AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06738

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06738.t1 MTR_3g009190 94.609 371 20 0 1 371 17 387 0.0 711
MS.gene06738.t1 MTR_3g009190 94.851 369 19 0 3 371 1 369 0.0 709
MS.gene06738.t1 MTR_6g453040 93.372 347 23 0 25 371 1 347 0.0 657
MS.gene06738.t1 MTR_3g091070 90.643 342 14 1 25 366 1 324 0.0 621
MS.gene06738.t1 MTR_3g009190 93.464 306 20 0 66 371 63 368 0.0 575
MS.gene06738.t1 MTR_6g453040 90.175 285 24 1 3 287 1 281 0.0 513
MS.gene06738.t1 MTR_6g453040 94.628 242 13 0 3 244 1 242 4.00e-165 462
MS.gene06738.t1 MTR_3g009200 79.006 181 26 3 104 281 2 173 3.00e-95 282
MS.gene06738.t1 MTR_6g453030 88.312 77 9 0 94 170 1 77 2.94e-42 142
MS.gene06738.t1 MTR_4g105310 29.605 304 191 7 62 359 46 332 2.40e-29 116
MS.gene06738.t1 MTR_3g077410 30.263 304 189 9 62 359 35 321 1.00e-27 111
MS.gene06738.t1 MTR_8g099995 29.139 302 193 7 68 363 39 325 5.57e-25 104
MS.gene06738.t1 MTR_8g098415 31.250 304 173 10 67 358 32 311 9.29e-25 103
MS.gene06738.t1 MTR_8g098415 31.169 308 170 11 67 359 32 312 1.20e-24 102
MS.gene06738.t1 MTR_7g099850 27.687 307 187 9 67 361 37 320 6.77e-24 100
MS.gene06738.t1 MTR_4g105310 30.973 226 139 5 62 283 46 258 1.13e-23 99.4
MS.gene06738.t1 MTR_1g068970 27.303 304 191 9 67 361 37 319 1.27e-22 97.4
MS.gene06738.t1 MTR_1g100315 28.525 305 182 10 67 359 32 312 5.94e-22 95.5
MS.gene06738.t1 MTR_1g100395 27.778 306 185 9 67 360 32 313 1.05e-21 94.7
MS.gene06738.t1 MTR_1g100305 29.545 308 175 10 67 359 32 312 1.38e-21 94.4
MS.gene06738.t1 MTR_1g100335 28.525 305 182 11 67 359 32 312 3.18e-20 90.5
MS.gene06738.t1 MTR_8g098415 30.859 256 141 10 115 358 23 254 1.03e-19 87.8
MS.gene06738.t1 MTR_6g041980 26.908 249 163 8 9 247 8 247 8.04e-19 85.5
MS.gene06738.t1 MTR_6g053550 28.896 308 180 12 67 359 40 323 1.02e-18 86.3
MS.gene06738.t1 MTR_6g041980 25.449 334 204 12 9 329 8 309 1.93e-18 85.9
MS.gene06738.t1 MTR_1g068970 26.172 256 165 8 112 361 15 252 1.31e-16 79.3
MS.gene06738.t1 MTR_1g100335 29.646 226 136 7 67 285 32 241 6.88e-16 77.4
MS.gene06738.t1 MTR_1g100335 29.646 226 136 7 67 285 32 241 1.24e-15 76.6
MS.gene06738.t1 MTR_6g081020 26.074 349 206 14 38 359 34 357 7.25e-15 75.5
MS.gene06738.t1 MTR_2g079710 28.701 331 201 11 55 359 75 396 2.09e-14 74.3
MS.gene06738.t1 MTR_8g098415 31.156 199 116 5 67 258 32 216 2.77e-14 71.6
MS.gene06738.t1 MTR_6g053600 28.854 253 141 10 67 301 26 257 1.87e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06738.t1 AT5G04070 57.307 349 147 1 7 355 1 347 9.63e-131 379
MS.gene06738.t1 AT5G15940 55.337 356 158 1 6 360 1 356 5.47e-128 372
MS.gene06738.t1 AT5G15940 55.337 356 158 1 6 360 1 356 5.47e-128 372
MS.gene06738.t1 AT5G15940 55.493 355 157 1 7 360 1 355 1.10e-127 371
MS.gene06738.t1 AT5G15940 54.259 317 144 1 6 321 1 317 1.23e-107 318
MS.gene06738.t1 AT2G37540 30.743 296 175 10 67 353 36 310 1.29e-25 105
MS.gene06738.t1 AT4G23430 31.126 302 177 9 67 358 32 312 2.25e-25 105
MS.gene06738.t1 AT4G23430 30.693 303 175 10 67 358 32 310 9.36e-25 103
MS.gene06738.t1 AT2G37540 33.333 228 135 6 67 290 36 250 4.33e-24 100
MS.gene06738.t1 AT4G24050 31.707 246 137 7 67 300 37 263 1.25e-23 99.4
MS.gene06738.t1 AT4G24050 31.837 245 136 7 68 300 38 263 3.93e-23 99.0
MS.gene06738.t1 AT5G02540 29.097 299 188 8 74 366 43 323 1.48e-22 97.4
MS.gene06738.t1 AT5G50130 27.946 297 191 8 69 359 8 287 1.51e-22 97.1
MS.gene06738.t1 AT4G23420 29.508 305 178 12 67 358 32 312 2.68e-22 96.3
MS.gene06738.t1 AT4G23420 29.508 305 178 12 67 358 32 312 2.68e-22 96.3
MS.gene06738.t1 AT4G23420 29.508 305 178 12 67 358 49 329 4.15e-22 96.3
MS.gene06738.t1 AT4G09750 29.520 271 153 10 67 329 46 286 5.65e-22 95.5
MS.gene06738.t1 AT5G50130 29.412 221 139 5 67 283 39 246 1.09e-21 93.6
MS.gene06738.t1 AT5G50130 28.094 299 191 9 68 359 40 321 1.22e-21 95.1
MS.gene06738.t1 AT5G50130 28.270 237 153 5 68 300 40 263 2.85e-21 93.6
MS.gene06738.t1 AT1G64590 30.962 239 146 6 68 300 38 263 2.98e-21 94.0
MS.gene06738.t1 AT5G50130 27.852 298 191 9 69 359 8 288 3.68e-21 93.2
MS.gene06738.t1 AT5G50130 29.224 219 138 5 69 283 8 213 1.24e-20 91.3
MS.gene06738.t1 AT5G50130 29.279 222 139 6 67 283 39 247 2.46e-20 89.7
MS.gene06738.t1 AT5G50130 28.151 238 153 6 68 300 40 264 6.17e-20 89.7
MS.gene06738.t1 AT4G23420 31.416 226 124 9 67 281 32 237 7.36e-20 88.6
MS.gene06738.t1 AT4G23420 32.432 222 127 7 67 281 32 237 1.45e-19 87.8
MS.gene06738.t1 AT4G11410 28.956 297 181 9 66 353 31 306 2.21e-19 88.2
MS.gene06738.t1 AT5G50130 29.091 220 138 6 69 283 8 214 3.05e-19 87.4
MS.gene06738.t1 AT4G23430 28.859 298 179 9 67 358 32 302 1.37e-18 85.9
MS.gene06738.t1 AT4G23430 28.428 299 177 10 67 358 32 300 3.98e-18 84.3
MS.gene06738.t1 AT5G54190 27.586 319 192 12 68 359 96 402 2.20e-16 80.5
