Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072074.t1 | XP_003592931.1 | 99.6 | 723 | 3 | 0 | 95 | 817 | 160 | 882 | 0.00E+00 | 1360.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072074.t1 | Q6RHR6 | 99.6 | 723 | 3 | 0 | 95 | 817 | 160 | 882 | 0.0e+00 | 1360.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072074.t1 | G7IN96 | 99.6 | 723 | 3 | 0 | 95 | 817 | 160 | 882 | 0.0e+00 | 1360.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene072074 | -0.811595 | 6.47E-51 | -1.69E-46 |
MS.gene04932 | MS.gene072074 | 0.82497 | 6.05E-54 | -1.69E-46 |
MS.gene050338 | MS.gene072074 | 0.827263 | 1.72E-54 | -1.69E-46 |
MS.gene050444 | MS.gene072074 | -0.839671 | 1.38E-57 | -1.69E-46 |
MS.gene050577 | MS.gene072074 | -0.800299 | 1.54E-48 | -1.69E-46 |
MS.gene051422 | MS.gene072074 | 0.801825 | 7.50E-49 | -1.69E-46 |
MS.gene051651 | MS.gene072074 | 0.801713 | 7.91E-49 | -1.69E-46 |
MS.gene052129 | MS.gene072074 | 0.801549 | 8.54E-49 | -1.69E-46 |
MS.gene05240 | MS.gene072074 | 0.823919 | 1.07E-53 | -1.69E-46 |
MS.gene05244 | MS.gene072074 | 0.802529 | 5.37E-49 | -1.69E-46 |
MS.gene052503 | MS.gene072074 | -0.809644 | 1.71E-50 | -1.69E-46 |
MS.gene052702 | MS.gene072074 | 0.813972 | 1.95E-51 | -1.69E-46 |
MS.gene052823 | MS.gene072074 | -0.811883 | 5.60E-51 | -1.69E-46 |
MS.gene052825 | MS.gene072074 | -0.804053 | 2.60E-49 | -1.69E-46 |
MS.gene053420 | MS.gene072074 | 0.810408 | 1.17E-50 | -1.69E-46 |
MS.gene053421 | MS.gene072074 | 0.806758 | 7.04E-50 | -1.69E-46 |
MS.gene053480 | MS.gene072074 | -0.801116 | 1.05E-48 | -1.69E-46 |
MS.gene053632 | MS.gene072074 | -0.806072 | 9.82E-50 | -1.69E-46 |
MS.gene053776 | MS.gene072074 | 0.80177 | 7.70E-49 | -1.69E-46 |
MS.gene053916 | MS.gene072074 | -0.80065 | 1.30E-48 | -1.69E-46 |
MS.gene053920 | MS.gene072074 | 0.836152 | 1.11E-56 | -1.69E-46 |
MS.gene054706 | MS.gene072074 | 0.837235 | 5.86E-57 | -1.69E-46 |
MS.gene05470 | MS.gene072074 | -0.809603 | 1.74E-50 | -1.69E-46 |
MS.gene054742 | MS.gene072074 | 0.821029 | 5.02E-53 | -1.69E-46 |
MS.gene054941 | MS.gene072074 | 0.81845 | 1.95E-52 | -1.69E-46 |
MS.gene054965 | MS.gene072074 | 0.808906 | 2.46E-50 | -1.69E-46 |
MS.gene055502 | MS.gene072074 | -0.823362 | 1.44E-53 | -1.69E-46 |
MS.gene05589 | MS.gene072074 | -0.811841 | 5.72E-51 | -1.69E-46 |
MS.gene056387 | MS.gene072074 | -0.82775 | 1.32E-54 | -1.69E-46 |
MS.gene056504 | MS.gene072074 | -0.809272 | 2.05E-50 | -1.69E-46 |
MS.gene056590 | MS.gene072074 | 0.805457 | 1.32E-49 | -1.69E-46 |
MS.gene056591 | MS.gene072074 | 0.805567 | 1.25E-49 | -1.69E-46 |
MS.gene056688 | MS.gene072074 | 0.814698 | 1.35E-51 | -1.69E-46 |
MS.gene056692 | MS.gene072074 | -0.805117 | 1.56E-49 | -1.69E-46 |
MS.gene056697 | MS.gene072074 | 0.831152 | 1.96E-55 | -1.69E-46 |
MS.gene056856 | MS.gene072074 | 0.814304 | 1.65E-51 | -1.69E-46 |
MS.gene057261 | MS.gene072074 | 0.812551 | 4.01E-51 | -1.69E-46 |
MS.gene057658 | MS.gene072074 | -0.824224 | 9.06E-54 | -1.69E-46 |
MS.gene057717 | MS.gene072074 | 0.816958 | 4.23E-52 | -1.69E-46 |
MS.gene057857 | MS.gene072074 | -0.802352 | 5.84E-49 | -1.69E-46 |
MS.gene058067 | MS.gene072074 | 0.810443 | 1.15E-50 | -1.69E-46 |
MS.gene058382 | MS.gene072074 | 0.834422 | 3.02E-56 | -1.69E-46 |
MS.gene058419 | MS.gene072074 | -0.809292 | 2.03E-50 | -1.69E-46 |
MS.gene058838 | MS.gene072074 | -0.832938 | 7.10E-56 | -1.69E-46 |
MS.gene059023 | MS.gene072074 | -0.802521 | 5.39E-49 | -1.69E-46 |
MS.gene05926 | MS.gene072074 | 0.847902 | 8.62E-60 | -1.69E-46 |
MS.gene059315 | MS.gene072074 | 0.80234 | 5.88E-49 | -1.69E-46 |
MS.gene059677 | MS.gene072074 | -0.803292 | 3.74E-49 | -1.69E-46 |
MS.gene059953 | MS.gene072074 | 0.820631 | 6.19E-53 | -1.69E-46 |
MS.gene059955 | MS.gene072074 | 0.800723 | 1.26E-48 | -1.69E-46 |
MS.gene060405 | MS.gene072074 | 0.848027 | 7.96E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072074.t1 | MTR_2g005870 | 88.009 | 884 | 37 | 5 | 1 | 817 | 1 | 882 | 0.0 | 1523 |
MS.gene072074.t1 | MTR_2g005870 | 84.560 | 693 | 38 | 5 | 1 | 626 | 1 | 691 | 0.0 | 1140 |
MS.gene072074.t1 | MTR_7g117580 | 69.297 | 697 | 208 | 3 | 122 | 817 | 133 | 824 | 0.0 | 980 |
MS.gene072074.t1 | MTR_7g117580 | 74.536 | 593 | 149 | 2 | 226 | 817 | 9 | 600 | 0.0 | 891 |
MS.gene072074.t1 | MTR_7g117580 | 69.231 | 546 | 160 | 3 | 122 | 666 | 133 | 671 | 0.0 | 773 |
MS.gene072074.t1 | MTR_7g117580 | 68.966 | 406 | 122 | 1 | 122 | 527 | 133 | 534 | 0.0 | 590 |
MS.gene072074.t1 | MTR_1g076330 | 23.766 | 770 | 475 | 20 | 128 | 817 | 111 | 848 | 3.30e-50 | 190 |
MS.gene072074.t1 | MTR_1g076330 | 23.766 | 770 | 475 | 20 | 128 | 817 | 17 | 754 | 3.48e-50 | 189 |
MS.gene072074.t1 | MTR_1g076330 | 23.766 | 770 | 475 | 20 | 128 | 817 | 95 | 832 | 4.83e-50 | 189 |
MS.gene072074.t1 | MTR_1g076330 | 23.262 | 705 | 431 | 19 | 128 | 752 | 111 | 785 | 5.40e-41 | 162 |
MS.gene072074.t1 | MTR_1g076330 | 23.262 | 705 | 431 | 19 | 128 | 752 | 90 | 764 | 6.38e-41 | 161 |
MS.gene072074.t1 | MTR_1g076330 | 23.423 | 555 | 343 | 13 | 128 | 608 | 111 | 657 | 1.26e-36 | 147 |
MS.gene072074.t1 | MTR_1g076330 | 23.423 | 555 | 343 | 13 | 128 | 608 | 90 | 636 | 2.03e-36 | 147 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072074.t1 | AT5G49960 | 78.192 | 697 | 151 | 1 | 121 | 817 | 129 | 824 | 0.0 | 1112 |
MS.gene072074.t1 | AT5G49960 | 78.261 | 506 | 109 | 1 | 121 | 626 | 129 | 633 | 0.0 | 801 |
MS.gene072074.t1 | AT5G49960 | 78.416 | 505 | 108 | 1 | 121 | 625 | 129 | 632 | 0.0 | 801 |
MS.gene072074.t1 | AT5G02940 | 23.032 | 686 | 430 | 17 | 189 | 817 | 162 | 806 | 6.04e-48 | 183 |
MS.gene072074.t1 | AT5G43745 | 23.066 | 685 | 431 | 18 | 189 | 817 | 166 | 810 | 4.07e-47 | 181 |
MS.gene072074.t1 | AT5G02940 | 22.631 | 707 | 430 | 18 | 189 | 817 | 162 | 829 | 2.17e-45 | 176 |
Find 184 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATATCTTCTCTGGATATTT+AGG | 0.059109 | 2.4:+76310276 | None:intergenic |
AATTATAATTAGTGAAATTT+TGG | 0.103985 | 2.4:-76307522 | MS.gene072074:CDS |
ATACAAAGTCAACTTCTTTA+AGG | 0.121310 | 2.4:-76307604 | MS.gene072074:CDS |
TCAACTTCTTTAAGGTTATC+TGG | 0.148103 | 2.4:-76307596 | MS.gene072074:CDS |
CTGAAGCACTTTGGCATTCT+TGG | 0.155246 | 2.4:-76312023 | MS.gene072074:CDS |
TAAGCAACTCTCTTCTTTAA+TGG | 0.194129 | 2.4:+76312168 | None:intergenic |
ACCACCACCAACACTCTTAT+TGG | 0.207987 | 2.4:+76311588 | None:intergenic |
TTTCTATGATATAATGATTA+GGG | 0.234885 | 2.4:-76307102 | MS.gene072074:CDS |
AGAAGGTTTACAGGAGGTTT+GGG | 0.262952 | 2.4:+76312797 | None:intergenic |
TTAGCATTGTATGCGGTTAC+TGG | 0.270092 | 2.4:-76312057 | MS.gene072074:CDS |
TCCAATTCCATTGTTATCAT+TGG | 0.279469 | 2.4:+76312940 | None:intergenic |
ACTTTCTTTCTTATAGCATT+TGG | 0.285380 | 2.4:-76312084 | MS.gene072074:CDS |
ATATCTTCTCTGGATATTTA+GGG | 0.299093 | 2.4:+76310277 | None:intergenic |
GTTTCTATGATATAATGATT+AGG | 0.302034 | 2.4:-76307103 | MS.gene072074:CDS |
AAGAAGGTTTACAGGAGGTT+TGG | 0.311078 | 2.4:+76312796 | None:intergenic |
CCCAATGATAACAATGGAAT+TGG | 0.314539 | 2.4:-76312941 | MS.gene072074:CDS |
CTTATATTTGCCATGATGCT+TGG | 0.316969 | 2.4:-76311913 | MS.gene072074:CDS |
CCTTGGCTGGAGTGACAAAT+TGG | 0.326021 | 2.4:-76311806 | MS.gene072074:intron |
TAATACATAATCACTTATTC+TGG | 0.330596 | 2.4:+76307469 | None:intergenic |
CTGACTCATCTGCAAGAATA+AGG | 0.331840 | 2.4:+76307844 | None:intergenic |
TAGCTTTGCATAAGGATATA+TGG | 0.335862 | 2.4:+76312125 | None:intergenic |
CATGATGCTTGGGCTTGTTT+CGG | 0.347132 | 2.4:-76311902 | MS.gene072074:CDS |
TTTACAGGAGGTTTGGGAGG+AGG | 0.349529 | 2.4:+76312803 | None:intergenic |
CTCAAGAAATTAATTATTTG+AGG | 0.355978 | 2.4:+76312219 | None:intergenic |
GTTGTTGCACATGATGTAAT+TGG | 0.366075 | 2.4:-76311040 | MS.gene072074:CDS |
