Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070036.t1 | XP_003628399.1 | 88.3 | 349 | 8 | 1 | 1 | 316 | 303 | 651 | 1.20E-168 | 602.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070036.t1 | Q9SAJ3 | 75.9 | 349 | 51 | 1 | 1 | 316 | 323 | 671 | 2.9e-147 | 522.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070036.t1 | G7LB10 | 88.3 | 349 | 8 | 1 | 1 | 316 | 303 | 651 | 8.6e-169 | 602.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049297 | MS.gene070036 | 0.891111 | 5.35E-74 | -1.69E-46 |
MS.gene049378 | MS.gene070036 | 0.807517 | 4.86E-50 | -1.69E-46 |
MS.gene049758 | MS.gene070036 | 0.830324 | 3.13E-55 | -1.69E-46 |
MS.gene050226 | MS.gene070036 | 0.84855 | 5.71E-60 | -1.69E-46 |
MS.gene050227 | MS.gene070036 | 0.852292 | 5.08E-61 | -1.69E-46 |
MS.gene050228 | MS.gene070036 | 0.855839 | 4.82E-62 | -1.69E-46 |
MS.gene050301 | MS.gene070036 | 0.807657 | 4.54E-50 | -1.69E-46 |
MS.gene050330 | MS.gene070036 | -0.820476 | 6.72E-53 | -1.69E-46 |
MS.gene050438 | MS.gene070036 | 0.828555 | 8.42E-55 | -1.69E-46 |
MS.gene050442 | MS.gene070036 | 0.815558 | 8.69E-52 | -1.69E-46 |
MS.gene050558 | MS.gene070036 | 0.856619 | 2.85E-62 | -1.69E-46 |
MS.gene050623 | MS.gene070036 | -0.846015 | 2.83E-59 | -1.69E-46 |
MS.gene050642 | MS.gene070036 | 0.834026 | 3.80E-56 | -1.69E-46 |
MS.gene050719 | MS.gene070036 | 0.802973 | 4.35E-49 | -1.69E-46 |
MS.gene050721 | MS.gene070036 | 0.801548 | 8.55E-49 | -1.69E-46 |
MS.gene050820 | MS.gene070036 | 0.820405 | 6.98E-53 | -1.69E-46 |
MS.gene051662 | MS.gene070036 | 0.861225 | 1.19E-63 | -1.69E-46 |
MS.gene051663 | MS.gene070036 | 0.854112 | 1.53E-61 | -1.69E-46 |
MS.gene051860 | MS.gene070036 | 0.822438 | 2.37E-53 | -1.69E-46 |
MS.gene051983 | MS.gene070036 | 0.827413 | 1.59E-54 | -1.69E-46 |
MS.gene052048 | MS.gene070036 | -0.800218 | 1.60E-48 | -1.69E-46 |
MS.gene052256 | MS.gene070036 | 0.806358 | 8.55E-50 | -1.69E-46 |
MS.gene052302 | MS.gene070036 | 0.82527 | 5.14E-54 | -1.69E-46 |
MS.gene052376 | MS.gene070036 | 0.835492 | 1.63E-56 | -1.69E-46 |
MS.gene052600 | MS.gene070036 | 0.848573 | 5.62E-60 | -1.69E-46 |
MS.gene052665 | MS.gene070036 | 0.801998 | 6.91E-49 | -1.69E-46 |
MS.gene052860 | MS.gene070036 | 0.800033 | 1.74E-48 | -1.69E-46 |
MS.gene053630 | MS.gene070036 | 0.844217 | 8.67E-59 | -1.69E-46 |
MS.gene053836 | MS.gene070036 | 0.868732 | 5.25E-66 | -1.69E-46 |
MS.gene053907 | MS.gene070036 | 0.80058 | 1.35E-48 | -1.69E-46 |
MS.gene054473 | MS.gene070036 | 0.810887 | 9.22E-51 | -1.69E-46 |
MS.gene054930 | MS.gene070036 | 0.804642 | 1.96E-49 | -1.69E-46 |
MS.gene054942 | MS.gene070036 | 0.907417 | 5.19E-81 | -1.69E-46 |
MS.gene055422 | MS.gene070036 | 0.833226 | 6.02E-56 | -1.69E-46 |
MS.gene055428 | MS.gene070036 | 0.80334 | 3.65E-49 | -1.69E-46 |
MS.gene056069 | MS.gene070036 | -0.813617 | 2.34E-51 | -1.69E-46 |
MS.gene056875 | MS.gene070036 | 0.837904 | 3.95E-57 | -1.69E-46 |
MS.gene056979 | MS.gene070036 | 0.816292 | 5.96E-52 | -1.69E-46 |
MS.gene057121 | MS.gene070036 | 0.850004 | 2.25E-60 | -1.69E-46 |
MS.gene057245 | MS.gene070036 | 0.8194 | 1.18E-52 | -1.69E-46 |
MS.gene057260 | MS.gene070036 | 0.832735 | 7.98E-56 | -1.69E-46 |
MS.gene057439 | MS.gene070036 | 0.822865 | 1.88E-53 | -1.69E-46 |
MS.gene057469 | MS.gene070036 | 0.809228 | 2.10E-50 | -1.69E-46 |
MS.gene057750 | MS.gene070036 | 0.802403 | 5.71E-49 | -1.69E-46 |
MS.gene057869 | MS.gene070036 | 0.802285 | 6.03E-49 | -1.69E-46 |
MS.gene057967 | MS.gene070036 | 0.82246 | 2.34E-53 | -1.69E-46 |
MS.gene058002 | MS.gene070036 | 0.813381 | 2.63E-51 | -1.69E-46 |
MS.gene05811 | MS.gene070036 | 0.806141 | 9.50E-50 | -1.69E-46 |
MS.gene058142 | MS.gene070036 | 0.812905 | 3.35E-51 | -1.69E-46 |
MS.gene058833 | MS.gene070036 | 0.80367 | 3.12E-49 | -1.69E-46 |
MS.gene058845 | MS.gene070036 | 0.800134 | 1.66E-48 | -1.69E-46 |
MS.gene05984 | MS.gene070036 | 0.812472 | 4.17E-51 | -1.69E-46 |
MS.gene060137 | MS.gene070036 | -0.815802 | 7.67E-52 | -1.69E-46 |
MS.gene060476 | MS.gene070036 | 0.809882 | 1.52E-50 | -1.69E-46 |
MS.gene061040 | MS.gene070036 | -0.821299 | 4.35E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070036.t1 | MTR_8g056860 | 88.252 | 349 | 8 | 1 | 1 | 316 | 303 | 651 | 0.0 | 620 |
MS.gene070036.t1 | MTR_3g104470 | 42.857 | 168 | 85 | 3 | 150 | 315 | 239 | 397 | 1.24e-35 | 136 |
MS.gene070036.t1 | MTR_3g104480 | 42.262 | 168 | 86 | 3 | 150 | 315 | 237 | 395 | 2.12e-35 | 135 |
MS.gene070036.t1 | MTR_2g438140 | 42.857 | 168 | 80 | 4 | 152 | 313 | 243 | 400 | 9.73e-34 | 131 |
MS.gene070036.t1 | MTR_4g094662 | 42.262 | 168 | 81 | 4 | 152 | 313 | 246 | 403 | 9.84e-34 | 131 |
MS.gene070036.t1 | MTR_7g010800 | 41.667 | 168 | 82 | 4 | 152 | 313 | 223 | 380 | 1.56e-33 | 130 |
MS.gene070036.t1 | MTR_2g438140 | 42.857 | 168 | 80 | 4 | 152 | 313 | 303 | 460 | 1.57e-33 | 130 |
MS.gene070036.t1 | MTR_1g028390 | 36.413 | 184 | 107 | 2 | 138 | 320 | 332 | 506 | 6.75e-33 | 129 |
MS.gene070036.t1 | MTR_6g016600 | 40.476 | 168 | 89 | 3 | 150 | 315 | 332 | 490 | 6.72e-32 | 125 |
MS.gene070036.t1 | MTR_3g115110 | 38.806 | 201 | 97 | 6 | 129 | 313 | 233 | 423 | 1.17e-31 | 125 |
MS.gene070036.t1 | MTR_8g099605 | 40.217 | 184 | 88 | 3 | 145 | 315 | 414 | 588 | 2.36e-31 | 124 |
MS.gene070036.t1 | MTR_8g099605 | 40.217 | 184 | 88 | 3 | 145 | 315 | 173 | 347 | 2.37e-31 | 124 |
MS.gene070036.t1 | MTR_7g078570 | 39.881 | 168 | 86 | 3 | 152 | 313 | 209 | 367 | 5.84e-31 | 123 |
MS.gene070036.t1 | MTR_4g064350 | 39.286 | 168 | 87 | 3 | 152 | 313 | 337 | 495 | 1.02e-30 | 122 |
MS.gene070036.t1 | MTR_5g075340 | 39.157 | 166 | 90 | 3 | 150 | 313 | 244 | 400 | 3.49e-30 | 121 |
MS.gene070036.t1 | MTR_6g059690 | 39.286 | 168 | 87 | 4 | 152 | 313 | 214 | 372 | 1.01e-29 | 119 |
MS.gene070036.t1 | MTR_0376s0020 | 39.053 | 169 | 85 | 4 | 152 | 313 | 18 | 175 | 1.39e-29 | 118 |
MS.gene070036.t1 | MTR_7g096060 | 39.286 | 168 | 87 | 4 | 152 | 313 | 257 | 415 | 1.49e-29 | 119 |
MS.gene070036.t1 | MTR_5g069780 | 38.824 | 170 | 89 | 3 | 150 | 313 | 328 | 488 | 7.34e-29 | 117 |
MS.gene070036.t1 | MTR_3g462930 | 38.824 | 170 | 89 | 3 | 150 | 313 | 319 | 479 | 1.90e-28 | 115 |
MS.gene070036.t1 | MTR_5g075360 | 36.207 | 174 | 100 | 3 | 144 | 315 | 25 | 189 | 5.83e-28 | 113 |
MS.gene070036.t1 | MTR_5g075360 | 36.207 | 174 | 100 | 3 | 144 | 315 | 75 | 239 | 7.77e-28 | 113 |
MS.gene070036.t1 | MTR_5g075360 | 36.207 | 174 | 100 | 3 | 144 | 315 | 251 | 415 | 1.05e-27 | 114 |
MS.gene070036.t1 | MTR_5g075360 | 36.207 | 174 | 100 | 3 | 144 | 315 | 201 | 365 | 1.06e-27 | 113 |
MS.gene070036.t1 | MTR_3g112260 | 39.106 | 179 | 95 | 4 | 142 | 315 | 144 | 313 | 3.37e-27 | 110 |
MS.gene070036.t1 | MTR_2g007010 | 42.135 | 178 | 87 | 7 | 144 | 313 | 244 | 413 | 6.32e-27 | 111 |
MS.gene070036.t1 | MTR_2g007010 | 36.585 | 164 | 89 | 6 | 153 | 312 | 547 | 699 | 1.65e-19 | 89.7 |
MS.gene070036.t1 | MTR_3g096000 | 38.462 | 169 | 90 | 3 | 150 | 312 | 311 | 471 | 6.48e-27 | 111 |
MS.gene070036.t1 | MTR_3g117230 | 38.547 | 179 | 96 | 4 | 142 | 315 | 147 | 316 | 8.25e-27 | 109 |
MS.gene070036.t1 | MTR_3g062510 | 39.333 | 150 | 77 | 3 | 172 | 316 | 197 | 337 | 3.23e-25 | 104 |
MS.gene070036.t1 | MTR_2g101290 | 36.905 | 168 | 92 | 3 | 150 | 312 | 430 | 588 | 3.46e-25 | 106 |
MS.gene070036.t1 | MTR_2g101290 | 36.905 | 168 | 92 | 3 | 150 | 312 | 430 | 588 | 3.65e-25 | 106 |