MS.gene06738.t1 AT4G11410 29.412 221 139 5 67 283 32 239 2.66e-16 78.6
MS.gene06738.t1 AT5G53090 31.641 256 145 11 38 286 37 269 1.06e-15 78.2
MS.gene06738.t1 AT4G27760 31.890 254 144 12 40 285 37 269 3.53e-15 76.6
MS.gene06738.t1 AT5G61830 26.613 248 136 6 66 279 38 273 1.67e-14 73.9
MS.gene06738.t1 AT5G61830 26.613 248 136 6 66 279 38 273 1.67e-14 73.9
MS.gene06738.t1 AT5G53100 28.254 315 192 11 63 359 43 341 2.00e-14 74.3
MS.gene06738.t1 AT1G03630 27.329 322 196 12 64 359 89 398 3.19e-13 70.9
MS.gene06738.t1 AT1G03630 27.329 322 196 12 64 359 87 396 3.37e-13 70.9
MS.gene06738.t1 AT4G27440 28.814 236 140 7 68 284 92 318 2.34e-12 68.2
MS.gene06738.t1 AT4G27440 28.814 236 140 7 68 284 92 318 2.34e-12 68.2
MS.gene06738.t1 AT5G51030 26.295 251 141 11 61 279 34 272 4.22e-11 63.9

Find 82 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGTTACATTAACAATTT+TGG 0.129013 3.3:+76025121 None:intergenic
TTCTCATTACCAATTGTTTA+AGG 0.132723 3.3:-76026807 MS.gene06738:CDS
CCAAAGCTCACGAGCTAATT+TGG 0.165614 3.3:+76022672 None:intergenic
TTCCCTGCGGCAGTGGCTTT+TGG 0.188298 3.3:-76025751 MS.gene06738:CDS
GAAGGATATGTTGTTGTTAT+TGG 0.221951 3.3:-76026570 MS.gene06738:intron
ATGACGCAAACGGGCTTATT+AGG 0.256187 3.3:+76026728 None:intergenic
CCAAATTAGCTCGTGAGCTT+TGG 0.294441 3.3:-76022672 MS.gene06738:CDS
CCAACCTTTGATCTTTGTTA+TGG 0.302323 3.3:+76025845 None:intergenic
GGGAATGATCAATTTGATAA+AGG 0.302626 3.3:-76026909 MS.gene06738:CDS
GTTGATGAGGGAACTGTATC+TGG 0.316956 3.3:-76024919 MS.gene06738:CDS
ATGTAGGCAACTTCTGGCTT+GGG 0.349440 3.3:-76026621 MS.gene06738:intron
ACTGAAGCGCCTACGCCTAT+TGG 0.350236 3.3:-76023566 MS.gene06738:CDS
CAAATTAGCTCGTGAGCTTT+GGG 0.351969 3.3:-76022671 MS.gene06738:CDS
TACTGCATGCAAGCTTTCTA+AGG 0.358613 3.3:-76026592 MS.gene06738:CDS
AACAAGAGCGGCATCAATAA+TGG 0.358851 3.3:+76023519 None:intergenic
GCCACCCAAGACAGGCTTGC+TGG 0.372458 3.3:+76023598 None:intergenic
TATGTAGGCAACTTCTGGCT+TGG 0.389201 3.3:-76026622 MS.gene06738:intron
AGAAGCTTGGTCATAACAAA+TGG 0.391340 3.3:+76025176 None:intergenic
TGCATCAGTGTTGCAGATCC+TGG 0.392661 3.3:-76023652 MS.gene06738:intron
CTCAATTCAATTCTTGAGAA+TGG 0.399695 3.3:-76026858 MS.gene06738:CDS
TACTCATAGATCTGAGCATA+TGG 0.415666 3.3:+76024868 None:intergenic
AGTGCGAATCCTTAAACAAT+TGG 0.431135 3.3:+76026798 None:intergenic
TTCTTCAGTTACTAATATGC+AGG 0.447497 3.3:-76024941 MS.gene06738:intron
ATGATCGGCACAAATTATAT+CGG 0.464816 3.3:-76025200 MS.gene06738:CDS
ACGCCGGTGATGACGCAAAC+GGG 0.466622 3.3:+76026719 None:intergenic
CGCACTCAGAGGATTCCAAT+AGG 0.477071 3.3:+76023551 None:intergenic
AAGTTCCAGCAAGCCTGTCT+TGG 0.478894 3.3:-76023603 MS.gene06738:CDS
TTGTTTCCCTTATTACCAAA+GGG 0.479422 3.3:+76022619 None:intergenic
CACCGACAGCTTTGCCAGAT+GGG 0.480702 3.3:-76024724 MS.gene06738:CDS
AATCCAAAAGCCACTGCCGC+AGG 0.480743 3.3:+76025748 None:intergenic
TCTTGAGAATGGCGTTGCTA+TGG 0.482908 3.3:-76026847 MS.gene06738:CDS
ATGTTTGTTTGTACAACTCC+AGG 0.484002 3.3:+76023634 None:intergenic
AACGGGCTTATTAGGATAAG+TGG 0.486333 3.3:+76026736 None:intergenic
AGTTCCAGCAAGCCTGTCTT+GGG 0.486423 3.3:-76023602 MS.gene06738:CDS
TCTGATGAGATTTACCCATC+TGG 0.490381 3.3:+76024710 None:intergenic
ATGAGAAAATGCAACAGAAA+AGG 0.493406 3.3:+76026823 None:intergenic
TACGCCGGTGATGACGCAAA+CGG 0.502981 3.3:+76026718 None:intergenic
ATTGTTTCCCTTATTACCAA+AGG 0.508720 3.3:+76022618 None:intergenic
TAGCCCTCGGCTGTGACTCT+AGG 0.508982 3.3:+76025666 None:intergenic
ACTCTTTCTCCCAGGATGAT+CGG 0.513630 3.3:-76025215 MS.gene06738:intron
GGATTCCGATTTGCACTGCT+CGG 0.516338 3.3:-76025730 MS.gene06738:CDS
TACTAATATGCAGGTTGATG+AGG 0.517745 3.3:-76024932 MS.gene06738:CDS
CTGTACCGAGCAGTGCAAAT+CGG 0.519892 3.3:+76025725 None:intergenic
CCACCGACAGCTTTGCCAGA+TGG 0.523592 3.3:-76024725 MS.gene06738:CDS
CAAAGAATGCCACCCAAGAC+AGG 0.524956 3.3:+76023590 None:intergenic
CAGATACTAATAAACAATGC+TGG 0.527707 3.3:-76025705 MS.gene06738:CDS
TCAGTACTTCCCTGCGGCAG+TGG 0.529421 3.3:-76025758 MS.gene06738:CDS
AAGAAGTGGTAATAGAAGCT+TGG 0.533171 3.3:+76025163 None:intergenic
CAGCCTGAAAAGCTTTGAGA+TGG 0.536724 3.3:+76025811 None:intergenic
ACAAAATCGTTTCATATCCA+AGG 0.536777 3.3:-76026769 MS.gene06738:CDS
GAAGCTTGGTCATAACAAAT+GGG 0.550505 3.3:+76025177 None:intergenic
TATTGGAATCCTCTGAGTGC+GGG 0.558043 3.3:-76023549 MS.gene06738:CDS
AACTACATCCAATTTGCTAT+CGG 0.558311 3.3:-76022647 MS.gene06738:CDS
ACAGGACTGCTTTCAAGAAG+TGG 0.566270 3.3:+76025149 None:intergenic
GCATGCAAGCTTTCTAAGGA+AGG 0.570982 3.3:-76026588 MS.gene06738:CDS
ACTAATATGCAGGTTGATGA+GGG 0.578265 3.3:-76024931 MS.gene06738:CDS
TACCCATCTGGCAAAGCTGT+CGG 0.582388 3.3:+76024722 None:intergenic
ATCAGAGCAGTTGTTGTCAG+AGG 0.583512 3.3:-76025958 MS.gene06738:intron
AAGCCCGTTTGCGTCATCAC+CGG 0.588542 3.3:-76026722 MS.gene06738:CDS
ATTTGATAAAGGATTTATCA+CGG 0.588831 3.3:-76026898 MS.gene06738:CDS
