Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073047.t1 | XP_003603580.1 | 81.8 | 303 | 46 | 4 | 1 | 302 | 1 | 295 | 9.30E-123 | 449.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073047.t1 | Q6H500 | 49.1 | 163 | 80 | 2 | 58 | 218 | 53 | 214 | 1.3e-27 | 125.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073047.t1 | G7J2W2 | 81.8 | 303 | 46 | 4 | 1 | 302 | 1 | 295 | 6.7e-123 | 449.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073047.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene073047 | -0.820542 | 6.49E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene073047 | -0.834474 | 2.94E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene073047 | -0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene073047 | -0.83495 | 2.23E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene073047 | -0.842484 | 2.51E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene073047 | -0.857355 | 1.73E-62 | -1.69E-46 |
| MS.gene050165 | MS.gene073047 | -0.855611 | 5.62E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene073047 | -0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene073047 | 0.844905 | 5.66E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene073047 | -0.855401 | 6.47E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene073047 | -0.824961 | 6.08E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene073047 | -0.833229 | 6.01E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene073047 | -0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene050832 | MS.gene073047 | 0.815702 | 8.07E-52 | -1.69E-46 |
| MS.gene050833 | MS.gene073047 | 0.817342 | 3.47E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene073047 | -0.820514 | 6.59E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene073047 | -0.821414 | 4.09E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene073047 | -0.805605 | 1.23E-49 | -1.69E-46 |
| MS.gene051579 | MS.gene073047 | 0.843258 | 1.57E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene073047 | -0.818699 | 1.71E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene073047 | -0.805626 | 1.22E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene073047 | -0.80423 | 2.39E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene073047 | -0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene073047 | -0.835071 | 2.08E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene073047 | -0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene073047 | -0.831884 | 1.30E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene073047 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene073047 | -0.832347 | 9.95E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene073047 | -0.830361 | 3.07E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene073047 | 0.812284 | 4.58E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene073047 | -0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene073047 | 0.857158 | 1.98E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene073047 | -0.826848 | 2.17E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene073047 | -0.829306 | 5.54E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene073047 | -0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene073047 | -0.83375 | 4.46E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene073047 | -0.847971 | 8.25E-60 | -1.69E-46 |
| MS.gene059479 | MS.gene073047 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene073047 | -0.868969 | 4.40E-66 | -1.69E-46 |
| MS.gene059718 | MS.gene073047 | -0.814622 | 1.40E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene073047 | -0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene073047 | 0.83139 | 1.72E-55 | -1.69E-46 |
| MS.gene060694 | MS.gene073047 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene073047 | -0.800792 | 1.22E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene073047 | -0.818089 | 2.35E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene073047 | -0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene073047 | -0.803338 | 3.66E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073047.t1 | MTR_3g109310 | 89.109 | 303 | 24 | 4 | 1 | 302 | 1 | 295 | 0.0 | 543 |
