Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065064.t1 | XP_013470262.1 | 96.6 | 298 | 10 | 0 | 1 | 298 | 1 | 298 | 7.20E-160 | 573.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065064.t1 | Q9SEZ6 | 70.9 | 292 | 84 | 1 | 7 | 298 | 6 | 296 | 1.0e-122 | 441.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065064.t1 | A0A072W210 | 96.6 | 298 | 10 | 0 | 1 | 298 | 1 | 298 | 5.2e-160 | 573.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049382 | MS.gene065064 | 0.814998 | 1.16E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene065064 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene065064 | 0.802095 | 6.60E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene065064 | 0.80397 | 2.70E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene065064 | 0.803493 | 3.40E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene065064 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene065064 | 0.818952 | 1.50E-52 | -1.69E-46 |
| MS.gene050586 | MS.gene065064 | 0.839075 | 1.97E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene065064 | 0.840667 | 7.58E-58 | -1.69E-46 |
| MS.gene050721 | MS.gene065064 | 0.839497 | 1.53E-57 | -1.69E-46 |
| MS.gene050724 | MS.gene065064 | 0.840642 | 7.69E-58 | -1.69E-46 |
| MS.gene050762 | MS.gene065064 | 0.812449 | 4.22E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene065064 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene065064 | 0.810396 | 1.18E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene065064 | 0.816536 | 5.26E-52 | -1.69E-46 |
| MS.gene051789 | MS.gene065064 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene065064 | 0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene065064 | 0.847553 | 1.08E-59 | -1.69E-46 |
| MS.gene052856 | MS.gene065064 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene065064 | 0.809567 | 1.78E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene065064 | 0.80434 | 2.26E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene065064 | 0.832513 | 9.06E-56 | -1.69E-46 |
| MS.gene053630 | MS.gene065064 | 0.831753 | 1.40E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene065064 | 0.803691 | 3.09E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene065064 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene054185 | MS.gene065064 | 0.823245 | 1.54E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene065064 | 0.80406 | 2.59E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene065064 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene065064 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene065064 | -0.831821 | 1.34E-55 | -1.69E-46 |
| MS.gene056432 | MS.gene065064 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene065064 | 0.804322 | 2.28E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene065064 | 0.820283 | 7.44E-53 | -1.69E-46 |
| MS.gene057140 | MS.gene065064 | 0.802631 | 5.12E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene065064 | 0.837006 | 6.70E-57 | -1.69E-46 |
| MS.gene058084 | MS.gene065064 | 0.807478 | 4.96E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene065064 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene058182 | MS.gene065064 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene065064 | 0.816178 | 6.32E-52 | -1.69E-46 |
| MS.gene058906 | MS.gene065064 | 0.836827 | 7.45E-57 | -1.69E-46 |
| MS.gene058982 | MS.gene065064 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene065064 | 0.803437 | 3.49E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene065064 | 0.80793 | 3.97E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene065064 | 0.808466 | 3.05E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene065064 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene065064 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene065064 | 0.820418 | 6.93E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045765 | MS.gene065064 | PPI |
| MS.gene066552 | MS.gene065064 | PPI |
| MS.gene000365 | MS.gene065064 | PPI |
| MS.gene78156 | MS.gene065064 | PPI |
| MS.gene41343 | MS.gene065064 | PPI |
| MS.gene065064 | MS.gene43369 | PPI |
| MS.gene53708 | MS.gene065064 | PPI |
| MS.gene071261 | MS.gene065064 | PPI |
| MS.gene066551 | MS.gene065064 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065064.t1 | MTR_1g111980 | 97.315 | 298 | 8 | 0 | 1 | 298 | 1 | 298 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065064.t1 | AT2G25100 | 71.331 | 293 | 83 | 1 | 6 | 298 | 5 | 296 | 3.59e-165 | 461 |