CCAATTCCATTGTTATCATT+GGG | 0.370133 | 2.4:+76312941 | None:intergenic |
ACAAGAAAGGAGATTGTTAT+AGG | 0.370174 | 2.4:-76307074 | MS.gene072074:CDS |
TTATATTTGCCATGATGCTT+GGG | 0.370290 | 2.4:-76311912 | MS.gene072074:CDS |
ACAGGAGGTTTGGGAGGAGG+AGG | 0.371831 | 2.4:+76312806 | None:intergenic |
ATGACCTCTGGCAGTGGGCC+TGG | 0.374256 | 2.4:+76310581 | None:intergenic |
TCCATTGTTATCATTGGGAT+TGG | 0.382263 | 2.4:+76312946 | None:intergenic |
CTGAAGCTTGCTGCATTTCG+CGG | 0.383020 | 2.4:+76307552 | None:intergenic |
TTCTTTCTTATAGCATTTGG+TGG | 0.392754 | 2.4:-76312081 | MS.gene072074:CDS |
AAAGCTCGAATTCGATTTCA+TGG | 0.392854 | 2.4:-76311512 | MS.gene072074:CDS |
GGAGGTTTGGGAGGAGGAGG+AGG | 0.393160 | 2.4:+76312809 | None:intergenic |
CAGATATGGGAGGACATTCT+AGG | 0.399782 | 2.4:-76310815 | MS.gene072074:CDS |
CCACAAAACAATATCTTCTC+TGG | 0.406015 | 2.4:+76310267 | None:intergenic |
GCTTGTTTCGGATGCTATAT+CGG | 0.406162 | 2.4:-76311890 | MS.gene072074:CDS |
ACCACGGCAATACCTTCTTT+AGG | 0.407676 | 2.4:+76311443 | None:intergenic |
TGGAACTACCCTTCTTTCCT+TGG | 0.409640 | 2.4:-76312866 | MS.gene072074:CDS |
TGGCCCCTGGTTCAGAACTC+TGG | 0.410692 | 2.4:-76308379 | MS.gene072074:CDS |
AGAGTTGTTCTTAGCTTAGC+TGG | 0.415399 | 2.4:-76311160 | MS.gene072074:CDS |
GGAAAAGGAGGAAATGGAAA+TGG | 0.419814 | 2.4:-76311542 | MS.gene072074:CDS |
AAAAGAAGATCATCCAGTTC+AGG | 0.420879 | 2.4:+76310758 | None:intergenic |
TACCCTTCTTTCCTTGGCAT+TGG | 0.429924 | 2.4:-76312860 | MS.gene072074:CDS |
TTAGAAGCATTCTTGGCCCC+TGG | 0.430654 | 2.4:-76308392 | MS.gene072074:CDS |
CTCAGAACATAATTATCATC+TGG | 0.433266 | 2.4:+76310653 | None:intergenic |
AGAAAAGGAAAAGGAGGAAA+TGG | 0.437214 | 2.4:-76311548 | MS.gene072074:CDS |
CCATTGTTATCATTGGGATT+GGG | 0.438475 | 2.4:+76312947 | None:intergenic |
CAACTTCTTTAAGGTTATCT+GGG | 0.440114 | 2.4:-76307595 | MS.gene072074:CDS |
AGAAAGATGACCTCTGGCAG+TGG | 0.445575 | 2.4:+76310575 | None:intergenic |
TCTGCAGCCTGGCCTTGCAC+AGG | 0.447407 | 2.4:-76310996 | MS.gene072074:intron |
CTCAAATAATTAATTTCTTG+AGG | 0.448844 | 2.4:-76312218 | MS.gene072074:CDS |
TTTAGGTCAGCAAGTATAAG+TGG | 0.454048 | 2.4:+76311460 | None:intergenic |
TATTGTGGTGCTTGCAGAAA+AGG | 0.454979 | 2.4:-76311563 | MS.gene072074:CDS |
TGCAATACCGTGTGGAGTTA+AGG | 0.457759 | 2.4:-76310708 | MS.gene072074:CDS |
GTTCAATGAAGTTCCTGAAA+AGG | 0.458434 | 2.4:-76308354 | MS.gene072074:CDS |
TGCGGACGAAAATGCAGATC+AGG | 0.458571 | 2.4:-76311301 | MS.gene072074:intron |
AGGTTTACAGGAGGTTTGGG+AGG | 0.459490 | 2.4:+76312800 | None:intergenic |
TCTGCTCATTCGTGATATAC+AGG | 0.460932 | 2.4:-76307775 | MS.gene072074:intron |
AAGGTTGATTCACTTAGAAA+AGG | 0.461974 | 2.4:-76311865 | MS.gene072074:CDS |
TGCCATGCTAACCAGCTCAT+TGG | 0.468077 | 2.4:+76307445 | None:intergenic |
ATTCAGTGTGCTCTGCAGCC+TGG | 0.470047 | 2.4:-76311007 | MS.gene072074:CDS |
CTGGGTTCTCTCACAACTCA+TGG | 0.470879 | 2.4:-76307577 | MS.gene072074:CDS |
TTGAGACAGAGACGATTCTC+TGG | 0.472906 | 2.4:+76311953 | None:intergenic |
GTCTTTGTCTTCTTCAAAGG+TGG | 0.473189 | 2.4:+76313007 | None:intergenic |
GGTTGATAATAGCACGCTCT+TGG | 0.476030 | 2.4:+76307036 | None:intergenic |
TCAAATAAATAGAACTCTGC+TGG | 0.479224 | 2.4:+76307140 | None:intergenic |
TCCACCAACAAGTTTCACTA+AGG | 0.479326 | 2.4:+76311078 | None:intergenic |
AGTGTCTTTGTCTTCTTCAA+AGG | 0.479615 | 2.4:+76313004 | None:intergenic |
TGTTGGTGGTGGTGTTATTG+TGG | 0.482644 | 2.4:-76311578 | MS.gene072074:CDS |
AATGATAACAATGGAATTGG+AGG | 0.485114 | 2.4:-76312938 | MS.gene072074:CDS |
ACTCCACACGGTATTGCATC+AGG | 0.485239 | 2.4:+76310713 | None:intergenic |
GGGAGGGAAATGCTGTCATT+AGG | 0.491865 | 2.4:-76308262 | MS.gene072074:CDS |
TGAGGAATTATTTGCGGAGG+AGG | 0.492037 | 2.4:-76307381 | MS.gene072074:intron |
TAGCACGCTCTTGGTTGGCC+AGG | 0.499437 | 2.4:+76307045 | None:intergenic |
CTGCCAATGCCAAGGAAAGA+AGG | 0.501340 | 2.4:+76312857 | None:intergenic |
AAAGAAGAGAGTTGCTTACA+TGG | 0.501537 | 2.4:-76312163 | MS.gene072074:CDS |
AGAAACCATGTACTCATCCT+TGG | 0.502400 | 2.4:-76311823 | MS.gene072074:CDS |
TGTTCTTGAGGAATTATTTG+CGG | 0.504667 | 2.4:-76307387 | MS.gene072074:CDS |
AGATATTTGTACAATACAAA+AGG | 0.505733 | 2.4:+76312252 | None:intergenic |
GAACATAAAGCTTGTCCACC+GGG | 0.509140 | 2.4:-76308282 | MS.gene072074:CDS |
TAATGACAGCATTTCCCTCC+CGG | 0.510963 | 2.4:+76308264 | None:intergenic |
TTTCAAGCTTACAGAATCAA+AGG | 0.516141 | 2.4:+76308211 | None:intergenic |
CATGCTGAAACAGAAGGAAC+CGG | 0.517105 | 2.4:-76311976 | MS.gene072074:CDS |
GATAATAGCACGCTCTTGGT+TGG | 0.517883 | 2.4:+76307040 | None:intergenic |
GACAGAGACGATTCTCTGGC+CGG | 0.519822 | 2.4:+76311957 | None:intergenic |
GGTGTAAAGGAGGGCTTAAG+AGG | 0.521084 | 2.4:-76311139 | MS.gene072074:CDS |
GGTTAGCATGGCACTAGCTA+TGG | 0.522446 | 2.4:-76307435 | MS.gene072074:CDS |
GTCTCTGTCTCAATTAGTGC+GGG | 0.527792 | 2.4:-76311943 | MS.gene072074:CDS |
AGTGCAAGTAGCTTTGCATA+AGG | 0.528370 | 2.4:+76312117 | None:intergenic |
TCACTAAGGGTTCATTGTCA+AGG | 0.529087 | 2.4:+76311092 | None:intergenic |
ACCATGTACTCATCCTTGGC+TGG | 0.529647 | 2.4:-76311819 | MS.gene072074:CDS |
TCTTAGCTTAGCTGGTGTAA+AGG | 0.530755 | 2.4:-76311152 | MS.gene072074:CDS |
CTTAAGAGGGCATGTTGTTG+TGG | 0.531530 | 2.4:-76311125 | MS.gene072074:CDS |
GATTAGGGGTCGTACAAGAA+AGG | 0.535337 | 2.4:-76307087 | MS.gene072074:CDS |
TTTGCAGGTTTCAGTTTCAA+AGG | 0.535429 | 2.4:-76311346 | MS.gene072074:intron |
ATAATAACCTGTGCAAGGCC+AGG | 0.537231 | 2.4:+76310989 | None:intergenic |
AAGCTCGAATTCGATTTCAT+GGG | 0.539520 | 2.4:-76311511 | MS.gene072074:CDS |
AAGAAGTTGACTTTGTATCT+CGG | 0.540652 | 2.4:+76307609 | None:intergenic |
CCCAATCCCAATGATAACAA+TGG | 0.542728 | 2.4:-76312947 | MS.gene072074:CDS |
GTTGACTTTGTATCTCGGTA+TGG | 0.542760 | 2.4:+76307614 | None:intergenic |
TTATGTATTATCCAATGAGC+TGG | 0.542940 | 2.4:-76307456 | MS.gene072074:CDS |
ATCCAATGAGCTGGTTAGCA+TGG | 0.544583 | 2.4:-76307447 | MS.gene072074:CDS |
CGAAACAAGCCCAAGCATCA+TGG | 0.544799 | 2.4:+76311903 | None:intergenic |
TTCGGATGCTATATCGGAGA+AGG | 0.545084 | 2.4:-76311884 | MS.gene072074:CDS |
GGAGTTAAGGTTGCTGCAGA+TGG | 0.546450 | 2.4:-76310695 | MS.gene072074:CDS |
GCACCTCGAGAGTCTTCCAT+TGG | 0.547151 | 2.4:-76308237 | MS.gene072074:CDS |
GATGATGACACTTATGCTCC+AGG | 0.548929 | 2.4:-76310599 | MS.gene072074:CDS |
GCAAATCAACCGTGTTCTTG+AGG | 0.553682 | 2.4:-76307399 | MS.gene072074:CDS |
CCAATTTGTCACTCCAGCCA+AGG | 0.555174 | 2.4:+76311806 | None:intergenic |
TCCAGCCAAGGATGAGTACA+TGG | 0.556904 | 2.4:+76311818 | None:intergenic |
AGCTTAGCTGGTGTAAAGGA+GGG | 0.557700 | 2.4:-76311148 | MS.gene072074:CDS |
AGAGAGAAGAAACTTGCTGC+TGG | 0.559189 | 2.4:-76308329 | MS.gene072074:CDS |
TGGACTTATGTAGCTGACGC+AGG | 0.560225 | 2.4:-76312003 | MS.gene072074:CDS |
TTGTTATCATTGGGATTGGG+AGG | 0.560797 | 2.4:+76312950 | None:intergenic |
GAACCCTTAGTGAAACTTGT+TGG | 0.562552 | 2.4:-76311082 | MS.gene072074:CDS |
TGCTCCAGGCCCACTGCCAG+AGG | 0.562564 | 2.4:-76310585 | MS.gene072074:intron |
GCAATAGCCAATAAGAGTGT+TGG | 0.565769 | 2.4:-76311595 | MS.gene072074:CDS |
GTAGCATGGCTGAAGCACTT+TGG | 0.566874 | 2.4:-76312032 | MS.gene072074:CDS |
TAGCTTAGCTGGTGTAAAGG+AGG | 0.568499 | 2.4:-76311149 | MS.gene072074:CDS |
TTTGAATAATAACCTGTGCA+AGG | 0.569894 | 2.4:+76310984 | None:intergenic |
AGCATAAGTGTCATCATCCT+CGG | 0.571380 | 2.4:+76310604 | None:intergenic |
TTTCTTCTGTCATTCACCTG+AGG | 0.571440 | 2.4:+76306956 | None:intergenic |
CATAGAAACAGAGCTCCTCC+TGG | 0.574441 | 2.4:+76307117 | None:intergenic |
CGTCTCTGTCTCAATTAGTG+CGG | 0.576293 | 2.4:-76311944 | MS.gene072074:CDS |
AACATCCAGAGTTCTGAACC+AGG | 0.577266 | 2.4:+76308374 | None:intergenic |
TGCGGTTACTGGCGGTAGCA+TGG | 0.578720 | 2.4:-76312046 | MS.gene072074:CDS |
CCACCAACAAGTTTCACTAA+GGG | 0.579441 | 2.4:+76311079 | None:intergenic |