| MS.gene073047.t1 | MTR_1g008990 | 57.383 | 298 | 102 | 12 | 21 | 302 | 51 | 339 | 2.98e-84 | 257 |
| MS.gene073047.t1 | MTR_1g008990 | 62.437 | 197 | 57 | 6 | 21 | 202 | 51 | 245 | 5.82e-59 | 189 |
| MS.gene073047.t1 | MTR_3g110010 | 81.746 | 126 | 23 | 0 | 132 | 257 | 633 | 758 | 2.59e-55 | 191 |
| MS.gene073047.t1 | MTR_3g109982 | 80.952 | 126 | 24 | 0 | 132 | 257 | 649 | 774 | 7.70e-55 | 190 |
| MS.gene073047.t1 | MTR_1g080920 | 48.611 | 144 | 67 | 4 | 98 | 238 | 177 | 316 | 1.11e-22 | 97.4 |
| MS.gene073047.t1 | MTR_7g115120 | 50.000 | 138 | 62 | 3 | 78 | 215 | 150 | 280 | 2.49e-21 | 93.2 |
| MS.gene073047.t1 | MTR_7g115140 | 41.322 | 121 | 69 | 1 | 80 | 200 | 88 | 206 | 5.16e-18 | 81.3 |
| MS.gene073047.t1 | MTR_1g022495 | 32.203 | 118 | 80 | 0 | 100 | 217 | 2 | 119 | 1.23e-12 | 65.1 |
| MS.gene073047.t1 | MTR_8g015250 | 40.426 | 94 | 53 | 1 | 123 | 216 | 69 | 159 | 8.80e-11 | 60.5 |
| MS.gene073047.t1 | MTR_4g070860 | 35.484 | 93 | 60 | 0 | 115 | 207 | 17 | 109 | 8.90e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073047.t1 | AT5G24800 | 45.148 | 237 | 102 | 9 | 73 | 302 | 62 | 277 | 1.91e-45 | 155 |
| MS.gene073047.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 122 | 252 | 1.42e-19 | 87.4 |
| MS.gene073047.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 129 | 259 | 1.47e-19 | 87.4 |
| MS.gene073047.t1 | AT5G28770 | 52.000 | 100 | 46 | 1 | 102 | 201 | 129 | 226 | 1.38e-15 | 75.5 |
| MS.gene073047.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 2.37e-13 | 70.5 |
| MS.gene073047.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 2.53e-13 | 70.5 |
| MS.gene073047.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 2.71e-13 | 70.1 |
| MS.gene073047.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 3.05e-13 | 70.1 |
| MS.gene073047.t1 | AT3G54620 | 46.429 | 84 | 45 | 0 | 126 | 209 | 229 | 312 | 5.22e-11 | 63.2 |
Find 66 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTCAGCCATCTATTTA+TGG | 0.124761 | 3.3:+89557721 | MS.gene073047:CDS |
| TTTGGTTTATTAGCTGAAAC+TGG | 0.195300 | 3.3:-89557854 | None:intergenic |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | 3.3:+89558414 | MS.gene073047:CDS |
| TTTGACAGAAATACCTTCTA+TGG | 0.244115 | 3.3:-89557988 | None:intergenic |
| CTATGAGTTGTGTAAATATT+TGG | 0.245467 | 3.3:+89558884 | MS.gene073047:CDS |
| ATATTATTCTCTTTGTTGTT+TGG | 0.273240 | 3.3:-89557872 | None:intergenic |
| AGTTTACCGGTAGGAGAGTT+TGG | 0.295352 | 3.3:-89554944 | None:intergenic |
| AATTCGAATCTTGCTGGGTT+TGG | 0.309808 | 3.3:+89558808 | MS.gene073047:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.316743 | 3.3:+89558816 | MS.gene073047:CDS |
| GTGCACAATTCGAATCTTGC+TGG | 0.321584 | 3.3:+89558802 | MS.gene073047:CDS |
| AGCACTGATGGTGGAATGTT+TGG | 0.379902 | 3.3:-89557692 | None:intergenic |
| AATGTTTGGGAGTGAAGTTT+TGG | 0.394976 | 3.3:-89557678 | None:intergenic |
| ATTTCCCTGCAGGACATTGA+TGG | 0.400011 | 3.3:-89558746 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 3.3:-89558713 | None:intergenic |
| TGAATCTCGATTACGAGTTT+CGG | 0.410788 | 3.3:+89554865 | MS.gene073047:CDS |
| ACAATGATGTCGTCGACAAT+GGG | 0.419225 | 3.3:+89558848 | MS.gene073047:CDS |
| TTGATATGAAACGCCATAGA+AGG | 0.425277 | 3.3:+89557975 | MS.gene073047:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 3.3:+89558600 | MS.gene073047:intron |
| TTTGTCTGAACTTGAGTCTC+AGG | 0.431765 | 3.3:+89558144 | MS.gene073047:CDS |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 3.3:-89558776 | None:intergenic |
| TCCGACGAGGATAATGAATC+AGG | 0.453955 | 3.3:+89557926 | MS.gene073047:CDS |
| GTATCCAAGTCTTGCCGATA+CGG | 0.463283 | 3.3:+89554887 | MS.gene073047:CDS |
| CAGCCATCTATTTATGGCAC+TGG | 0.467277 | 3.3:+89557727 | MS.gene073047:CDS |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 3.3:+89558741 | MS.gene073047:CDS |
| ATACCAGTGCCATAAATAGA+TGG | 0.477311 | 3.3:-89557730 | None:intergenic |
| TGCACAATTCGAATCTTGCT+GGG | 0.484135 | 3.3:+89558803 | MS.gene073047:CDS |
| ACAAAGAGAATAATATCAAA+GGG | 0.493368 | 3.3:+89557879 | MS.gene073047:CDS |
| CACAACTCATAGCATTGCTT+AGG | 0.501122 | 3.3:-89558873 | None:intergenic |