MS.gene070036.t1 | MTR_3g062510 | 39.333 | 150 | 77 | 3 | 172 | 316 | 197 | 337 | 1.29e-24 | 103 |
MS.gene070036.t1 | MTR_3g104490 | 37.415 | 147 | 81 | 3 | 150 | 294 | 222 | 359 | 3.04e-23 | 100 |
MS.gene070036.t1 | MTR_4g094270 | 34.503 | 171 | 97 | 3 | 157 | 321 | 179 | 340 | 3.28e-23 | 99.4 |
MS.gene070036.t1 | MTR_1g083330 | 35.429 | 175 | 99 | 4 | 146 | 315 | 179 | 344 | 4.11e-23 | 99.4 |
MS.gene070036.t1 | MTR_4g033235 | 35.429 | 175 | 99 | 4 | 146 | 315 | 180 | 345 | 4.35e-23 | 99.0 |
MS.gene070036.t1 | MTR_8g469460 | 37.415 | 147 | 81 | 3 | 150 | 294 | 222 | 359 | 4.61e-23 | 100 |
MS.gene070036.t1 | MTR_1g063380 | 33.690 | 187 | 106 | 4 | 144 | 321 | 484 | 661 | 8.54e-23 | 99.4 |
MS.gene070036.t1 | MTR_1g063380 | 38.750 | 160 | 85 | 4 | 157 | 313 | 228 | 377 | 1.95e-22 | 98.2 |
MS.gene070036.t1 | MTR_2g095210 | 33.155 | 187 | 107 | 4 | 144 | 321 | 412 | 589 | 1.95e-22 | 98.2 |
MS.gene070036.t1 | MTR_7g101870 | 33.690 | 187 | 106 | 4 | 144 | 321 | 485 | 662 | 2.41e-22 | 98.2 |
MS.gene070036.t1 | MTR_7g101870 | 38.922 | 167 | 75 | 5 | 157 | 313 | 229 | 378 | 3.17e-22 | 97.8 |
MS.gene070036.t1 | MTR_5g009840 | 33.495 | 206 | 111 | 9 | 124 | 320 | 508 | 696 | 6.83e-22 | 96.7 |
MS.gene070036.t1 | MTR_7g088850 | 33.537 | 164 | 95 | 3 | 157 | 315 | 305 | 459 | 7.39e-22 | 96.3 |
MS.gene070036.t1 | MTR_3g023890 | 34.031 | 191 | 115 | 6 | 128 | 313 | 85 | 269 | 7.42e-22 | 96.7 |
MS.gene070036.t1 | MTR_3g023890 | 36.111 | 144 | 77 | 4 | 173 | 312 | 424 | 556 | 3.37e-19 | 88.6 |
MS.gene070036.t1 | MTR_5g074850 | 34.483 | 174 | 95 | 6 | 150 | 313 | 513 | 677 | 1.95e-21 | 95.5 |
MS.gene070036.t1 | MTR_8g099065 | 32.500 | 200 | 101 | 7 | 127 | 318 | 539 | 712 | 4.69e-21 | 94.4 |
MS.gene070036.t1 | MTR_7g088830 | 34.302 | 172 | 102 | 4 | 149 | 320 | 410 | 570 | 6.04e-21 | 94.0 |
MS.gene070036.t1 | MTR_7g088830 | 38.926 | 149 | 70 | 4 | 173 | 313 | 697 | 832 | 5.70e-20 | 91.3 |
MS.gene070036.t1 | MTR_3g023900 | 36.620 | 142 | 79 | 3 | 173 | 312 | 570 | 702 | 6.28e-21 | 94.0 |
MS.gene070036.t1 | MTR_3g023900 | 36.806 | 144 | 85 | 3 | 173 | 313 | 274 | 414 | 2.17e-20 | 92.4 |
MS.gene070036.t1 | MTR_2g095320 | 38.217 | 157 | 84 | 4 | 160 | 313 | 175 | 321 | 9.65e-21 | 93.2 |
MS.gene070036.t1 | MTR_2g095320 | 32.571 | 175 | 98 | 5 | 144 | 309 | 427 | 590 | 1.57e-15 | 77.8 |
MS.gene070036.t1 | MTR_6g033740 | 31.863 | 204 | 113 | 8 | 124 | 318 | 492 | 678 | 3.74e-20 | 91.7 |
MS.gene070036.t1 | MTR_1g069105 | 32.203 | 177 | 106 | 3 | 142 | 313 | 196 | 363 | 5.76e-20 | 90.1 |
MS.gene070036.t1 | MTR_7g089040 | 39.597 | 149 | 69 | 4 | 173 | 313 | 724 | 859 | 8.10e-20 | 90.5 |
MS.gene070036.t1 | MTR_7g089040 | 37.162 | 148 | 74 | 4 | 171 | 312 | 421 | 555 | 1.06e-17 | 84.3 |
MS.gene070036.t1 | MTR_1g069105 | 30.811 | 185 | 114 | 3 | 142 | 321 | 196 | 371 | 9.24e-20 | 89.7 |
MS.gene070036.t1 | MTR_7g099640 | 30.811 | 185 | 114 | 3 | 142 | 321 | 195 | 370 | 9.45e-20 | 89.7 |
MS.gene070036.t1 | MTR_7g099640 | 30.811 | 185 | 114 | 3 | 142 | 321 | 195 | 370 | 1.12e-19 | 89.4 |
MS.gene070036.t1 | MTR_1g088730 | 35.028 | 177 | 97 | 7 | 145 | 314 | 942 | 1107 | 2.02e-19 | 89.7 |
MS.gene070036.t1 | MTR_3g089100 | 33.333 | 198 | 111 | 8 | 124 | 314 | 923 | 1106 | 1.20e-18 | 87.4 |
MS.gene070036.t1 | MTR_1g088750 | 33.898 | 177 | 99 | 7 | 145 | 314 | 899 | 1064 | 1.20e-18 | 87.4 |
MS.gene070036.t1 | MTR_1g088750 | 33.898 | 177 | 99 | 7 | 145 | 314 | 948 | 1113 | 1.28e-18 | 87.0 |
MS.gene070036.t1 | MTR_3g089100 | 33.333 | 198 | 111 | 8 | 124 | 314 | 894 | 1077 | 1.31e-18 | 87.0 |
MS.gene070036.t1 | MTR_3g089100 | 33.333 | 198 | 111 | 8 | 124 | 314 | 889 | 1072 | 1.34e-18 | 87.0 |
MS.gene070036.t1 | MTR_1g101870 | 34.426 | 183 | 102 | 8 | 145 | 320 | 515 | 686 | 1.83e-18 | 86.7 |
MS.gene070036.t1 | MTR_1g101870 | 34.426 | 183 | 102 | 8 | 145 | 320 | 567 | 738 | 1.98e-18 | 86.7 |
MS.gene070036.t1 | MTR_1g095660 | 32.203 | 177 | 98 | 5 | 157 | 321 | 141 | 307 | 3.63e-18 | 84.7 |
MS.gene070036.t1 | MTR_7g089290 | 35.065 | 154 | 66 | 5 | 173 | 311 | 705 | 839 | 3.92e-18 | 85.5 |
MS.gene070036.t1 | MTR_7g089290 | 35.065 | 154 | 66 | 5 | 173 | 311 | 677 | 811 | 4.42e-18 | 85.5 |
MS.gene070036.t1 | MTR_1g099470 | 32.961 | 179 | 105 | 8 | 145 | 318 | 444 | 612 | 5.77e-18 | 85.1 |
MS.gene070036.t1 | MTR_1g099480 | 31.492 | 181 | 110 | 6 | 145 | 320 | 478 | 649 | 9.34e-18 | 84.3 |
MS.gene070036.t1 | MTR_8g099065 | 32.447 | 188 | 93 | 7 | 127 | 306 | 539 | 700 | 1.24e-17 | 84.0 |
MS.gene070036.t1 | MTR_4g067100 | 35.795 | 176 | 96 | 6 | 148 | 315 | 393 | 559 | 1.34e-17 | 84.0 |
MS.gene070036.t1 | MTR_4g067100 | 35.795 | 176 | 96 | 6 | 148 | 315 | 393 | 559 | 1.42e-17 | 84.0 |
MS.gene070036.t1 | MTR_2g078630 | 36.424 | 151 | 80 | 4 | 172 | 315 | 104 | 245 | 6.26e-17 | 82.0 |
MS.gene070036.t1 | MTR_2g078630 | 36.424 | 151 | 80 | 4 | 172 | 315 | 632 | 773 | 1.53e-16 | 80.9 |
MS.gene070036.t1 | MTR_1g080430 | 27.094 | 203 | 121 | 5 | 125 | 320 | 677 | 859 | 1.88e-16 | 80.9 |
MS.gene070036.t1 | MTR_1g080430 | 27.094 | 203 | 121 | 5 | 125 | 320 | 677 | 859 | 1.91e-16 | 80.5 |
MS.gene070036.t1 | MTR_2g024440 | 37.580 | 157 | 74 | 9 | 172 | 320 | 260 | 400 | 2.61e-16 | 79.7 |
MS.gene070036.t1 | MTR_7g088980 | 33.735 | 166 | 92 | 4 | 157 | 315 | 159 | 313 | 2.72e-16 | 79.3 |
MS.gene070036.t1 | MTR_7g088980 | 33.735 | 166 | 92 | 4 | 157 | 315 | 335 | 489 | 3.45e-16 | 79.7 |
MS.gene070036.t1 | MTR_7g088980 | 33.735 | 166 | 92 | 4 | 157 | 315 | 241 | 395 | 3.49e-16 | 79.3 |
MS.gene070036.t1 | MTR_7g088980 | 33.735 | 166 | 92 | 4 | 157 | 315 | 309 | 463 | 4.29e-16 | 79.3 |
MS.gene070036.t1 | MTR_7g088980 | 29.858 | 211 | 110 | 9 | 130 | 316 | 2 | 198 | 1.33e-12 | 68.6 |
MS.gene070036.t1 | MTR_2g024440 | 37.580 | 157 | 74 | 9 | 172 | 320 | 343 | 483 | 4.38e-16 | 79.3 |
MS.gene070036.t1 | MTR_2g024440 | 37.580 | 157 | 74 | 9 | 172 | 320 | 342 | 482 | 4.88e-16 | 79.0 |
MS.gene070036.t1 | MTR_4g074920 | 31.122 | 196 | 119 | 6 | 102 | 290 | 636 | 822 | 6.83e-16 | 79.0 |
MS.gene070036.t1 | MTR_4g096870 | 35.333 | 150 | 79 | 6 | 172 | 315 | 156 | 293 | 9.87e-16 | 77.8 |
MS.gene070036.t1 | MTR_4g011810 | 33.987 | 153 | 93 | 5 | 172 | 320 | 279 | 427 | 2.17e-15 | 77.0 |
MS.gene070036.t1 | MTR_3g092070 | 35.948 | 153 | 75 | 7 | 172 | 316 | 120 | 257 | 3.29e-15 | 75.5 |
MS.gene070036.t1 | MTR_3g092070 | 36.667 | 150 | 72 | 7 | 172 | 313 | 120 | 254 | 5.72e-15 | 75.5 |
MS.gene070036.t1 | MTR_4g053350 | 32.121 | 165 | 95 | 5 | 162 | 321 | 154 | 306 | 6.01e-15 | 75.5 |
MS.gene070036.t1 | MTR_4g053350 | 32.121 | 165 | 95 | 5 | 162 | 321 | 154 | 306 | 6.14e-15 | 75.5 |
MS.gene070036.t1 | MTR_2g086160 | 32.143 | 168 | 91 | 6 | 162 | 321 | 159 | 311 | 6.21e-15 | 75.1 |
MS.gene070036.t1 | MTR_2g086160 | 32.143 | 168 | 91 | 6 | 162 | 321 | 159 | 311 | 1.12e-14 | 74.7 |
MS.gene070036.t1 | MTR_6g023875 | 37.241 | 145 | 82 | 5 | 172 | 315 | 419 | 555 | 1.39e-14 | 74.7 |
MS.gene070036.t1 | MTR_3g092080 | 35.294 | 153 | 76 | 7 | 172 | 316 | 123 | 260 | 2.65e-14 | 73.2 |
MS.gene070036.t1 | MTR_3g092080 | 35.294 | 153 | 76 | 7 | 172 | 316 | 123 | 260 | 3.03e-14 | 72.8 |
MS.gene070036.t1 | MTR_1g099480 | 31.737 | 167 | 100 | 6 | 145 | 306 | 478 | 635 | 4.21e-14 | 73.2 |
MS.gene070036.t1 | MTR_7g075520 | 33.793 | 145 | 85 | 5 | 171 | 313 | 248 | 383 | 7.14e-14 | 72.4 |