ATAGCCAATAAGAGTGTTGG+TGG | 0.580251 | 2.4:-76311592 | MS.gene072074:CDS |
TATACTTGCTGACCTAAAGA+AGG | 0.580516 | 2.4:-76311455 | MS.gene072074:intron |
CTGATTTCTCACAACAACAA+TGG | 0.580629 | 2.4:-76312886 | MS.gene072074:CDS |
AGAGTTCTATTTATTTGACC+AGG | 0.581048 | 2.4:-76307135 | MS.gene072074:CDS |
TATCTTCTCTGGATATTTAG+GGG | 0.582060 | 2.4:+76310278 | None:intergenic |
ACAGAATCAAAGGTCTCCAA+TGG | 0.582556 | 2.4:+76308221 | None:intergenic |
GGTGCTTGCAGAAAAGGAAA+AGG | 0.582960 | 2.4:-76311557 | MS.gene072074:CDS |
CCCTTAGTGAAACTTGTTGG+TGG | 0.584889 | 2.4:-76311079 | MS.gene072074:CDS |
AATGAGCAGAAGAGTAGCAA+GGG | 0.586121 | 2.4:+76307788 | None:intergenic |
GATTGTTATAGGCTATCGCC+TGG | 0.588095 | 2.4:-76307063 | MS.gene072074:CDS |
ATAGTTTGTATAGGTACGCA+AGG | 0.589814 | 2.4:-76310325 | MS.gene072074:intron |
GATAATTATGTTCTGAGAGA+TGG | 0.589999 | 2.4:-76310647 | MS.gene072074:CDS |
AGAACATAAAGCTTGTCCAC+CGG | 0.590018 | 2.4:-76308283 | MS.gene072074:CDS |
GGAAATCATGCTGAAACAGA+AGG | 0.590406 | 2.4:-76311982 | MS.gene072074:CDS |
ATCTTCTCTGGATATTTAGG+GGG | 0.591558 | 2.4:+76310279 | None:intergenic |
TTAAGGTTGCTGCAGATGGT+GGG | 0.594100 | 2.4:-76310691 | MS.gene072074:CDS |
GTTAAGGTTGCTGCAGATGG+TGG | 0.598502 | 2.4:-76310692 | MS.gene072074:CDS |
GCCAATAAGAGTGTTGGTGG+TGG | 0.599916 | 2.4:-76311589 | MS.gene072074:CDS |
TGGAGGTGCTGCCAATGCCA+AGG | 0.600631 | 2.4:+76312849 | None:intergenic |
TTCTCTTGGCCAGATATGGG+AGG | 0.602546 | 2.4:-76310825 | MS.gene072074:intron |
GAAAGATGACCTCTGGCAGT+GGG | 0.604023 | 2.4:+76310576 | None:intergenic |
GTTCTATTTATTTGACCAGG+AGG | 0.607329 | 2.4:-76307132 | MS.gene072074:CDS |
CATCATCCTCGGCTATGACA+AGG | 0.607741 | 2.4:+76310615 | None:intergenic |
TACGCAAGGGCTATTTCCCT+AGG | 0.609591 | 2.4:-76310311 | MS.gene072074:CDS |
TCTGTCTCAATTAGTGCGGG+TGG | 0.610747 | 2.4:-76311940 | MS.gene072074:CDS |
GAAACTCTGAGATTGAGAGA+AGG | 0.611019 | 2.4:+76312980 | None:intergenic |
ACATCTGTAATATGTAGAAG+TGG | 0.612683 | 2.4:-76311487 | MS.gene072074:CDS |
AGCTCGAATTCGATTTCATG+GGG | 0.614516 | 2.4:-76311510 | MS.gene072074:CDS |
TTCTATGATATAATGATTAG+GGG | 0.616535 | 2.4:-76307101 | MS.gene072074:CDS |
ATAAAGCTTGTCCACCGGGA+GGG | 0.622822 | 2.4:-76308278 | MS.gene072074:CDS |
TGATCATGTCATCAATGTCA+CGG | 0.624195 | 2.4:+76310238 | None:intergenic |
TGACATTGATGACATGATCA+TGG | 0.624426 | 2.4:-76310235 | MS.gene072074:intron |
GAATGAGCAGAAGAGTAGCA+AGG | 0.627455 | 2.4:+76307787 | None:intergenic |
TATTCTTGCAGATGAGTCAG+TGG | 0.627905 | 2.4:-76307841 | MS.gene072074:CDS |
TGCCAATGCCAAGGAAAGAA+GGG | 0.629280 | 2.4:+76312858 | None:intergenic |
TGGTGGTTTAGCATTGTATG+CGG | 0.643522 | 2.4:-76312064 | MS.gene072074:CDS |
GCATTGTATGCGGTTACTGG+CGG | 0.645593 | 2.4:-76312054 | MS.gene072074:CDS |
CGAAGTCCTTGTCATAGCCG+AGG | 0.647783 | 2.4:-76310621 | MS.gene072074:CDS |
GCTTGCAGAAAAGGAAAAGG+AGG | 0.649760 | 2.4:-76311554 | MS.gene072074:CDS |
CATCCAGAGTTCTGAACCAG+GGG | 0.651282 | 2.4:+76308376 | None:intergenic |
TCTTGCAGATGAGTCAGTGG+AGG | 0.653454 | 2.4:-76307838 | MS.gene072074:CDS |
AGGGAAATGCTGTCATTAGG+CGG | 0.655221 | 2.4:-76308259 | MS.gene072074:CDS |
CAAATAATTCCTCAAGAACA+CGG | 0.655970 | 2.4:+76307390 | None:intergenic |
GTGTAAAGGAGGGCTTAAGA+GGG | 0.656066 | 2.4:-76311138 | MS.gene072074:CDS |
TCTTGAGGAATTATTTGCGG+AGG | 0.658307 | 2.4:-76307384 | MS.gene072074:CDS |
TTTCCTGATGCAATACCGTG+TGG | 0.665352 | 2.4:-76310716 | MS.gene072074:CDS |
TAGTTTGTATAGGTACGCAA+GGG | 0.668580 | 2.4:-76310324 | MS.gene072074:intron |
GAGGAGAACAGAAAGTAACA+AGG | 0.670229 | 2.4:-76312199 | MS.gene072074:CDS |
TCTCCAATGGAAGACTCTCG+AGG | 0.672676 | 2.4:+76308234 | None:intergenic |
CATAAAGCTTGTCCACCGGG+AGG | 0.679617 | 2.4:-76308279 | MS.gene072074:CDS |
ACATCCAGAGTTCTGAACCA+GGG | 0.682226 | 2.4:+76308375 | None:intergenic |
GCAGCAACCTTAACTCCACA+CGG | 0.688231 | 2.4:+76310701 | None:intergenic |
TGACAGCATTTCCCTCCCGG+TGG | 0.690646 | 2.4:+76308267 | None:intergenic |
GATATGAAACTTCAACTCTG+TGG | 0.711737 | 2.4:-76312393 | MS.gene072074:CDS |
GAGAACAGAAAGTAACAAGG+AGG | 0.716342 | 2.4:-76312196 | MS.gene072074:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAATATAAACTTAATAAA+GGG | + | chr2.4:76307413-76307432 | None:intergenic | 10.0% |
!! | TATGAATATAAACTTAATAA+AGG | + | chr2.4:76307414-76307433 | None:intergenic | 10.0% |
!!! | AATTATAATTAGTGAAATTT+TGG | - | chr2.4:76312504-76312523 | MS.gene072074:intron | 10.0% |
!! | ATCAAAATGACATATAATAT+TGG | - | chr2.4:76312820-76312839 | MS.gene072074:CDS | 15.0% |
!! | CAAATTATTCAAACATTAAA+TGG | + | chr2.4:76309504-76309523 | None:intergenic | 15.0% |
!! | CATTTAATGTTTGAATAATT+TGG | - | chr2.4:76309502-76309521 | MS.gene072074:intron | 15.0% |
!! | GTTAAAGAACATAAAATATA+AGG | + | chr2.4:76311522-76311541 | None:intergenic | 15.0% |
!! | TACAAAAAACAAAAAAAAAG+AGG | + | chr2.4:76312379-76312398 | None:intergenic | 15.0% |
!! | TGATTATCATTATCAATTTA+TGG | - | chr2.4:76310404-76310423 | MS.gene072074:intron | 15.0% |
!! | TTAACAAGAATAATTAGAAT+TGG | - | chr2.4:76311103-76311122 | MS.gene072074:CDS | 15.0% |
!! | TTTCTATGATATAATGATTA+GGG | - | chr2.4:76312924-76312943 | MS.gene072074:CDS | 15.0% |
!!! | AGGTTTTTGTTTATTTTATA+TGG | - | chr2.4:76312783-76312802 | MS.gene072074:intron | 15.0% |
!!! | TTGTTTATTTTATATGGTTT+TGG | - | chr2.4:76312789-76312808 | MS.gene072074:intron | 15.0% |
!!! | TTTTATCAATTCAATTTCTT+TGG | - | chr2.4:76307604-76307623 | MS.gene072074:CDS | 15.0% |
!!! | TTTTTTTCAAATTTATCCAA+AGG | - | chr2.4:76311017-76311036 | MS.gene072074:CDS | 15.0% |
!! | AAAAAAAATGAAAACACTCA+TGG | + | chr2.4:76311002-76311021 | None:intergenic | 20.0% |
!! | AAAAAATGAACAAACAAACA+CGG | + | chr2.4:76309179-76309198 | None:intergenic | 20.0% |
!! | AAATCTACTAAATAATGAGT+AGG | - | chr2.4:76310544-76310563 | MS.gene072074:intron | 20.0% |
!! | AGATATTTGTACAATACAAA+AGG | + | chr2.4:76307777-76307796 | None:intergenic | 20.0% |
!! | CAAAATCTGTATTAATCAAT+TGG | - | chr2.4:76310672-76310691 | MS.gene072074:CDS | 20.0% |
!! | CAATAATGTAAGGATATTTA+AGG | + | chr2.4:76309851-76309870 | None:intergenic | 20.0% |
!! | CTCAAATAATTAATTTCTTG+AGG | - | chr2.4:76307808-76307827 | MS.gene072074:CDS | 20.0% |
!! | CTCAAGAAATTAATTATTTG+AGG | + | chr2.4:76307810-76307829 | None:intergenic | 20.0% |
!! | GTTTCTATGATATAATGATT+AGG | - | chr2.4:76312923-76312942 | MS.gene072074:CDS | 20.0% |
!! | TAATACATAATCACTTATTC+TGG | + | chr2.4:76312560-76312579 | None:intergenic | 20.0% |
!! | TATTGTAAATAAGCTGAATA+GGG | + | chr2.4:76307502-76307521 | None:intergenic | 20.0% |
!! | TGAATTAGAATTTGATGTTT+AGG | - | chr2.4:76308289-76308308 | MS.gene072074:CDS | 20.0% |
!! | TTCTATGATATAATGATTAG+GGG | - | chr2.4:76312925-76312944 | MS.gene072074:CDS | 20.0% |
!! | TTGCAACTATCATTAAAAAA+AGG | - | chr2.4:76311981-76312000 | MS.gene072074:CDS | 20.0% |
!! | TTTGTTCTTTATTCATAGAA+AGG | - | chr2.4:76308608-76308627 | MS.gene072074:intron | 20.0% |
!!! | CTATTTTATGTTTCTTGAAA+GGG | + | chr2.4:76309914-76309933 | None:intergenic | 20.0% |
!!! | TAATAGTGTATAGTTTGTAT+AGG | - | chr2.4:76309692-76309711 | MS.gene072074:intron | 20.0% |
!!! | TGTTCATTTTTTTTTTCTCT+TGG | - | chr2.4:76309187-76309206 | MS.gene072074:intron | 20.0% |
!!! | TTCTTCTCTGTTTTTTTTTA+GGG | - | chr2.4:76310906-76310925 | MS.gene072074:intron | 20.0% |
!!! | TTTCTTCTCTGTTTTTTTTT+AGG | - | chr2.4:76310905-76310924 | MS.gene072074:intron | 20.0% |
! | AAACAACAAAAACATCATCA+AGG | + | chr2.4:76313047-76313066 | None:intergenic | 25.0% |
! | AACAACAAAAACATCATCAA+GGG | + | chr2.4:76313046-76313065 | None:intergenic | 25.0% |
! | AACACAAACAAGAAATCTAA+AGG | + | chr2.4:76307560-76307579 | None:intergenic | 25.0% |
! | AAGAATATAGAAAGCTATTG+AGG | + | chr2.4:76311085-76311104 | None:intergenic | 25.0% |