| TACAATGATGTCGTCGACAA+TGG | 0.501669 | 3.3:+89558847 | MS.gene073047:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 3.3:-89558742 | None:intergenic |
| CGCTTTCCAAACTCTCCTAC+CGG | 0.524112 | 3.3:+89554938 | MS.gene073047:CDS |
| GCCTCCGTATCGGCAAGACT+TGG | 0.526307 | 3.3:-89554891 | None:intergenic |
| TTGTCGACGACATCATTGTA+AGG | 0.529396 | 3.3:-89558844 | None:intergenic |
| TTGGTTTATTAGCTGAAACT+GGG | 0.535446 | 3.3:-89557853 | None:intergenic |
| AGGCACTATTATTTCCCTGC+AGG | 0.536074 | 3.3:-89558756 | None:intergenic |
| GCACTGATGGTGGAATGTTT+GGG | 0.539183 | 3.3:-89557691 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | 3.3:+89558492 | MS.gene073047:CDS |
| AACAAAGAGAATAATATCAA+AGG | 0.546304 | 3.3:+89557878 | MS.gene073047:CDS |
| GGAAATAATAGTGCCTCATA+CGG | 0.548614 | 3.3:+89558763 | MS.gene073047:CDS |
| GATACGGAGGCATTCATGAC+CGG | 0.550151 | 3.3:+89554903 | MS.gene073047:CDS |
| GTGAGTCAGCCAAGAGGTCA+AGG | 0.556802 | 3.3:+89558104 | MS.gene073047:CDS |
| ACCTGATTCATTATCCTCGT+CGG | 0.562154 | 3.3:-89557927 | None:intergenic |
| AGAATCAATAGTAGCACTGA+TGG | 0.570342 | 3.3:-89557704 | None:intergenic |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 3.3:-89558641 | None:intergenic |
| CCGGCGAGCGATGGCAACAA+CGG | 0.577221 | 3.3:+89554821 | None:intergenic |
| ATCAATAGTAGCACTGATGG+TGG | 0.581341 | 3.3:-89557701 | None:intergenic |
| GATTCATTATCCTCGTCGGA+TGG | 0.582930 | 3.3:-89557923 | None:intergenic |
| GAAAGCGGCGGAGCAAACTC+CGG | 0.584176 | 3.3:-89554922 | None:intergenic |
| GGTCATGAATGCCTCCGTAT+CGG | 0.589824 | 3.3:-89554901 | None:intergenic |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 3.3:+89558778 | MS.gene073047:CDS |
| AATATCAAAGGGACATCAAG+TGG | 0.598499 | 3.3:+89557890 | MS.gene073047:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 3.3:+89558774 | MS.gene073047:CDS |
| AATAATAGTGCCTCATACGG+TGG | 0.620063 | 3.3:+89558766 | MS.gene073047:CDS |
| TCCAAGTCTTGCCGATACGG+AGG | 0.642233 | 3.3:+89554890 | MS.gene073047:CDS |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 3.3:+89558742 | MS.gene073047:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | 3.3:+89558438 | MS.gene073047:CDS |
| TAGGAGAGTTTGGAAAGCGG+CGG | 0.671217 | 3.3:-89554934 | None:intergenic |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 3.3:+89558594 | MS.gene073047:intron |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.672836 | 3.3:+89558107 | MS.gene073047:CDS |
| CGGTAGGAGAGTTTGGAAAG+CGG | 0.687279 | 3.3:-89554937 | None:intergenic |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 3.3:-89558694 | None:intergenic |
| CTAATTGTGAGTCAGCCAAG+AGG | 0.709587 | 3.3:+89558098 | MS.gene073047:CDS |
| TTCATCTGATCCATCCGACG+AGG | 0.710432 | 3.3:+89557913 | MS.gene073047:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 3.3:-89558723 | None:intergenic |
| CAATGATGTCGTCGACAATG+GGG | 0.731606 | 3.3:+89558849 | MS.gene073047:CDS |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 3.3:-89558730 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAATTTCAAAATAAAAA+AGG | + | chr3.3:89556138-89556157 | MS.gene073047:intron | 10.0% |
| !! | AATATAACAATTGTTATGAA+GGG | + | chr3.3:89556069-89556088 | MS.gene073047:intron | 15.0% |
| !! | ACAAATAGAGTTAAATTTAT+AGG | - | chr3.3:89555171-89555190 | None:intergenic | 15.0% |
| !! | ATAAAGGAAAATGAATTTAT+TGG | + | chr3.3:89555809-89555828 | MS.gene073047:intron | 15.0% |
| !! | CTAAAATAAATTCTTCTTAA+GGG | - | chr3.3:89557554-89557573 | None:intergenic | 15.0% |
| !! | TATTAGTAGTATAATATTAG+TGG | + | chr3.3:89555601-89555620 | MS.gene073047:intron | 15.0% |
| !! | TTAATATAATTAATCTCGTT+AGG | + | chr3.3:89556549-89556568 | MS.gene073047:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr3.3:89558579-89558598 | MS.gene073047:intron | 15.0% |
| !!! | CTCTTGTTTATTTTTTTTTT+TGG | - | chr3.3:89556597-89556616 | None:intergenic | 15.0% |
| !!! | TCTAAAACTTATAAATTGAT+TGG | - | chr3.3:89555890-89555909 | None:intergenic | 15.0% |
| !!! | TCTAAAATAAATTCTTCTTA+AGG | - | chr3.3:89557555-89557574 | None:intergenic | 15.0% |
| !!! | TGAATTTCATTTTTTTTTGA+GGG | - | chr3.3:89556727-89556746 | None:intergenic | 15.0% |