AAAGATCAAAGGTTGGAATG+AGG 0.601841 3.3:-76025838 MS.gene06738:CDS
ATCCAAAAGCCACTGCCGCA+GGG 0.603195 3.3:+76025749 None:intergenic
ACATCATTTACTCACCGAGC+TGG 0.604721 3.3:-76025104 MS.gene06738:intron
TCCAGCAAGCCTGTCTTGGG+TGG 0.609392 3.3:-76023599 MS.gene06738:CDS
TGATTACTGATCGTAGCCCT+CGG 0.612315 3.3:+76025653 None:intergenic
CAGAGGATTCCAATAGGCGT+AGG 0.613100 3.3:+76023557 None:intergenic
ATCTCCTAGAGTCACAGCCG+AGG 0.615116 3.3:-76025670 MS.gene06738:CDS
CCATAACAAAGATCAAAGGT+TGG 0.615580 3.3:-76025845 MS.gene06738:CDS
GTTTCCCTTATTACCAAAGG+GGG 0.615866 3.3:+76022621 None:intergenic
AGCCTGAAAAGCTTTGAGAT+GGG 0.618219 3.3:+76025812 None:intergenic
TCAAGAATTGAATTGAGCAG+AGG 0.618735 3.3:+76026864 None:intergenic
CCATCTGGCAAAGCTGTCGG+TGG 0.618971 3.3:+76024725 None:intergenic
TAGACCATAACAAAGATCAA+AGG 0.629385 3.3:-76025849 MS.gene06738:CDS
CTATTGGAATCCTCTGAGTG+CGG 0.632369 3.3:-76023550 MS.gene06738:CDS
AAATGATTATCCTACCAGCT+CGG 0.644742 3.3:+76025090 None:intergenic
TAAGTGGAAGGTGAAGACCT+TGG 0.645367 3.3:+76026752 None:intergenic
ACTCACAGGCGGAACAAGAG+CGG 0.651280 3.3:+76023507 None:intergenic
TCTCCTAGAGTCACAGCCGA+GGG 0.656798 3.3:-76025669 MS.gene06738:CDS
GGAATCATTCCCGCACTCAG+AGG 0.664247 3.3:+76023540 None:intergenic
GGCTTATTAGGATAAGTGGA+AGG 0.667420 3.3:+76026740 None:intergenic
TGTTTCCCTTATTACCAAAG+GGG 0.678642 3.3:+76022620 None:intergenic
TAAAGTTCAGTACTTCCCTG+CGG 0.748172 3.3:-76025764 MS.gene06738:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAACCTATATTTATAAA+AGG + chr3.3:76025202-76025221 None:intergenic 10.0%
!! AATAACCTATATTTATAAAA+GGG + chr3.3:76025201-76025220 None:intergenic 10.0%
!! ATAAAACTTTATTATATTTC+TGG - chr3.3:76025796-76025815 MS.gene06738:CDS 10.0%
!! ACAAAATTCTGAATATTTAT+AGG - chr3.3:76025157-76025176 MS.gene06738:CDS 15.0%
!! ATAAAAGGAATTAAAACATA+AGG + chr3.3:76023026-76023045 None:intergenic 15.0%
!! ATAATATAAATCAAAAAGTG+AGG + chr3.3:76024463-76024482 None:intergenic 15.0%
!! CAAAATTCTGAATATTTATA+GGG - chr3.3:76025158-76025177 MS.gene06738:CDS 15.0%
!!! ATTAACCCTTTTATAAATAT+AGG - chr3.3:76025193-76025212 MS.gene06738:CDS 15.0%
!! AACATGAATAAAAATCATAC+GGG - chr3.3:76025718-76025737 MS.gene06738:CDS 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr3.3:76024940-76024959 None:intergenic 20.0%
!! ATAAATAAATTATGCACATC+AGG + chr3.3:76024031-76024050 None:intergenic 20.0%
!! ATCACAGTAATACATTAATT+AGG + chr3.3:76025241-76025260 None:intergenic 20.0%
!! ATTAAGATATTTACGATGAA+TGG + chr3.3:76023633-76023652 None:intergenic 20.0%
!! ATTTGATAAAGGATTTATCA+CGG - chr3.3:76022625-76022644 MS.gene06738:CDS 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr3.3:76024939-76024958 None:intergenic 20.0%
!! CAGAAAATGAATATTAAAAG+TGG + chr3.3:76025843-76025862 None:intergenic 20.0%
!! CATAATTTATTTATGCTTTG+GGG - chr3.3:76024037-76024056 MS.gene06738:intron 20.0%
!! CTAAAATCCTGAATTTATAA+TGG + chr3.3:76026510-76026529 None:intergenic 20.0%
!! GAACATGAATAAAAATCATA+CGG - chr3.3:76025717-76025736 MS.gene06738:CDS 20.0%
!! GCATAATTTATTTATGCTTT+GGG - chr3.3:76024036-76024055 MS.gene06738:intron 20.0%
!! TATATTAATTATTAGCATCG+TGG - chr3.3:76023596-76023615 MS.gene06738:CDS 20.0%
!! TGATTTGACAATTACTAATT+TGG - chr3.3:76026633-76026652 MS.gene06738:intron 20.0%
!! TGCATAATTTATTTATGCTT+TGG - chr3.3:76024035-76024054 MS.gene06738:intron 20.0%
!!! AAAAAATTCACCAACATTTT+TGG + chr3.3:76025031-76025050 None:intergenic 20.0%
!!! AAAACAATGATACACTTTTT+TGG - chr3.3:76026416-76026435 MS.gene06738:intron 20.0%
!!! AAACAATGATACACTTTTTT+GGG - chr3.3:76026417-76026436 MS.gene06738:intron 20.0%
!!! AAAGGAAATAAAAGTTGATT+TGG + chr3.3:76024858-76024877 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr3.3:76024971-76024990 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr3.3:76024970-76024989 None:intergenic 20.0%
!!! ACATTTTCCTTAAGTATTTT+AGG - chr3.3:76025003-76025022 MS.gene06738:intron 20.0%
!!! ATGCTAATGAACAATTTTAT+AGG - chr3.3:76025097-76025116 MS.gene06738:intron 20.0%
!!! CATTTTCCTTAAGTATTTTA+GGG - chr3.3:76025004-76025023 MS.gene06738:intron 20.0%
!!! CCATAATTTGATCAATTTTA+CGG + chr3.3:76023127-76023146 None:intergenic 20.0%
!!! GAAAATCAATAAGTGTTTTA+TGG + chr3.3:76024522-76024541 None:intergenic 20.0%
!!! TATTAACATTTTGAACTCAA+TGG + chr3.3:76026742-76026761 None:intergenic 20.0%
!!! TGATGTTACATTAACAATTT+TGG + chr3.3:76024405-76024424 None:intergenic 20.0%
!!! TGCTAATGAACAATTTTATA+GGG - chr3.3:76025098-76025117 MS.gene06738:intron 20.0%
!!! TTCTATGATTTTTTCTATGT+AGG - chr3.3:76022886-76022905 MS.gene06738:intron 20.0%
! AACAAAAATACATGCTAGTT+AGG + chr3.3:76024746-76024765 None:intergenic 25.0%
! ATCATGTTCAGTTAAAATAG+AGG + chr3.3:76026476-76026495 None:intergenic 25.0%
! ATTGACATAATCACAAGATT+TGG + chr3.3:76023199-76023218 None:intergenic 25.0%