| MS.gene065064.t1 | AT2G25100 | 66.212 | 293 | 79 | 2 | 6 | 298 | 5 | 277 | 2.92e-148 | 417 |
Find 73 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGAAATTAAACAATT+TGG | 0.119349 | 1.2:+82874867 | MS.gene065064:CDS |
| CTGCCATGGGCCTCGTTGAT+AGG | 0.233916 | 1.2:+82872615 | MS.gene065064:CDS |
| TGTTTACTTCTTGAGCATTT+TGG | 0.237684 | 1.2:-82872467 | None:intergenic |
| TTGAAAGCCAATGATTCTAT+TGG | 0.257884 | 1.2:+82872406 | MS.gene065064:CDS |
| CGTTGATAGGGTGCTCAAAA+TGG | 0.268094 | 1.2:+82872628 | MS.gene065064:CDS |
| GATCACAAACATTCTATCTT+TGG | 0.271558 | 1.2:+82873306 | MS.gene065064:CDS |
| GCAACCACAAATTTGATAGA+TGG | 0.310246 | 1.2:-82872936 | None:intergenic |
| TATTTCTTCGCTTCTCCTCT+TGG | 0.315790 | 1.2:-82874902 | None:intergenic |
| CAATTGAAATTAAACAATTT+GGG | 0.333217 | 1.2:+82874868 | MS.gene065064:CDS |
| GGCATCGGAGGGTTGCATAA+TGG | 0.340560 | 1.2:+82871317 | MS.gene065064:CDS |
| CAAGTGGTAAAGGGCGTTCT+AGG | 0.341183 | 1.2:+82874929 | MS.gene065064:CDS |
| AACATTAGTCAGGTTTAGTT+GGG | 0.344847 | 1.2:+82873335 | MS.gene065064:CDS |
| GTCCTTGGTCCTATGGTCTA+TGG | 0.350982 | 1.2:+82871366 | MS.gene065064:CDS |
| CAAATTTGTGGTTGCAAAGA+AGG | 0.351422 | 1.2:+82872944 | MS.gene065064:CDS |
| TCTAGCCAAGACTTGGTTGC+AGG | 0.363522 | 1.2:-82873282 | None:intergenic |
| GCATCGGAGGGTTGCATAAT+GGG | 0.375113 | 1.2:+82871318 | MS.gene065064:CDS |
| ATCTGAAGCTGCTATGGTTC+CGG | 0.379212 | 1.2:+82871290 | MS.gene065064:CDS |
| AGCTGCTATGGTTCCGGAAT+GGG | 0.380956 | 1.2:+82871296 | MS.gene065064:CDS |
| CAACATTAGTCAGGTTTAGT+TGG | 0.397868 | 1.2:+82873334 | MS.gene065064:CDS |
| ATTGATACAGTTGGAGATCC+AGG | 0.399985 | 1.2:+82872882 | MS.gene065064:CDS |
| CAACCCTCCGATGCCCATTC+CGG | 0.402068 | 1.2:-82871309 | None:intergenic |
| GGTGGCAGCAATAATAATAA+TGG | 0.411127 | 1.2:+82874838 | MS.gene065064:CDS |
| GATAACATTCACAGGAACTT+TGG | 0.418465 | 1.2:+82873141 | MS.gene065064:CDS |
| CAACTAAACCTGACTAATGT+TGG | 0.422536 | 1.2:-82873333 | None:intergenic |
| AGGTCCTGTCCTTGGTCCTA+TGG | 0.426005 | 1.2:+82871359 | MS.gene065064:CDS |
| GAGATCGAGCTATAAGAGAT+TGG | 0.427593 | 1.2:+82873100 | MS.gene065064:CDS |
| AGCCCATCCAATAGAATCAT+TGG | 0.430568 | 1.2:-82872413 | None:intergenic |
| GAAATAGAATCAAGTGGTAA+AGG | 0.437381 | 1.2:+82874919 | MS.gene065064:CDS |
| CAGGTTTATATTGATACAGT+TGG | 0.452563 | 1.2:+82872873 | MS.gene065064:intron |
| TTCGCTTCTCCTCTTGGATG+TGG | 0.454880 | 1.2:-82874896 | None:intergenic |
| AAGGTGGCACTGAAGTCTTA+TGG | 0.459123 | 1.2:+82873379 | MS.gene065064:CDS |
| GTGATCTTCTAGCCAAGACT+TGG | 0.469330 | 1.2:-82873289 | None:intergenic |
| AAATAGAATCAAGTGGTAAA+GGG | 0.471476 | 1.2:+82874920 | MS.gene065064:CDS |
| TGCCATGGGCCTCGTTGATA+GGG | 0.471507 | 1.2:+82872616 | MS.gene065064:CDS |
| GTTGATAGGGTGCTCAAAAT+GGG | 0.472159 | 1.2:+82872629 | MS.gene065064:CDS |
| ATACTTGCACCACTGACAAC+AGG | 0.477284 | 1.2:-82872981 | None:intergenic |
| AACTTTGGCTCTGGATATCC+CGG | 0.481184 | 1.2:+82873156 | MS.gene065064:CDS |
| GCTGGAAGAGGTCCTGTCCT+TGG | 0.487213 | 1.2:+82871351 | MS.gene065064:CDS |
| AATGGGATCTGAAGCTGCTA+TGG | 0.497249 | 1.2:+82871284 | None:intergenic |
| AGCTTCGCTTCATATTTCCC+TGG | 0.499923 | 1.2:-82872900 | None:intergenic |
| ATTCACAGGAACTTTGGCTC+TGG | 0.501553 | 1.2:+82873147 | MS.gene065064:CDS |
| GGTTCCGGAATGGGCATCGG+AGG | 0.503038 | 1.2:+82871305 | MS.gene065064:CDS |
| AGATCGAGCTATAAGAGATT+GGG | 0.506461 | 1.2:+82873101 | MS.gene065064:CDS |
| GACACTAAAAGAAGAGAAGA+GGG | 0.517003 | 1.2:+82872366 | MS.gene065064:CDS |
| TAGATCCTGCAACCAAGTCT+TGG | 0.525753 | 1.2:+82873277 | MS.gene065064:intron |
| AAGCTGCTATGGTTCCGGAA+TGG | 0.527575 | 1.2:+82871295 | MS.gene065064:CDS |
| AAGCCAATGATTCTATTGGA+TGG | 0.528501 | 1.2:+82872410 | MS.gene065064:CDS |
| TGCGAAACTCAAAGTAGCTA+AGG | 0.529377 | 1.2:-82871421 | None:intergenic |
| TATGGTTCCGGAATGGGCAT+CGG | 0.560760 | 1.2:+82871302 | MS.gene065064:CDS |
| TTAGCTACTTTGAGTTTCGC+AGG | 0.563355 | 1.2:+82871423 | MS.gene065064:CDS |
| GGAATCGACGAAGCTGGAAG+AGG | 0.571188 | 1.2:+82871339 | MS.gene065064:CDS |
| AGTCTGCTGATAACATTCAC+AGG | 0.575679 | 1.2:+82873133 | MS.gene065064:CDS |
| GTTCCGGAATGGGCATCGGA+GGG | 0.576240 | 1.2:+82871306 | MS.gene065064:CDS |
| AGACACTAAAAGAAGAGAAG+AGG | 0.576756 | 1.2:+82872365 | MS.gene065064:CDS |
| TGGTGCAAGTATAGTTGCAA+AGG | 0.593002 | 1.2:+82872992 | MS.gene065064:CDS |
| TTGATACAGTTGGAGATCCA+GGG | 0.597039 | 1.2:+82872883 | MS.gene065064:CDS |