| !!! | TTGAATTTCATTTTTTTTTG+AGG | - | chr3.3:89556728-89556747 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTAAAGCAAA+CGG | + | chr3.3:89556406-89556425 | MS.gene073047:intron | 15.0% |
| !!! | TTTTATTTTATTTGAAGACA+TGG | - | chr3.3:89555131-89555150 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAGAAATGAAG+AGG | + | chr3.3:89557075-89557094 | MS.gene073047:intron | 15.0% |
| !! | AAAAACTATAAACTACTAGT+AGG | + | chr3.3:89556845-89556864 | MS.gene073047:intron | 20.0% |
| !! | AAAACTATAAACTACTAGTA+GGG | + | chr3.3:89556846-89556865 | MS.gene073047:intron | 20.0% |
| !! | AAAGAATATTAATCTTGTGT+AGG | - | chr3.3:89555639-89555658 | None:intergenic | 20.0% |
| !! | AACAAAAAATACTATATGGT+TGG | + | chr3.3:89557316-89557335 | MS.gene073047:intron | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | chr3.3:89557878-89557897 | MS.gene073047:CDS | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | chr3.3:89557879-89557898 | MS.gene073047:CDS | 20.0% |
| !! | AGATTAATATTCTTTGCATT+CGG | + | chr3.3:89555644-89555663 | MS.gene073047:intron | 20.0% |
| !! | ATATAACAATTGTTATGAAG+GGG | + | chr3.3:89556070-89556089 | MS.gene073047:intron | 20.0% |
| !! | CAACAACAAAAAATACTATA+TGG | + | chr3.3:89557312-89557331 | MS.gene073047:intron | 20.0% |
| !! | GAATATAACAATTGTTATGA+AGG | + | chr3.3:89556068-89556087 | MS.gene073047:intron | 20.0% |
| !!! | AAACTTTAAAAGATACTACA+TGG | + | chr3.3:89557283-89557302 | MS.gene073047:intron | 20.0% |
| !!! | AAATTAATAGTTTTACACTG+TGG | - | chr3.3:89556783-89556802 | None:intergenic | 20.0% |
| !!! | AATCAAATACATCAGTTTTT+TGG | + | chr3.3:89555307-89555326 | MS.gene073047:intron | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr3.3:89558194-89558213 | MS.gene073047:intron | 20.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | chr3.3:89557875-89557894 | None:intergenic | 20.0% |
| !!! | CATATAGTATTTTTTGTTGT+TGG | - | chr3.3:89557314-89557333 | None:intergenic | 20.0% |
| !!! | GATTCTTATTCAAATTTTTG+AGG | - | chr3.3:89556904-89556923 | None:intergenic | 20.0% |
| !!! | TACTAGGTTTATCATTTTTT+TGG | + | chr3.3:89556499-89556518 | MS.gene073047:intron | 20.0% |
| !!! | TGTTTTTTTTTAAAGCAAAC+GGG | + | chr3.3:89556407-89556426 | MS.gene073047:intron | 20.0% |
| !!! | TTAATAGAGAAAGTTTTACA+CGG | + | chr3.3:89556635-89556654 | MS.gene073047:intron | 20.0% |
| !!! | TTAGTGTCTTATTATTTACT+AGG | + | chr3.3:89556483-89556502 | MS.gene073047:intron | 20.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | chr3.3:89558414-89558433 | MS.gene073047:CDS | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | chr3.3:89558027-89558046 | MS.gene073047:intron | 25.0% |
| ! | ACTCTATTTGTTTAGTAAGT+TGG | + | chr3.3:89555180-89555199 | MS.gene073047:intron | 25.0% |
| ! | AGATTCTTGGCATTAAAAAA+AGG | - | chr3.3:89555558-89555577 | None:intergenic | 25.0% |
| ! | AGTAGTATAATATTAGTGGT+GGG | + | chr3.3:89555605-89555624 | MS.gene073047:intron | 25.0% |
| ! | ATGACTCTTCAAATGAATAA+AGG | + | chr3.3:89555793-89555812 | MS.gene073047:intron | 25.0% |
| ! | ATTGAGATATATGAGAGAAA+GGG | + | chr3.3:89555343-89555362 | MS.gene073047:intron | 25.0% |
| ! | CAATTCTTCAAATGTAACTT+AGG | - | chr3.3:89555933-89555952 | None:intergenic | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | chr3.3:89558884-89558903 | MS.gene073047:CDS | 25.0% |
| ! | CTCAACTTGAAAAATGTATA+TGG | + | chr3.3:89557260-89557279 | MS.gene073047:intron | 25.0% |
| ! | TAGTAGTATAATATTAGTGG+TGG | + | chr3.3:89555604-89555623 | MS.gene073047:intron | 25.0% |
| ! | TATAACAATTGTTATGAAGG+GGG | + | chr3.3:89556071-89556090 | MS.gene073047:intron | 25.0% |
| ! | TCTCAATTTCATTTGATAGA+TGG | - | chr3.3:89556931-89556950 | None:intergenic | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | chr3.3:89558367-89558386 | None:intergenic | 25.0% |
| ! | TTAATCAACGTTTATATCTC+TGG | + | chr3.3:89555847-89555866 | MS.gene073047:intron | 25.0% |
| ! | TTATTCATTTGAAGAGTCAT+GGG | - | chr3.3:89555793-89555812 | None:intergenic | 25.0% |
| ! | TTTATTCATTTGAAGAGTCA+TGG | - | chr3.3:89555794-89555813 | None:intergenic | 25.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | chr3.3:89557802-89557821 | MS.gene073047:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | chr3.3:89557818-89557837 | MS.gene073047:intron | 25.0% |