MS.gene070036.t1 | MTR_7g088980 | 29.858 | 211 | 110 | 9 | 130 | 316 | 2 | 198 | 1.06e-12 | 68.9 |
MS.gene070036.t1 | MTR_6g023865 | 32.903 | 155 | 89 | 5 | 172 | 315 | 195 | 345 | 1.46e-12 | 68.6 |
MS.gene070036.t1 | MTR_8g023550 | 31.618 | 136 | 79 | 3 | 191 | 321 | 207 | 333 | 2.17e-12 | 67.8 |
MS.gene070036.t1 | MTR_4g088885 | 34.161 | 161 | 80 | 7 | 168 | 313 | 257 | 406 | 2.86e-12 | 67.8 |
MS.gene070036.t1 | MTR_1g044600 | 37.736 | 106 | 50 | 3 | 214 | 313 | 208 | 303 | 1.08e-11 | 65.9 |
MS.gene070036.t1 | MTR_6g005760 | 31.757 | 148 | 85 | 5 | 172 | 316 | 236 | 370 | 4.23e-11 | 63.9 |
MS.gene070036.t1 | MTR_6g005760 | 31.757 | 148 | 85 | 5 | 172 | 316 | 364 | 498 | 6.45e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070036.t1 | AT1G79560 | 75.931 | 349 | 51 | 1 | 1 | 316 | 323 | 671 | 0.0 | 539 |
MS.gene070036.t1 | AT1G79560 | 75.931 | 349 | 51 | 1 | 1 | 316 | 323 | 671 | 0.0 | 538 |
MS.gene070036.t1 | AT1G79560 | 75.931 | 349 | 51 | 1 | 1 | 316 | 323 | 671 | 0.0 | 538 |
MS.gene070036.t1 | AT2G26140 | 42.857 | 168 | 85 | 3 | 150 | 315 | 239 | 397 | 7.51e-36 | 137 |
MS.gene070036.t1 | AT2G30950 | 42.857 | 168 | 80 | 4 | 152 | 313 | 241 | 398 | 3.62e-34 | 132 |
MS.gene070036.t1 | AT2G30950 | 42.857 | 168 | 80 | 4 | 152 | 313 | 241 | 398 | 3.62e-34 | 132 |
MS.gene070036.t1 | AT2G30950 | 42.857 | 168 | 80 | 4 | 152 | 313 | 241 | 398 | 3.62e-34 | 132 |
MS.gene070036.t1 | AT2G30950 | 42.857 | 168 | 80 | 4 | 152 | 313 | 245 | 402 | 4.11e-34 | 132 |
MS.gene070036.t1 | AT1G06430 | 42.262 | 168 | 81 | 4 | 152 | 313 | 234 | 391 | 6.26e-34 | 131 |
MS.gene070036.t1 | AT1G06430 | 42.262 | 168 | 81 | 4 | 152 | 313 | 234 | 391 | 6.26e-34 | 131 |
MS.gene070036.t1 | AT1G06430 | 42.262 | 168 | 81 | 4 | 152 | 313 | 234 | 391 | 6.26e-34 | 131 |
MS.gene070036.t1 | AT5G15250 | 41.420 | 169 | 83 | 4 | 151 | 313 | 237 | 395 | 2.98e-33 | 129 |
MS.gene070036.t1 | AT5G53170 | 37.288 | 177 | 101 | 2 | 138 | 313 | 362 | 529 | 8.71e-33 | 129 |
MS.gene070036.t1 | AT5G42270 | 30.704 | 355 | 178 | 11 | 7 | 313 | 87 | 421 | 1.80e-32 | 127 |
MS.gene070036.t1 | AT1G50250 | 38.806 | 201 | 97 | 6 | 129 | 313 | 243 | 433 | 5.76e-32 | 126 |
MS.gene070036.t1 | AT3G02450 | 40.000 | 170 | 91 | 3 | 148 | 315 | 344 | 504 | 6.57e-32 | 125 |
MS.gene070036.t1 | AT5G15250 | 40.491 | 163 | 81 | 4 | 151 | 307 | 237 | 389 | 4.39e-30 | 119 |
MS.gene070036.t1 | AT4G23940 | 39.227 | 181 | 88 | 3 | 148 | 315 | 440 | 611 | 7.07e-30 | 120 |
MS.gene070036.t1 | AT5G58870 | 34.454 | 238 | 140 | 5 | 82 | 313 | 274 | 501 | 5.21e-29 | 117 |
MS.gene070036.t1 | AT3G47060 | 38.824 | 170 | 89 | 3 | 150 | 313 | 337 | 497 | 7.24e-29 | 117 |
MS.gene070036.t1 | AT5G43010 | 38.378 | 185 | 100 | 4 | 142 | 321 | 144 | 319 | 2.46e-28 | 113 |
MS.gene070036.t1 | AT1G45000 | 39.444 | 180 | 95 | 4 | 142 | 316 | 144 | 314 | 2.70e-28 | 113 |
MS.gene070036.t1 | AT2G29080 | 37.126 | 167 | 91 | 3 | 152 | 313 | 336 | 493 | 5.86e-28 | 114 |
MS.gene070036.t1 | AT1G07510 | 36.905 | 168 | 91 | 3 | 152 | 313 | 341 | 499 | 7.51e-28 | 114 |
MS.gene070036.t1 | AT5G64580 | 36.047 | 172 | 96 | 3 | 150 | 315 | 328 | 491 | 5.97e-26 | 108 |
MS.gene070036.t1 | AT3G16290 | 38.462 | 169 | 88 | 4 | 150 | 312 | 422 | 580 | 1.67e-25 | 107 |
MS.gene070036.t1 | AT5G58290 | 39.333 | 150 | 77 | 3 | 172 | 316 | 190 | 330 | 1.78e-24 | 102 |
MS.gene070036.t1 | AT3G05530 | 36.000 | 175 | 98 | 3 | 146 | 315 | 180 | 345 | 1.20e-23 | 100 |
MS.gene070036.t1 | AT1G53750 | 35.294 | 170 | 96 | 3 | 157 | 321 | 188 | 348 | 1.30e-23 | 100 |
MS.gene070036.t1 | AT5G19990 | 35.758 | 165 | 91 | 3 | 157 | 315 | 123 | 278 | 2.13e-23 | 99.4 |
MS.gene070036.t1 | AT1G09100 | 36.000 | 175 | 98 | 4 | 146 | 315 | 179 | 344 | 3.00e-23 | 99.8 |
MS.gene070036.t1 | AT5G03340 | 33.690 | 187 | 106 | 4 | 144 | 321 | 483 | 660 | 3.44e-23 | 100 |
MS.gene070036.t1 | AT5G03340 | 38.750 | 160 | 85 | 4 | 157 | 313 | 227 | 376 | 1.68e-22 | 98.6 |
MS.gene070036.t1 | AT5G20000 | 35.758 | 165 | 91 | 3 | 157 | 315 | 181 | 336 | 5.27e-23 | 99.0 |
MS.gene070036.t1 | AT5G19990 | 35.758 | 165 | 91 | 3 | 157 | 315 | 181 | 336 | 6.28e-23 | 98.6 |
MS.gene070036.t1 | AT5G19990 | 35.758 | 165 | 91 | 3 | 157 | 315 | 181 | 336 | 6.28e-23 | 98.6 |
MS.gene070036.t1 | AT3G09840 | 38.750 | 160 | 85 | 4 | 157 | 313 | 227 | 376 | 1.50e-22 | 98.6 |
MS.gene070036.t1 | AT3G09840 | 32.812 | 192 | 102 | 5 | 144 | 321 | 483 | 661 | 2.58e-22 | 98.2 |
MS.gene070036.t1 | AT3G53230 | 34.807 | 181 | 100 | 4 | 144 | 315 | 484 | 655 | 1.79e-22 | 98.6 |
MS.gene070036.t1 | AT3G53230 | 38.922 | 167 | 75 | 5 | 157 | 313 | 228 | 377 | 3.58e-22 | 97.8 |
MS.gene070036.t1 | AT1G53780 | 36.585 | 164 | 90 | 3 | 157 | 315 | 359 | 513 | 3.87e-22 | 97.4 |
MS.gene070036.t1 | AT1G53780 | 36.585 | 164 | 90 | 3 | 157 | 315 | 360 | 514 | 3.99e-22 | 97.4 |
MS.gene070036.t1 | AT1G53780 | 36.585 | 164 | 90 | 3 | 157 | 315 | 360 | 514 | 3.99e-22 | 97.4 |
MS.gene070036.t1 | AT1G53780 | 36.585 | 164 | 90 | 3 | 157 | 315 | 381 | 535 | 4.43e-22 | 97.1 |
MS.gene070036.t1 | AT1G50140 | 34.804 | 204 | 117 | 7 | 119 | 316 | 695 | 888 | 4.52e-22 | 97.4 |
MS.gene070036.t1 | AT1G50140 | 34.804 | 204 | 117 | 7 | 119 | 316 | 695 | 888 | 4.52e-22 | 97.4 |
MS.gene070036.t1 | AT1G50140 | 34.804 | 204 | 117 | 7 | 119 | 316 | 695 | 888 | 4.52e-22 | 97.4 |
MS.gene070036.t1 | AT1G50140 | 34.804 | 204 | 117 | 7 | 119 | 316 | 673 | 866 | 4.79e-22 | 97.4 |
MS.gene070036.t1 | AT1G50140 | 34.804 | 204 | 117 | 7 | 119 | 316 | 673 | 866 | 4.79e-22 | 97.4 |
MS.gene070036.t1 | AT3G01610 | 37.222 | 180 | 104 | 5 | 144 | 315 | 236 | 414 | 3.34e-21 | 94.7 |
MS.gene070036.t1 | AT3G01610 | 38.462 | 156 | 74 | 5 | 168 | 316 | 559 | 699 | 8.42e-15 | 75.5 |
MS.gene070036.t1 | AT3G01610 | 37.222 | 180 | 104 | 5 | 144 | 315 | 236 | 414 | 3.38e-21 | 94.7 |
MS.gene070036.t1 | AT3G01610 | 38.462 | 156 | 74 | 5 | 168 | 316 | 559 | 699 | 8.39e-15 | 75.5 |
MS.gene070036.t1 | AT3G56690 | 35.897 | 156 | 81 | 4 | 171 | 320 | 418 | 560 | 6.75e-21 | 94.0 |
MS.gene070036.t1 | AT3G56690 | 37.584 | 149 | 72 | 4 | 173 | 313 | 760 | 895 | 7.07e-21 | 94.0 |
MS.gene070036.t1 | AT1G64110 | 33.880 | 183 | 98 | 7 | 145 | 318 | 523 | 691 | 1.58e-20 | 92.8 |
MS.gene070036.t1 | AT5G52882 | 32.500 | 200 | 101 | 7 | 127 | 318 | 519 | 692 | 1.60e-20 | 92.8 |
MS.gene070036.t1 | AT1G64110 | 33.880 | 183 | 98 | 7 | 145 | 318 | 528 | 696 | 1.66e-20 | 92.8 |
MS.gene070036.t1 | AT1G64110 | 33.880 | 183 | 98 | 7 | 145 | 318 | 528 | 696 | 1.66e-20 | 92.8 |
MS.gene070036.t1 | AT1G64110 | 33.880 | 183 | 98 | 7 | 145 | 318 | 526 | 694 | 1.69e-20 | 92.8 |
MS.gene070036.t1 | AT1G64110 | 33.880 | 183 | 98 | 7 | 145 | 318 | 526 | 694 | 1.69e-20 | 92.8 |
MS.gene070036.t1 | AT3G19740 | 30.292 | 274 | 173 | 8 | 52 | 316 | 614 | 878 | 2.09e-20 | 92.4 |
MS.gene070036.t1 | AT4G28000 | 33.000 | 200 | 100 | 8 | 127 | 318 | 522 | 695 | 2.33e-20 | 92.4 |
MS.gene070036.t1 | AT4G28000 | 33.000 | 200 | 100 | 8 | 127 | 318 | 520 | 693 | 2.46e-20 | 92.0 |
MS.gene070036.t1 | AT4G28000 | 33.000 | 200 | 100 | 8 | 127 | 318 | 522 | 695 | 2.60e-20 | 92.0 |
MS.gene070036.t1 | AT4G24860 | 34.483 | 174 | 100 | 6 | 146 | 314 | 826 | 990 | 7.65e-20 | 90.9 |
MS.gene070036.t1 | AT4G24860 | 34.483 | 174 | 100 | 6 | 146 | 314 | 828 | 992 | 7.80e-20 | 90.9 |