! CAAAATTCTATCTTTATCGT+TGG - chr3.3:76023930-76023949 MS.gene06738:intron 25.0%
! CCGTAAAATTGATCAAATTA+TGG - chr3.3:76023124-76023143 MS.gene06738:intron 25.0%
! GATAAATAACATTGCATCAA+AGG + chr3.3:76024207-76024226 None:intergenic 25.0%
! GTACAGATCAATTATTCAAA+AGG + chr3.3:76026660-76026679 None:intergenic 25.0%
! GTGAATTGTTAGCATATAAA+AGG + chr3.3:76023041-76023060 None:intergenic 25.0%
! TCATGTTCAGTTAAAATAGA+GGG + chr3.3:76026475-76026494 None:intergenic 25.0%
! TCTACTTTGTCAAATTTCTA+CGG - chr3.3:76023350-76023369 MS.gene06738:intron 25.0%
! TTAATGAAATTTGCAAGAGA+AGG + chr3.3:76022845-76022864 None:intergenic 25.0%
! TTATAAAAACACACAACACT+TGG + chr3.3:76024895-76024914 None:intergenic 25.0%
! TTATTATCCAATGAGTTTGA+AGG - chr3.3:76025563-76025582 MS.gene06738:intron 25.0%
! TTCAAACTCATTGGATAATA+AGG + chr3.3:76025564-76025583 None:intergenic 25.0%
! TTCTCATTACCAATTGTTTA+AGG - chr3.3:76022716-76022735 MS.gene06738:CDS 25.0%
!! AAAGCTTAAAACATTTTGCA+AGG + chr3.3:76025772-76025791 None:intergenic 25.0%
!! AATAATTTGTAGGAAAGTCA+TGG + chr3.3:76025297-76025316 None:intergenic 25.0%
!! AGAGCTTTATATAATCACAA+TGG + chr3.3:76023152-76023171 None:intergenic 25.0%
!! GCTGATGGAAAATTTTTATA+GGG - chr3.3:76025067-76025086 MS.gene06738:intron 25.0%
!! TCTTTTGAACACACTATTAT+TGG + chr3.3:76023470-76023489 None:intergenic 25.0%
!! TGCTGATGGAAAATTTTTAT+AGG - chr3.3:76025066-76025085 MS.gene06738:intron 25.0%
!!! AAAGTGCGATTTTATTTTGT+AGG - chr3.3:76025126-76025145 MS.gene06738:CDS 25.0%
!!! AAGTGCGATTTTATTTTGTA+GGG - chr3.3:76025127-76025146 MS.gene06738:CDS 25.0%
!!! AGTGTTGTGTGTTTTTATAA+AGG - chr3.3:76024895-76024914 MS.gene06738:CDS 25.0%
!!! AGTTCTGAACTTTCAATTAA+AGG - chr3.3:76025433-76025452 MS.gene06738:intron 25.0%
!!! ATAAGCGTACATTTTTTTTC+AGG - chr3.3:76026759-76026778 MS.gene06738:CDS 25.0%
!!! ATATTTCTGGTTAATAACCA+TGG - chr3.3:76025809-76025828 MS.gene06738:CDS 25.0%
!!! CTTATTGATTTTCTCTACAA+TGG - chr3.3:76024529-76024548 MS.gene06738:intron 25.0%
!!! GTGTTGTGTGTTTTTATAAA+GGG - chr3.3:76024896-76024915 MS.gene06738:CDS 25.0%
!!! GTTGGTGAATTTTTTTTACA+GGG - chr3.3:76025036-76025055 MS.gene06738:intron 25.0%
!!! TAAGCGTACATTTTTTTTCA+GGG - chr3.3:76026760-76026779 MS.gene06738:CDS 25.0%
!!! TATTTCTGGTTAATAACCAT+GGG - chr3.3:76025810-76025829 MS.gene06738:CDS 25.0%
!!! TGTTGGTGAATTTTTTTTAC+AGG - chr3.3:76025035-76025054 MS.gene06738:intron 25.0%
!!! TTAAATGTCAACTTTTGAGA+TGG - chr3.3:76024079-76024098 MS.gene06738:intron 25.0%
!!! TTAACAATTTTGGAAGATAC+AGG + chr3.3:76024395-76024414 None:intergenic 25.0%
AAACCCAAAGTTACTCTTAT+TGG + chr3.3:76025668-76025687 None:intergenic 30.0%
ACAAAATCGTTTCATATCCA+AGG - chr3.3:76022754-76022773 MS.gene06738:intron 30.0%
AGTGTGTTCAAAAGACTATT+TGG - chr3.3:76023475-76023494 MS.gene06738:intron 30.0%
ATAAAGAATAAGCTCGCAAT+TGG + chr3.3:76026574-76026593 None:intergenic 30.0%
ATACATGCTAGTTAGGAATT+AGG + chr3.3:76024739-76024758 None:intergenic 30.0%
ATACTTAAGGAAAATGTCAC+AGG + chr3.3:76025000-76025019 None:intergenic 30.0%
ATCATGTTCTTTCCATTGTT+TGG - chr3.3:76023651-76023670 MS.gene06738:intron 30.0%
ATGAGAAAATGCAACAGAAA+AGG + chr3.3:76022703-76022722 None:intergenic 30.0%
ATGATCGGCACAAATTATAT+CGG - chr3.3:76024323-76024342 MS.gene06738:intron 30.0%
ATTCATCTTGAACTAACACA+AGG - chr3.3:76026166-76026185 MS.gene06738:intron 30.0%
ATTGTTTCCCTTATTACCAA+AGG + chr3.3:76026908-76026927 None:intergenic 30.0%
CAGAACTATATGAGAATTAC+AGG + chr3.3:76025420-76025439 None:intergenic 30.0%
CAGATACTAATAAACAATGC+TGG - chr3.3:76023818-76023837 MS.gene06738:intron 30.0%
CTATATGAGAATTACAGGTT+TGG + chr3.3:76025415-76025434 None:intergenic 30.0%
CTCAATTCAATTCTTGAGAA+TGG - chr3.3:76022665-76022684 MS.gene06738:CDS 30.0%
GAAAGAGTGGAAAATATAGT+TGG + chr3.3:76024296-76024315 None:intergenic 30.0%
GGATTTCACTCAGAATTAAA+TGG + chr3.3:76023078-76023097 None:intergenic 30.0%
GGGAATGATCAATTTGATAA+AGG - chr3.3:76022614-76022633 MS.gene06738:CDS 30.0%
TAAAGAATAAGCTCGCAATT+GGG + chr3.3:76026573-76026592 None:intergenic 30.0%
TACATGCTAGTTAGGAATTA+GGG + chr3.3:76024738-76024757 None:intergenic 30.0%
TACTTAAGGAAAATGTCACA+GGG + chr3.3:76024999-76025018 None:intergenic 30.0%
TAGACCATAACAAAGATCAA+AGG - chr3.3:76023674-76023693 MS.gene06738:intron 30.0%
TTCTTCAGTTACTAATATGC+AGG - chr3.3:76024582-76024601 MS.gene06738:intron 30.0%
TTGTTTCCCTTATTACCAAA+GGG + chr3.3:76026907-76026926 None:intergenic 30.0%
TTTGGTCCCTAAAATACTTA+AGG + chr3.3:76025013-76025032 None:intergenic 30.0%
! ACCTTTTATTGTGTTATGCA+AGG + chr3.3:76023976-76023995 None:intergenic 30.0%
! CACATTGGATGCATTTTTAT+GGG - chr3.3:76024179-76024198 MS.gene06738:intron 30.0%
! CATTTTTCCTTCAAACTCAT+TGG + chr3.3:76025573-76025592 None:intergenic 30.0%
! CTTGGGAAACAATAATTTGT+AGG + chr3.3:76025307-76025326 None:intergenic 30.0%
! GAAGGATATGTTGTTGTTAT+TGG - chr3.3:76022953-76022972 MS.gene06738:intron 30.0%