| CACCCTATCAACGAGGCCCA+TGG | 0.597149 | 1.2:-82872618 | None:intergenic |
| AGCCAATGATTCTATTGGAT+GGG | 0.597314 | 1.2:+82872411 | MS.gene065064:CDS |
| GATATCACATGACTCTGCCA+TGG | 0.604388 | 1.2:+82872601 | MS.gene065064:CDS |
| TATAAACAACCATAGACCAT+AGG | 0.606448 | 1.2:-82871375 | None:intergenic |
| AGTCTTTATCCTGTTGTCAG+TGG | 0.607604 | 1.2:+82872972 | MS.gene065064:CDS |
| TGTTGATGTCATTGACCCAA+AGG | 0.610587 | 1.2:+82872435 | MS.gene065064:CDS |
| ATATCACATGACTCTGCCAT+GGG | 0.613919 | 1.2:+82872602 | MS.gene065064:CDS |
| ACATTAGTCAGGTTTAGTTG+GGG | 0.616439 | 1.2:+82873336 | MS.gene065064:CDS |
| GCAATAATAATAATGGCAAG+AGG | 0.617191 | 1.2:+82874845 | MS.gene065064:CDS |
| GAGTCTGACTTGGATGAAGA+TGG | 0.620122 | 1.2:+82874817 | MS.gene065064:CDS |
| AGCGAAGAAATAGAATCAAG+TGG | 0.622154 | 1.2:+82874913 | MS.gene065064:CDS |
| ATAATGGGAATCGACGAAGC+TGG | 0.629515 | 1.2:+82871333 | MS.gene065064:CDS |
| TAGACCATAGGACCAAGGAC+AGG | 0.637946 | 1.2:-82871363 | None:intergenic |
| TGGGTTTCACCACATCCAAG+AGG | 0.671053 | 1.2:+82874887 | MS.gene065064:CDS |
| AACCATAGACCATAGGACCA+AGG | 0.685457 | 1.2:-82871368 | None:intergenic |
| TTTGGCTCTGGATATCCCGG+AGG | 0.726118 | 1.2:+82873159 | MS.gene065064:CDS |
| TCTGACTTGGATGAAGATGG+TGG | 0.731629 | 1.2:+82874820 | MS.gene065064:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAGAATTATAATTAAAAA+TGG | - | chr1.2:82871516-82871535 | None:intergenic | 10.0% |
| !! | TTCTAATTAAAATTGAAAAT+AGG | + | chr1.2:82873633-82873652 | MS.gene065064:intron | 10.0% |
| !! | AAATATAACCAAATAAATAG+TGG | - | chr1.2:82871641-82871660 | None:intergenic | 15.0% |
| !! | ATTAAATTCCATTATGTATA+TGG | + | chr1.2:82874694-82874713 | MS.gene065064:intron | 15.0% |
| !! | CAATTGAAATTAAACAATTT+GGG | + | chr1.2:82874868-82874887 | MS.gene065064:CDS | 15.0% |
| !! | TTAAATTCCATTATGTATAT+GGG | + | chr1.2:82874695-82874714 | MS.gene065064:intron | 15.0% |
| !!! | CATTTTAGTTACAATAAATA+TGG | + | chr1.2:82873237-82873256 | MS.gene065064:intron | 15.0% |
| !! | AAAAAAAAAGCAAAACCAAA+AGG | - | chr1.2:82872506-82872525 | None:intergenic | 20.0% |
| !! | AATTATTGCCACTATTTATT+TGG | + | chr1.2:82871630-82871649 | MS.gene065064:intron | 20.0% |
| !! | AGATGTGAAATGTATAATTT+GGG | + | chr1.2:82872845-82872864 | MS.gene065064:intron | 20.0% |
| !! | ATGAGAAATATATTGTTTGT+GGG | - | chr1.2:82874657-82874676 | None:intergenic | 20.0% |
| !! | CTACTATCATTAATTCATTA+TGG | - | chr1.2:82872258-82872277 | None:intergenic | 20.0% |
| !! | CTTATTTATCTGTTAAAACT+TGG | + | chr1.2:82874781-82874800 | MS.gene065064:intron | 20.0% |
| !! | GCAATTGAAATTAAACAATT+TGG | + | chr1.2:82874867-82874886 | MS.gene065064:CDS | 20.0% |
| !! | TAAATTCCATTATGTATATG+GGG | + | chr1.2:82874696-82874715 | MS.gene065064:intron | 20.0% |
| !! | TCATTTGATAAGTATTAAGT+AGG | + | chr1.2:82874437-82874456 | MS.gene065064:intron | 20.0% |
| !! | TTTAAAGAATCCAAAACTAA+TGG | - | chr1.2:82871551-82871570 | None:intergenic | 20.0% |
| !!! | AAAACTTGGACTTTTTTATA+GGG | + | chr1.2:82874795-82874814 | MS.gene065064:intron | 20.0% |
| !!! | AGAAAGGTATATTAATTTTC+AGG | + | chr1.2:82874222-82874241 | MS.gene065064:intron | 20.0% |
| !!! | CAATAAATATGGTTATGTTT+TGG | + | chr1.2:82873248-82873267 | MS.gene065064:intron | 20.0% |
| !!! | CTTTCTTTTCAATTTAATGA+TGG | + | chr1.2:82872532-82872551 | MS.gene065064:intron | 20.0% |
| !!! | TAAAACTTGGACTTTTTTAT+AGG | + | chr1.2:82874794-82874813 | MS.gene065064:intron | 20.0% |
| !!! | TAATGAGTTGGATAAAAATA+TGG | + | chr1.2:82872097-82872116 | MS.gene065064:intron | 20.0% |
| !!! | TATTTGAAACTTTTGTTTCT+GGG | + | chr1.2:82874101-82874120 | MS.gene065064:intron | 20.0% |
| !!! | TTATTTGAAACTTTTGTTTC+TGG | + | chr1.2:82874100-82874119 | MS.gene065064:intron | 20.0% |
| !!! | TTGATTTGATATTGTTATTC+TGG | - | chr1.2:82873996-82874015 | None:intergenic | 20.0% |
| !!! | TTTTCCCAACATATTTTAAT+GGG | + | chr1.2:82872675-82872694 | MS.gene065064:intron | 20.0% |
| ! | AAATAGAATCAAGTGGTAAA+GGG | + | chr1.2:82874920-82874939 | MS.gene065064:CDS | 25.0% |
| ! | AACTAGAATCATTATCAGAA+AGG | + | chr1.2:82874206-82874225 | MS.gene065064:intron | 25.0% |
| ! | AATTCCAAAAATTACAAACG+TGG | - | chr1.2:82874027-82874046 | None:intergenic | 25.0% |
| ! | ACTGAAAACAAACTCAAATA+AGG | - | chr1.2:82873529-82873548 | None:intergenic | 25.0% |
| ! | AGAAATGTACACTTATGTAT+AGG | + | chr1.2:82872294-82872313 | MS.gene065064:intron | 25.0% |
| ! | ATATTTCTCATGAAAGATGA+AGG | + | chr1.2:82874666-82874685 | MS.gene065064:intron | 25.0% |