| !! | CGAAATTAATATAAAGGTAC+AGG | + | chr3.3:89556872-89556891 | MS.gene073047:intron | 25.0% |
| !! | CTTTAAAAAAAAACAACGAC+CGG | - | chr3.3:89556402-89556421 | None:intergenic | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | chr3.3:89558262-89558281 | MS.gene073047:intron | 25.0% |
| !! | TGGAAATTTTGCTTAAAAGA+GGG | + | chr3.3:89555372-89555391 | MS.gene073047:intron | 25.0% |
| !! | TTGGAAATTTTGCTTAAAAG+AGG | + | chr3.3:89555371-89555390 | MS.gene073047:intron | 25.0% |
| !!! | AAGTTTGTTCTTGTTATTTC+CGG | - | chr3.3:89555094-89555113 | None:intergenic | 25.0% |
| !!! | AGACTCTTTTTTTTCATTTG+AGG | - | chr3.3:89555764-89555783 | None:intergenic | 25.0% |
| !!! | AGTTTTTTGGCTGATAATTT+GGG | + | chr3.3:89555320-89555339 | MS.gene073047:intron | 25.0% |
| !!! | ATACATTTTTCAAGTTGAGT+TGG | - | chr3.3:89557259-89557278 | None:intergenic | 25.0% |
| !!! | GACTCTTTTTTTTCATTTGA+GGG | - | chr3.3:89555763-89555782 | None:intergenic | 25.0% |
| !!! | GGGTATCGAAATTAATATAA+AGG | + | chr3.3:89556866-89556885 | MS.gene073047:intron | 25.0% |
| !!! | TATTCAAATTTTTGAGGTCT+TGG | - | chr3.3:89556898-89556917 | None:intergenic | 25.0% |
| AAACTGATTGTTTAGTGATG+TGG | - | chr3.3:89558644-89558663 | None:intergenic | 30.0% | |
| AACGTTTATATCTCTGGTTA+GGG | + | chr3.3:89555853-89555872 | MS.gene073047:intron | 30.0% | |
| AATGTCAAACTACATGTATG+AGG | - | chr3.3:89557801-89557820 | None:intergenic | 30.0% | |
| AGAAATCAAGACAAGATTCT+TGG | - | chr3.3:89555571-89555590 | None:intergenic | 30.0% | |
| ATATTTGTACGACTATAGCT+TGG | - | chr3.3:89555738-89555757 | None:intergenic | 30.0% | |
| ATCACTTCATCAAATCACAT+AGG | - | chr3.3:89557478-89557497 | None:intergenic | 30.0% | |
| ATTATATAACCATTCTCTCG+TGG | - | chr3.3:89555998-89556017 | None:intergenic | 30.0% | |
| CATGCTTCAATTGAAATAGT+AGG | - | chr3.3:89558291-89558310 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | chr3.3:89558368-89558387 | None:intergenic | 30.0% | |
| GATTGAGATATATGAGAGAA+AGG | + | chr3.3:89555342-89555361 | MS.gene073047:intron | 30.0% | |
| GCTCACAAAAAATCTTCATA+AGG | - | chr3.3:89555455-89555474 | None:intergenic | 30.0% | |
| TACTAGTCAACAATTTCATG+AGG | + | chr3.3:89558438-89558457 | MS.gene073047:CDS | 30.0% | |
| TATAGAGACAGATTGTAAGA+CGG | + | chr3.3:89557197-89557216 | MS.gene073047:intron | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | chr3.3:89558061-89558080 | MS.gene073047:intron | 30.0% | |
| TTGAACGAAAACCTAAAGTA+GGG | + | chr3.3:89555416-89555435 | MS.gene073047:intron | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | chr3.3:89557856-89557875 | None:intergenic | 30.0% | |
| TTTGACAGAAATACCTTCTA+TGG | - | chr3.3:89557991-89558010 | None:intergenic | 30.0% | |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | chr3.3:89558163-89558182 | MS.gene073047:intron | 30.0% |
| ! | GGAAATTTTGCTTAAAAGAG+GGG | + | chr3.3:89555373-89555392 | MS.gene073047:intron | 30.0% |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | chr3.3:89557857-89557876 | None:intergenic | 30.0% |
| ! | TTTTGTGAGCAAAAAAGACT+TGG | + | chr3.3:89555465-89555484 | MS.gene073047:intron | 30.0% |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | chr3.3:89558366-89558385 | MS.gene073047:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | chr3.3:89558198-89558217 | MS.gene073047:intron | 30.0% |
| !!! | CAGTTTTTTGGCTGATAATT+TGG | + | chr3.3:89555319-89555338 | MS.gene073047:intron | 30.0% |
| AAAAATGATCCACGAGAGAA+TGG | + | chr3.3:89555986-89556005 | MS.gene073047:intron | 35.0% | |
| AAAACCTAAAGTAGGGATGT+GGG | + | chr3.3:89555423-89555442 | MS.gene073047:intron | 35.0% | |
| AATATCAAAGGGACATCAAG+TGG | + | chr3.3:89557890-89557909 | MS.gene073047:CDS | 35.0% | |
| ACTTTGTAACATCCATGTGA+AGG | + | chr3.3:89557498-89557517 | MS.gene073047:intron | 35.0% | |
| AGAAAGAGAGAAGAGTTTAC+CGG | - | chr3.3:89554960-89554979 | None:intergenic | 35.0% | |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr3.3:89558594-89558613 | MS.gene073047:intron | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | chr3.3:89557733-89557752 | None:intergenic | 35.0% | |
| CAACGTTTATATCTCTGGTT+AGG | + | chr3.3:89555852-89555871 | MS.gene073047:intron | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | chr3.3:89558224-89558243 | MS.gene073047:intron | 35.0% | |
