! | ATAATATTTAAGTTTTTTTT+AGG | + | chr1.2:75073930-75073949 | None:intergenic | 5.0% |
| AAATCAGCGTCCCTTCCATG+TGG | + | chr1.2:75074139-75074158 | None:intergenic | 50.0% | |
| AACAGGCCGTAAAGCCAAAG+AGG | + | chr1.2:75072366-75072385 | None:intergenic | 50.0% | |
| AATCAGCGTCCCTTCCATGT+GGG | + | chr1.2:75074138-75074157 | None:intergenic | 50.0% | |
| AGAAAGGGGTCCTGGTAATC+TGG | - | chr1.2:75070555-75070574 | MS.gene34137:intron | 50.0% | |
| AGCATTGCACCCACAAGTGA+AGG | - | chr1.2:75074066-75074085 | MS.gene34137:intron | 50.0% | |
| CCACAAGTGAAGGGAGTTAG+TGG | - | chr1.2:75074076-75074095 | MS.gene34137:intron | 50.0% | |
| CCACTAACTCCCTTCACTTG+TGG | + | chr1.2:75074079-75074098 | None:intergenic | 50.0% | |
| CCCCATCTTCCTGATCATGA+TGG | + | chr1.2:75072873-75072892 | None:intergenic | 50.0% | |
| CCCTTTCTCCTGAAAATCGG+AGG | + | chr1.2:75070543-75070562 | None:intergenic | 50.0% | |
| CCGCTAGACCCAACAACAAT+TGG | + | chr1.2:75073782-75073801 | None:intergenic | 50.0% | |
| CGCGGTGTCCATGTGATTAT+GGG | - | chr1.2:75071126-75071145 | MS.gene34137:intron | 50.0% | |
| GCAAAACAACCCCACATGGA+AGG | - | chr1.2:75074125-75074144 | MS.gene34137:CDS | 50.0% | |
| GCATTGCACCCACAAGTGAA+GGG | - | chr1.2:75074067-75074086 | MS.gene34137:intron | 50.0% | |
| GGTCTCACTGCCATTGTTAC+TGG | - | chr1.2:75069979-75069998 | MS.gene34137:CDS | 50.0% | |
| GTGTGCAAAACAACCCCACA+TGG | - | chr1.2:75074121-75074140 | MS.gene34137:CDS | 50.0% | |
| TACAGCAGATGGGGTGCATA+TGG | - | chr1.2:75072078-75072097 | MS.gene34137:intron | 50.0% | |
| TCATGATCAGGAAGATGGGG+TGG | - | chr1.2:75072873-75072892 | MS.gene34137:CDS | 50.0% | |
| ! | ACATGGAAGGGACGCTGATT+TGG | - | chr1.2:75074138-75074157 | MS.gene34137:CDS | 50.0% |
| ! | CGATCCAAGTTGGACTCAAG+TGG | + | chr1.2:75070671-75070690 | None:intergenic | 50.0% |
| !! | CCCTCCGATTTTCAGGAGAA+AGG | - | chr1.2:75070539-75070558 | MS.gene34137:intron | 50.0% |
| !! | CTTTGGCTTTACGGCCTGTT+TGG | - | chr1.2:75072366-75072385 | MS.gene34137:intron | 50.0% |
| !! | TTTTCAGGAGAAAGGGGTCC+TGG | - | chr1.2:75070547-75070566 | MS.gene34137:intron | 50.0% |
| ACTCGTGTGCTTGCTTTGCG+CGG | - | chr1.2:75071108-75071127 | MS.gene34137:intron | 55.0% | |
| ATCAGCGTCCCTTCCATGTG+GGG | + | chr1.2:75074137-75074156 | None:intergenic | 55.0% | |
| GCGCGGTGTCCATGTGATTA+TGG | - | chr1.2:75071125-75071144 | MS.gene34137:intron | 55.0% | |
| !! | GTGGTAACAGGAGCATCCAG+CGG | - | chr1.2:75071069-75071088 | MS.gene34137:intron | 55.0% |
| ATGTCGCCTCAGAGGCTCAC+AGG | - | chr1.2:75071895-75071914 | MS.gene34137:intron | 60.0% | |
| TGCGAACCTGTGAGCCTCTG+AGG | + | chr1.2:75071904-75071923 | None:intergenic | 60.0% | |
| !! | ACAGGAGCATCCAGCGGCAT+TGG | - | chr1.2:75071075-75071094 | MS.gene34137:intron | 60.0% |
| AGTCTCAGCGCCAATGCCGC+TGG | + | chr1.2:75071088-75071107 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75069895 | 75074207 | 75069895 | ID=MS.gene34137 |
| chr1.2 | mRNA | 75069895 | 75074207 | 75069895 | ID=MS.gene34137.t1;Parent=MS.gene34137 |
| chr1.2 | exon | 75074102 | 75074207 | 75074102 | ID=MS.gene34137.t1.exon1;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75074102 | 75074207 | 75074102 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75072792 | 75073023 | 75072792 | ID=MS.gene34137.t1.exon2;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75072792 | 75073023 | 75072792 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75072509 | 75072588 | 75072509 | ID=MS.gene34137.t1.exon3;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75072509 | 75072588 | 75072509 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75072135 | 75072288 | 75072135 | ID=MS.gene34137.t1.exon4;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75072135 | 75072288 | 75072135 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75071947 | 75072025 | 75071947 | ID=MS.gene34137.t1.exon5;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75071947 | 75072025 | 75071947 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75071135 | 75071219 | 75071135 | ID=MS.gene34137.t1.exon6;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75071135 | 75071219 | 75071135 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75070630 | 75070676 | 75070630 | ID=MS.gene34137.t1.exon7;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75070630 | 75070676 | 75070630 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| chr1.2 | exon | 75069895 | 75070059 | 75069895 | ID=MS.gene34137.t1.exon8;Parent=MS.gene34137.t1 |
| chr1.2 | CDS | 75069895 | 75070059 | 75069895 | ID=cds.MS.gene34137.t1;Parent=MS.gene34137.t1 |
| Gene Sequence |
| Protein sequence |