| ! | ATTCCAAAAATTACAAACGT+GGG | - | chr1.2:82874026-82874045 | None:intergenic | 25.0% |
| ! | CATGAGAAATATATTGTTTG+TGG | - | chr1.2:82874658-82874677 | None:intergenic | 25.0% |
| ! | CATTAAAATATGTTGGGAAA+AGG | - | chr1.2:82872676-82872695 | None:intergenic | 25.0% |
| ! | CTATAACATATCAACTATCA+AGG | - | chr1.2:82874305-82874324 | None:intergenic | 25.0% |
| ! | GAGATGTGAAATGTATAATT+TGG | + | chr1.2:82872844-82872863 | MS.gene065064:intron | 25.0% |
| ! | TAACACTTGGAACATAAAAA+TGG | - | chr1.2:82874744-82874763 | None:intergenic | 25.0% |
| ! | TAATTAAAAATGGAAAGCTC+TGG | - | chr1.2:82871506-82871525 | None:intergenic | 25.0% |
| ! | TCTTCCCATTAAAATATGTT+GGG | - | chr1.2:82872682-82872701 | None:intergenic | 25.0% |
| ! | TGAGAAATATATTGTTTGTG+GGG | - | chr1.2:82874656-82874675 | None:intergenic | 25.0% |
| ! | TTCCTGTTAAAATTACATCA+AGG | - | chr1.2:82872563-82872582 | None:intergenic | 25.0% |
| ! | TTCTTCCCATTAAAATATGT+TGG | - | chr1.2:82872683-82872702 | None:intergenic | 25.0% |
| !! | AATGATTCTAGTTACTTAAG+TGG | - | chr1.2:82874199-82874218 | None:intergenic | 25.0% |
| !! | ATGATTCTAGTTACTTAAGT+GGG | - | chr1.2:82874198-82874217 | None:intergenic | 25.0% |
| !! | CTTGATAGTTGATATGTTAT+AGG | + | chr1.2:82874303-82874322 | MS.gene065064:intron | 25.0% |
| !! | TCAGTTTTCAAAACATTTTC+TGG | + | chr1.2:82873544-82873563 | MS.gene065064:intron | 25.0% |
| !! | TTTTCCATCTATCAAATTTG+TGG | + | chr1.2:82872932-82872951 | MS.gene065064:CDS | 25.0% |
| !! | TTTTTCACTTCCTTAGTTTA+CGG | + | chr1.2:82873950-82873969 | MS.gene065064:intron | 25.0% |
| !!! | CTTTTCCCAACATATTTTAA+TGG | + | chr1.2:82872674-82872693 | MS.gene065064:intron | 25.0% |
| !!! | GTTTGGTTTCATAACATTTT+CGG | + | chr1.2:82873468-82873487 | MS.gene065064:intron | 25.0% |
| !!! | TAATGCTAATCCATTAGTTT+TGG | + | chr1.2:82871538-82871557 | MS.gene065064:intron | 25.0% |
| !!! | TTCCTTGATGTAATTTTAAC+AGG | + | chr1.2:82872558-82872577 | MS.gene065064:intron | 25.0% |
| !!! | TTCTTTAAAATATGCGTGTT+TGG | + | chr1.2:82871562-82871581 | MS.gene065064:intron | 25.0% |
| !!! | TTGTTTTCTAAGGATTTGTT+TGG | + | chr1.2:82873451-82873470 | MS.gene065064:intron | 25.0% |
| !!! | TTTGGTTTCATAACATTTTC+GGG | + | chr1.2:82873469-82873488 | MS.gene065064:intron | 25.0% |
| AAAAATTACAAACGTGGGAT+TGG | - | chr1.2:82874021-82874040 | None:intergenic | 30.0% | |
| AAATATATTGTTTGTGGGGT+GGG | - | chr1.2:82874652-82874671 | None:intergenic | 30.0% | |
| AAATCCTTAGAAAACAAGTG+CGG | - | chr1.2:82873448-82873467 | None:intergenic | 30.0% | |
| AACATGAAGTTAGTGGAATT+TGG | - | chr1.2:82874163-82874182 | None:intergenic | 30.0% | |
| AACATTAGTCAGGTTTAGTT+GGG | + | chr1.2:82873335-82873354 | MS.gene065064:CDS | 30.0% | |
| AAGGTGGTATTTACTATAAC+TGG | - | chr1.2:82873510-82873529 | None:intergenic | 30.0% | |
| AATGAAAACAGAAACCAAAG+AGG | + | chr1.2:82873670-82873689 | MS.gene065064:intron | 30.0% | |
| ACCTATATTAGAAAAGATGG+TGG | + | chr1.2:82871937-82871956 | MS.gene065064:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr1.2:82872085-82872104 | MS.gene065064:intron | 30.0% | |
| AGCACCTATATTAGAAAAGA+TGG | + | chr1.2:82871934-82871953 | MS.gene065064:intron | 30.0% | |
| ATATGTGTTAAGACTAGAAG+CGG | + | chr1.2:82871889-82871908 | MS.gene065064:intron | 30.0% | |
| ATCTTTCAAAGTTACTTGTG+AGG | + | chr1.2:82874400-82874419 | MS.gene065064:intron | 30.0% | |
| ATTAATGTTGACATACTGCT+AGG | + | chr1.2:82873819-82873838 | MS.gene065064:intron | 30.0% | |
| ATTGGATAACATGAAGTTAG+TGG | - | chr1.2:82874170-82874189 | None:intergenic | 30.0% | |
| CAAACGATACACATAGAAAT+AGG | + | chr1.2:82871664-82871683 | MS.gene065064:intron | 30.0% | |
| CAGGTTTATATTGATACAGT+TGG | + | chr1.2:82872873-82872892 | MS.gene065064:intron | 30.0% | |
| CTGAACAGAACAGTATAAAA+AGG | - | chr1.2:82873708-82873727 | None:intergenic | 30.0% | |
| CTTATCCCACTAAATAGAAT+CGG | - | chr1.2:82872162-82872181 | None:intergenic | 30.0% | |
| GAAAACAAACTCAAATAAGG+TGG | - | chr1.2:82873526-82873545 | None:intergenic | 30.0% | |
| GAAATAGAATCAAGTGGTAA+AGG | + | chr1.2:82874919-82874938 | MS.gene065064:CDS | 30.0% | |
| GATCACAAACATTCTATCTT+TGG | + | chr1.2:82873306-82873325 | MS.gene065064:CDS | 30.0% | |
| GCAATAATAATAATGGCAAG+AGG | + | chr1.2:82874845-82874864 | MS.gene065064:CDS | 30.0% | |
| GCAGTATGTCAACATTAATA+TGG | - | chr1.2:82873818-82873837 | None:intergenic | 30.0% | |
| GTGTAAGGGGAAAAATTTAT+CGG | + | chr1.2:82871775-82871794 | MS.gene065064:intron | 30.0% | |
| TAAACCATCAAATTCAAGCT+GGG | + | chr1.2:82871696-82871715 | MS.gene065064:intron | 30.0% | |