| CATGAAAAGGTTACATAAGC+TGG | - | chr3.3:89557602-89557621 | None:intergenic | 35.0% | |
| CCTGCTATTCAATCATGAAA+AGG | - | chr3.3:89557615-89557634 | None:intergenic | 35.0% | |
| CGAATGAATACTTCAAGACT+AGG | + | chr3.3:89556806-89556825 | MS.gene073047:intron | 35.0% | |
| CTTTGTAACATCCATGTGAA+GGG | + | chr3.3:89557499-89557518 | MS.gene073047:intron | 35.0% | |
| GATTCTCAGCCATCTATTTA+TGG | + | chr3.3:89557721-89557740 | MS.gene073047:CDS | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | chr3.3:89558763-89558782 | MS.gene073047:CDS | 35.0% | |
| GGATCAATTATGTGTAATCG+TGG | - | chr3.3:89556762-89556781 | None:intergenic | 35.0% | |
| GTTGAACGAAAACCTAAAGT+AGG | + | chr3.3:89555415-89555434 | MS.gene073047:intron | 35.0% | |
| TAAAAGAGGGGAAGTGAAAA+AGG | + | chr3.3:89555385-89555404 | MS.gene073047:intron | 35.0% | |
| TGAATCTCGATTACGAGTTT+CGG | + | chr3.3:89554865-89554884 | MS.gene073047:CDS | 35.0% | |
| TGAGCACATCATTTATGTAG+AGG | + | chr3.3:89557350-89557369 | MS.gene073047:intron | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | chr3.3:89557975-89557994 | MS.gene073047:CDS | 35.0% | |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | chr3.3:89557681-89557700 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | chr3.3:89557707-89557726 | None:intergenic | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | chr3.3:89557643-89557662 | MS.gene073047:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | chr3.3:89557680-89557699 | None:intergenic | 35.0% |
| ! | CCTTTTCATGATTGAATAGC+AGG | + | chr3.3:89557612-89557631 | MS.gene073047:intron | 35.0% |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | chr3.3:89557640-89557659 | MS.gene073047:CDS | 35.0% |
| ! | TAGAGAAAGTTTTACACGGT+CGG | + | chr3.3:89556639-89556658 | MS.gene073047:intron | 35.0% |
| ! | TTTGAGACAATTTCTCATGC+AGG | + | chr3.3:89557114-89557133 | MS.gene073047:intron | 35.0% |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | chr3.3:89557736-89557755 | MS.gene073047:intron | 35.0% |
| !! | CTACATCTGATTTTAGCACT+CGG | - | chr3.3:89558477-89558496 | None:intergenic | 35.0% |
| !! | CTCTCGTGGATCATTTTTAT+TGG | - | chr3.3:89555984-89556003 | None:intergenic | 35.0% |
| !! | GAATACTGATAGCGTGTTTT+TGG | - | chr3.3:89557147-89557166 | None:intergenic | 35.0% |
| AAATGCACTCCTAACGTAAC+CGG | + | chr3.3:89556380-89556399 | MS.gene073047:intron | 40.0% | |
| AATAATAGTGCCTCATACGG+TGG | + | chr3.3:89558766-89558785 | MS.gene073047:CDS | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | chr3.3:89558848-89558867 | MS.gene073047:CDS | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | chr3.3:89557930-89557949 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | chr3.3:89558071-89558090 | MS.gene073047:intron | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | chr3.3:89558876-89558895 | None:intergenic | 40.0% | |
| CTTTAAATTCAAGCAGCCGT+TGG | + | chr3.3:89555671-89555690 | MS.gene073047:intron | 40.0% | |
| GAAAACCTAAAGTAGGGATG+TGG | + | chr3.3:89555422-89555441 | MS.gene073047:intron | 40.0% | |
| GAGATATATGAGAGAAAGGG+AGG | + | chr3.3:89555346-89555365 | MS.gene073047:intron | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | chr3.3:89558847-89558866 | MS.gene073047:CDS | 40.0% | |
| TAGTGTGAACGCATGACTTT+GGG | + | chr3.3:89555524-89555543 | MS.gene073047:intron | 40.0% | |
| TCTAAGTTCCACCAATCCAA+CGG | - | chr3.3:89555690-89555709 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | chr3.3:89557827-89557846 | MS.gene073047:intron | 40.0% | |
| TGAGGAATGTTGAGATGTGT+AGG | - | chr3.3:89557783-89557802 | None:intergenic | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | chr3.3:89558803-89558822 | MS.gene073047:CDS | 40.0% | |
| TGTGAGCAAAAAAGACTTGG+TGG | + | chr3.3:89555468-89555487 | MS.gene073047:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | chr3.3:89558072-89558091 | MS.gene073047:intron | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | chr3.3:89558847-89558866 | None:intergenic | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | chr3.3:89558144-89558163 | MS.gene073047:CDS | 40.0% | |