!! AACTACATCCAATTTGCTAT+CGG - chr3.3:76026876-76026895 MS.gene06738:CDS 30.0%
!! ATTTTAGGGACCAAAAATGT+TGG - chr3.3:76025018-76025037 MS.gene06738:intron 30.0%
!!! ATTTTTTTTCAGGGAACATC+AGG - chr3.3:76026769-76026788 MS.gene06738:CDS 30.0%
AAAGATCAAAGGTTGGAATG+AGG - chr3.3:76023685-76023704 MS.gene06738:intron 35.0%
AAATGATTATCCTACCAGCT+CGG + chr3.3:76024436-76024455 None:intergenic 35.0%
AAGAAGTGGTAATAGAAGCT+TGG + chr3.3:76024363-76024382 None:intergenic 35.0%
ACAACACTTGGAAAAAAGGA+TGG + chr3.3:76024883-76024902 None:intergenic 35.0%
ACACACAACACTTGGAAAAA+AGG + chr3.3:76024887-76024906 None:intergenic 35.0%
ACTTTCTATTAGTGCATGTC+TGG + chr3.3:76023234-76023253 None:intergenic 35.0%
AGAAGCTTGGTCATAACAAA+TGG + chr3.3:76024350-76024369 None:intergenic 35.0%
AGACATGCACTAATAGAAAG+TGG - chr3.3:76023233-76023252 MS.gene06738:intron 35.0%
AGCACCAATAAGAGTAACTT+TGG - chr3.3:76025661-76025680 MS.gene06738:CDS 35.0%
AGTGCGAATCCTTAAACAAT+TGG + chr3.3:76022728-76022747 None:intergenic 35.0%
ATGTTTGTTTGTACAACTCC+AGG + chr3.3:76025892-76025911 None:intergenic 35.0%
CAATCCATAACAGGAATCTT+AGG + chr3.3:76023532-76023551 None:intergenic 35.0%
CCAACCTTTGATCTTTGTTA+TGG + chr3.3:76023681-76023700 None:intergenic 35.0%
CCATAACAAAGATCAAAGGT+TGG - chr3.3:76023678-76023697 MS.gene06738:intron 35.0%
CGTCTCTCCATTATAAATTC+AGG - chr3.3:76026500-76026519 MS.gene06738:intron 35.0%
CTCTCTTGTTAAGGATACAA+CGG - chr3.3:76025476-76025495 MS.gene06738:intron 35.0%
CTCTTAGTTTCACAAGTTTG+AGG - chr3.3:76026531-76026550 MS.gene06738:intron 35.0%
CTCTTATGAAAACTCACTTG+TGG - chr3.3:76025613-76025632 MS.gene06738:intron 35.0%
CTTACCTAAGATTCCTGTTA+TGG - chr3.3:76023525-76023544 MS.gene06738:CDS 35.0%
CTTTAGTGTTATGTTGTGTC+TGG - chr3.3:76023387-76023406 MS.gene06738:intron 35.0%
GAAGAAAAAAGAACTTACGC+CGG + chr3.3:76022823-76022842 None:intergenic 35.0%
GAAGCTTGGTCATAACAAAT+GGG + chr3.3:76024349-76024368 None:intergenic 35.0%
GCACCAATAAGAGTAACTTT+GGG - chr3.3:76025662-76025681 MS.gene06738:CDS 35.0%
GCCTTGCATAACACAATAAA+AGG - chr3.3:76023972-76023991 MS.gene06738:intron 35.0%
GTAAGAAATATCAGTGATCG+AGG + chr3.3:76026693-76026712 None:intergenic 35.0%
GTTGTATCCTTAACAAGAGA+GGG + chr3.3:76025477-76025496 None:intergenic 35.0%
TACTCATAGATCTGAGCATA+TGG + chr3.3:76024658-76024677 None:intergenic 35.0%
TATCAGTTCCATAAAGTTCC+TGG + chr3.3:76024128-76024147 None:intergenic 35.0%
TCAAGAATTGAATTGAGCAG+AGG + chr3.3:76022662-76022681 None:intergenic 35.0%
TCTGGTGTATGTGTCTATAT+TGG - chr3.3:76023405-76023424 MS.gene06738:intron 35.0%
TGATGTTTCAAAGTGACTGA+AGG - chr3.3:76026091-76026110 MS.gene06738:intron 35.0%
TGTTATGGTCTACCAAACAA+TGG + chr3.3:76023666-76023685 None:intergenic 35.0%
TGTTTCCCTTATTACCAAAG+GGG + chr3.3:76026906-76026925 None:intergenic 35.0%
TTCAAGATGAATTACCGACA+CGG + chr3.3:76026158-76026177 None:intergenic 35.0%
TTGGAAAAAAGGATGGCAAA+AGG + chr3.3:76024876-76024895 None:intergenic 35.0%
TTTAGCAGTACAAAAACACG+AGG + chr3.3:76026359-76026378 None:intergenic 35.0%
! ACAAGGCATTATCTTCAGAT+TGG + chr3.3:76025378-76025397 None:intergenic 35.0%
! GCACATTGGATGCATTTTTA+TGG - chr3.3:76024178-76024197 MS.gene06738:intron 35.0%
! TTTTCTATGTAGGCAACTTC+TGG - chr3.3:76022896-76022915 MS.gene06738:intron 35.0%
!! AATTAGTCTTGAGTCTTGAC+TGG - chr3.3:76026714-76026733 MS.gene06738:intron 35.0%
!! ACTAATATGCAGGTTGATGA+GGG - chr3.3:76024592-76024611 MS.gene06738:intron 35.0%
!! ACTGCTAAAAAAGTACTCAC+AGG + chr3.3:76026033-76026052 None:intergenic 35.0%
!! AGAAGCATTTGTATGCACAT+TGG - chr3.3:76024164-76024183 MS.gene06738:intron 35.0%
!! TACTAATATGCAGGTTGATG+AGG - chr3.3:76024591-76024610 MS.gene06738:intron 35.0%
!!! ACATCAGGAGCTTACTTTTT+TGG - chr3.3:76026784-76026803 MS.gene06738:CDS 35.0%
!!! ATCAGGAGCTTACTTTTTTG+GGG - chr3.3:76026786-76026805 MS.gene06738:CDS 35.0%
!!! CATCAGGAGCTTACTTTTTT+GGG - chr3.3:76026785-76026804 MS.gene06738:CDS 35.0%
AACAAGAGCGGCATCAATAA+TGG + chr3.3:76026007-76026026 None:intergenic 40.0%
AATAAGGTAGCTGTAGCTTC+AGG + chr3.3:76025548-76025567 None:intergenic 40.0%
ACAATCTTTGTCTCCCAACA+AGG - chr3.3:76025509-76025528 MS.gene06738:intron 40.0%
AGAGCTTGAGAAGGTTCTAT+AGG + chr3.3:76024561-76024580 None:intergenic 40.0%
ATAAGGTAGCTGTAGCTTCA+GGG + chr3.3:76025547-76025566 None:intergenic 40.0%
ATTTGCATGACATGATCACC+AGG - chr3.3:76024107-76024126 MS.gene06738:intron 40.0%
CAAATTAGCTCGTGAGCTTT+GGG - chr3.3:76026852-76026871 MS.gene06738:CDS 40.0%
CATGATCACCAGGAACTTTA+TGG - chr3.3:76024117-76024136 MS.gene06738:intron 40.0%
CGTAGGCTAGGTTATTTAGT+GGG - chr3.3:76023438-76023457 MS.gene06738:intron 40.0%
CGTTGTATCCTTAACAAGAG+AGG + chr3.3:76025478-76025497 None:intergenic 40.0%
CTCAGACAGTTAGACAAACA+TGG + chr3.3:76024245-76024264 None:intergenic 40.0%
CTGAAGAAAAGAGCTTGAGA+AGG + chr3.3:76024570-76024589 None:intergenic 40.0%