MS.gene070036.t1 | AT4G24860 | 34.483 | 174 | 100 | 6 | 146 | 314 | 801 | 965 | 8.35e-20 | 90.9 |
MS.gene070036.t1 | AT4G24860 | 34.483 | 174 | 100 | 6 | 146 | 314 | 824 | 988 | 1.00e-19 | 90.5 |
MS.gene070036.t1 | AT4G29040 | 30.811 | 185 | 114 | 3 | 142 | 321 | 193 | 368 | 1.14e-19 | 89.4 |
MS.gene070036.t1 | AT1G45000 | 40.310 | 129 | 72 | 2 | 142 | 265 | 144 | 272 | 1.85e-19 | 87.8 |
MS.gene070036.t1 | AT2G20140 | 30.270 | 185 | 115 | 3 | 142 | 321 | 193 | 368 | 1.09e-18 | 86.7 |
MS.gene070036.t1 | AT1G02890 | 32.323 | 198 | 113 | 8 | 124 | 314 | 933 | 1116 | 1.45e-18 | 87.0 |
MS.gene070036.t1 | AT4G02480 | 34.463 | 177 | 98 | 7 | 145 | 314 | 970 | 1135 | 2.61e-18 | 86.3 |
MS.gene070036.t1 | AT1G05910 | 35.028 | 177 | 99 | 5 | 146 | 315 | 390 | 557 | 3.71e-18 | 85.9 |
MS.gene070036.t1 | AT1G03000 | 34.416 | 154 | 67 | 5 | 173 | 311 | 693 | 827 | 9.16e-18 | 84.7 |
MS.gene070036.t1 | AT3G04340 | 28.641 | 206 | 119 | 6 | 115 | 312 | 770 | 955 | 3.08e-17 | 83.2 |
MS.gene070036.t1 | AT1G80350 | 35.762 | 151 | 89 | 5 | 172 | 318 | 273 | 419 | 3.21e-16 | 79.7 |
MS.gene070036.t1 | AT2G34560 | 36.774 | 155 | 71 | 6 | 172 | 315 | 137 | 275 | 4.89e-16 | 78.6 |
MS.gene070036.t1 | AT2G34560 | 35.099 | 151 | 79 | 5 | 172 | 315 | 146 | 284 | 5.03e-16 | 78.6 |
MS.gene070036.t1 | AT5G08470 | 32.243 | 214 | 125 | 7 | 110 | 312 | 799 | 1003 | 1.18e-15 | 78.2 |
MS.gene070036.t1 | AT5G08470 | 32.243 | 214 | 125 | 7 | 110 | 312 | 808 | 1012 | 1.22e-15 | 78.2 |
MS.gene070036.t1 | AT2G03670 | 32.121 | 165 | 97 | 3 | 157 | 315 | 306 | 461 | 2.61e-15 | 77.0 |
MS.gene070036.t1 | AT2G03670 | 30.319 | 188 | 111 | 6 | 139 | 315 | 21 | 199 | 1.43e-14 | 74.7 |
MS.gene070036.t1 | AT2G45500 | 34.247 | 146 | 85 | 4 | 171 | 314 | 259 | 395 | 9.98e-15 | 75.1 |
MS.gene070036.t1 | AT3G15120 | 37.162 | 148 | 77 | 5 | 172 | 312 | 754 | 892 | 1.04e-14 | 75.5 |
MS.gene070036.t1 | AT2G45500 | 34.483 | 145 | 84 | 4 | 172 | 314 | 117 | 252 | 1.09e-14 | 74.3 |
MS.gene070036.t1 | AT2G45500 | 34.483 | 145 | 84 | 4 | 172 | 314 | 117 | 252 | 1.09e-14 | 74.3 |
MS.gene070036.t1 | AT2G45500 | 34.247 | 146 | 85 | 4 | 171 | 314 | 249 | 385 | 1.17e-14 | 74.7 |
MS.gene070036.t1 | AT3G15120 | 37.162 | 148 | 77 | 5 | 172 | 312 | 764 | 902 | 1.17e-14 | 75.5 |
MS.gene070036.t1 | AT2G03670 | 30.319 | 188 | 111 | 6 | 139 | 315 | 21 | 199 | 1.29e-14 | 74.7 |
MS.gene070036.t1 | AT2G27600 | 31.515 | 165 | 96 | 5 | 162 | 321 | 156 | 308 | 1.52e-14 | 74.3 |
MS.gene070036.t1 | AT2G45500 | 34.247 | 146 | 85 | 4 | 171 | 314 | 253 | 389 | 1.54e-14 | 74.3 |
MS.gene070036.t1 | AT3G27120 | 35.862 | 145 | 84 | 5 | 172 | 315 | 437 | 573 | 8.42e-14 | 72.4 |
MS.gene070036.t1 | AT4G27680 | 30.814 | 172 | 99 | 6 | 149 | 313 | 96 | 254 | 8.91e-14 | 72.0 |
MS.gene070036.t1 | AT5G53540 | 31.169 | 154 | 81 | 5 | 172 | 316 | 123 | 260 | 3.07e-13 | 70.5 |
MS.gene070036.t1 | AT4G04910 | 33.540 | 161 | 81 | 7 | 168 | 313 | 247 | 396 | 3.23e-12 | 67.8 |
MS.gene070036.t1 | AT4G04180 | 34.416 | 154 | 83 | 7 | 172 | 320 | 357 | 497 | 3.24e-12 | 67.8 |
MS.gene070036.t1 | AT4G04180 | 34.416 | 154 | 83 | 7 | 172 | 320 | 362 | 502 | 3.83e-12 | 67.4 |
Find 63 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTCAAGAAAGTAATTATA+AGG | 0.264668 | 8.2:+54361558 | None:intergenic |
AATTCTTATGAAGCAGTCTT+TGG | 0.309511 | 8.2:-54359313 | MS.gene070036:CDS |
TTATGCCGAAAATTTCATTC+TGG | 0.335256 | 8.2:-54359226 | MS.gene070036:intron |
TTGTGTTGGGAGGTGATGTT+TGG | 0.337030 | 8.2:-54358757 | MS.gene070036:CDS |
AAGTAATTATAAGGAAGTTT+AGG | 0.352651 | 8.2:+54361567 | None:intergenic |
AGAATTAGAATTAGTATTCC+AGG | 0.363680 | 8.2:+54359330 | None:intergenic |
GTATAATCAACTCTTCGATA+TGG | 0.405540 | 8.2:-54359250 | MS.gene070036:CDS |
AAAGGGATGTGAAGTTTGTT+CGG | 0.407161 | 8.2:-54358682 | MS.gene070036:CDS |
CTCAGGGAACAAGGGCTTTG+TGG | 0.408576 | 8.2:-54361617 | MS.gene070036:CDS |
TCTTGACAAACTTGATTGTT+CGG | 0.409158 | 8.2:-54361544 | MS.gene070036:CDS |
AAGGGATGTGAAGTTTGTTC+GGG | 0.411649 | 8.2:-54358681 | MS.gene070036:intron |
CTCTCTGGACCTCCAGGAAC+AGG | 0.416784 | 8.2:-54358574 | MS.gene070036:CDS |
GCTCTTCTTACACAGCTTGA+TGG | 0.419844 | 8.2:-54357888 | MS.gene070036:CDS |
ACCTCCCAACACAACTTCCT+TGG | 0.436830 | 8.2:+54358766 | None:intergenic |
TAACTCATCTGCTCTATTTG+TGG | 0.443794 | 8.2:+54357000 | None:intergenic |
TGTGTTGGGAGGTGATGTTT+GGG | 0.450638 | 8.2:-54358756 | MS.gene070036:CDS |
GTTTCACCAACATCTCCAAC+TGG | 0.454978 | 8.2:+54358800 | None:intergenic |
GATGAAATAGATGCCATTGC+TGG | 0.455159 | 8.2:-54357954 | MS.gene070036:CDS |
TCGCAAAGAAGCGGTAGAAA+AGG | 0.455970 | 8.2:-54361649 | MS.gene070036:CDS |
TCCTATGCAGTTCTATGAAA+GGG | 0.479855 | 8.2:-54358699 | MS.gene070036:CDS |
TTCTTACATTTCTCCTAGCA+AGG | 0.480933 | 8.2:+54358431 | None:intergenic |
TGTCAGCCAGTTGGAGATGT+TGG | 0.487312 | 8.2:-54358806 | MS.gene070036:intron |
GTTCTACTCTCTGGACCTCC+AGG | 0.488277 | 8.2:-54358580 | MS.gene070036:CDS |
ATGCAGGGTGTTCTACTCTC+TGG | 0.492986 | 8.2:-54358589 | MS.gene070036:intron |
ACAAGATGTTCTCCCTTGCT+AGG | 0.502381 | 8.2:-54358444 | MS.gene070036:CDS |
ATCCTATGCAGTTCTATGAA+AGG | 0.509346 | 8.2:-54358700 | MS.gene070036:CDS |
CGAGAACCACTCAGGGAACA+AGG | 0.515019 | 8.2:-54361626 | MS.gene070036:CDS |
AACTTACAACATATTCCAAT+GGG | 0.515225 | 8.2:+54359545 | None:intergenic |
GACTGGAAGTGATGTGCAGA+AGG | 0.529109 | 8.2:+54359289 | None:intergenic |
GATCTTGACTTTGTTCGACC+TGG | 0.536733 | 8.2:-54356977 | MS.gene070036:CDS |
TATGTCCAAGGAAGTTGTGT+TGG | 0.539123 | 8.2:-54358771 | MS.gene070036:CDS |
ATGTCCAAGGAAGTTGTGTT+GGG | 0.540932 | 8.2:-54358770 | MS.gene070036:CDS |
AGAAAAGGCGAGAACCACTC+AGG | 0.544479 | 8.2:-54361634 | MS.gene070036:CDS |
TAACTTACAACATATTCCAA+TGG | 0.550064 | 8.2:+54359544 | None:intergenic |
CTTCTTGTAAATAAAACGAC+TGG | 0.550190 | 8.2:+54359272 | None:intergenic |
TCTTACATTTCTCCTAGCAA+GGG | 0.552331 | 8.2:+54358432 | None:intergenic |
CAAAGCCCTTGTTCCCTGAG+TGG | 0.553540 | 8.2:+54361620 | None:intergenic |
TTTCATGTTTGTCAGCCAGT+TGG | 0.555272 | 8.2:-54358815 | MS.gene070036:intron |
TAAATATGACCGCTTGTCTG+AGG | 0.562830 | 8.2:+54357029 | None:intergenic |
CCGAGTATGTCTTCCAGCAA+TGG | 0.564173 | 8.2:+54357941 | None:intergenic |
AATGAAAGAAGGCTTCCCAT+TGG | 0.571027 | 8.2:-54359560 | MS.gene070036:CDS |
ATCGATCGTCGTCTATACAT+TGG | 0.574319 | 8.2:-54356950 | MS.gene070036:CDS |
AAATATGACCGCTTGTCTGA+GGG | 0.577863 | 8.2:+54357030 | None:intergenic |
GTGAAAAGAGTGGAGCAGCT+AGG | 0.577991 | 8.2:-54358471 | MS.gene070036:CDS |
AGACGACGATCGATTCGTCC+AGG | 0.587584 | 8.2:+54356959 | None:intergenic |
TCCCTTTCATAGAACTGCAT+AGG | 0.592627 | 8.2:+54358698 | None:intergenic |
CCGCTTGTCTGAGGGATACA+CGG | 0.599240 | 8.2:+54357038 | None:intergenic |
TGAAACAAAATCTATGTCCA+AGG | 0.602059 | 8.2:-54358783 | MS.gene070036:CDS |
AGGACACTTGCAAAACAAAG+TGG | 0.604423 | 8.2:-54358535 | MS.gene070036:CDS |
TTATACGTGACAATGAAAGA+AGG | 0.607611 | 8.2:-54359571 | MS.gene070036:CDS |
CTTTGTGGATAGCTAAGAGA+TGG | 0.607799 | 8.2:-54361602 | MS.gene070036:CDS |
TCATCCACAAATACAAAACA+AGG | 0.620729 | 8.2:+54357972 | None:intergenic |
TTCACAGATAGTGAAAAGAG+TGG | 0.621058 | 8.2:-54358481 | MS.gene070036:CDS |
AAATAGTCTTCGCAAAGAAG+CGG | 0.623119 | 8.2:-54361658 | MS.gene070036:CDS |
TGACAAACTTGATTGTTCGG+AGG | 0.624628 | 8.2:-54361541 | MS.gene070036:intron |
TGCTGGAAGACATACTCGGA+AGG | 0.639110 | 8.2:-54357937 | MS.gene070036:CDS |