| ! | GTGAGCAAAAAAGACTTGGT+GGG | + | chr3.3:89555469-89555488 | MS.gene073047:intron | 40.0% |
| ! | TATGAGAGAAAGGGAGGTAT+TGG | + | chr3.3:89555352-89555371 | MS.gene073047:intron | 40.0% |
| !! | AACTGAAAGTACTGATGACG+TGG | + | chr3.3:89555022-89555041 | MS.gene073047:intron | 40.0% |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | chr3.3:89557704-89557723 | None:intergenic | 40.0% |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | chr3.3:89558384-89558403 | MS.gene073047:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | chr3.3:89558492-89558511 | MS.gene073047:CDS | 40.0% |
| !!! | CTCTGTTTTTACCCTTCACA+TGG | - | chr3.3:89557513-89557532 | None:intergenic | 40.0% |
| AAACAACGACCGGTTACGTT+AGG | - | chr3.3:89556392-89556411 | None:intergenic | 45.0% | |
| AATTCAAGCAGCCGTTGGAT+TGG | + | chr3.3:89555676-89555695 | MS.gene073047:intron | 45.0% | |
| AGAGAGAAGAGTTTACCGGT+AGG | - | chr3.3:89554956-89554975 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | chr3.3:89558759-89558778 | None:intergenic | 45.0% | |
| AGTGTGAACGCATGACTTTG+GGG | + | chr3.3:89555525-89555544 | MS.gene073047:intron | 45.0% | |
| AGTTTACCGGTAGGAGAGTT+TGG | - | chr3.3:89554947-89554966 | None:intergenic | 45.0% | |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr3.3:89558749-89558768 | None:intergenic | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | chr3.3:89558849-89558868 | MS.gene073047:CDS | 45.0% | |
| CAGCCATCTATTTATGGCAC+TGG | + | chr3.3:89557727-89557746 | MS.gene073047:CDS | 45.0% | |
| CTAATTGTGAGTCAGCCAAG+AGG | + | chr3.3:89558098-89558117 | MS.gene073047:CDS | 45.0% | |
| CTAGTGTGAACGCATGACTT+TGG | + | chr3.3:89555523-89555542 | MS.gene073047:intron | 45.0% | |
| GAGACAATTTCTCATGCAGG+AGG | + | chr3.3:89557117-89557136 | MS.gene073047:intron | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | chr3.3:89557926-89557945 | None:intergenic | 45.0% | |
| GGAATCCTACCATGCAGTTT+GGG | + | chr3.3:89555043-89555062 | MS.gene073047:intron | 45.0% | |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr3.3:89558600-89558619 | MS.gene073047:intron | 45.0% | |
| GTATCCAAGTCTTGCCGATA+CGG | + | chr3.3:89554887-89554906 | MS.gene073047:CDS | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | chr3.3:89558802-89558821 | MS.gene073047:CDS | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | chr3.3:89557926-89557945 | MS.gene073047:CDS | 45.0% | |
| TCGCTCAACGCTTACTTAAC+CGG | + | chr3.3:89555072-89555091 | MS.gene073047:intron | 45.0% | |
| TGGAATCCTACCATGCAGTT+TGG | + | chr3.3:89555042-89555061 | MS.gene073047:intron | 45.0% | |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr3.3:89558697-89558716 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr3.3:89558733-89558752 | None:intergenic | 45.0% |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr3.3:89558116-89558135 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | chr3.3:89557695-89557714 | None:intergenic | 45.0% |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | chr3.3:89557694-89557713 | None:intergenic | 45.0% |
| !!! | AATATGTTAATTTTTTTTTT+AGG | - | chr3.3:89556041-89556060 | None:intergenic | 5.0% |
| !!! | ATTTTTACTTATATATAATT+TGG | - | chr3.3:89555252-89555271 | None:intergenic | 5.0% |
| ATGAAGGGGGAGAGATAGAG+AGG | + | chr3.3:89556084-89556103 | MS.gene073047:intron | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr3.3:89558742-89558761 | MS.gene073047:CDS | 50.0% | |
| CGCTTTCCAAACTCTCCTAC+CGG | + | chr3.3:89554938-89554957 | MS.gene073047:CDS | 50.0% | |
| CGGTAGGAGAGTTTGGAAAG+CGG | - | chr3.3:89554940-89554959 | None:intergenic | 50.0% | |
| GCAACCCACATCCCTACTTT+AGG | - | chr3.3:89555430-89555449 | None:intergenic | 50.0% | |
| GGTCATGAATGCCTCCGTAT+CGG | - | chr3.3:89554904-89554923 | None:intergenic | 50.0% | |
| GTGTGAACGCATGACTTTGG+GGG | + | chr3.3:89555526-89555545 | MS.gene073047:intron | 50.0% | |
| TAGGAGAGTTTGGAAAGCGG+CGG | - | chr3.3:89554937-89554956 | None:intergenic | 50.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | chr3.3:89557913-89557932 | MS.gene073047:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr3.3:89558726-89558745 | None:intergenic | 50.0% | |