! | AATATCTTCTCTGGATATTT+AGG | + | chr2.4:76309753-76309772 | None:intergenic | 25.0% |
! | AATCAATAATACCTTGAGTT+TGG | + | chr2.4:76307533-76307552 | None:intergenic | 25.0% |
! | ACAACAACAAAAAAAACTTC+AGG | + | chr2.4:76311328-76311347 | None:intergenic | 25.0% |
! | ACACAAACAAGAAATCTAAA+GGG | + | chr2.4:76307559-76307578 | None:intergenic | 25.0% |
! | ACTTTCTTTCTTATAGCATT+TGG | - | chr2.4:76307942-76307961 | MS.gene072074:intron | 25.0% |
! | AGTATATTGTATACACCAAA+GGG | + | chr2.4:76311544-76311563 | None:intergenic | 25.0% |
! | ATAACTAACAAGATAGAAGA+TGG | + | chr2.4:76307365-76307384 | None:intergenic | 25.0% |
! | ATACAAAGTCAACTTCTTTA+AGG | - | chr2.4:76312422-76312441 | MS.gene072074:intron | 25.0% |
! | ATATCTTCTCTGGATATTTA+GGG | + | chr2.4:76309752-76309771 | None:intergenic | 25.0% |
! | ATATGGAATGGACAAAATTT+AGG | + | chr2.4:76309823-76309842 | None:intergenic | 25.0% |
! | ATGCTGTCAACATATAAATA+TGG | - | chr2.4:76312041-76312060 | MS.gene072074:CDS | 25.0% |
! | CAAAAGTTATCCAGTTTAAA+AGG | + | chr2.4:76311370-76311389 | None:intergenic | 25.0% |
! | CATATAATTTCTTCAGATTC+AGG | - | chr2.4:76312097-76312116 | MS.gene072074:CDS | 25.0% |
! | CCTTTCAAGAAACATAAAAT+AGG | - | chr2.4:76309912-76309931 | MS.gene072074:intron | 25.0% |
! | GAACATAAAATATAAGGCAT+TGG | + | chr2.4:76311516-76311535 | None:intergenic | 25.0% |
! | GAATAAAGAACAAAATACCA+CGG | + | chr2.4:76308602-76308621 | None:intergenic | 25.0% |
! | GACATATAATATTGGAATTG+TGG | - | chr2.4:76312828-76312847 | MS.gene072074:CDS | 25.0% |
! | GCAAACATAAGTTTAAATGA+AGG | + | chr2.4:76312674-76312693 | None:intergenic | 25.0% |
! | GTATTGTAAATAAGCTGAAT+AGG | + | chr2.4:76307503-76307522 | None:intergenic | 25.0% |
! | TAACTAACAAGATAGAAGAT+GGG | + | chr2.4:76307364-76307383 | None:intergenic | 25.0% |
! | TAATGATAGTTGCAAAATGA+GGG | + | chr2.4:76311976-76311995 | None:intergenic | 25.0% |
! | TATGGAATGGACAAAATTTA+GGG | + | chr2.4:76309822-76309841 | None:intergenic | 25.0% |
! | TCAAATCAAGCTACATTTAA+AGG | - | chr2.4:76309935-76309954 | MS.gene072074:intron | 25.0% |
! | TCAAGTCAAGCTATAAAATA+TGG | + | chr2.4:76311851-76311870 | None:intergenic | 25.0% |
! | TCTTGACTACTGTATATTAA+AGG | - | chr2.4:76309959-76309978 | MS.gene072074:intron | 25.0% |
! | TGAGTAGGCAATATTAAATT+TGG | - | chr2.4:76310559-76310578 | MS.gene072074:intron | 25.0% |
! | TGCATAATAGCAATAATGTA+AGG | + | chr2.4:76309861-76309880 | None:intergenic | 25.0% |
! | TTAATGATAGTTGCAAAATG+AGG | + | chr2.4:76311977-76311996 | None:intergenic | 25.0% |
! | TTTCAGTAATGCTTAATAGA+GGG | + | chr2.4:76309077-76309096 | None:intergenic | 25.0% |
!! | AAATTTAGAGCATAAGACTT+TGG | - | chr2.4:76310605-76310624 | MS.gene072074:CDS | 25.0% |
!! | CCATCTTTTTATGTAAAACT+CGG | + | chr2.4:76309248-76309267 | None:intergenic | 25.0% |
!! | CCTATTTTATGTTTCTTGAA+AGG | + | chr2.4:76309915-76309934 | None:intergenic | 25.0% |
!! | GTTTTGTGAACTTATTTGAA+AGG | - | chr2.4:76312333-76312352 | MS.gene072074:CDS | 25.0% |
!! | TTAGTGAAATTTTGGATTCT+AGG | - | chr2.4:76312512-76312531 | MS.gene072074:intron | 25.0% |
!! | TTTAGATTTCTTGTTTGTGT+TGG | - | chr2.4:76307559-76307578 | MS.gene072074:CDS | 25.0% |
!! | TTTTATGTTCTTTAACCCTT+TGG | - | chr2.4:76311526-76311545 | MS.gene072074:CDS | 25.0% |
!!! | GTCAAATTGATTTTTGTTCT+GGG | - | chr2.4:76307655-76307674 | MS.gene072074:intron | 25.0% |
!!! | TTTTTTTTTTTGCGGTCTAT+AGG | + | chr2.4:76311280-76311299 | None:intergenic | 25.0% |
AAAAACATCGATACAAGAAG+AGG | - | chr2.4:76307683-76307702 | MS.gene072074:intron | 30.0% | |
AAAAATCTGTGCCAAGAAAA+TGG | - | chr2.4:76313019-76313038 | MS.gene072074:CDS | 30.0% | |
AAACATGTCATATGAAATGC+TGG | + | chr2.4:76309672-76309691 | None:intergenic | 30.0% | |
AAACTTCAGGTACAGTAAAT+TGG | + | chr2.4:76311315-76311334 | None:intergenic | 30.0% | |
AAATTAGTGATCATAGCCAT+GGG | - | chr2.4:76309582-76309601 | MS.gene072074:intron | 30.0% | |
AATCGTTGAACCTAAAATCA+AGG | + | chr2.4:76311062-76311081 | None:intergenic | 30.0% | |
AATGATAACAATGGAATTGG+AGG | - | chr2.4:76307088-76307107 | MS.gene072074:CDS | 30.0% | |
AATTCAATACCAGATGCTAT+AGG | - | chr2.4:76310711-76310730 | MS.gene072074:CDS | 30.0% | |
ACAAGAAAGGAGATTGTTAT+AGG | - | chr2.4:76312952-76312971 | MS.gene072074:CDS | 30.0% | |
ACATCTGTAATATGTAGAAG+TGG | - | chr2.4:76308539-76308558 | MS.gene072074:intron | 30.0% | |
ACCTAAAATCAAGGATGAAT+TGG | + | chr2.4:76311053-76311072 | None:intergenic | 30.0% | |
ACTGTATACTAACTCTTAAG+AGG | - | chr2.4:76312153-76312172 | MS.gene072074:CDS | 30.0% | |
AGAGTTCTATTTATTTGACC+AGG | - | chr2.4:76312891-76312910 | MS.gene072074:CDS | 30.0% | |
AGTGTCATGATCTTCATATA+AGG | - | chr2.4:76312297-76312316 | MS.gene072074:CDS | 30.0% | |
ATTAGTGTAAGCTAAGCTAA+TGG | + | chr2.4:76309999-76310018 | None:intergenic | 30.0% | |
CAAATAATTCCTCAAGAACA+CGG | + | chr2.4:76312639-76312658 | None:intergenic | 30.0% | |
CAAATCATTGAGCAATTAGA+CGG | + | chr2.4:76310498-76310517 | None:intergenic | 30.0% | |
CAGTATATTGTATACACCAA+AGG | + | chr2.4:76311545-76311564 | None:intergenic | 30.0% | |
CATAATATTCCTATAGCATC+TGG | + | chr2.4:76310723-76310742 | None:intergenic | 30.0% | |
CCAATTCCATTGTTATCATT+GGG | + | chr2.4:76307088-76307107 | None:intergenic | 30.0% | |
CTATTAAGCATTACTGAAAC+TGG | - | chr2.4:76309078-76309097 | MS.gene072074:intron | 30.0% | |
CTCAGAACATAATTATCATC+TGG | + | chr2.4:76309376-76309395 | None:intergenic | 30.0% | |
CTGCAAAACAATAATGATGA+AGG | + | chr2.4:76311611-76311630 | None:intergenic | 30.0% | |
CTTAGCTTACACTAATCTAT+AGG | - | chr2.4:76310003-76310022 | MS.gene072074:intron | 30.0% | |
CTTGAGAATGATTACAAAGA+CGG | + | chr2.4:76310138-76310157 | None:intergenic | 30.0% | |
GATTCAAACTTCTAATACTG+TGG | - | chr2.4:76310230-76310249 | MS.gene072074:intron | 30.0% | |
GTTCTTCATTATCTATTTGC+AGG | - | chr2.4:76308665-76308684 | MS.gene072074:intron | 30.0% | |
GTTTCAGTAATGCTTAATAG+AGG | + | chr2.4:76309078-76309097 | None:intergenic | 30.0% | |
TAAATTAGTGATCATAGCCA+TGG | - | chr2.4:76309581-76309600 | MS.gene072074:intron | 30.0% | |
TAAGCAACTCTCTTCTTTAA+TGG | + | chr2.4:76307861-76307880 | None:intergenic | 30.0% | |
TATCCAGTTTAAAAGGCTTT+AGG | + | chr2.4:76311363-76311382 | None:intergenic | 30.0% | |
TATCTTCTCTGGATATTTAG+GGG | + | chr2.4:76309751-76309770 | None:intergenic | 30.0% | |
TCAAATAAATAGAACTCTGC+TGG | + | chr2.4:76312889-76312908 | None:intergenic | 30.0% | |
TCACCAACAAAACAACAAAA+GGG | + | chr2.4:76308770-76308789 | None:intergenic | 30.0% | |
TCCAATTCCATTGTTATCAT+TGG | + | chr2.4:76307089-76307108 | None:intergenic | 30.0% | |
TGTTCTTGAGGAATTATTTG+CGG | - | chr2.4:76312639-76312658 | MS.gene072074:intron | 30.0% | |
TTAGTGTAAGCTAAGCTAAT+GGG | + | chr2.4:76309998-76310017 | None:intergenic | 30.0% | |
TTATATTTGCCATGATGCTT+GGG | - | chr2.4:76308114-76308133 | MS.gene072074:intron | 30.0% | |
TTATGATACTCTACACACAT+AGG | - | chr2.4:76310066-76310085 | MS.gene072074:intron | 30.0% | |
TTATGTATTATCCAATGAGC+TGG | - | chr2.4:76312570-76312589 | MS.gene072074:intron | 30.0% | |
TTCTTTCTTATAGCATTTGG+TGG | - | chr2.4:76307945-76307964 | MS.gene072074:intron | 30.0% | |
TTGAGAATGATTACAAAGAC+GGG | + | chr2.4:76310137-76310156 | None:intergenic | 30.0% | |
TTGGTGTATACAATATACTG+TGG | - | chr2.4:76311545-76311564 | MS.gene072074:CDS | 30.0% | |
TTTCAAGCTTACAGAATCAA+AGG | + | chr2.4:76311818-76311837 | None:intergenic | 30.0% | |
TTTGAATAATAACCTGTGCA+AGG | + | chr2.4:76309045-76309064 | None:intergenic | 30.0% | |
! | AAACAAAAAAAAAGAGGCGT+CGG | + | chr2.4:76312373-76312392 | None:intergenic | 30.0% |
! | AAGAAGTTGACTTTGTATCT+CGG | + | chr2.4:76312420-76312439 | None:intergenic | 30.0% |
! | AAGGTTGATTCACTTAGAAA+AGG | - | chr2.4:76308161-76308180 | MS.gene072074:intron | 30.0% |