| TACGCTTCTTATAAGTACTT+GGG | + | chr1.2:82872788-82872807 | MS.gene065064:intron | 30.0% | |
| TATAAACAACCATAGACCAT+AGG | - | chr1.2:82871378-82871397 | None:intergenic | 30.0% | |
| TTGAAAGCCAATGATTCTAT+TGG | + | chr1.2:82872406-82872425 | MS.gene065064:CDS | 30.0% | |
| TTTCCTTTGTTGACAACAAA+AGG | - | chr1.2:82874487-82874506 | None:intergenic | 30.0% | |
| ! | AAAGTACTACTCAAGTGTAA+GGG | + | chr1.2:82871761-82871780 | MS.gene065064:intron | 30.0% |
| ! | AACCTTTAATCCAACCTTTT+AGG | + | chr1.2:82873071-82873090 | MS.gene065064:intron | 30.0% |
| ! | AATCCCACGTTTGTAATTTT+TGG | + | chr1.2:82874020-82874039 | MS.gene065064:intron | 30.0% |
| ! | AGTTTTCCCCATATACATAA+TGG | - | chr1.2:82874705-82874724 | None:intergenic | 30.0% |
| ! | ATCCATACGACATATTTTGT+TGG | - | chr1.2:82872765-82872784 | None:intergenic | 30.0% |
| ! | TCCACCATCTTTTCTAATAT+AGG | - | chr1.2:82871941-82871960 | None:intergenic | 30.0% |
| ! | TGATTCTAGTTACTTAAGTG+GGG | - | chr1.2:82874197-82874216 | None:intergenic | 30.0% |
| ! | TGGTATATGATAGAGCATTA+TGG | + | chr1.2:82872117-82872136 | MS.gene065064:intron | 30.0% |
| ! | TGTTTACTTCTTGAGCATTT+TGG | - | chr1.2:82872470-82872489 | None:intergenic | 30.0% |
| ! | TTTTCACTTCCTTAGTTTAC+GGG | + | chr1.2:82873951-82873970 | MS.gene065064:intron | 30.0% |
| !! | AAAAAAGTGACTTGTTTCTG+TGG | - | chr1.2:82874376-82874395 | None:intergenic | 30.0% |
| !! | AAAGGCACTGCAAAAAATAT+AGG | - | chr1.2:82874469-82874488 | None:intergenic | 30.0% |
| !!! | ACTTGCAGCTCTTATTTTAA+AGG | + | chr1.2:82873360-82873379 | MS.gene065064:CDS | 30.0% |
| !!! | TCAAAGTAGCTAAGGTTTTT+TGG | - | chr1.2:82871416-82871435 | None:intergenic | 30.0% |
| AAAGCTGTAGGTATTATGCT+TGG | + | chr1.2:82874560-82874579 | MS.gene065064:intron | 35.0% | |
| AAGCAAAACCAAAAGGACTA+AGG | - | chr1.2:82872499-82872518 | None:intergenic | 35.0% | |
| AAGCCAATGATTCTATTGGA+TGG | + | chr1.2:82872410-82872429 | MS.gene065064:CDS | 35.0% | |
| AAGGAGAGTAGATCAAATGA+AGG | + | chr1.2:82872014-82872033 | MS.gene065064:intron | 35.0% | |
| AAGTACTACTCAAGTGTAAG+GGG | + | chr1.2:82871762-82871781 | MS.gene065064:intron | 35.0% | |
| AATATATTGTTTGTGGGGTG+GGG | - | chr1.2:82874651-82874670 | None:intergenic | 35.0% | |
| ACATTAGTCAGGTTTAGTTG+GGG | + | chr1.2:82873336-82873355 | MS.gene065064:CDS | 35.0% | |
| AGACACTAAAAGAAGAGAAG+AGG | + | chr1.2:82872365-82872384 | MS.gene065064:CDS | 35.0% | |
| AGACTCGTAGATTTGTACTA+AGG | + | chr1.2:82871995-82872014 | MS.gene065064:intron | 35.0% | |
| AGATCGAGCTATAAGAGATT+GGG | + | chr1.2:82873101-82873120 | MS.gene065064:CDS | 35.0% | |
| AGCCAATGATTCTATTGGAT+GGG | + | chr1.2:82872411-82872430 | MS.gene065064:CDS | 35.0% | |
| AGCGAAGAAATAGAATCAAG+TGG | + | chr1.2:82874913-82874932 | MS.gene065064:CDS | 35.0% | |
| AGTGAAATAGTCCTTGAGAA+AGG | + | chr1.2:82874276-82874295 | MS.gene065064:intron | 35.0% | |
| ATGTATAATTTGGGCTCTTC+AGG | + | chr1.2:82872854-82872873 | MS.gene065064:intron | 35.0% | |
| CAAAGTTTGTAAGAGAAGAC+TGG | - | chr1.2:82874599-82874618 | None:intergenic | 35.0% | |
| CAAATTTGTGGTTGCAAAGA+AGG | + | chr1.2:82872944-82872963 | MS.gene065064:CDS | 35.0% | |
| CAACATTAGTCAGGTTTAGT+TGG | + | chr1.2:82873334-82873353 | MS.gene065064:CDS | 35.0% | |
| CAACTAAACCTGACTAATGT+TGG | - | chr1.2:82873336-82873355 | None:intergenic | 35.0% | |
| CAGAGATAAGAATGTTGCAT+TGG | + | chr1.2:82871866-82871885 | MS.gene065064:intron | 35.0% | |
| CGATTCTATTTAGTGGGATA+AGG | + | chr1.2:82872160-82872179 | MS.gene065064:intron | 35.0% | |
| GAAATATATTGTTTGTGGGG+TGG | - | chr1.2:82874653-82874672 | None:intergenic | 35.0% | |
| GAAGTTAAGAGAAAGAGAGT+AGG | - | chr1.2:82871451-82871470 | None:intergenic | 35.0% | |
| GACACTAAAAGAAGAGAAGA+GGG | + | chr1.2:82872366-82872385 | MS.gene065064:CDS | 35.0% | |
| GACCTAAAAGGTTGGATTAA+AGG | - | chr1.2:82873076-82873095 | None:intergenic | 35.0% | |
| GATAACATTCACAGGAACTT+TGG | + | chr1.2:82873141-82873160 | MS.gene065064:CDS | 35.0% | |
| GCAACCACAAATTTGATAGA+TGG | - | chr1.2:82872939-82872958 | None:intergenic | 35.0% | |
| GGTGGCAGCAATAATAATAA+TGG | + | chr1.2:82874838-82874857 | MS.gene065064:CDS | 35.0% | |
| GTAAACCATCAAATTCAAGC+TGG | + | chr1.2:82871695-82871714 | MS.gene065064:intron | 35.0% | |
| GTACGCTTCTTATAAGTACT+TGG | + | chr1.2:82872787-82872806 | MS.gene065064:intron | 35.0% | |
| GTTGTGAAAATAGCACAAGT+TGG | - | chr1.2:82874332-82874351 | None:intergenic | 35.0% | |
| TATCAAGGATACCTTTCTCA+AGG | - | chr1.2:82874290-82874309 | None:intergenic | 35.0% | |