CTTCTTATCTTCTGTGCTTG+TGG - chr3.3:76023903-76023922 MS.gene06738:intron 40.0%
GACAGTAAAACCCAAAGAGT+AGG + chr3.3:76024497-76024516 None:intergenic 40.0%
GGCTTATTAGGATAAGTGGA+AGG + chr3.3:76022786-76022805 None:intergenic 40.0%
GGTTGTGCAGAAAAGAACTT+GGG + chr3.3:76025324-76025343 None:intergenic 40.0%
GTCTAGTGATCCTACTCTTT+GGG - chr3.3:76024484-76024503 MS.gene06738:intron 40.0%
GTTTCCCTTATTACCAAAGG+GGG + chr3.3:76026905-76026924 None:intergenic 40.0%
TAAAAGTGGAGTAGAACCCA+TGG + chr3.3:76025829-76025848 None:intergenic 40.0%
TAAAGTTCAGTACTTCCCTG+CGG - chr3.3:76023759-76023778 MS.gene06738:intron 40.0%
TACAGGGACTAAAATGCTGA+TGG - chr3.3:76025052-76025071 MS.gene06738:intron 40.0%
TACTGCATGCAAGCTTTCTA+AGG - chr3.3:76022931-76022950 MS.gene06738:intron 40.0%
TATGCATCCCTCTCTTGTTA+AGG - chr3.3:76025467-76025486 MS.gene06738:intron 40.0%
TCTGATGAGATTTACCCATC+TGG + chr3.3:76024816-76024835 None:intergenic 40.0%
TGTCTAGTGATCCTACTCTT+TGG - chr3.3:76024483-76024502 MS.gene06738:intron 40.0%
TTAGTGCATGTCTGGATTGA+TGG + chr3.3:76023226-76023245 None:intergenic 40.0%
! AACGGGCTTATTAGGATAAG+TGG + chr3.3:76022790-76022809 None:intergenic 40.0%
! ATAATTTGTGCCGATCATCC+TGG + chr3.3:76024321-76024340 None:intergenic 40.0%
! ATATTGGTGCTTCATTGCGT+AGG - chr3.3:76023421-76023440 MS.gene06738:intron 40.0%
! CTGTTATGGATTGATGCAGT+GGG - chr3.3:76023539-76023558 MS.gene06738:CDS 40.0%
! TAATTTGTGCCGATCATCCT+GGG + chr3.3:76024320-76024339 None:intergenic 40.0%
! TATTTTCCACTCTTTCTCCC+AGG - chr3.3:76024300-76024319 MS.gene06738:intron 40.0%
!! AGCCTGAAAAGCTTTGAGAT+GGG + chr3.3:76023714-76023733 None:intergenic 40.0%
!! GCTAAAAAAGTACTCACAGG+CGG + chr3.3:76026030-76026049 None:intergenic 40.0%
!!! TCAGGAGCTTACTTTTTTGG+GGG - chr3.3:76026787-76026806 MS.gene06738:CDS 40.0%
AATGCGTGTTTGACACGTGT+TGG - chr3.3:76023284-76023303 MS.gene06738:intron 45.0%
ACAGGACTGCTTTCAAGAAG+TGG + chr3.3:76024377-76024396 None:intergenic 45.0%
ACATCATTTACTCACCGAGC+TGG - chr3.3:76024419-76024438 MS.gene06738:intron 45.0%
ACTCTTTCTCCCAGGATGAT+CGG - chr3.3:76024308-76024327 MS.gene06738:intron 45.0%
AGATAGTGTTGCAACTCGCA+AGG - chr3.3:76025689-76025708 MS.gene06738:CDS 45.0%
AGATGAATTACCGACACGGA+AGG + chr3.3:76026154-76026173 None:intergenic 45.0%
ATCAGAGCAGTTGTTGTCAG+AGG - chr3.3:76023565-76023584 MS.gene06738:CDS 45.0%
ATCATTTCGTCTGACTGTGC+TGG + chr3.3:76026248-76026267 None:intergenic 45.0%
ATTACCGACACGGAAGGATA+AGG + chr3.3:76026148-76026167 None:intergenic 45.0%
CCAAAGCTCACGAGCTAATT+TGG + chr3.3:76026854-76026873 None:intergenic 45.0%
CCAAATTAGCTCGTGAGCTT+TGG - chr3.3:76026851-76026870 MS.gene06738:CDS 45.0%
CCACTGCATCAATCCATAAC+AGG + chr3.3:76023541-76023560 None:intergenic 45.0%
CGAAGCATGCACTTAGAAAG+TGG + chr3.3:76023099-76023118 None:intergenic 45.0%
CTATTGGAATCCTCTGAGTG+CGG - chr3.3:76025973-76025992 MS.gene06738:intron 45.0%
GCGTAGGCTAGGTTATTTAG+TGG - chr3.3:76023437-76023456 MS.gene06738:intron 45.0%
GGGTTGTGCAGAAAAGAACT+TGG + chr3.3:76025325-76025344 None:intergenic 45.0%
TAAGGTAGCTGTAGCTTCAG+GGG + chr3.3:76025546-76025565 None:intergenic 45.0%
TAAGTGGAAGGTGAAGACCT+TGG + chr3.3:76022774-76022793 None:intergenic 45.0%
TATTGGAATCCTCTGAGTGC+GGG - chr3.3:76025974-76025993 MS.gene06738:intron 45.0%
TCTTGAGAATGGCGTTGCTA+TGG - chr3.3:76022676-76022695 MS.gene06738:CDS 45.0%
TGATTACTGATCGTAGCCCT+CGG + chr3.3:76023873-76023892 None:intergenic 45.0%
TGGCATGAGATCAACAGACA+AGG + chr3.3:76025395-76025414 None:intergenic 45.0%
! ATGACGCAAACGGGCTTATT+AGG + chr3.3:76022798-76022817 None:intergenic 45.0%
! CCTGTTATGGATTGATGCAG+TGG - chr3.3:76023538-76023557 MS.gene06738:CDS 45.0%
! GCATGCAAGCTTTCTAAGGA+AGG - chr3.3:76022935-76022954 MS.gene06738:intron 45.0%
! GTTGATGAGGGAACTGTATC+TGG - chr3.3:76024604-76024623 MS.gene06738:intron 45.0%
! TATGTAGGCAACTTCTGGCT+TGG - chr3.3:76022901-76022920 MS.gene06738:intron 45.0%
! TTCTTTTCTGCACAACCCGT+GGG - chr3.3:76025327-76025346 MS.gene06738:intron 45.0%
!! ATGTAGGCAACTTCTGGCTT+GGG - chr3.3:76022902-76022921 MS.gene06738:intron 45.0%
!! CAGCCTGAAAAGCTTTGAGA+TGG + chr3.3:76023715-76023734 None:intergenic 45.0%
!! TGCTTTGGGGATGCAGTAAT+AGG - chr3.3:76024050-76024069 MS.gene06738:intron 45.0%
!!! CAGGAGCTTACTTTTTTGGG+GGG - chr3.3:76026788-76026807 MS.gene06738:CDS 45.0%
!!! GCTTACTTTTTTGGGGGGAA+AGG - chr3.3:76026793-76026812 MS.gene06738:CDS 45.0%
AAGTTCCAGCAAGCCTGTCT+TGG - chr3.3:76025920-76025939 MS.gene06738:intron 50.0%
AGTTCCAGCAAGCCTGTCTT+GGG - chr3.3:76025921-76025940 MS.gene06738:intron 50.0%
CAAAGAATGCCACCCAAGAC+AGG + chr3.3:76025936-76025955 None:intergenic 50.0%
CAGAGGATTCCAATAGGCGT+AGG + chr3.3:76025969-76025988 None:intergenic 50.0%
CATTTACTCACCGAGCTGGT+AGG - chr3.3:76024423-76024442 MS.gene06738:intron 50.0%
CGCACTCAGAGGATTCCAAT+AGG + chr3.3:76025975-76025994 None:intergenic 50.0%