! | AATTCAATTTCTTTGGTTCC+AGG | - | chr2.4:76307611-76307630 | MS.gene072074:CDS | 30.0% |
! | ACCAATTCATCCTTGATTTT+AGG | - | chr2.4:76311049-76311068 | MS.gene072074:CDS | 30.0% |
! | CCGAGTTTTACATAAAAAGA+TGG | - | chr2.4:76309245-76309264 | MS.gene072074:intron | 30.0% |
! | GAATTTAGTTTATCTGACGA+GGG | - | chr2.4:76308311-76308330 | MS.gene072074:CDS | 30.0% |
! | GATAGTGATATTTTACTGCA+GGG | - | chr2.4:76308389-76308408 | MS.gene072074:CDS | 30.0% |
! | GGATATTTAAGGCAGTAATA+TGG | + | chr2.4:76309840-76309859 | None:intergenic | 30.0% |
! | GTTTCTAAGAAAACCAATGA+GGG | + | chr2.4:76308251-76308270 | None:intergenic | 30.0% |
! | TAGCTTTGCATAAGGATATA+TGG | + | chr2.4:76307904-76307923 | None:intergenic | 30.0% |
! | TGTTTACTCAGGTTTTTCAT+AGG | - | chr2.4:76310793-76310812 | MS.gene072074:CDS | 30.0% |
! | TGTTTCTAAGAAAACCAATG+AGG | + | chr2.4:76308252-76308271 | None:intergenic | 30.0% |
! | TTTAAGGCAGTAATATGGAA+TGG | + | chr2.4:76309835-76309854 | None:intergenic | 30.0% |
! | TTTCTAAGAAAACCAATGAG+GGG | + | chr2.4:76308250-76308269 | None:intergenic | 30.0% |
!! | CAACTTCTTTAAGGTTATCT+GGG | - | chr2.4:76312431-76312450 | MS.gene072074:intron | 30.0% |
!! | CTTCATCATTATTGTTTTGC+AGG | - | chr2.4:76311609-76311628 | MS.gene072074:CDS | 30.0% |
!! | GAAAAGAGTATTACATCCAA+AGG | + | chr2.4:76311172-76311191 | None:intergenic | 30.0% |
!! | GATAATTATGTTCTGAGAGA+TGG | - | chr2.4:76309379-76309398 | MS.gene072074:intron | 30.0% |
!! | GGTCAAATTGATTTTTGTTC+TGG | - | chr2.4:76307654-76307673 | MS.gene072074:intron | 30.0% |
!! | TCAACTTCTTTAAGGTTATC+TGG | - | chr2.4:76312430-76312449 | MS.gene072074:intron | 30.0% |
!! | TGATAGTGATATTTTACTGC+AGG | - | chr2.4:76308388-76308407 | MS.gene072074:CDS | 30.0% |
!!! | ATTGATTTTTGTTCTGGGAA+TGG | - | chr2.4:76307660-76307679 | MS.gene072074:intron | 30.0% |
AAAAGAAGATCATCCAGTTC+AGG | + | chr2.4:76309271-76309290 | None:intergenic | 35.0% | |
AAAGAAGAGAGTTGCTTACA+TGG | - | chr2.4:76307863-76307882 | MS.gene072074:intron | 35.0% | |
AAAGCTCGAATTCGATTTCA+TGG | - | chr2.4:76308514-76308533 | MS.gene072074:intron | 35.0% | |
AAGCTCGAATTCGATTTCAT+GGG | - | chr2.4:76308515-76308534 | MS.gene072074:intron | 35.0% | |
AAGTTTAGGTAACTGGAAAC+CGG | + | chr2.4:76309147-76309166 | None:intergenic | 35.0% | |
AATCTCTCTGTAGACATTGT+AGG | - | chr2.4:76310462-76310481 | MS.gene072074:intron | 35.0% | |
ACACACATAGGATATTAGTG+AGG | - | chr2.4:76310078-76310097 | MS.gene072074:intron | 35.0% | |
ACACTCTCAAAGGTTGTATT+TGG | - | chr2.4:76310281-76310300 | MS.gene072074:CDS | 35.0% | |
ACATAATGCACTCAGATGAA+TGG | + | chr2.4:76308337-76308356 | None:intergenic | 35.0% | |
AGAAAAGGAAAAGGAGGAAA+TGG | - | chr2.4:76308478-76308497 | MS.gene072074:intron | 35.0% | |
AGAGTTGAAGTTTCATATCC+TGG | + | chr2.4:76307632-76307651 | None:intergenic | 35.0% | |
AGGACAGTTAAACTAAGCAA+CGG | - | chr2.4:76312117-76312136 | MS.gene072074:CDS | 35.0% | |
AGTATTACATCCAAAGGTTG+TGG | + | chr2.4:76311166-76311185 | None:intergenic | 35.0% | |
AGTGTCTTTGTCTTCTTCAA+AGG | + | chr2.4:76307025-76307044 | None:intergenic | 35.0% | |
ATACAAACTTGCCAAACTCA+AGG | - | chr2.4:76307519-76307538 | MS.gene072074:CDS | 35.0% | |
ATCACAAATCCATTCCATGT+AGG | + | chr2.4:76310388-76310407 | None:intergenic | 35.0% | |
ATCTTCTCTGGATATTTAGG+GGG | + | chr2.4:76309750-76309769 | None:intergenic | 35.0% | |
ATTAGTGAGGTTCATCCTAT+TGG | - | chr2.4:76310091-76310110 | MS.gene072074:intron | 35.0% | |
ATTGATCTACTATGCCTACA+TGG | - | chr2.4:76310371-76310390 | MS.gene072074:intron | 35.0% | |
ATTGGATGTAGAAAGGCTAT+GGG | - | chr2.4:76310643-76310662 | MS.gene072074:CDS | 35.0% | |
CAACAGTATAGATTCTCTCT+AGG | - | chr2.4:76310203-76310222 | MS.gene072074:intron | 35.0% | |
CCACAAAACAATATCTTCTC+TGG | + | chr2.4:76309762-76309781 | None:intergenic | 35.0% | |
CCATTGTTATCATTGGGATT+GGG | + | chr2.4:76307082-76307101 | None:intergenic | 35.0% | |
CCCAATGATAACAATGGAAT+TGG | - | chr2.4:76307085-76307104 | MS.gene072074:CDS | 35.0% | |
CGTCTAATTGCTCAATGATT+TGG | - | chr2.4:76310496-76310515 | MS.gene072074:intron | 35.0% | |
CTGATTTCTCACAACAACAA+TGG | - | chr2.4:76307140-76307159 | MS.gene072074:CDS | 35.0% | |
CTTATATTTGCCATGATGCT+TGG | - | chr2.4:76308113-76308132 | MS.gene072074:intron | 35.0% | |
GATATGAAACTTCAACTCTG+TGG | - | chr2.4:76307633-76307652 | MS.gene072074:intron | 35.0% | |
GTATTACATCCAAAGGTTGT+GGG | + | chr2.4:76311165-76311184 | None:intergenic | 35.0% | |
GTCACCAACAAAACAACAAA+AGG | + | chr2.4:76308771-76308790 | None:intergenic | 35.0% | |
GTTCAATGAAGTTCCTGAAA+AGG | - | chr2.4:76311672-76311691 | MS.gene072074:intron | 35.0% | |
GTTCTATTTATTTGACCAGG+AGG | - | chr2.4:76312894-76312913 | MS.gene072074:CDS | 35.0% | |
GTTGTTGCACATGATGTAAT+TGG | - | chr2.4:76308986-76309005 | MS.gene072074:intron | 35.0% | |
TAAATGGATCCAATGCTGAA+AGG | + | chr2.4:76309488-76309507 | None:intergenic | 35.0% | |
TATGGACTTAATGACTTCAC+CGG | - | chr2.4:76309116-76309135 | MS.gene072074:intron | 35.0% | |
TCAAACTCTGAACATTCACT+TGG | + | chr2.4:76311904-76311923 | None:intergenic | 35.0% | |
TCACATGAATCTTATGTGCT+TGG | + | chr2.4:76310333-76310352 | None:intergenic | 35.0% | |
TCCATTGTTATCATTGGGAT+TGG | + | chr2.4:76307083-76307102 | None:intergenic | 35.0% | |
TGATACCAAGTTTAGGTAAC+TGG | + | chr2.4:76309154-76309173 | None:intergenic | 35.0% | |
TGATCATGTCATCAATGTCA+CGG | + | chr2.4:76309791-76309810 | None:intergenic | 35.0% | |
TTAGTGAGGTTCATCCTATT+GGG | - | chr2.4:76310092-76310111 | MS.gene072074:intron | 35.0% | |
TTTAGGTCAGCAAGTATAAG+TGG | + | chr2.4:76308569-76308588 | None:intergenic | 35.0% | |
TTTGCAGGTTTCAGTTTCAA+AGG | - | chr2.4:76308680-76308699 | MS.gene072074:intron | 35.0% | |
! | AGGTGTTTGTCTTCTTTTTC+TGG | + | chr2.4:76307200-76307219 | None:intergenic | 35.0% |
! | ATAAGACTTTGGAAGTGTGA+GGG | - | chr2.4:76310616-76310635 | MS.gene072074:CDS | 35.0% |
! | ATAGTTTGTATAGGTACGCA+AGG | - | chr2.4:76309701-76309720 | MS.gene072074:intron | 35.0% |
! | ATTATCCCTGTGCTGTTATT+TGG | + | chr2.4:76310445-76310464 | None:intergenic | 35.0% |
! | ATTTCTTGTTTGTGTTGGAC+TGG | - | chr2.4:76307564-76307583 | MS.gene072074:CDS | 35.0% |
! | CTGGTATTGAATTGAGGTTT+AGG | + | chr2.4:76310704-76310723 | None:intergenic | 35.0% |
! | GGAATTTAGTTTATCTGACG+AGG | - | chr2.4:76308310-76308329 | MS.gene072074:CDS | 35.0% |
! | GTATATCTAGCGCATTTTCT+TGG | - | chr2.4:76309552-76309571 | MS.gene072074:intron | 35.0% |
! | TAGCATCTGGTATTGAATTG+AGG | + | chr2.4:76310710-76310729 | None:intergenic | 35.0% |
! | TAGTTTGTATAGGTACGCAA+GGG | - | chr2.4:76309702-76309721 | MS.gene072074:intron | 35.0% |
! | TATACTTGCTGACCTAAAGA+AGG | - | chr2.4:76308571-76308590 | MS.gene072074:intron | 35.0% |
! | TCAAGGATGAATTGGTGATA+AGG | + | chr2.4:76311045-76311064 | None:intergenic | 35.0% |
! | TGACATTGATGACATGATCA+TGG | - | chr2.4:76309791-76309810 | MS.gene072074:intron | 35.0% |
! | TGTTTGTCTTCTTTTTCTGG+AGG | + | chr2.4:76307197-76307216 | None:intergenic | 35.0% |
! | TTCTTAGTCAGTGTTTTCCT+CGG | - | chr2.4:76308812-76308831 | MS.gene072074:intron | 35.0% |
! | TTCTTCTCTCTTTCCTTTTC+AGG | + | chr2.4:76311688-76311707 | None:intergenic | 35.0% |
! | TTGGCACAGATTTTTCTGAA+GGG | + | chr2.4:76313014-76313033 | None:intergenic | 35.0% |
! | TTGGTGACTAATTCTTGCAT+AGG | - | chr2.4:76308783-76308802 | MS.gene072074:intron | 35.0% |
! | TTTTTCTCTTGGCCAGATAT+GGG | - | chr2.4:76309198-76309217 | MS.gene072074:intron | 35.0% |
!! | AGAAGATATTGTTTTGTGGC+TGG | - | chr2.4:76309763-76309782 | MS.gene072074:intron | 35.0% |
!! | CCAGAGAAGATATTGTTTTG+TGG | - | chr2.4:76309759-76309778 | MS.gene072074:intron | 35.0% |
!! | CTGCTAGTTTAGCATTTTTG+AGG | - | chr2.4:76312763-76312782 | MS.gene072074:intron | 35.0% |
!! | GATAGAGTGTTGTTGTTGTT+TGG | + | chr2.4:76307335-76307354 | None:intergenic | 35.0% |