| TCAATAATCCTGAAAGCTGT+AGG | + | chr1.2:82874548-82874567 | MS.gene065064:intron | 35.0% | |
| TGCCAACAAAATATGTCGTA+TGG | + | chr1.2:82872760-82872779 | MS.gene065064:intron | 35.0% | |
| TGTCACATATGCATCTTTGT+TGG | + | chr1.2:82872331-82872350 | MS.gene065064:intron | 35.0% | |
| TTAGTGCAGGAAATTCTACA+CGG | - | chr1.2:82873030-82873049 | None:intergenic | 35.0% | |
| TTGAAGCATGAACAATGCAT+GGG | + | chr1.2:82874622-82874641 | MS.gene065064:intron | 35.0% | |
| TTTGTTTGCCATACTTTCCA+CGG | + | chr1.2:82873745-82873764 | MS.gene065064:intron | 35.0% | |
| ! | ATGTAGCCGATTCTATTTAG+TGG | + | chr1.2:82872153-82872172 | MS.gene065064:intron | 35.0% |
| ! | ATTCTAGTTACTTAAGTGGG+GGG | - | chr1.2:82874195-82874214 | None:intergenic | 35.0% |
| ! | GATTCTAGTTACTTAAGTGG+GGG | - | chr1.2:82874196-82874215 | None:intergenic | 35.0% |
| ! | TGTAGCCGATTCTATTTAGT+GGG | + | chr1.2:82872154-82872173 | MS.gene065064:intron | 35.0% |
| ! | TTTTTATAGGGAGTCTGACT+TGG | + | chr1.2:82874807-82874826 | MS.gene065064:intron | 35.0% |
| !! | AATTACTTTTACAGCCCAAG+AGG | - | chr1.2:82874054-82874073 | None:intergenic | 35.0% |
| !! | GAAAGTACTACTCAAGTGTA+AGG | + | chr1.2:82871760-82871779 | MS.gene065064:intron | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | + | chr1.2:82871945-82871964 | MS.gene065064:intron | 35.0% |
| !! | TATACCGCACTTGTTTTCTA+AGG | + | chr1.2:82873441-82873460 | MS.gene065064:intron | 35.0% |
| !! | TTGGTTTTCCAACATTAGTC+AGG | + | chr1.2:82873325-82873344 | MS.gene065064:CDS | 35.0% |
| !!! | AGTAGCTAAGGTTTTTTGGT+AGG | - | chr1.2:82871412-82871431 | None:intergenic | 35.0% |
| !!! | TGCAGCTCTTATTTTAAAGG+TGG | + | chr1.2:82873363-82873382 | MS.gene065064:CDS | 35.0% |
| !!! | TTTTGGAATTTGCTCCTCTT+GGG | + | chr1.2:82874037-82874056 | MS.gene065064:intron | 35.0% |
| !!! | TTTTTGGAATTTGCTCCTCT+TGG | + | chr1.2:82874036-82874055 | MS.gene065064:intron | 35.0% |
| AAGGATAGTCAGATCACTAG+AGG | + | chr1.2:82872033-82872052 | MS.gene065064:intron | 40.0% | |
| AAGGTTGGATTAAAGGTTGC+AGG | - | chr1.2:82873069-82873088 | None:intergenic | 40.0% | |
| AATGTTGTATGGGACAGTGT+TGG | + | chr1.2:82871806-82871825 | MS.gene065064:intron | 40.0% | |
| ACGGTAAAACTTCTTAGTGC+AGG | - | chr1.2:82873043-82873062 | None:intergenic | 40.0% | |
| ACTGTCCCATACAACATTGT+TGG | - | chr1.2:82871804-82871823 | None:intergenic | 40.0% | |
| AGCAGTTAAGCTGCTTATGA+TGG | - | chr1.2:82873857-82873876 | None:intergenic | 40.0% | |
| AGCCCATCCAATAGAATCAT+TGG | - | chr1.2:82872416-82872435 | None:intergenic | 40.0% | |
| AGTCTGCTGATAACATTCAC+AGG | + | chr1.2:82873133-82873152 | MS.gene065064:CDS | 40.0% | |
| AGTCTTTATCCTGTTGTCAG+TGG | + | chr1.2:82872972-82872991 | MS.gene065064:CDS | 40.0% | |
| ATATATTGTTTGTGGGGTGG+GGG | - | chr1.2:82874650-82874669 | None:intergenic | 40.0% | |
| ATATCACATGACTCTGCCAT+GGG | + | chr1.2:82872602-82872621 | MS.gene065064:CDS | 40.0% | |
| ATCTTGAAGCCCGTAAACTA+AGG | - | chr1.2:82873963-82873982 | None:intergenic | 40.0% | |
| ATGTTGTATGGGACAGTGTT+GGG | + | chr1.2:82871807-82871826 | MS.gene065064:intron | 40.0% | |
| ATTGATACAGTTGGAGATCC+AGG | + | chr1.2:82872882-82872901 | MS.gene065064:CDS | 40.0% | |
| CTTGAAGCATGAACAATGCA+TGG | + | chr1.2:82874621-82874640 | MS.gene065064:intron | 40.0% | |
| GAGATCGAGCTATAAGAGAT+TGG | + | chr1.2:82873100-82873119 | MS.gene065064:CDS | 40.0% | |
| GATTAAAGGTTGCAGGTAGA+CGG | - | chr1.2:82873062-82873081 | None:intergenic | 40.0% | |
| GCATAATACCTACAGCTTTC+AGG | - | chr1.2:82874559-82874578 | None:intergenic | 40.0% | |
| GGAGACCAACAATGTTGTAT+GGG | + | chr1.2:82871796-82871815 | MS.gene065064:intron | 40.0% | |
| GTATACAGTCACAGAATGCA+TGG | - | chr1.2:82873426-82873445 | None:intergenic | 40.0% | |
| TAGTGCAGGAAATTCTACAC+GGG | - | chr1.2:82873029-82873048 | None:intergenic | 40.0% | |
| TATTTCTTCGCTTCTCCTCT+TGG | - | chr1.2:82874905-82874924 | None:intergenic | 40.0% | |
| TCGATCTCTTGTGACCTAAA+AGG | - | chr1.2:82873088-82873107 | None:intergenic | 40.0% | |
| TCTCTTGTGACCTAAAAGGT+TGG | - | chr1.2:82873084-82873103 | None:intergenic | 40.0% | |
| TGCGAAACTCAAAGTAGCTA+AGG | - | chr1.2:82871424-82871443 | None:intergenic | 40.0% | |
| TGGTGCAAGTATAGTTGCAA+AGG | + | chr1.2:82872992-82873011 | MS.gene065064:CDS | 40.0% | |
| TGTTGATGTCATTGACCCAA+AGG | + | chr1.2:82872435-82872454 | MS.gene065064:CDS | 40.0% | |
| TTACTTAAGTGGGGGGAAAT+TGG | - | chr1.2:82874188-82874207 | None:intergenic | 40.0% | |