ACTGGAAGTGATGTGCAGAA+GGG | 0.642819 | 8.2:+54359290 | None:intergenic |
CCGTGTATCCCTCAGACAAG+CGG | 0.643573 | 8.2:-54357038 | MS.gene070036:CDS |
TGTGGATAGCTAAGAGATGG+TGG | 0.643799 | 8.2:-54361599 | MS.gene070036:CDS |
CCATTGCTGGAAGACATACT+CGG | 0.657373 | 8.2:-54357941 | MS.gene070036:CDS |
GAAAAGGCGAGAACCACTCA+GGG | 0.663375 | 8.2:-54361633 | MS.gene070036:CDS |
GAGAACCACTCAGGGAACAA+GGG | 0.671715 | 8.2:-54361625 | MS.gene070036:CDS |
TCCAAGGAAGTTGTGTTGGG+AGG | 0.689756 | 8.2:-54358767 | MS.gene070036:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTACAACTTATATTTA+GGG | + | chr8.2:54360435-54360454 | None:intergenic | 10.0% |
!! | TTAAATTACAACTTATATTT+AGG | + | chr8.2:54360436-54360455 | None:intergenic | 10.0% |
!! | TTATTAAACTCAATATTATA+TGG | + | chr8.2:54357970-54357989 | None:intergenic | 10.0% |
!!! | GATATATAAATATTCTTTTA+AGG | + | chr8.2:54357114-54357133 | None:intergenic | 10.0% |
!!! | GTTTTTTTTTTTTTTTTTTG+AGG | + | chr8.2:54358405-54358424 | None:intergenic | 10.0% |
!! | ACATGAAAATAAATTAGTAA+TGG | + | chr8.2:54359760-54359779 | None:intergenic | 15.0% |
!! | ACTATTTATAAAACATATCT+AGG | + | chr8.2:54357794-54357813 | None:intergenic | 15.0% |
!! | AGAAAATGAATTAAAATCTT+AGG | - | chr8.2:54357284-54357303 | MS.gene070036:intron | 15.0% |
!! | ATAAGATTTAACTAGTTATA+AGG | + | chr8.2:54358897-54358916 | None:intergenic | 15.0% |
!! | GAAACATAAAATAAACATAA+GGG | - | chr8.2:54358188-54358207 | MS.gene070036:intron | 15.0% |
!! | TCATATCATATTATGTAAAT+AGG | - | chr8.2:54360778-54360797 | MS.gene070036:intron | 15.0% |
!! | TGAAACATAAAATAAACATA+AGG | - | chr8.2:54358187-54358206 | MS.gene070036:intron | 15.0% |
!! | TGAAATTTGTAATTATTGTA+TGG | - | chr8.2:54360744-54360763 | MS.gene070036:intron | 15.0% |
!!! | ACTTAAAACAATATTTTCAT+TGG | + | chr8.2:54359495-54359514 | None:intergenic | 15.0% |
!!! | ATGTTTTAAAAGTTTCAAAT+TGG | - | chr8.2:54357904-54357923 | MS.gene070036:CDS | 15.0% |
!!! | TATGAGAATTTTGAAAATTT+AGG | - | chr8.2:54357757-54357776 | MS.gene070036:intron | 15.0% |
!!! | TATTTTCAAAATTGTAATCA+AGG | + | chr8.2:54360348-54360367 | None:intergenic | 15.0% |
!!! | TTGAAACTTTTAAAACATAA+GGG | - | chr8.2:54358157-54358176 | MS.gene070036:intron | 15.0% |
!!! | TTGAAACTTTTAAAACATAA+GGG | + | chr8.2:54358176-54358157 | None:intergenic | 15.0% |
!!! | TTGAAAGTTTTAAAACAAAA+GGG | + | chr8.2:54357873-54357892 | None:intergenic | 15.0% |
!!! | TTTGAAACTTTTAAAACATA+AGG | + | chr8.2:54357903-54357922 | None:intergenic | 15.0% |
!! | AAATGATAAGACGAAAATAA+AGG | + | chr8.2:54361430-54361449 | None:intergenic | 20.0% |
!! | AAGTAATTATAAGGAAGTTT+AGG | + | chr8.2:54357023-54357042 | None:intergenic | 20.0% |
!! | ATGCAAAATTGTTCTTAAAA+TGG | + | chr8.2:54361464-54361483 | None:intergenic | 20.0% |
!! | CAAAAACAAAAGAAATGAAA+AGG | + | chr8.2:54360240-54360259 | None:intergenic | 20.0% |
!! | GAAAATAAAGGAAATTAAGA+TGG | + | chr8.2:54361418-54361437 | None:intergenic | 20.0% |
!! | GAAATAATCTCAAAAAGATA+AGG | + | chr8.2:54359161-54359180 | None:intergenic | 20.0% |
!! | TAAAATATTTGATCTTTGCA+TGG | - | chr8.2:54359929-54359948 | MS.gene070036:intron | 20.0% |
!! | TTAAGGAAAGAGAATATAAA+GGG | + | chr8.2:54357097-54357116 | None:intergenic | 20.0% |
!! | TTGTCAAGAAAGTAATTATA+AGG | + | chr8.2:54357032-54357051 | None:intergenic | 20.0% |
!! | TTTAAGGAAAGAGAATATAA+AGG | + | chr8.2:54357098-54357117 | None:intergenic | 20.0% |
!!! | AAATGCTGTAATTTTGATTT+GGG | + | chr8.2:54359424-54359443 | None:intergenic | 20.0% |
!!! | AATTAAAATCTTAGGCTTTT+AGG | - | chr8.2:54357292-54357311 | MS.gene070036:intron | 20.0% |
!!! | ACAAATCCATTATTTTTTCA+AGG | - | chr8.2:54359217-54359236 | MS.gene070036:intron | 20.0% |
!!! | ATGTTTTAAAAGTTTCAAGT+TGG | + | chr8.2:54358155-54358174 | None:intergenic | 20.0% |
!!! | CAGAACAAAATCAAAATTTT+TGG | - | chr8.2:54361671-54361690 | MS.gene070036:CDS | 20.0% |
!!! | CTTGAAACTTTTAAAACATA+AGG | - | chr8.2:54358156-54358175 | MS.gene070036:intron | 20.0% |
!!! | CTTGAAAGTTTTAAAACAAA+AGG | + | chr8.2:54357874-54357893 | None:intergenic | 20.0% |
!!! | CTTTCTATTCAAGTATTTTT+AGG | + | chr8.2:54358232-54358251 | None:intergenic | 20.0% |
!!! | GTTTATTTTAAGTTTTAAGC+TGG | - | chr8.2:54357846-54357865 | MS.gene070036:intron | 20.0% |
!!! | GTTTATTTTATGTTTCATGT+TGG | + | chr8.2:54358184-54358203 | None:intergenic | 20.0% |
!!! | TAAATGCTGTAATTTTGATT+TGG | + | chr8.2:54359425-54359444 | None:intergenic | 20.0% |
!!! | TAACCATTTTTCTTTTAGTT+AGG | - | chr8.2:54361218-54361237 | MS.gene070036:intron | 20.0% |
!!! | TATATTTTAATCCCTACATT+AGG | - | chr8.2:54358341-54358360 | MS.gene070036:intron | 20.0% |
!!! | TGAAAATTTAGGATACAATA+TGG | - | chr8.2:54357768-54357787 | MS.gene070036:intron | 20.0% |
!!! | TTGTTTTAAAACTTTCAAGA+TGG | - | chr8.2:54357875-54357894 | MS.gene070036:intron | 20.0% |
!!! | TTTTTATGAATGATGGTAAT+GGG | + | chr8.2:54358472-54358491 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTGTCCGATAAA+TGG | - | chr8.2:54360293-54360312 | MS.gene070036:intron | 20.0% |
! | AAAATGATGACACTTGAATT+TGG | + | chr8.2:54361156-54361175 | None:intergenic | 25.0% |
! | AACATCTAAGTTCCATTTAT+CGG | + | chr8.2:54360308-54360327 | None:intergenic | 25.0% |
! | AACTTACAACATATTCCAAT+GGG | + | chr8.2:54359045-54359064 | None:intergenic | 25.0% |
! | ACAGGAAAAAAACAATAGAA+GGG | + | chr8.2:54361061-54361080 | None:intergenic | 25.0% |
! | AGAATTAGAATTAGTATTCC+AGG | + | chr8.2:54359260-54359279 | None:intergenic | 25.0% |
! | ATACAACCTCTATAATACTT+AGG | - | chr8.2:54357366-54357385 | MS.gene070036:intron | 25.0% |
! | ATAGGCAAAAAAACCAAATA+GGG | + | chr8.2:54361353-54361372 | None:intergenic | 25.0% |
! | ATAGGCTATTGTGTATAATT+TGG | - | chr8.2:54357153-54357172 | MS.gene070036:intron | 25.0% |
! | ATCATAAGATGTACATATGT+GGG | - | chr8.2:54357625-54357644 | MS.gene070036:intron | 25.0% |
! | ATGTATCCTATGAAAGATAA+GGG | + | chr8.2:54358555-54358574 | None:intergenic | 25.0% |
! | ATTAAGCTTAATTGCATGTT+TGG | - | chr8.2:54357815-54357834 | MS.gene070036:intron | 25.0% |
! | CCAAATTTAAATTCAGTATC+TGG | - | chr8.2:54359721-54359740 | MS.gene070036:intron | 25.0% |
! | CCAGATACTGAATTTAAATT+TGG | + | chr8.2:54359724-54359743 | None:intergenic | 25.0% |
! | GAACCTAACTAAAAGAAAAA+TGG | + | chr8.2:54361224-54361243 | None:intergenic | 25.0% |
! | GATCCAGTTATATTTATACT+AGG | - | chr8.2:54357525-54357544 | MS.gene070036:intron | 25.0% |
! | GATTTCAAAAAAGACAATGA+TGG | - | chr8.2:54360214-54360233 | MS.gene070036:intron | 25.0% |
! | GTTTGAGTATATGAAAAACA+CGG | - | chr8.2:54357330-54357349 | MS.gene070036:intron | 25.0% |
! | TAACTTACAACATATTCCAA+TGG | + | chr8.2:54359046-54359065 | None:intergenic | 25.0% |
! | TATCATAAGATGTACATATG+TGG | - | chr8.2:54357624-54357643 | MS.gene070036:intron | 25.0% |
! | TATGTATCCTATGAAAGATA+AGG | + | chr8.2:54358556-54358575 | None:intergenic | 25.0% |
! | TTAAGTCTGGAAAATTGAAT+TGG | - | chr8.2:54361281-54361300 | MS.gene070036:intron | 25.0% |
! | TTAGGCATTATATATGTTGA+GGG | + | chr8.2:54360497-54360516 | None:intergenic | 25.0% |
! | TTGAAACCTTATAAACTGTA+GGG | - | chr8.2:54359391-54359410 | MS.gene070036:intron | 25.0% |
! | TTTATTCCCTACAGTTTATA+AGG | + | chr8.2:54359400-54359419 | None:intergenic | 25.0% |
! | TTTGTTGATATCCTAATGTA+GGG | + | chr8.2:54358355-54358374 | None:intergenic | 25.0% |