!! | TTGAATTGAGGTTTAGGTTG+AGG | + | chr2.4:76310698-76310717 | None:intergenic | 35.0% |
!! | TTGAGTTTTGACACTCTCAA+AGG | - | chr2.4:76310271-76310290 | MS.gene072074:CDS | 35.0% |
!!! | GTTTTTGTTGTTTTAGCCTC+AGG | - | chr2.4:76313054-76313073 | MS.gene072074:CDS | 35.0% |
!!! | TCACCCTTTTGTTGTTTTGT+TGG | - | chr2.4:76308764-76308783 | MS.gene072074:intron | 35.0% |
!!! | TGCAATCATTGTTTTAGCTG+CGG | - | chr2.4:76308707-76308726 | MS.gene072074:intron | 35.0% |
!!! | TTTTTTCTCTTGGCCAGATA+TGG | - | chr2.4:76309197-76309216 | MS.gene072074:intron | 35.0% |
AACAAGATAGAAGATGGGAG+AGG | + | chr2.4:76307359-76307378 | None:intergenic | 40.0% | |
AAGAAGGTTTACAGGAGGTT+TGG | + | chr2.4:76307233-76307252 | None:intergenic | 40.0% | |
AATGAGCAGAAGAGTAGCAA+GGG | + | chr2.4:76312241-76312260 | None:intergenic | 40.0% | |
ACAGAATCAAAGGTCTCCAA+TGG | + | chr2.4:76311808-76311827 | None:intergenic | 40.0% | |
ACTGATATGAAATGCAGCAG+CGG | + | chr2.4:76312280-76312299 | None:intergenic | 40.0% | |
AGAAACCATGTACTCATCCT+TGG | - | chr2.4:76308203-76308222 | MS.gene072074:intron | 40.0% | |
AGAACATAAAGCTTGTCCAC+CGG | - | chr2.4:76311743-76311762 | MS.gene072074:intron | 40.0% | |
AGAAGGTTTACAGGAGGTTT+GGG | + | chr2.4:76307232-76307251 | None:intergenic | 40.0% | |
AGACTTGAATGAGGGATGTT+TGG | + | chr2.4:76310760-76310779 | None:intergenic | 40.0% | |
AGAGTTGTTCTTAGCTTAGC+TGG | - | chr2.4:76308866-76308885 | MS.gene072074:intron | 40.0% | |
AGCATAAGTGTCATCATCCT+CGG | + | chr2.4:76309425-76309444 | None:intergenic | 40.0% | |
AGCATTACTGAAACTGGTAG+TGG | - | chr2.4:76309084-76309103 | MS.gene072074:intron | 40.0% | |
AGCTCGAATTCGATTTCATG+GGG | - | chr2.4:76308516-76308535 | MS.gene072074:intron | 40.0% | |
ATGTCACCAAATAACAGCAC+AGG | - | chr2.4:76310436-76310455 | MS.gene072074:intron | 40.0% | |
ATTAAATCACCAGTTTGCGG+AGG | + | chr2.4:76311239-76311258 | None:intergenic | 40.0% | |
CACGGTATGATACCAAGTTT+AGG | + | chr2.4:76309161-76309180 | None:intergenic | 40.0% | |
CATAAAAAGATGGCCTGAAC+TGG | - | chr2.4:76309255-76309274 | MS.gene072074:intron | 40.0% | |
CCACCAACAAGTTTCACTAA+GGG | + | chr2.4:76308950-76308969 | None:intergenic | 40.0% | |
CCCAATCCCAATGATAACAA+TGG | - | chr2.4:76307079-76307098 | MS.gene072074:CDS | 40.0% | |
CCTATTGGGGAATCTAGAAA+TGG | - | chr2.4:76310106-76310125 | MS.gene072074:intron | 40.0% | |
CTAGGTAGAGACTTGAATGA+GGG | + | chr2.4:76310768-76310787 | None:intergenic | 40.0% | |
CTCATTCAAGTCTCTACCTA+GGG | - | chr2.4:76310767-76310786 | MS.gene072074:CDS | 40.0% | |
CTGACTCATCTGCAAGAATA+AGG | + | chr2.4:76312185-76312204 | None:intergenic | 40.0% | |
GAACCCTTAGTGAAACTTGT+TGG | - | chr2.4:76308944-76308963 | MS.gene072074:intron | 40.0% | |
GAGAACAGAAAGTAACAAGG+AGG | - | chr2.4:76307830-76307849 | MS.gene072074:CDS | 40.0% | |
GAGGAGAACAGAAAGTAACA+AGG | - | chr2.4:76307827-76307846 | MS.gene072074:CDS | 40.0% | |
GATTGGATGTAGAAAGGCTA+TGG | - | chr2.4:76310642-76310661 | MS.gene072074:CDS | 40.0% | |
GCTTGTTTCGGATGCTATAT+CGG | - | chr2.4:76308136-76308155 | MS.gene072074:intron | 40.0% | |
GGAAAAGGAGGAAATGGAAA+TGG | - | chr2.4:76308484-76308503 | MS.gene072074:intron | 40.0% | |
GGAAATCATGCTGAAACAGA+AGG | - | chr2.4:76308044-76308063 | MS.gene072074:intron | 40.0% | |
GGGATAGATTGGATGTAGAA+AGG | - | chr2.4:76310636-76310655 | MS.gene072074:CDS | 40.0% | |
GGGATTAAATCACCAGTTTG+CGG | + | chr2.4:76311242-76311261 | None:intergenic | 40.0% | |
GGTTTCCAGTTACCTAAACT+TGG | - | chr2.4:76309146-76309165 | MS.gene072074:intron | 40.0% | |
GTCTTTGTCTTCTTCAAAGG+TGG | + | chr2.4:76307022-76307041 | None:intergenic | 40.0% | |
TAGAACAGAAAGATGACCTC+TGG | + | chr2.4:76309460-76309479 | None:intergenic | 40.0% | |
TAGTGAGGTTCATCCTATTG+GGG | - | chr2.4:76310093-76310112 | MS.gene072074:intron | 40.0% | |
TATTCTTGCAGATGAGTCAG+TGG | - | chr2.4:76312185-76312204 | MS.gene072074:CDS | 40.0% | |
TATTGTGGTGCTTGCAGAAA+AGG | - | chr2.4:76308463-76308482 | MS.gene072074:intron | 40.0% | |
TCACTAAGGGTTCATTGTCA+AGG | + | chr2.4:76308937-76308956 | None:intergenic | 40.0% | |
TCATTCAAGTCTCTACCTAG+GGG | - | chr2.4:76310768-76310787 | MS.gene072074:CDS | 40.0% | |
TCCACCAACAAGTTTCACTA+AGG | + | chr2.4:76308951-76308970 | None:intergenic | 40.0% | |
TCCTACTTCAACATGCACTT+TGG | + | chr2.4:76312067-76312086 | None:intergenic | 40.0% | |
TCTACTATGCCTACATGGAA+TGG | - | chr2.4:76310376-76310395 | MS.gene072074:intron | 40.0% | |
TCTGAACATTCACTTGGACA+TGG | + | chr2.4:76311898-76311917 | None:intergenic | 40.0% | |
TCTGCTCATTCGTGATATAC+AGG | - | chr2.4:76312251-76312270 | MS.gene072074:CDS | 40.0% | |
TCTTAGCTTAGCTGGTGTAA+AGG | - | chr2.4:76308874-76308893 | MS.gene072074:intron | 40.0% | |
TCTTGAGGAATTATTTGCGG+AGG | - | chr2.4:76312642-76312661 | MS.gene072074:intron | 40.0% | |
TGGTGGTTTAGCATTGTATG+CGG | - | chr2.4:76307962-76307981 | MS.gene072074:intron | 40.0% | |
TGTCACCAAATAACAGCACA+GGG | - | chr2.4:76310437-76310456 | MS.gene072074:intron | 40.0% | |
TTAGCATTGTATGCGGTTAC+TGG | - | chr2.4:76307969-76307988 | MS.gene072074:intron | 40.0% | |
TTGGAATTGTGGTGCACTTA+TGG | - | chr2.4:76312839-76312858 | MS.gene072074:CDS | 40.0% | |
TTGTTATCATTGGGATTGGG+AGG | + | chr2.4:76307079-76307098 | None:intergenic | 40.0% | |
! | AATTGGTGATAAGGCACCTT+TGG | + | chr2.4:76311036-76311055 | None:intergenic | 40.0% |
! | AGTGCAAGTAGCTTTGCATA+AGG | + | chr2.4:76307912-76307931 | None:intergenic | 40.0% |
! | CAAATTGGTAATCCCCTCAT+TGG | - | chr2.4:76308235-76308254 | MS.gene072074:CDS | 40.0% |
! | CATAAGACTTTGGAAGTGTG+AGG | - | chr2.4:76310615-76310634 | MS.gene072074:CDS | 40.0% |
! | CCATTTCTAGATTCCCCAAT+AGG | + | chr2.4:76310109-76310128 | None:intergenic | 40.0% |
! | CTTGGCACAGATTTTTCTGA+AGG | + | chr2.4:76313015-76313034 | None:intergenic | 40.0% |
! | GCAATAGCCAATAAGAGTGT+TGG | - | chr2.4:76308431-76308450 | MS.gene072074:intron | 40.0% |
! | GCACCTAAAGCCTTTTAAAC+TGG | - | chr2.4:76311357-76311376 | MS.gene072074:intron | 40.0% |
! | GTTGACTTTGTATCTCGGTA+TGG | + | chr2.4:76312415-76312434 | None:intergenic | 40.0% |
! | TCATCAAGGGACCATTTTCT+TGG | + | chr2.4:76313033-76313052 | None:intergenic | 40.0% |
!! | AAAAAAAAAGAGGCGTCGGA+TGG | + | chr2.4:76312369-76312388 | None:intergenic | 40.0% |
!! | AAAAAAAAGAGGCGTCGGAT+GGG | + | chr2.4:76312368-76312387 | None:intergenic | 40.0% |
!! | ATAGCCAATAAGAGTGTTGG+TGG | - | chr2.4:76308434-76308453 | MS.gene072074:intron | 40.0% |
!! | GAAACTCTGAGATTGAGAGA+AGG | + | chr2.4:76307049-76307068 | None:intergenic | 40.0% |
!! | GTGTTGTTGTTGTTTGGTGA+TGG | + | chr2.4:76307329-76307348 | None:intergenic | 40.0% |
!! | TGGTAGTGGCTCAAATGTTA+TGG | - | chr2.4:76309098-76309117 | MS.gene072074:intron | 40.0% |
!! | TTGTTGTTGTTTGGTGATGG+AGG | + | chr2.4:76307326-76307345 | None:intergenic | 40.0% |
!!! | GCAGGTTTTAGAAGCATTCT+TGG | - | chr2.4:76311627-76311646 | MS.gene072074:intron | 40.0% |
AATGACTTCACCGGTACATC+CGG | - | chr2.4:76309125-76309144 | MS.gene072074:intron | 45.0% | |
AATTGTGGTGCACTTATGGC+AGG | - | chr2.4:76312843-76312862 | MS.gene072074:CDS | 45.0% | |
ACCACCACCAACACTCTTAT+TGG | + | chr2.4:76308441-76308460 | None:intergenic | 45.0% | |
ACCACGGCAATACCTTCTTT+AGG | + | chr2.4:76308586-76308605 | None:intergenic | 45.0% | |
ACCTGAGTAAACAAACCCCT+AGG | + | chr2.4:76310786-76310805 | None:intergenic | 45.0% | |
AGCTTAGCTGGTGTAAAGGA+GGG | - | chr2.4:76308878-76308897 | MS.gene072074:intron | 45.0% | |
AGGGAAATGCTGTCATTAGG+CGG | - | chr2.4:76311767-76311786 | MS.gene072074:intron | 45.0% | |
ATAATAACCTGTGCAAGGCC+AGG | + | chr2.4:76309040-76309059 | None:intergenic | 45.0% | |
ATCATAGCCATGGGTGACTT+GGG | - | chr2.4:76309591-76309610 | MS.gene072074:intron | 45.0% | |