CTGTACCGAGCAGTGCAAAT+CGG + chr3.3:76023801-76023820 None:intergenic 50.0%
GATCATCCTGGGAGAAAGAG+TGG + chr3.3:76024309-76024328 None:intergenic 50.0%
GATGCCTTATCCTTCCGTGT+CGG - chr3.3:76026141-76026160 MS.gene06738:intron 50.0%
TACCCATCTGGCAAAGCTGT+CGG + chr3.3:76024804-76024823 None:intergenic 50.0%
TGCATCAGTGTTGCAGATCC+TGG - chr3.3:76025871-76025890 MS.gene06738:intron 50.0%
TTGCCAAAAGCAAGAGCCCA+CGG + chr3.3:76025346-76025365 None:intergenic 50.0%
! ACACGGAAGGATAAGGCATC+AGG + chr3.3:76026141-76026160 None:intergenic 50.0%
! CGCCCATCTCAAAGCTTTTC+AGG - chr3.3:76023709-76023728 MS.gene06738:intron 50.0%
! GCGACCCCCTTTGGTAATAA+GGG - chr3.3:76026898-76026917 MS.gene06738:CDS 50.0%
! GGATTCCGATTTGCACTGCT+CGG - chr3.3:76023793-76023812 MS.gene06738:intron 50.0%
! GTTCTTTTCTGCACAACCCG+TGG - chr3.3:76025326-76025345 MS.gene06738:intron 50.0%
AAGCCCGTTTGCGTCATCAC+CGG - chr3.3:76022801-76022820 MS.gene06738:intron 55.0%
AATCCAAAAGCCACTGCCGC+AGG + chr3.3:76023778-76023797 None:intergenic 55.0%
ACTCACAGGCGGAACAAGAG+CGG + chr3.3:76026019-76026038 None:intergenic 55.0%
ATCCAAAAGCCACTGCCGCA+GGG + chr3.3:76023777-76023796 None:intergenic 55.0%
ATCTCCTAGAGTCACAGCCG+AGG - chr3.3:76023853-76023872 MS.gene06738:intron 55.0%
CACCGACAGCTTTGCCAGAT+GGG - chr3.3:76024799-76024818 MS.gene06738:intron 55.0%
GGAATCATTCCCGCACTCAG+AGG + chr3.3:76025986-76026005 None:intergenic 55.0%
GGCGGAGTATGCTCCTTGTT+GGG + chr3.3:76025525-76025544 None:intergenic 55.0%
GGTGCTTCATTGCGTAGGCT+AGG - chr3.3:76023426-76023445 MS.gene06738:intron 55.0%
TCTCCTAGAGTCACAGCCGA+GGG - chr3.3:76023854-76023873 MS.gene06738:intron 55.0%
TGCCAAAAGCAAGAGCCCAC+GGG + chr3.3:76025345-76025364 None:intergenic 55.0%
! AACCCGTGGGCTCTTGCTTT+TGG - chr3.3:76025340-76025359 MS.gene06738:intron 55.0%
! ACTGAAGCGCCTACGCCTAT+TGG - chr3.3:76025957-76025976 MS.gene06738:intron 55.0%
! GGCGACCCCCTTTGGTAATA+AGG - chr3.3:76026897-76026916 MS.gene06738:CDS 55.0%
! TACGCCGGTGATGACGCAAA+CGG + chr3.3:76022808-76022827 None:intergenic 55.0%
!! GTGCTGGTTTGTGTGTGTGC+AGG + chr3.3:76026232-76026251 None:intergenic 55.0%
CCACCGACAGCTTTGCCAGA+TGG - chr3.3:76024798-76024817 MS.gene06738:intron 60.0%
CCATCTGGCAAAGCTGTCGG+TGG + chr3.3:76024801-76024820 None:intergenic 60.0%
GGGCGGAGTATGCTCCTTGT+TGG + chr3.3:76025526-76025545 None:intergenic 60.0%
GGGGGTCGCCGATAGCAAAT+TGG + chr3.3:76026887-76026906 None:intergenic 60.0%
GGTAGCTGTAGCTTCAGGGG+CGG + chr3.3:76025543-76025562 None:intergenic 60.0%
TAGCCCTCGGCTGTGACTCT+AGG + chr3.3:76023860-76023879 None:intergenic 60.0%
TCAGTACTTCCCTGCGGCAG+TGG - chr3.3:76023765-76023784 MS.gene06738:intron 60.0%
TCCAGCAAGCCTGTCTTGGG+TGG - chr3.3:76025924-76025943 MS.gene06738:intron 60.0%
TTGCTATCGGCGACCCCCTT+TGG - chr3.3:76026889-76026908 MS.gene06738:CDS 60.0%
! ACGCCGGTGATGACGCAAAC+GGG + chr3.3:76022807-76022826 None:intergenic 60.0%
! TTCCCTGCGGCAGTGGCTTT+TGG - chr3.3:76023772-76023791 MS.gene06738:intron 60.0%
GCCACCCAAGACAGGCTTGC+TGG + chr3.3:76025928-76025947 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 76022612 76026933 76022612 ID=MS.gene06738
chr3.3 mRNA 76022612 76026933 76022612 ID=MS.gene06738.t1;Parent=MS.gene06738
chr3.3 exon 76026721 76026933 76026721 ID=MS.gene06738.t1.exon1;Parent=MS.gene06738.t1
chr3.3 CDS 76026721 76026933 76026721 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76026571 76026637 76026571 ID=MS.gene06738.t1.exon2;Parent=MS.gene06738.t1
chr3.3 CDS 76026571 76026637 76026571 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76025959 76025987 76025959 ID=MS.gene06738.t1.exon3;Parent=MS.gene06738.t1
chr3.3 CDS 76025959 76025987 76025959 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76025660 76025868 76025660 ID=MS.gene06738.t1.exon4;Parent=MS.gene06738.t1
chr3.3 CDS 76025660 76025868 76025660 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76025105 76025223 76025105 ID=MS.gene06738.t1.exon5;Parent=MS.gene06738.t1
chr3.3 CDS 76025105 76025223 76025105 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76024860 76024955 76024860 ID=MS.gene06738.t1.exon6;Parent=MS.gene06738.t1
chr3.3 CDS 76024860 76024955 76024860 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76024700 76024775 76024700 ID=MS.gene06738.t1.exon7;Parent=MS.gene06738.t1
chr3.3 CDS 76024700 76024775 76024700 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76023513 76023666 76023513 ID=MS.gene06738.t1.exon8;Parent=MS.gene06738.t1
chr3.3 CDS 76023513 76023666 76023513 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
chr3.3 exon 76022612 76022764 76022612 ID=MS.gene06738.t1.exon9;Parent=MS.gene06738.t1
chr3.3 CDS 76022612 76022764 76022612 ID=cds.MS.gene06738.t1;Parent=MS.gene06738.t1
Gene Sequence

>MS.gene06738