| TTGATACAGTTGGAGATCCA+GGG | + | chr1.2:82872883-82872902 | MS.gene065064:CDS | 40.0% | |
| ! | AAAATGGAAAGCTCTGGCAA+TGG | - | chr1.2:82871500-82871519 | None:intergenic | 40.0% |
| ! | ATCTGAAGTCATGTTAGAGC+TGG | - | chr1.2:82872712-82872731 | None:intergenic | 40.0% |
| ! | CAAACAGACCTTAGTCCTTT+TGG | + | chr1.2:82872488-82872507 | MS.gene065064:intron | 40.0% |
| ! | GTTGATAGGGTGCTCAAAAT+GGG | + | chr1.2:82872629-82872648 | MS.gene065064:CDS | 40.0% |
| ! | TCTGAAGTCATGTTAGAGCT+GGG | - | chr1.2:82872711-82872730 | None:intergenic | 40.0% |
| ! | TTAGCTACTTTGAGTTTCGC+AGG | + | chr1.2:82871423-82871442 | MS.gene065064:CDS | 40.0% |
| ! | TTTTGGCAGAGAGTTCCTTT+GGG | - | chr1.2:82872453-82872472 | None:intergenic | 40.0% |
| !! | AGATGGTGGAAACTAGGATT+AGG | + | chr1.2:82871951-82871970 | MS.gene065064:intron | 40.0% |
| !! | ATTTTGGCAGAGAGTTCCTT+TGG | - | chr1.2:82872454-82872473 | None:intergenic | 40.0% |
| !! | GTGCCTTTTGTTGTCAACAA+AGG | + | chr1.2:82874481-82874500 | MS.gene065064:intron | 40.0% |
| !! | TATGTAGCATTGACACAGAC+AGG | - | chr1.2:82872221-82872240 | None:intergenic | 40.0% |
| !!! | AAGGTTTTTTGGTAGGAGAG+AGG | - | chr1.2:82871405-82871424 | None:intergenic | 40.0% |
| !!! | AATGGGAGTGCTTTTAACTG+AGG | + | chr1.2:82872646-82872665 | MS.gene065064:CDS | 40.0% |
| !!! | GTTCTAGGTTTTTTCAGGCT+CGG | + | chr1.2:82874944-82874963 | MS.gene065064:CDS | 40.0% |
| AAATTCTACACGGGAGAGTG+AGG | - | chr1.2:82873020-82873039 | None:intergenic | 45.0% | |
| AACCATAGACCATAGGACCA+AGG | - | chr1.2:82871371-82871390 | None:intergenic | 45.0% | |
| ACCATCAAATTCAAGCTGGG+AGG | + | chr1.2:82871699-82871718 | MS.gene065064:intron | 45.0% | |
| ACCTCCCAGCTTGAATTTGA+TGG | - | chr1.2:82871703-82871722 | None:intergenic | 45.0% | |
| AGCTTCGCTTCATATTTCCC+TGG | - | chr1.2:82872903-82872922 | None:intergenic | 45.0% | |
| AGTCATGTTAGAGCTGGGAA+AGG | - | chr1.2:82872706-82872725 | None:intergenic | 45.0% | |
| ATACTTGCACCACTGACAAC+AGG | - | chr1.2:82872984-82873003 | None:intergenic | 45.0% | |
| CAAACACACCGTGGAAAGTA+TGG | - | chr1.2:82873756-82873775 | None:intergenic | 45.0% | |
| CGGACATCAAAGAGAGAGTT+CGG | + | chr1.2:82871909-82871928 | MS.gene065064:intron | 45.0% | |
| CGGAGACCAACAATGTTGTA+TGG | + | chr1.2:82871795-82871814 | MS.gene065064:intron | 45.0% | |
| GATATCACATGACTCTGCCA+TGG | + | chr1.2:82872601-82872620 | MS.gene065064:CDS | 45.0% | |
| GGACATCAAAGAGAGAGTTC+GGG | + | chr1.2:82871910-82871929 | MS.gene065064:intron | 45.0% | |
| GTGATCTTCTAGCCAAGACT+TGG | - | chr1.2:82873292-82873311 | None:intergenic | 45.0% | |
| TAGATCCTGCAACCAAGTCT+TGG | + | chr1.2:82873277-82873296 | MS.gene065064:intron | 45.0% | |
| TATATTGTTTGTGGGGTGGG+GGG | - | chr1.2:82874649-82874668 | None:intergenic | 45.0% | |
| TGGTGGAAACTAGGATTAGG+TGG | + | chr1.2:82871954-82871973 | MS.gene065064:intron | 45.0% | |
| TGTGTTTGAACTAGGCTGGT+AGG | + | chr1.2:82873768-82873787 | MS.gene065064:intron | 45.0% | |
| TGTTCCAAGTGTTACGTGCT+AGG | + | chr1.2:82874750-82874769 | MS.gene065064:intron | 45.0% | |
| TTCAAGCTGGGAGGTTGAAA+TGG | + | chr1.2:82871708-82871727 | MS.gene065064:intron | 45.0% | |
| TTCCACGGTGTGTTTGAACT+AGG | + | chr1.2:82873760-82873779 | MS.gene065064:intron | 45.0% | |
| ! | AAGGTGGCACTGAAGTCTTA+TGG | + | chr1.2:82873379-82873398 | MS.gene065064:CDS | 45.0% |
| ! | ATAATGGGAATCGACGAAGC+TGG | + | chr1.2:82871333-82871352 | MS.gene065064:CDS | 45.0% |
| ! | ATCTGAAGCTGCTATGGTTC+CGG | + | chr1.2:82871290-82871309 | MS.gene065064:CDS | 45.0% |
| ! | ATTCACAGGAACTTTGGCTC+TGG | + | chr1.2:82873147-82873166 | MS.gene065064:CDS | 45.0% |
| ! | CGTTGATAGGGTGCTCAAAA+TGG | + | chr1.2:82872628-82872647 | MS.gene065064:CDS | 45.0% |
| ! | GTTTCTGTGGTGCTAAGATC+AGG | - | chr1.2:82874363-82874382 | None:intergenic | 45.0% |
| ! | TTTTGAGCACCCTATCAACG+AGG | - | chr1.2:82872628-82872647 | None:intergenic | 45.0% |
| !! | AACTTTGGCTCTGGATATCC+CGG | + | chr1.2:82873156-82873175 | MS.gene065064:CDS | 45.0% |
| !! | GAGTCTGACTTGGATGAAGA+TGG | + | chr1.2:82874817-82874836 | MS.gene065064:CDS | 45.0% |
| !! | TCTGACTTGGATGAAGATGG+TGG | + | chr1.2:82874820-82874839 | MS.gene065064:CDS | 45.0% |
| !! | TGCGTGTTTGGTGTCTGAAA+CGG | + | chr1.2:82871574-82871593 | MS.gene065064:intron | 45.0% |
| !!! | AGGGCGTTCTAGGTTTTTTC+AGG | + | chr1.2:82874939-82874958 | MS.gene065064:CDS | 45.0% |
| !! | AAATTAAATAAAAGAATAAA+TGG | - | chr1.2:82873927-82873946 | None:intergenic | 5.0% |
| AACGCCTAGCACGTAACACT+TGG | - | chr1.2:82874757-82874776 | None:intergenic | 50.0% | |