| !! | GATACGGAGGCATTCATGAC+CGG | + | chr3.3:89554903-89554922 | MS.gene073047:CDS | 50.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr3.3:89558779-89558798 | None:intergenic | 55.0% | |
| AAGGGGGAGAGATAGAGAGG+AGG | + | chr3.3:89556087-89556106 | MS.gene073047:intron | 55.0% | |
| AGGGGGAGAGATAGAGAGGA+GGG | + | chr3.3:89556088-89556107 | MS.gene073047:intron | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr3.3:89558107-89558126 | MS.gene073047:CDS | 55.0% | |
| AGTGTGAGGTAGGGAGAGAG+GGG | + | chr3.3:89556111-89556130 | MS.gene073047:intron | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr3.3:89558716-89558735 | None:intergenic | 55.0% | |
| CCTACCATGCAGTTTGGGTG+AGG | + | chr3.3:89555048-89555067 | MS.gene073047:intron | 55.0% | |
| CCTCACCCAAACTGCATGGT+AGG | - | chr3.3:89555051-89555070 | None:intergenic | 55.0% | |
| CGATCCTCACCCAAACTGCA+TGG | - | chr3.3:89555055-89555074 | None:intergenic | 55.0% | |
| GAGTGTGAGGTAGGGAGAGA+GGG | + | chr3.3:89556110-89556129 | MS.gene073047:intron | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr3.3:89558741-89558760 | MS.gene073047:CDS | 55.0% | |
| GTGAGTCAGCCAAGAGGTCA+AGG | + | chr3.3:89558104-89558123 | MS.gene073047:CDS | 55.0% | |
| TCCAAGTCTTGCCGATACGG+AGG | + | chr3.3:89554890-89554909 | MS.gene073047:CDS | 55.0% | |
| ! | AACGCATGACTTTGGGGGTG+TGG | + | chr3.3:89555531-89555550 | MS.gene073047:intron | 55.0% |
| ! | ACGCATGACTTTGGGGGTGT+GGG | + | chr3.3:89555532-89555551 | MS.gene073047:intron | 55.0% |
| ! | AGAGGAGGGAGTGTGAGGTA+GGG | + | chr3.3:89556102-89556121 | MS.gene073047:intron | 55.0% |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr3.3:89558745-89558764 | None:intergenic | 55.0% |
| ! | GATAGAGAGGAGGGAGTGTG+AGG | + | chr3.3:89556097-89556116 | MS.gene073047:intron | 55.0% |
| ! | TCAAGCAGCCGTTGGATTGG+TGG | + | chr3.3:89555679-89555698 | MS.gene073047:intron | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr3.3:89558774-89558793 | MS.gene073047:CDS | 55.0% |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr3.3:89558778-89558797 | MS.gene073047:CDS | 55.0% |
| GAAAGCGGCGGAGCAAACTC+CGG | - | chr3.3:89554925-89554944 | None:intergenic | 60.0% | |
| GGAGTGTGAGGTAGGGAGAG+AGG | + | chr3.3:89556109-89556128 | MS.gene073047:intron | 60.0% | |
| GTGTGAGGTAGGGAGAGAGG+GGG | + | chr3.3:89556112-89556131 | MS.gene073047:intron | 60.0% | |
| ! | GAGAGGAGGGAGTGTGAGGT+AGG | + | chr3.3:89556101-89556120 | MS.gene073047:intron | 60.0% |
| ! | GCCTCCGTATCGGCAAGACT+TGG | - | chr3.3:89554894-89554913 | None:intergenic | 60.0% |
| GAGGTAGGGAGAGAGGGGGA+GGG | + | chr3.3:89556116-89556135 | MS.gene073047:intron | 65.0% | |
| TGAGGTAGGGAGAGAGGGGG+AGG | + | chr3.3:89556115-89556134 | MS.gene073047:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89554831 | 89558912 | 89554831 | ID=MS.gene073047 |
| chr3.3 | mRNA | 89554831 | 89558912 | 89554831 | ID=MS.gene073047.t1;Parent=MS.gene073047 |
| chr3.3 | exon | 89554831 | 89554959 | 89554831 | ID=MS.gene073047.t1.exon1;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89554831 | 89554959 | 89554831 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| chr3.3 | exon | 89557634 | 89557748 | 89557634 | ID=MS.gene073047.t1.exon2;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89557634 | 89557748 | 89557634 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| chr3.3 | exon | 89557846 | 89557996 | 89557846 | ID=MS.gene073047.t1.exon3;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89557846 | 89557996 | 89557846 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| chr3.3 | exon | 89558090 | 89558165 | 89558090 | ID=MS.gene073047.t1.exon4;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89558090 | 89558165 | 89558090 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| chr3.3 | exon | 89558388 | 89558513 | 89558388 | ID=MS.gene073047.t1.exon5;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89558388 | 89558513 | 89558388 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| chr3.3 | exon | 89558601 | 89558912 | 89558601 | ID=MS.gene073047.t1.exon6;Parent=MS.gene073047.t1 |
| chr3.3 | CDS | 89558601 | 89558912 | 89558601 | ID=cds.MS.gene073047.t1;Parent=MS.gene073047.t1 |
| Gene Sequence |
| Protein sequence |