ATGGGAATGATCAATTTGATAAAGGATTTATCACGGTCTCTCTATTTCCTCTGCTCAATTCAATTCTTGAGAATGGCGTTGCTATGGACCTTTTCTGTTGCATTTTCTCATTACCAATTGTTTAAGGATTCGCACTTTTCTCACAAAATCGTTTCATATCCAAGGTCTTCACCTTCCACTTATCCTAATAAGCCCGTTTGCGTCATCACCGGCGTAAGTTCTTTTTTCTTCCTTCTCTTGCAAATTTCATTAATTATTATTATTACTATGTGAATTCTATGATTTTTTCTATGTAGGCAACTTCTGGCTTGGGATTATCTACTGCATGCAAGCTTTCTAAGGAAGGATATGTTGTTGTTATTGGTAATTCTTTATTCTTTTTGCTAATCACGCTACAATTATGCTAAAATGCCTTATGTTTTAATTCCTTTTATATGCTAACAATTCACTATTTTCTACAGCTCCATTTAATTCTGAGTGAAATCCACTTTCTAAGTGCATGCTTCGATTCACCGTAAAATTGATCAAATTATGGTGCCATTGTGATTATATAAAGCTCTAACTCTAAACTGTAGTTTTTTTTTCCAAATCTTGTGATTATGTCAATCTCACCATCAATCCAGACATGCACTAATAGAAAGTGGATCTATGTAGCATCGAAGCTTCAAATTAAATGCGTGTTTGACACGTGTTGGTGTCTGTCTGACACTTGTGAGTTGTGACTAAAATACAATCACTTCTACTTTGTCAAATTTCTACGGTGTCTATGTGTCGACTTTAGTGTTATGTTGTGTCTGGTGTATGTGTCTATATTGGTGCTTCATTGCGTAGGCTAGGTTATTTAGTGGGATTTATCCAATAATAGTGTGTTCAAAAGACTATTTGGAAAAATGTTTTGCTACTTGCTAGCTTTCTTACCTAAGATTCCTGTTATGGATTGATGCAGTGGGAAGATCAGAGCAGTTGTTGTCAGAGGTATTTTTCTATATTAATTATTAGCATCGTGGTAATGATGATTCCATTCATCGTAAATATCTTAATCATGTTCTTTCCATTGTTTGGTAGACCATAACAAAGATCAAAGGTTGGAATGAGGACGCCCATCTCAAAGCTTTTCAGGCTGATCTTTCGTCAGTTCAGTCAATTATAAAGTTCAGTACTTCCCTGCGGCAGTGGCTTTTGGATTCCGATTTGCACTGCTCGGTACAGATACTAATAAACAATGCTGGAATACTTGCAACATCTCCTAGAGTCACAGCCGAGGGCTACGATCAGTAATCACTTTTTTCTTCTTCTTATCTTCTGTGCTTGTGGTTAACAAAATTCTATCTTTATCGTTGGAATTTTCATGCTCATGCTTGCCTTGCATAACACAATAAAAGGTGCATAAGACACACTTTCAAGTAATATTACTTTCCTGATGTGCATAATTTATTTATGCTTTGGGGATGCAGTAATAGGTATTAATTAAATGTCAACTTTTGAGATGGTGTTGATTTGCATGACATGATCACCAGGAACTTTATGGAACTGATACTTGAGAAACATAGTTAGAAGCATTTGTATGCACATTGGATGCATTTTTATGGGAGCCTTTGATGCAATGTTATTTATCTGTTTTATATATGCTCCATGTTTGTCTAACTGTCTGAGTTTCGAAATTAGTAGTTACTCTTAAAATCCAACTATATTTTCCACTCTTTCTCCCAGGATGATCGGCACAAATTATATCGGCCCATTTGTTATGACCAAGCTTCTATTACCACTTCTTGAAAGCAGTCCTGTATCTTCCAAAATTGTTAATGTAACATCATTTACTCACCGAGCTGGTAGGATAATCATTTTAGTCCTCACTTTTTGATTTATATTATTGTCTAGTGATCCTACTCTTTGGGTTTTACTGTCTTCCATAAAACACTTATTGATTTTCTCTACAATGGCGCGCTCCTATAGAACCTTCTCAAGCTCTTTTCTTCAGTTACTAATATGCAGGTTGATGAGGGAACTGTATCTGGAAAGAGATTTTTAAAATCTAAACAATATCCATATGCTCAGATCTATGAGTATTCAAAATGTAAGCTGCATATTCTGAATGAATTATATAGATTACACTGTATCTTTAGCCCTAATTCCTAACTAGCATGTATTTTTGTTGAAGTATGTCTACTTCTCTTCTCATATGAGTTCCACCGACAGCTTTGCCAGATGGGTAAATCTCATCAGATATTTGTCAAGTATGTTTACCAAATCAACTTTTATTTCCTTTTGCCATCCTTTTTTCCAAGTGTTGTGTGTTTTTATAAAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCACAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACTTTTTAGTCCCTGTGACATTTTCCTTAAGTATTTTAGGGACCAAAAATGTTGGTGAATTTTTTTTACAGGGACTAAAATGCTGATGGAAAATTTTTATAGGGACTAAAAATGCTAATGAACAATTTTATAGGGACTAAAAAGTGCGATTTTATTTTGTAGGGACTAAAAACAAAATTCTGAATATTTATAGGGACTAAAAACTTAATTAACCCTTTTATAAATATAGGTTATTTGTTTTTGTATATGTTACCTAATTAATGTATTACTGTGATATTTGTTGCTCGAACATGTTTGTCTGATTGCTTCCATGACTTTCCTACAAATTATTGTTTCCCAAGTTCTTTTCTGCACAACCCGTGGGCTCTTGCTTTTGGCAAATGTATATGCCAATCTGAAGATAATGCCTTGTCTGTTGATCTCATGCCAAACCTGTAATTCTCATATAGTTCTGAACTTTCAATTAAAGGCTGAGATCTGTTATGCATCCCTCTCTTGTTAAGGATACAACGGAGCTACTATCACAATCTTTGTCTCCCAACAAGGAGCATACTCCGCCCCTGAAGCTACAGCTACCTTATTATCCAATGAGTTTGAAGGAAAAATGTTTAAGTGCGAGCAGATACACTCTTATGAAAACTCACTTGTGGTTGTGTTTGACATTGTTGCATAGATAGCACCAATAAGAGTAACTTTGGGTTTGAGATAGTGTTGCAACTCGCAAGGAAAACGAACATGAATAAAAATCATACGGGAAAATAAAAGTTTGCAAGAAAAAGAGAGCCTTGCAAAATGTTTTAAGCTTTGTAGATAAAACTTTATTATATTTCTGGTTAATAACCATGGGTTCTACTCCACTTTTAATATTCATTTTCTGTATTGCTATGCATCAGTGTTGCAGATCCTGGAGTTGTACAAACAAACATCATGCGAGAAGTTCCAGCAAGCCTGTCTTGGGTGGCATTCTTTGTACTGAAGCGCCTACGCCTATTGGAATCCTCTGAGTGCGGGAATGATTCCATTATTGATGCCGCTCTTGTTCCGCCTGTGAGTACTTTTTTAGCAGTCTTTGTTGATATCTATTTTACATTTTTATTGCAAGCATTGATGTTTCAAAGTGACTGAAGGTTTCATCTGATGCAATATCTAATGCCTGATGCCTTATCCTTCCGTGTCGGTAATTCATCTTGAACTAACACAAGGAAACAACATATTCGTCAATTATTTACATAAATACATTAAGCCTGCACACACACAAACCAGCACAGTCAGACGAAATGATTGAAAGTAGCAACTAACACACTCATGAAATTAAATTTATTGTAAAATACGAGATTAATACATATGTTCTTGAAAATATATGATTTTTTCCTCGTGTTTTTGTACTGCTAAAAATGTTCTGTTGTATGACTAAAACAGTAAAGTATTAAAAAACAATGATACACTTTTTTGGGTAGAAAAATATAAGCTTAAATGCAGTTCTTGTCCCTCTATTTTAACTGAACATGATTTTTCGTCTCTCCATTATAAATTCAGGATTTTAGTCTCTTAGTTTCACAAGTTTGAGGATTCTTTTTTTCAGAACCCAATTGCGAGCTTATTCTTTATAACTTGTCATTTTCATTAATGACGTGGAATTACATTTGATGATTTGACAATTACTAATTTGGACCTTTTGAATAATTGATCTGTACAAATAGTTATCCTCGATCACTGATATTTCTTACAAATTAGTCTTGAGTCTTGACTGGAGCCATTGAGTTCAAAATGTTAATAAGCGTACATTTTTTTTCAGGGAACATCAGGAGCTTACTTTTTTGGGGGGAAAGGTAGAACTATAAATTCTTCAGCATTGTCACAAGACGCCAAATTAGCTCGTGAGCTTTGGGAAACTACATCCAATTTGCTATCGGCGACCCCCTTTGGTAATAAGGGAAACAATTTTTAG
Protein sequence

>MS.gene06738.t1

MGMINLIKDLSRSLYFLCSIQFLRMALLWTFSVAFSHYQLFKDSHFSHKIVSYPRSSPSTYPNKPVCVITGATSGLGLSTACKLSKEGYVVVIVGRSEQLLSETITKIKGWNEDAHLKAFQADLSSVQSIIKFSTSLRQWLLDSDLHCSVQILINNAGILATSPRVTAEGYDQMIGTNYIGPFVMTKLLLPLLESSPVSSKIVNVTSFTHRAVTNMQVDEGTVSGKRFLKSKQYPYAQIYEYSKLCLLLFSYEFHRQLCQMGKSHQIFVNVADPGVVQTNIMREVPASLSWVAFFVLKRLRLLESSECGNDSIIDAALVPPGTSGAYFFGGKGRTINSSALSQDAKLARELWETTSNLLSATPFGNKGNNF