| AAGCTGCTATGGTTCCGGAA+TGG | + | chr1.2:82871295-82871314 | MS.gene065064:CDS | 50.0% | |
| AAGCTGGGAGGTTGAAATGG+TGG | + | chr1.2:82871711-82871730 | MS.gene065064:intron | 50.0% | |
| ACGGTGTGTTTGAACTAGGC+TGG | + | chr1.2:82873764-82873783 | MS.gene065064:intron | 50.0% | |
| ACTAGAGGCAGAGGAGGATT+AGG | + | chr1.2:82872048-82872067 | MS.gene065064:intron | 50.0% | |
| AGCCTAGTTCAAACACACCG+TGG | - | chr1.2:82873765-82873784 | None:intergenic | 50.0% | |
| AGCTGCTATGGTTCCGGAAT+GGG | + | chr1.2:82871296-82871315 | MS.gene065064:CDS | 50.0% | |
| AGTCAGATCACTAGAGGCAG+AGG | + | chr1.2:82872039-82872058 | MS.gene065064:intron | 50.0% | |
| AGTCATGACCTACTCACCTC+CGG | - | chr1.2:82873178-82873197 | None:intergenic | 50.0% | |
| GCATCGGAGGGTTGCATAAT+GGG | + | chr1.2:82871318-82871337 | MS.gene065064:CDS | 50.0% | |
| GGAAAAACGCAGAGCCTCTT+TGG | - | chr1.2:82873687-82873706 | None:intergenic | 50.0% | |
| GTCCTTGGTCCTATGGTCTA+TGG | + | chr1.2:82871366-82871385 | MS.gene065064:CDS | 50.0% | |
| TAGACCATAGGACCAAGGAC+AGG | - | chr1.2:82871366-82871385 | None:intergenic | 50.0% | |
| TATGGTTCCGGAATGGGCAT+CGG | + | chr1.2:82871302-82871321 | MS.gene065064:CDS | 50.0% | |
| TGGGTTTCACCACATCCAAG+AGG | + | chr1.2:82874887-82874906 | MS.gene065064:CDS | 50.0% | |
| TTCGCTTCTCCTCTTGGATG+TGG | - | chr1.2:82874899-82874918 | None:intergenic | 50.0% | |
| ! | TCTAGCCAAGACTTGGTTGC+AGG | - | chr1.2:82873285-82873304 | None:intergenic | 50.0% |
| !! | CAAGTGGTAAAGGGCGTTCT+AGG | + | chr1.2:82874929-82874948 | MS.gene065064:CDS | 50.0% |
| AGGTCCTGTCCTTGGTCCTA+TGG | + | chr1.2:82871359-82871378 | MS.gene065064:CDS | 55.0% | |
| CAGATCACTAGAGGCAGAGG+AGG | + | chr1.2:82872042-82872061 | MS.gene065064:intron | 55.0% | |
| GGAATCGACGAAGCTGGAAG+AGG | + | chr1.2:82871339-82871358 | MS.gene065064:CDS | 55.0% | |
| GTCATGACCTACTCACCTCC+GGG | - | chr1.2:82873177-82873196 | None:intergenic | 55.0% | |
| TGCCATGGGCCTCGTTGATA+GGG | + | chr1.2:82872616-82872635 | MS.gene065064:CDS | 55.0% | |
| TGGATATCCCGGAGGTGAGT+AGG | + | chr1.2:82873167-82873186 | MS.gene065064:intron | 55.0% | |
| ! | GGCATCGGAGGGTTGCATAA+TGG | + | chr1.2:82871317-82871336 | MS.gene065064:CDS | 55.0% |
| !! | TTTGGCTCTGGATATCCCGG+AGG | + | chr1.2:82873159-82873178 | MS.gene065064:CDS | 55.0% |
| CAACCCTCCGATGCCCATTC+CGG | - | chr1.2:82871312-82871331 | None:intergenic | 60.0% | |
| CACCCTATCAACGAGGCCCA+TGG | - | chr1.2:82872621-82872640 | None:intergenic | 60.0% | |
| CTGCCATGGGCCTCGTTGAT+AGG | + | chr1.2:82872615-82872634 | MS.gene065064:CDS | 60.0% | |
| GCTGGAAGAGGTCCTGTCCT+TGG | + | chr1.2:82871351-82871370 | MS.gene065064:CDS | 60.0% | |
| !! | GTTCCGGAATGGGCATCGGA+GGG | + | chr1.2:82871306-82871325 | MS.gene065064:CDS | 60.0% |
| !! | GGTTCCGGAATGGGCATCGG+AGG | + | chr1.2:82871305-82871324 | MS.gene065064:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 82871285 | 82874993 | 82871285 | ID=MS.gene065064 |
| chr1.2 | mRNA | 82871285 | 82874993 | 82871285 | ID=MS.gene065064.t1;Parent=MS.gene065064 |
| chr1.2 | exon | 82871285 | 82871444 | 82871285 | ID=MS.gene065064.t1.exon1;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82871285 | 82871444 | 82871285 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82872359 | 82872482 | 82872359 | ID=MS.gene065064.t1.exon2;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82872359 | 82872482 | 82872359 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82872580 | 82872667 | 82872580 | ID=MS.gene065064.t1.exon3;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82872580 | 82872667 | 82872580 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82872876 | 82873013 | 82872876 | ID=MS.gene065064.t1.exon4;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82872876 | 82873013 | 82872876 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82873093 | 82873180 | 82873093 | ID=MS.gene065064.t1.exon5;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82873093 | 82873180 | 82873093 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82873280 | 82873400 | 82873280 | ID=MS.gene065064.t1.exon6;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82873280 | 82873400 | 82873280 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| chr1.2 | exon | 82874816 | 82874993 | 82874816 | ID=MS.gene065064.t1.exon7;Parent=MS.gene065064.t1 |
| chr1.2 | CDS | 82874816 | 82874993 | 82874816 | ID=cds.MS.gene065064.t1;Parent=MS.gene065064.t1 |
| Gene Sequence |
| Protein sequence |