!! | AATTTTCAACAAGTTAGGTT+AGG | - | chr8.2:54358923-54358942 | MS.gene070036:intron | 25.0% |
!! | AGAAAGTACAACTTATTTCA+AGG | + | chr8.2:54357946-54357965 | None:intergenic | 25.0% |
!! | CACAAAATTTTCAACAAGTT+AGG | - | chr8.2:54358918-54358937 | MS.gene070036:intron | 25.0% |
!! | CTTTTTATGAATGATGGTAA+TGG | + | chr8.2:54358473-54358492 | None:intergenic | 25.0% |
!! | GTATAATCTTTTCATGTCTT+CGG | + | chr8.2:54359002-54359021 | None:intergenic | 25.0% |
!! | TCATATGTTTGTTAGAAAAC+AGG | + | chr8.2:54358872-54358891 | None:intergenic | 25.0% |
!! | TGCTAAGAAATATATCCTTT+TGG | - | chr8.2:54358953-54358972 | MS.gene070036:intron | 25.0% |
!! | TTCTTTCTTTTTCTTTCTGT+AGG | - | chr8.2:54360590-54360609 | MS.gene070036:intron | 25.0% |
!! | TTTGAAACCTTATAAACTGT+AGG | - | chr8.2:54359390-54359409 | MS.gene070036:intron | 25.0% |
!! | TTTGAGATTATTTCGAATTC+TGG | - | chr8.2:54359167-54359186 | MS.gene070036:intron | 25.0% |
!! | TTTTGTTGATATCCTAATGT+AGG | + | chr8.2:54358356-54358375 | None:intergenic | 25.0% |
!!! | CTTTTGTTTTTGCTTAATCT+TGG | - | chr8.2:54360248-54360267 | MS.gene070036:intron | 25.0% |
!!! | GTGTTTTAAAAGTTTCAAGT+TGG | + | chr8.2:54358126-54358145 | None:intergenic | 25.0% |
!!! | TTTTATGAATGATGGTAATG+GGG | + | chr8.2:54358471-54358490 | None:intergenic | 25.0% |
AAAAATTGTCATCGGAGAAT+GGG | + | chr8.2:54360978-54360997 | None:intergenic | 30.0% | |
AAAATCCTAAGAGTTTACTG+TGG | + | chr8.2:54358789-54358808 | None:intergenic | 30.0% | |
AATAGCCTATACATACTGTT+TGG | + | chr8.2:54357143-54357162 | None:intergenic | 30.0% | |
AATTCTTATGAAGCAGTCTT+TGG | - | chr8.2:54359274-54359293 | MS.gene070036:CDS | 30.0% | |
ACATTTCATATACTCATGCA+TGG | + | chr8.2:54357253-54357272 | None:intergenic | 30.0% | |
AGTTCACCTAAGTATTATAG+AGG | + | chr8.2:54357375-54357394 | None:intergenic | 30.0% | |
ATGCAATTAATAGACACCAT+AGG | - | chr8.2:54358741-54358760 | MS.gene070036:CDS | 30.0% | |
ATGGTTAGAAATCTCATTCA+AGG | + | chr8.2:54361205-54361224 | None:intergenic | 30.0% | |
ATTCCAATGAAAGTAACGTT+TGG | - | chr8.2:54358098-54358117 | MS.gene070036:intron | 30.0% | |
CACAGGAAAAAAACAATAGA+AGG | + | chr8.2:54361062-54361081 | None:intergenic | 30.0% | |
CAGGAAAAAAACAATAGAAG+GGG | + | chr8.2:54361060-54361079 | None:intergenic | 30.0% | |
CATAGGCAAAAAAACCAAAT+AGG | + | chr8.2:54361354-54361373 | None:intergenic | 30.0% | |
CATTACTATTATCTGTCACA+AGG | + | chr8.2:54360395-54360414 | None:intergenic | 30.0% | |
CTTATACCCTTATCTTTCAT+AGG | - | chr8.2:54358546-54358565 | MS.gene070036:CDS | 30.0% | |
CTTCTTGTAAATAAAACGAC+TGG | + | chr8.2:54359318-54359337 | None:intergenic | 30.0% | |
GACTATACATTTGAAAGTTG+AGG | - | chr8.2:54358837-54358856 | MS.gene070036:intron | 30.0% | |
GATACATATGAGATACTTCA+CGG | + | chr8.2:54358590-54358609 | None:intergenic | 30.0% | |
GTATAATCAACTCTTCGATA+TGG | - | chr8.2:54359337-54359356 | MS.gene070036:CDS | 30.0% | |
GTGCCTAGTATAAATATAAC+TGG | + | chr8.2:54357531-54357550 | None:intergenic | 30.0% | |
GTTAGGCATTATATATGTTG+AGG | + | chr8.2:54360498-54360517 | None:intergenic | 30.0% | |
TAAGATGGCATCACATATAA+TGG | + | chr8.2:54361403-54361422 | None:intergenic | 30.0% | |
TAGAGTTAGTTCAAGTCTAA+TGG | - | chr8.2:54357208-54357227 | MS.gene070036:intron | 30.0% | |
TAGGCATTATATATGTTGAG+GGG | + | chr8.2:54360496-54360515 | None:intergenic | 30.0% | |
TCAAAAAGATAAGGATCAAG+AGG | + | chr8.2:54359152-54359171 | None:intergenic | 30.0% | |
TCATAAGATGTACATATGTG+GGG | - | chr8.2:54357626-54357645 | MS.gene070036:intron | 30.0% | |
TCATCCACAAATACAAAACA+AGG | + | chr8.2:54360618-54360637 | None:intergenic | 30.0% | |
TCGCAACCTTGAAAAAATAA+TGG | + | chr8.2:54359226-54359245 | None:intergenic | 30.0% | |
TCTTAGGTTTAAACAAAGTC+CGG | - | chr8.2:54357683-54357702 | MS.gene070036:intron | 30.0% | |
TCTTGACAAACTTGATTGTT+CGG | - | chr8.2:54357043-54357062 | MS.gene070036:CDS | 30.0% | |
TGAAACAAAATCTATGTCCA+AGG | - | chr8.2:54359804-54359823 | MS.gene070036:intron | 30.0% | |
TTATACGTGACAATGAAAGA+AGG | - | chr8.2:54359016-54359035 | MS.gene070036:intron | 30.0% | |
TTATGCCGAAAATTTCATTC+TGG | - | chr8.2:54359361-54359380 | MS.gene070036:intron | 30.0% | |
TTCCAATGAAAGTAACGTTT+GGG | - | chr8.2:54358099-54358118 | MS.gene070036:intron | 30.0% | |
TTCCTCTCAAAAAACTCTTA+TGG | + | chr8.2:54359544-54359563 | None:intergenic | 30.0% | |
TTTAGGCTTAATTGCATGTT+TGG | + | chr8.2:54358215-54358234 | None:intergenic | 30.0% | |
! | AAAAGCATGACTTGTAAGTT+TGG | - | chr8.2:54358488-54358507 | MS.gene070036:CDS | 30.0% |
! | AATGTAGTGTTCTTTTCTGT+TGG | - | chr8.2:54359621-54359640 | MS.gene070036:intron | 30.0% |
! | AGAAATATATCCTTTTGGAC+AGG | - | chr8.2:54358958-54358977 | MS.gene070036:intron | 30.0% |
! | CCTTACCAGAATGAAATTTT+CGG | + | chr8.2:54359369-54359388 | None:intergenic | 30.0% |
! | TCAATTTTCCAGACTTAACA+AGG | + | chr8.2:54361279-54361298 | None:intergenic | 30.0% |
! | TGAAGTATCTCATATGTATC+AGG | - | chr8.2:54358590-54358609 | MS.gene070036:intron | 30.0% |
! | TGACTTTTGTACTTGTCTTT+AGG | - | chr8.2:54361506-54361525 | MS.gene070036:intron | 30.0% |
! | TGAGAAGTATGTAATACCAT+AGG | + | chr8.2:54361371-54361390 | None:intergenic | 30.0% |
! | TTTTTACGATTTCCTATGTC+AGG | + | chr8.2:54360937-54360956 | None:intergenic | 30.0% |
!! | GTCATGCTTTTTATGAATGA+TGG | + | chr8.2:54358479-54358498 | None:intergenic | 30.0% |
!! | TTTGTTTTCCTTGTTAAGTC+TGG | - | chr8.2:54361268-54361287 | MS.gene070036:intron | 30.0% |
!! | TTTTGTACTTGTCTTTAGGA+AGG | - | chr8.2:54361510-54361529 | MS.gene070036:intron | 30.0% |
!!! | CAGAAAAGGTTTTAGAGAAA+TGG | - | chr8.2:54357496-54357515 | MS.gene070036:intron | 30.0% |
!!! | CTATTTGGTTTTTTTGCCTA+TGG | - | chr8.2:54361352-54361371 | MS.gene070036:intron | 30.0% |
!!! | TTGTCGACAATTTTTTGAAG+TGG | - | chr8.2:54359959-54359978 | MS.gene070036:intron | 30.0% |
!!! | TTTTGATTTTGTTCTGCATC+AGG | + | chr8.2:54361667-54361686 | None:intergenic | 30.0% |
AAAGTCCGGATATACAGTAT+GGG | - | chr8.2:54357697-54357716 | MS.gene070036:intron | 35.0% | |
AAATAGTCTTCGCAAAGAAG+CGG | - | chr8.2:54356929-54356948 | MS.gene070036:CDS | 35.0% | |
AATCGCAGTTGTATTAGAAG+TGG | + | chr8.2:54360198-54360217 | None:intergenic | 35.0% | |
AGATACTTCACGGATACAAT+CGG | + | chr8.2:54358580-54358599 | None:intergenic | 35.0% | |
AGATGTTGTTACACCCTATT+TGG | - | chr8.2:54361337-54361356 | MS.gene070036:intron | 35.0% | |
AGTTAGTTCAAGTCTAATGG+TGG | - | chr8.2:54357211-54357230 | MS.gene070036:intron | 35.0% | |
ATCCTATGCAGTTCTATGAA+AGG | - | chr8.2:54359887-54359906 | MS.gene070036:intron | 35.0% | |
CAAATCGGTAAGTTGTAACA+AGG | + | chr8.2:54361030-54361049 | None:intergenic | 35.0% | |
CATAAGATGTACATATGTGG+GGG | - | chr8.2:54357627-54357646 | MS.gene070036:intron | 35.0% | |
CATACTACTTGGAAACTAAG+AGG | + | chr8.2:54357180-54357199 | None:intergenic | 35.0% | |
CCGAAAATTTCATTCTGGTA+AGG | - | chr8.2:54359366-54359385 | MS.gene070036:intron | 35.0% | |
CTAATTGCATGCATACTACT+TGG | + | chr8.2:54357191-54357210 | None:intergenic | 35.0% | |
CTACCTTACATTGAAGTTTC+AGG | - | chr8.2:54361095-54361114 | MS.gene070036:intron | 35.0% | |
GAAAAATTGTCATCGGAGAA+TGG | + | chr8.2:54360979-54360998 | None:intergenic | 35.0% | |
GAACCTGAAACTTCAATGTA+AGG | + | chr8.2:54361101-54361120 | None:intergenic | 35.0% | |
GAAGGTTTCAATAGTGAAAG+TGG | - | chr8.2:54357660-54357679 | MS.gene070036:intron | 35.0% | |
GGTTGCTGAAAAATTGTCAT+CGG | + | chr8.2:54360986-54361005 | None:intergenic | 35.0% | |