ATCCAATGAGCTGGTTAGCA+TGG | - | chr2.4:76312579-76312598 | MS.gene072074:intron | 45.0% | |
ATTGTGGTGCACTTATGGCA+GGG | - | chr2.4:76312844-76312863 | MS.gene072074:CDS | 45.0% | |
CAGATATGGGAGGACATTCT+AGG | - | chr2.4:76309211-76309230 | MS.gene072074:intron | 45.0% | |
CATGCTGAAACAGAAGGAAC+CGG | - | chr2.4:76308050-76308069 | MS.gene072074:intron | 45.0% | |
CCTAGGTAGAGACTTGAATG+AGG | + | chr2.4:76310769-76310788 | None:intergenic | 45.0% | |
CCTCATTCAAGTCTCTACCT+AGG | - | chr2.4:76310766-76310785 | MS.gene072074:CDS | 45.0% | |
CGGTCTATAGGAACGCTATT+TGG | + | chr2.4:76311268-76311287 | None:intergenic | 45.0% | |
CGTCTCTGTCTCAATTAGTG+CGG | - | chr2.4:76308082-76308101 | MS.gene072074:intron | 45.0% | |
CTAGAATGTCCTCCCATATC+TGG | + | chr2.4:76309213-76309232 | None:intergenic | 45.0% | |
GAACATAAAGCTTGTCCACC+GGG | - | chr2.4:76311744-76311763 | MS.gene072074:intron | 45.0% | |
GAATGAGCAGAAGAGTAGCA+AGG | + | chr2.4:76312242-76312261 | None:intergenic | 45.0% | |
GATAATAGCACGCTCTTGGT+TGG | + | chr2.4:76312989-76313008 | None:intergenic | 45.0% | |
GATGATGACACTTATGCTCC+AGG | - | chr2.4:76309427-76309446 | MS.gene072074:intron | 45.0% | |
GATTAGGGGTCGTACAAGAA+AGG | - | chr2.4:76312939-76312958 | MS.gene072074:CDS | 45.0% | |
GATTGTTATAGGCTATCGCC+TGG | - | chr2.4:76312963-76312982 | MS.gene072074:CDS | 45.0% | |
GCAAATCAACCGTGTTCTTG+AGG | - | chr2.4:76312627-76312646 | MS.gene072074:intron | 45.0% | |
GCCAAAGTGCATGTTGAAGT+AGG | - | chr2.4:76312063-76312082 | MS.gene072074:CDS | 45.0% | |
GCTTGCAGAAAAGGAAAAGG+AGG | - | chr2.4:76308472-76308491 | MS.gene072074:intron | 45.0% | |
GGTGCTTGCAGAAAAGGAAA+AGG | - | chr2.4:76308469-76308488 | MS.gene072074:intron | 45.0% | |
GTCTCTGTCTCAATTAGTGC+GGG | - | chr2.4:76308083-76308102 | MS.gene072074:intron | 45.0% | |
GTGTAAAGGAGGGCTTAAGA+GGG | - | chr2.4:76308888-76308907 | MS.gene072074:intron | 45.0% | |
TAACTGGAAACCGGATGTAC+CGG | + | chr2.4:76309138-76309157 | None:intergenic | 45.0% | |
TAATGACAGCATTTCCCTCC+CGG | + | chr2.4:76311765-76311784 | None:intergenic | 45.0% | |
TACCCTTCTTTCCTTGGCAT+TGG | - | chr2.4:76307166-76307185 | MS.gene072074:intron | 45.0% | |
TAGCTTAGCTGGTGTAAAGG+AGG | - | chr2.4:76308877-76308896 | MS.gene072074:intron | 45.0% | |
TCCATCAACTAGACGAGAAG+CGG | + | chr2.4:76312696-76312715 | None:intergenic | 45.0% | |
TGAGGAATTATTTGCGGAGG+AGG | - | chr2.4:76312645-76312664 | MS.gene072074:intron | 45.0% | |
TGAGGAGGAAGAAGGTTTAC+AGG | + | chr2.4:76307241-76307260 | None:intergenic | 45.0% | |
TGCAATACCGTGTGGAGTTA+AGG | - | chr2.4:76309318-76309337 | MS.gene072074:intron | 45.0% | |
TGCCAATGCCAAGGAAAGAA+GGG | + | chr2.4:76307171-76307190 | None:intergenic | 45.0% | |
TGGAACTACCCTTCTTTCCT+TGG | - | chr2.4:76307160-76307179 | MS.gene072074:CDS | 45.0% | |
TTAAGGTTGCTGCAGATGGT+GGG | - | chr2.4:76309335-76309354 | MS.gene072074:intron | 45.0% | |
TTCGGATGCTATATCGGAGA+AGG | - | chr2.4:76308142-76308161 | MS.gene072074:intron | 45.0% | |
TTGAGACAGAGACGATTCTC+TGG | + | chr2.4:76308076-76308095 | None:intergenic | 45.0% | |
TTTCCTGATGCAATACCGTG+TGG | - | chr2.4:76309310-76309329 | MS.gene072074:intron | 45.0% | |
! | ACCTAGGGGTTTGTTTACTC+AGG | - | chr2.4:76310782-76310801 | MS.gene072074:CDS | 45.0% |
! | CATGATGCTTGGGCTTGTTT+CGG | - | chr2.4:76308124-76308143 | MS.gene072074:intron | 45.0% |
! | CTGAAGCACTTTGGCATTCT+TGG | - | chr2.4:76308003-76308022 | MS.gene072074:intron | 45.0% |
! | CTTAAGAGGGCATGTTGTTG+TGG | - | chr2.4:76308901-76308920 | MS.gene072074:intron | 45.0% |
! | GCTGGTGAACTTGACGTTTT+TGG | - | chr2.4:76311715-76311734 | MS.gene072074:intron | 45.0% |
! | TCTTTTCCGCATCATTGCCT+GGG | - | chr2.4:76311185-76311204 | MS.gene072074:intron | 45.0% |
! | TGGAAGTGTGAGGGATAGAT+TGG | - | chr2.4:76310625-76310644 | MS.gene072074:CDS | 45.0% |
!! | AAAAAAAGAGGCGTCGGATG+GGG | + | chr2.4:76312367-76312386 | None:intergenic | 45.0% |
!! | AAAGGTGTCCTCCATGTAAC+TGG | - | chr2.4:76311999-76312018 | MS.gene072074:CDS | 45.0% |
!! | AACATCCAGAGTTCTGAACC+AGG | + | chr2.4:76311655-76311674 | None:intergenic | 45.0% |
!! | ACATCCAGAGTTCTGAACCA+GGG | + | chr2.4:76311654-76311673 | None:intergenic | 45.0% |
!! | ACCTAAAGAAGGTATTGCCG+TGG | - | chr2.4:76308582-76308601 | MS.gene072074:intron | 45.0% |
!! | AGAGAGAAGAAACTTGCTGC+TGG | - | chr2.4:76311697-76311716 | MS.gene072074:intron | 45.0% |
!! | ATAAGGCATTGGTCGAGTCT+AGG | + | chr2.4:76311505-76311524 | None:intergenic | 45.0% |
!! | CCCTTAGTGAAACTTGTTGG+TGG | - | chr2.4:76308947-76308966 | MS.gene072074:intron | 45.0% |
!! | GGTTGATAATAGCACGCTCT+TGG | + | chr2.4:76312993-76313012 | None:intergenic | 45.0% |
!! | TCTAGCTAGCCTTTCAGCAT+TGG | - | chr2.4:76309476-76309495 | MS.gene072074:intron | 45.0% |
!! | TGTTGGTGGTGGTGTTATTG+TGG | - | chr2.4:76308448-76308467 | MS.gene072074:intron | 45.0% |
!! | TTGTTTGGTGATGGAGGAAG+AGG | + | chr2.4:76307320-76307339 | None:intergenic | 45.0% |
!!! | GGAGGTGGTTTTGTTGTAGT+CGG | + | chr2.4:76307278-76307297 | None:intergenic | 45.0% |
!!! | TGGTTTTGTTGTAGTCGGAG+CGG | + | chr2.4:76307273-76307292 | None:intergenic | 45.0% |
!! | TGATAAAAAAAATAAAATAA+TGG | + | chr2.4:76307592-76307611 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTTG+CGG | + | chr2.4:76311288-76311307 | None:intergenic | 5.0% |
ACATCCAAAGGTTGTGGGCT+TGG | + | chr2.4:76311160-76311179 | None:intergenic | 50.0% | |
ACCATGTACTCATCCTTGGC+TGG | - | chr2.4:76308207-76308226 | MS.gene072074:intron | 50.0% | |
ACTCCACACGGTATTGCATC+AGG | + | chr2.4:76309316-76309335 | None:intergenic | 50.0% | |
AGAAAGATGACCTCTGGCAG+TGG | + | chr2.4:76309454-76309473 | None:intergenic | 50.0% | |
AGGTTTACAGGAGGTTTGGG+AGG | + | chr2.4:76307229-76307248 | None:intergenic | 50.0% | |
ATAAAGCTTGTCCACCGGGA+GGG | - | chr2.4:76311748-76311767 | MS.gene072074:intron | 50.0% | |
CATAGAAACAGAGCTCCTCC+TGG | + | chr2.4:76312912-76312931 | None:intergenic | 50.0% | |
CATCATCCTCGGCTATGACA+AGG | + | chr2.4:76309414-76309433 | None:intergenic | 50.0% | |
CCAATTTGTCACTCCAGCCA+AGG | + | chr2.4:76308223-76308242 | None:intergenic | 50.0% | |
CCTTGGCTGGAGTGACAAAT+TGG | - | chr2.4:76308220-76308239 | MS.gene072074:intron | 50.0% | |
CGAAACAAGCCCAAGCATCA+TGG | + | chr2.4:76308126-76308145 | None:intergenic | 50.0% | |
CTGCCAATGCCAAGGAAAGA+AGG | + | chr2.4:76307172-76307191 | None:intergenic | 50.0% | |
CTGGGTTCTCTCACAACTCA+TGG | - | chr2.4:76312449-76312468 | MS.gene072074:intron | 50.0% | |
GAAAGATGACCTCTGGCAGT+GGG | + | chr2.4:76309453-76309472 | None:intergenic | 50.0% | |
GATCATAGCCATGGGTGACT+TGG | - | chr2.4:76309590-76309609 | MS.gene072074:intron | 50.0% | |
GCAGCAACCTTAACTCCACA+CGG | + | chr2.4:76309328-76309347 | None:intergenic | 50.0% | |
GCATTGTATGCGGTTACTGG+CGG | - | chr2.4:76307972-76307991 | MS.gene072074:intron | 50.0% | |
GGAGGAAGAAGGTTTACAGG+AGG | + | chr2.4:76307238-76307257 | None:intergenic | 50.0% | |
GGAGTTAAGGTTGCTGCAGA+TGG | - | chr2.4:76309331-76309350 | MS.gene072074:intron | 50.0% | |
GGATGTAGAAAGGCTATGGG+CGG | - | chr2.4:76310646-76310665 | MS.gene072074:CDS | 50.0% | |
GGGAGGGAAATGCTGTCATT+AGG | - | chr2.4:76311764-76311783 | MS.gene072074:intron | 50.0% | |
GGTGTAAAGGAGGGCTTAAG+AGG | - | chr2.4:76308887-76308906 | MS.gene072074:intron | 50.0% | |
GGTTAGCATGGCACTAGCTA+TGG | - | chr2.4:76312591-76312610 | MS.gene072074:intron | 50.0% | |
GTTAAGGTTGCTGCAGATGG+TGG | - | chr2.4:76309334-76309353 | MS.gene072074:intron | 50.0% | |
TAGGGGGATCACGTATCCTA+GGG | + | chr2.4:76309734-76309753 | None:intergenic | 50.0% | |
TCAAAGCACGTGCATCACTC+TGG | + | chr2.4:76308847-76308866 | None:intergenic | 50.0% | |
TCCAGCCAAGGATGAGTACA+TGG | + | chr2.4:76308211-76308230 | None:intergenic | 50.0% | |
TCCTCCATGTAACTGGTGGA+CGG | - | chr2.4:76312006-76312025 | MS.gene072074:CDS | 50.0% | |