GTAACACGATTCTTCTATGT+AGG | - | chr8.2:54359118-54359137 | MS.gene070036:intron | 35.0% | |
TAACAAGGTGGAAACCAAAA+AGG | + | chr8.2:54361015-54361034 | None:intergenic | 35.0% | |
TAACTCATCTGCTCTATTTG+TGG | + | chr8.2:54361590-54361609 | None:intergenic | 35.0% | |
TATGTATCCACCAATATCTG+CGG | - | chr8.2:54358662-54358681 | MS.gene070036:intron | 35.0% | |
TCAATAGTGAAAGTGGTCTT+AGG | - | chr8.2:54357667-54357686 | MS.gene070036:intron | 35.0% | |
TCATTTCATTCAATGAGTGC+TGG | - | chr8.2:54360532-54360551 | MS.gene070036:intron | 35.0% | |
TCCTATGCAGTTCTATGAAA+GGG | - | chr8.2:54359888-54359907 | MS.gene070036:intron | 35.0% | |
TCTGACCAAACAGTATGTAT+AGG | - | chr8.2:54357135-54357154 | MS.gene070036:intron | 35.0% | |
TCTTACATTTCTCCTAGCAA+GGG | + | chr8.2:54360158-54360177 | None:intergenic | 35.0% | |
TGGAAACCAAAAAGGAATCA+CGG | + | chr8.2:54361007-54361026 | None:intergenic | 35.0% | |
TGGCTAAGATGAACAAACAA+GGG | + | chr8.2:54359475-54359494 | None:intergenic | 35.0% | |
TTAATGACCAAACACATGCA+GGG | - | chr8.2:54359983-54360002 | MS.gene070036:intron | 35.0% | |
TTCACAGATAGTGAAAAGAG+TGG | - | chr8.2:54360106-54360125 | MS.gene070036:intron | 35.0% | |
TTCTTACATTTCTCCTAGCA+AGG | + | chr8.2:54360159-54360178 | None:intergenic | 35.0% | |
TTGGCTAAGATGAACAAACA+AGG | + | chr8.2:54359476-54359495 | None:intergenic | 35.0% | |
TTTAATGACCAAACACATGC+AGG | - | chr8.2:54359982-54360001 | MS.gene070036:intron | 35.0% | |
TTTCAACAAGTTAGGTTAGG+AGG | - | chr8.2:54358926-54358945 | MS.gene070036:intron | 35.0% | |
! | AAAGGGATGTGAAGTTTGTT+CGG | - | chr8.2:54359905-54359924 | MS.gene070036:intron | 35.0% |
! | ACGTAGAAAAGCAACTTTTG+AGG | - | chr8.2:54360677-54360696 | MS.gene070036:intron | 35.0% |
! | GATTATTTCGAATTCTGGAG+TGG | - | chr8.2:54359172-54359191 | MS.gene070036:intron | 35.0% |
! | GTCTTTAGGAAGGAAAAAAC+TGG | - | chr8.2:54361520-54361539 | MS.gene070036:intron | 35.0% |
! | TAAGGGTATAAGATGAGACT+AGG | + | chr8.2:54358538-54358557 | None:intergenic | 35.0% |
!! | AATGGATTTGTTGCTTCTGA+AGG | + | chr8.2:54359208-54359227 | None:intergenic | 35.0% |
!! | ATCAGCCTTTAAAACTTAGG+GGG | + | chr8.2:54359692-54359711 | None:intergenic | 35.0% |
!! | CAGGAAAAACACTTTTTGCA+AGG | - | chr8.2:54360032-54360051 | MS.gene070036:intron | 35.0% |
!! | CATCAGCCTTTAAAACTTAG+GGG | + | chr8.2:54359693-54359712 | None:intergenic | 35.0% |
!! | GCATCAGCCTTTAAAACTTA+GGG | + | chr8.2:54359694-54359713 | None:intergenic | 35.0% |
!! | GGATGTCTTTGAAACAGAAA+AGG | - | chr8.2:54357482-54357501 | MS.gene070036:intron | 35.0% |
!! | TGCATCAGCCTTTAAAACTT+AGG | + | chr8.2:54359695-54359714 | None:intergenic | 35.0% |
!!! | AAAAGTGTTTTTCCTGTTCC+TGG | + | chr8.2:54360028-54360047 | None:intergenic | 35.0% |
!!! | GGTTTTAGAGAAATGGTGTA+CGG | - | chr8.2:54357503-54357522 | MS.gene070036:intron | 35.0% |
!!! | GTCCATAAGAGTTTTTTGAG+AGG | - | chr8.2:54359539-54359558 | MS.gene070036:intron | 35.0% |
!!! | TCAAAAGTTGCTTTTCTACG+TGG | + | chr8.2:54360678-54360697 | None:intergenic | 35.0% |
AAACTTGATTGTTCGGAGGT+GGG | - | chr8.2:54357050-54357069 | MS.gene070036:CDS | 40.0% | |
AAAGACATCCTATCTACCCA+TGG | + | chr8.2:54357472-54357491 | None:intergenic | 40.0% | |
AAATATGACCGCTTGTCTGA+GGG | + | chr8.2:54361560-54361579 | None:intergenic | 40.0% | |
AATGAAAGAAGGCTTCCCAT+TGG | - | chr8.2:54359027-54359046 | MS.gene070036:intron | 40.0% | |
ACACTATATCACCACTACCA+TGG | - | chr8.2:54357452-54357471 | MS.gene070036:intron | 40.0% | |
ACTTAGGTGAACTGATGAGT+TGG | - | chr8.2:54357382-54357401 | MS.gene070036:intron | 40.0% | |
ACTTCAATGTAAGGTAGACC+AGG | + | chr8.2:54361092-54361111 | None:intergenic | 40.0% | |
AGAAGGGGTAGAGAACAAAT+CGG | + | chr8.2:54361045-54361064 | None:intergenic | 40.0% | |
AGGACACTTGCAAAACAAAG+TGG | - | chr8.2:54360052-54360071 | MS.gene070036:intron | 40.0% | |
AGGGTGTAACAACATCTACA+AGG | + | chr8.2:54361334-54361353 | None:intergenic | 40.0% | |
ATCGATCGTCGTCTATACAT+TGG | - | chr8.2:54361637-54361656 | MS.gene070036:CDS | 40.0% | |
ATCGGTAAGTTGTAACAAGG+TGG | + | chr8.2:54361027-54361046 | None:intergenic | 40.0% | |
ATGTATCCACCAATATCTGC+GGG | - | chr8.2:54358663-54358682 | MS.gene070036:intron | 40.0% | |
ATGTCCAAGGAAGTTGTGTT+GGG | - | chr8.2:54359817-54359836 | MS.gene070036:intron | 40.0% | |
CAAAGTCCGGATATACAGTA+TGG | - | chr8.2:54357696-54357715 | MS.gene070036:intron | 40.0% | |
CACTATATCACCACTACCAT+GGG | - | chr8.2:54357453-54357472 | MS.gene070036:intron | 40.0% | |
CTTAGGTGAACTGATGAGTT+GGG | - | chr8.2:54357383-54357402 | MS.gene070036:intron | 40.0% | |
CTTTGTGGATAGCTAAGAGA+TGG | - | chr8.2:54356985-54357004 | MS.gene070036:CDS | 40.0% | |
GATGAAATAGATGCCATTGC+TGG | - | chr8.2:54360633-54360652 | MS.gene070036:intron | 40.0% | |
GGTATAAGATGAGACTAGGT+TGG | + | chr8.2:54358534-54358553 | None:intergenic | 40.0% | |
TAAATATGACCGCTTGTCTG+AGG | + | chr8.2:54361561-54361580 | None:intergenic | 40.0% | |
TATGTCCAAGGAAGTTGTGT+TGG | - | chr8.2:54359816-54359835 | MS.gene070036:intron | 40.0% | |
TCCCTTTCATAGAACTGCAT+AGG | + | chr8.2:54359892-54359911 | None:intergenic | 40.0% | |
TGACAAACTTGATTGTTCGG+AGG | - | chr8.2:54357046-54357065 | MS.gene070036:CDS | 40.0% | |
TGGTATCTTCAACCTGACAT+AGG | - | chr8.2:54360922-54360941 | MS.gene070036:intron | 40.0% | |
TTGAGCTGTGTAACAGGATT+CGG | + | chr8.2:54358711-54358730 | None:intergenic | 40.0% | |
TTTACTGTGGCAGAGTTACT+TGG | + | chr8.2:54358776-54358795 | None:intergenic | 40.0% | |
TTTCATGTTTGTCAGCCAGT+TGG | - | chr8.2:54359772-54359791 | MS.gene070036:intron | 40.0% | |
! | AAGGGATGTGAAGTTTGTTC+GGG | - | chr8.2:54359906-54359925 | MS.gene070036:intron | 40.0% |
! | AGTGTTCTTTTCTGTTGGCA+AGG | - | chr8.2:54359626-54359645 | MS.gene070036:intron | 40.0% |
! | ATAAGATGAGACTAGGTTGG+TGG | + | chr8.2:54358531-54358550 | None:intergenic | 40.0% |
! | GATTCGGTTATGACAGTATC+CGG | + | chr8.2:54358695-54358714 | None:intergenic | 40.0% |
! | GTCCCAAACGTTACTTTCAT+TGG | + | chr8.2:54358104-54358123 | None:intergenic | 40.0% |
! | GTTGCGATTGCATTTTTACC+TGG | - | chr8.2:54359239-54359258 | MS.gene070036:CDS | 40.0% |
! | TGACAAGAGCTTAGAGTGTT+AGG | + | chr8.2:54360515-54360534 | None:intergenic | 40.0% |
! | TTCAAGTCTAATGGTGGTGA+GGG | - | chr8.2:54357217-54357236 | MS.gene070036:intron | 40.0% |
! | TTTTTCCTGTGAGAATCTCC+TGG | - | chr8.2:54361071-54361090 | MS.gene070036:intron | 40.0% |
!! | CATTGAAGTTTCAGGTTCAG+AGG | - | chr8.2:54361103-54361122 | MS.gene070036:intron | 40.0% |
!! | TCAGCCTTTAAAACTTAGGG+GGG | + | chr8.2:54359691-54359710 | None:intergenic | 40.0% |
!!! | CTGCCTTTTGTTTTTGCTTC+TGG | - | chr8.2:54360076-54360095 | MS.gene070036:intron | 40.0% |
!!! | GGCACCTTGTTTTGTATTTG+TGG | - | chr8.2:54360611-54360630 | MS.gene070036:intron | 40.0% |
AAGTTAGTCCCTCTGTCACT+TGG | + | chr8.2:54358078-54358097 | None:intergenic | 45.0% | |
ACAAGATGTTCTCCCTTGCT+AGG | - | chr8.2:54360143-54360162 | MS.gene070036:intron | 45.0% | |
ACAGCTTCTACCTGTCCAAA+AGG | + | chr8.2:54358971-54358990 | None:intergenic | 45.0% | |
ACTGGAAGTGATGTGCAGAA+GGG | + | chr8.2:54359300-54359319 | None:intergenic | 45.0% | |
ACTTGGCCATTTGGAGATCT+GGG | + | chr8.2:54358061-54358080 | None:intergenic | 45.0% | |
ATCCTATCTACCCATGGTAG+TGG | + | chr8.2:54357466-54357485 | None:intergenic | 45.0% | |