TCTCCAATGGAAGACTCTCG+AGG | + | chr2.4:76311795-76311814 | None:intergenic | 50.0% | |
TCTGTCTCAATTAGTGCGGG+TGG | - | chr2.4:76308086-76308105 | MS.gene072074:intron | 50.0% | |
TCTTGCAGATGAGTCAGTGG+AGG | - | chr2.4:76312188-76312207 | MS.gene072074:CDS | 50.0% | |
TGCCATGCTAACCAGCTCAT+TGG | + | chr2.4:76312584-76312603 | None:intergenic | 50.0% | |
TGCGGACGAAAATGCAGATC+AGG | - | chr2.4:76308725-76308744 | MS.gene072074:intron | 50.0% | |
TGGACTTATGTAGCTGACGC+AGG | - | chr2.4:76308023-76308042 | MS.gene072074:intron | 50.0% | |
TGTATTGCCCAAGTCACCCA+TGG | + | chr2.4:76309601-76309620 | None:intergenic | 50.0% | |
TTAGGGGGATCACGTATCCT+AGG | + | chr2.4:76309735-76309754 | None:intergenic | 50.0% | |
TTCTCTTGGCCAGATATGGG+AGG | - | chr2.4:76309201-76309220 | MS.gene072074:intron | 50.0% | |
TTGTGACCCAGGCAATGATG+CGG | + | chr2.4:76311194-76311213 | None:intergenic | 50.0% | |
TTTACAGGAGGTTTGGGAGG+AGG | + | chr2.4:76307226-76307245 | None:intergenic | 50.0% | |
! | CACTCTGGAGACAAATTCCG+AGG | + | chr2.4:76308832-76308851 | None:intergenic | 50.0% |
! | CTCTTTTCCGCATCATTGCC+TGG | - | chr2.4:76311184-76311203 | MS.gene072074:intron | 50.0% |
! | GGTCACAAAGTGCTTCCAGT+CGG | - | chr2.4:76311206-76311225 | MS.gene072074:intron | 50.0% |
! | GTAGCATGGCTGAAGCACTT+TGG | - | chr2.4:76307994-76308013 | MS.gene072074:intron | 50.0% |
! | TACGCAAGGGCTATTTCCCT+AGG | - | chr2.4:76309715-76309734 | MS.gene072074:intron | 50.0% |
!! | CATCCAGAGTTCTGAACCAG+GGG | + | chr2.4:76311653-76311672 | None:intergenic | 50.0% |
!! | CTGAAGCTTGCTGCATTTCG+CGG | + | chr2.4:76312477-76312496 | None:intergenic | 50.0% |
!! | GCCAATAAGAGTGTTGGTGG+TGG | - | chr2.4:76308437-76308456 | MS.gene072074:intron | 50.0% |
!! | GTTTTGTTGTAGTCGGAGCG+GGG | + | chr2.4:76307271-76307290 | None:intergenic | 50.0% |
!! | TTAGAAGCATTCTTGGCCCC+TGG | - | chr2.4:76311634-76311653 | MS.gene072074:intron | 50.0% |
!! | TTGGTGATGGAGGAAGAGGA+AGG | + | chr2.4:76307316-76307335 | None:intergenic | 50.0% |
!!! | GGTTTTGTTGTAGTCGGAGC+GGG | + | chr2.4:76307272-76307291 | None:intergenic | 50.0% |
ATGGAGGAAGAGGAAGGTGG+TGG | + | chr2.4:76307310-76307329 | None:intergenic | 55.0% | |
ATTCAGTGTGCTCTGCAGCC+TGG | - | chr2.4:76309019-76309038 | MS.gene072074:intron | 55.0% | |
CATAAAGCTTGTCCACCGGG+AGG | - | chr2.4:76311747-76311766 | MS.gene072074:intron | 55.0% | |
CGAAGTCCTTGTCATAGCCG+AGG | - | chr2.4:76309405-76309424 | MS.gene072074:intron | 55.0% | |
GACAGAGACGATTCTCTGGC+CGG | + | chr2.4:76308072-76308091 | None:intergenic | 55.0% | |
GCACCTCGAGAGTCTTCCAT+TGG | - | chr2.4:76311789-76311808 | MS.gene072074:intron | 55.0% | |
GCCGCTTCTCGTCTAGTTGA+TGG | - | chr2.4:76312692-76312711 | MS.gene072074:intron | 55.0% | |
GGTGTCCTCCATGTAACTGG+TGG | - | chr2.4:76312002-76312021 | MS.gene072074:CDS | 55.0% | |
GTCTCCAAGCCCACAACCTT+TGG | - | chr2.4:76311153-76311172 | MS.gene072074:CDS | 55.0% | |
TGGTGGAAGAAGTGAGGAGG+TGG | + | chr2.4:76307293-76307312 | None:intergenic | 55.0% | |
TGTCCCGTCCACCAGTTACA+TGG | + | chr2.4:76312013-76312032 | None:intergenic | 55.0% | |
! | CCTCCATGTAACTGGTGGAC+GGG | - | chr2.4:76312007-76312026 | MS.gene072074:CDS | 55.0% |
! | GGTTTGAAGCCTCCGCAAAC+TGG | - | chr2.4:76311227-76311246 | MS.gene072074:intron | 55.0% |
! | GTGATGGAGGAAGAGGAAGG+TGG | + | chr2.4:76307313-76307332 | None:intergenic | 55.0% |
!! | AGGTGGTGGAAGAAGTGAGG+AGG | + | chr2.4:76307296-76307315 | None:intergenic | 55.0% |
!! | CTGGAAGCACTTTGTGACCC+AGG | + | chr2.4:76311205-76311224 | None:intergenic | 55.0% |
!! | GGAAGGTGGTGGAAGAAGTG+AGG | + | chr2.4:76307299-76307318 | None:intergenic | 55.0% |
ACAGGAGGTTTGGGAGGAGG+AGG | + | chr2.4:76307223-76307242 | None:intergenic | 60.0% | |
CCCGTCCACCAGTTACATGG+AGG | + | chr2.4:76312010-76312029 | None:intergenic | 60.0% | |
GACGGGGATGAGGAGGAAGA+AGG | + | chr2.4:76307249-76307268 | None:intergenic | 60.0% | |
TGACAGCATTTCCCTCCCGG+TGG | + | chr2.4:76311762-76311781 | None:intergenic | 60.0% | |
TGCGGAGGCTTCAAACCGAC+TGG | + | chr2.4:76311224-76311243 | None:intergenic | 60.0% | |
TGCGGTTACTGGCGGTAGCA+TGG | - | chr2.4:76307980-76307999 | MS.gene072074:intron | 60.0% | |
TGGCCCCTGGTTCAGAACTC+TGG | - | chr2.4:76311647-76311666 | MS.gene072074:intron | 60.0% | |
TGTTGTAGTCGGAGCGGGGA+CGG | + | chr2.4:76307267-76307286 | None:intergenic | 60.0% | |
! | TAGCACGCTCTTGGTTGGCC+AGG | + | chr2.4:76312984-76313003 | None:intergenic | 60.0% |
!! | AAAGAGGCGTCGGATGGGGA+TGG | + | chr2.4:76312363-76312382 | None:intergenic | 60.0% |
!! | TGGAGGTGCTGCCAATGCCA+AGG | + | chr2.4:76307180-76307199 | None:intergenic | 60.0% |
ATGACCTCTGGCAGTGGGCC+TGG | + | chr2.4:76309448-76309467 | None:intergenic | 65.0% | |
GGAGGTTTGGGAGGAGGAGG+AGG | + | chr2.4:76307220-76307239 | None:intergenic | 65.0% | |
GTTGTAGTCGGAGCGGGGAC+GGG | + | chr2.4:76307266-76307285 | None:intergenic | 65.0% | |
TTGTAGTCGGAGCGGGGACG+GGG | + | chr2.4:76307265-76307284 | None:intergenic | 65.0% | |
!! | TCTGCAGCCTGGCCTTGCAC+AGG | - | chr2.4:76309030-76309049 | MS.gene072074:intron | 65.0% |
TGCTCCAGGCCCACTGCCAG+AGG | - | chr2.4:76309441-76309460 | MS.gene072074:intron | 70.0% | |
GAGCGGGGACGGGGATGAGG+AGG | + | chr2.4:76307256-76307275 | None:intergenic | 75.0% | |
TCGGAGCGGGGACGGGGATG+AGG | + | chr2.4:76307259-76307278 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 76306965 | 76313083 | 76306965 | ID=MS.gene072074 |
chr2.4 | mRNA | 76306965 | 76313083 | 76306965 | ID=MS.gene072074.t1;Parent=MS.gene072074 |
chr2.4 | exon | 76312808 | 76313083 | 76312808 | ID=MS.gene072074.t1.exon1;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76312808 | 76313083 | 76312808 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76311807 | 76312415 | 76311807 | ID=MS.gene072074.t1.exon2;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76311807 | 76312415 | 76311807 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76311456 | 76311638 | 76311456 | ID=MS.gene072074.t1.exon3;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76311456 | 76311638 | 76311456 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76311302 | 76311361 | 76311302 | ID=MS.gene072074.t1.exon4;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76311302 | 76311361 | 76311302 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76310997 | 76311200 | 76310997 | ID=MS.gene072074.t1.exon5;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76310997 | 76311200 | 76310997 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76310586 | 76310834 | 76310586 | ID=MS.gene072074.t1.exon6;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76310586 | 76310834 | 76310586 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76310236 | 76310334 | 76310236 | ID=MS.gene072074.t1.exon7;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76310236 | 76310334 | 76310236 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76308223 | 76308417 | 76308223 | ID=MS.gene072074.t1.exon8;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76308223 | 76308417 | 76308223 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76307776 | 76307868 | 76307776 | ID=MS.gene072074.t1.exon9;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76307776 | 76307868 | 76307776 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76307382 | 76307648 | 76307382 | ID=MS.gene072074.t1.exon10;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76307382 | 76307648 | 76307382 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
chr2.4 | exon | 76306965 | 76307183 | 76306965 | ID=MS.gene072074.t1.exon11;Parent=MS.gene072074.t1 |
chr2.4 | CDS | 76306965 | 76307183 | 76306965 | ID=cds.MS.gene072074.t1;Parent=MS.gene072074.t1 |
Gene Sequence |
Protein sequence |