CAAACTTGATTGTTCGGAGG+TGG | - | chr8.2:54357049-54357068 | MS.gene070036:CDS | 45.0% | |
CCACACCCATACTGTATATC+CGG | + | chr8.2:54357705-54357724 | None:intergenic | 45.0% | |
CCATTGCTGGAAGACATACT+CGG | - | chr8.2:54360646-54360665 | MS.gene070036:intron | 45.0% | |
CGGATATACAGTATGGGTGT+GGG | - | chr8.2:54357703-54357722 | MS.gene070036:intron | 45.0% | |
CTCTGCCACAGTAAACTCTT+AGG | - | chr8.2:54358781-54358800 | MS.gene070036:CDS | 45.0% | |
GATCTTGACTTTGTTCGACC+TGG | - | chr8.2:54361610-54361629 | MS.gene070036:CDS | 45.0% | |
GCAGTTGTATTAGAAGTGGC+AGG | + | chr8.2:54360194-54360213 | None:intergenic | 45.0% | |
GCGCCAGAAGCAAAAACAAA+AGG | + | chr8.2:54360082-54360101 | None:intergenic | 45.0% | |
GCTCTTCTTACACAGCTTGA+TGG | - | chr8.2:54360699-54360718 | MS.gene070036:intron | 45.0% | |
GTTTCACCAACATCTCCAAC+TGG | + | chr8.2:54359790-54359809 | None:intergenic | 45.0% | |
TAAAAACTGTGCCTACCTGG+AGG | - | chr8.2:54360951-54360970 | MS.gene070036:intron | 45.0% | |
TACTTGGTTCATGCAGCCTA+TGG | + | chr8.2:54358760-54358779 | None:intergenic | 45.0% | |
TAGAACACCCTGCATGTGTT+TGG | + | chr8.2:54359993-54360012 | None:intergenic | 45.0% | |
TAGGCACATGAGCTGATCAA+TGG | - | chr8.2:54357544-54357563 | MS.gene070036:intron | 45.0% | |
TCGCAAAGAAGCGGTAGAAA+AGG | - | chr8.2:54356938-54356957 | MS.gene070036:CDS | 45.0% | |
TCGTAAAAACTGTGCCTACC+TGG | - | chr8.2:54360948-54360967 | MS.gene070036:intron | 45.0% | |
TCTCAACCCAGATCTCCAAA+TGG | - | chr8.2:54358052-54358071 | MS.gene070036:intron | 45.0% | |
TGTGGATAGCTAAGAGATGG+TGG | - | chr8.2:54356988-54357007 | MS.gene070036:CDS | 45.0% | |
TGTGTTGGGAGGTGATGTTT+GGG | - | chr8.2:54359831-54359850 | MS.gene070036:intron | 45.0% | |
TTGAGCTTGAGCTGTGTAAC+AGG | + | chr8.2:54358717-54358736 | None:intergenic | 45.0% | |
TTGTGTTGGGAGGTGATGTT+TGG | - | chr8.2:54359830-54359849 | MS.gene070036:intron | 45.0% | |
! | AGTGTTTTTCCTGTTCCTGG+AGG | + | chr8.2:54360025-54360044 | None:intergenic | 45.0% |
! | CAGCAACCGTGATTCCTTTT+TGG | - | chr8.2:54360998-54361017 | MS.gene070036:intron | 45.0% |
! | GTGAACTGATGAGTTGGGAA+AGG | - | chr8.2:54357388-54357407 | MS.gene070036:intron | 45.0% |
! | GTTCAAGTCTAATGGTGGTG+AGG | - | chr8.2:54357216-54357235 | MS.gene070036:intron | 45.0% |
!! | GTTGCCCCCCTAAGTTTTAA+AGG | - | chr8.2:54359684-54359703 | MS.gene070036:intron | 45.0% |
!! | TTAAAATATATAATGATTAT+AGG | + | chr8.2:54358331-54358350 | None:intergenic | 5.0% |
AAAAACCTCCGCGCATGTGA+TGG | - | chr8.2:54361177-54361196 | MS.gene070036:intron | 50.0% | |
ACATCACCCGCAGATATTGG+TGG | + | chr8.2:54358672-54358691 | None:intergenic | 50.0% | |
ACCTCCCAACACAACTTCCT+TGG | + | chr8.2:54359824-54359843 | None:intergenic | 50.0% | |
AGAAAAGGCGAGAACCACTC+AGG | - | chr8.2:54356953-54356972 | MS.gene070036:CDS | 50.0% | |
CAATATCTGCGGGTGATGTC+CGG | - | chr8.2:54358673-54358692 | MS.gene070036:intron | 50.0% | |
CACCACTACCATGGGTAGAT+AGG | - | chr8.2:54357461-54357480 | MS.gene070036:intron | 50.0% | |
CACTTGGCCATTTGGAGATC+TGG | + | chr8.2:54358062-54358081 | None:intergenic | 50.0% | |
CCAAATGGCCAAGTGACAGA+GGG | - | chr8.2:54358067-54358086 | MS.gene070036:intron | 50.0% | |
CCGAGTATGTCTTCCAGCAA+TGG | + | chr8.2:54360649-54360668 | None:intergenic | 50.0% | |
CCGGATATACAGTATGGGTG+TGG | - | chr8.2:54357702-54357721 | MS.gene070036:intron | 50.0% | |
GAAAAGGCGAGAACCACTCA+GGG | - | chr8.2:54356954-54356973 | MS.gene070036:CDS | 50.0% | |
GACTGGAAGTGATGTGCAGA+AGG | + | chr8.2:54359301-54359320 | None:intergenic | 50.0% | |
GAGAACCACTCAGGGAACAA+GGG | - | chr8.2:54356962-54356981 | MS.gene070036:CDS | 50.0% | |
GTAGACCAGGAGATTCTCAC+AGG | + | chr8.2:54361079-54361098 | None:intergenic | 50.0% | |
GTGAAAAGAGTGGAGCAGCT+AGG | - | chr8.2:54360116-54360135 | MS.gene070036:intron | 50.0% | |
GTGTTTGCAAGCAGTTCAGC+AGG | + | chr8.2:54361129-54361148 | None:intergenic | 50.0% | |
TCCAAATGGCCAAGTGACAG+AGG | - | chr8.2:54358066-54358085 | MS.gene070036:intron | 50.0% | |
TCCAAGGAAGTTGTGTTGGG+AGG | - | chr8.2:54359820-54359839 | MS.gene070036:intron | 50.0% | |
TGCTGGAAGACATACTCGGA+AGG | - | chr8.2:54360650-54360669 | MS.gene070036:intron | 50.0% | |
TGTCAGCCAGTTGGAGATGT+TGG | - | chr8.2:54359781-54359800 | MS.gene070036:intron | 50.0% | |
TGTGGGGGCAATGAACAAGA+AGG | - | chr8.2:54357642-54357661 | MS.gene070036:intron | 50.0% | |
! | AGTCTAATGGTGGTGAGGGT+CGG | - | chr8.2:54357221-54357240 | MS.gene070036:intron | 50.0% |
! | ATGCAGGGTGTTCTACTCTC+TGG | - | chr8.2:54359998-54360017 | MS.gene070036:intron | 50.0% |
CAAAGCCCTTGTTCCCTGAG+TGG | + | chr8.2:54356970-54356989 | None:intergenic | 55.0% | |
CCGCTTGTCTGAGGGATACA+CGG | + | chr8.2:54361552-54361571 | None:intergenic | 55.0% | |
CCGTGTATCCCTCAGACAAG+CGG | - | chr8.2:54361549-54361568 | MS.gene070036:CDS | 55.0% | |
CGAGAACCACTCAGGGAACA+AGG | - | chr8.2:54356961-54356980 | MS.gene070036:CDS | 55.0% | |
CGGACATCACCCGCAGATAT+TGG | + | chr8.2:54358675-54358694 | None:intergenic | 55.0% | |
CTCAGGGAACAAGGGCTTTG+TGG | - | chr8.2:54356970-54356989 | MS.gene070036:CDS | 55.0% | |
GTTCTACTCTCTGGACCTCC+AGG | - | chr8.2:54360007-54360026 | MS.gene070036:intron | 55.0% | |
! | CCCTCTGTCACTTGGCCATT+TGG | + | chr8.2:54358070-54358089 | None:intergenic | 55.0% |
!! | AGACGACGATCGATTCGTCC+AGG | + | chr8.2:54361631-54361650 | None:intergenic | 55.0% |
CATCGGAGAATGGGTCCTCC+AGG | + | chr8.2:54360969-54360988 | None:intergenic | 60.0% | |
CTCTCTGGACCTCCAGGAAC+AGG | - | chr8.2:54360013-54360032 | MS.gene070036:intron | 60.0% | |
GGAGAATGGGTCCTCCAGGT+AGG | + | chr8.2:54360965-54360984 | None:intergenic | 60.0% | |
! | TCAAGGCGCCATCACATGCG+CGG | + | chr8.2:54361188-54361207 | None:intergenic | 60.0% |
AGGCGCCATCACATGCGCGG+AGG | + | chr8.2:54361185-54361204 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 54356915 | 54361694 | 54356915 | ID=MS.gene070036 |
chr8.2 | mRNA | 54356915 | 54361694 | 54356915 | ID=MS.gene070036.t1;Parent=MS.gene070036 |
chr8.2 | exon | 54361542 | 54361694 | 54361542 | ID=MS.gene070036.t1.exon1;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54361542 | 54361694 | 54361542 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54359552 | 54359629 | 54359552 | ID=MS.gene070036.t1.exon2;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54359552 | 54359629 | 54359552 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54359227 | 54359370 | 54359227 | ID=MS.gene070036.t1.exon3;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54359227 | 54359370 | 54359227 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54358682 | 54358822 | 54358682 | ID=MS.gene070036.t1.exon4;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54358682 | 54358822 | 54358682 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54358438 | 54358605 | 54358438 | ID=MS.gene070036.t1.exon5;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54358438 | 54358605 | 54358438 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54357885 | 54357997 | 54357885 | ID=MS.gene070036.t1.exon6;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54357885 | 54357997 | 54357885 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
chr8.2 | exon | 54356915 | 54357081 | 54356915 | ID=MS.gene070036.t1.exon7;Parent=MS.gene070036.t1 |
chr8.2 | CDS | 54356915 | 54357081 | 54356915 | ID=cds.MS.gene070036.t1;Parent=MS.gene070036.t1 |
Gene Sequence |
Protein sequence |