Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08486.t1 | RHN39605.1 | 96.4 | 394 | 12 | 1 | 1 | 392 | 15 | 408 | 1.90E-221 | 778.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08486.t1 | Q9FMK9 | 64.2 | 374 | 125 | 4 | 10 | 379 | 14 | 382 | 2.3e-138 | 493.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08486.t1 | A0A396GLR9 | 96.4 | 394 | 12 | 1 | 1 | 392 | 15 | 408 | 1.4e-221 | 778.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene08486 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene049151 | MS.gene08486 | 0.815457 | 9.15E-52 | -1.69E-46 |
| MS.gene049260 | MS.gene08486 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene08486 | 0.827203 | 1.78E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene08486 | 0.843161 | 1.66E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene08486 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene08486 | 0.816878 | 4.41E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene08486 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene08486 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene08486 | -0.824482 | 7.88E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene08486 | 0.825875 | 3.69E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene08486 | 0.819815 | 9.53E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene08486 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene050987 | MS.gene08486 | 0.952676 | 1.45E-110 | -1.69E-46 |
| MS.gene05119 | MS.gene08486 | -0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene051243 | MS.gene08486 | 0.831405 | 1.70E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene08486 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene08486 | 0.827181 | 1.80E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene08486 | 0.842285 | 2.84E-58 | -1.69E-46 |
| MS.gene052302 | MS.gene08486 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene052309 | MS.gene08486 | -0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene08486 | 0.819831 | 9.45E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene08486 | 0.837168 | 6.10E-57 | -1.69E-46 |
| MS.gene052860 | MS.gene08486 | 0.800213 | 1.60E-48 | -1.69E-46 |
| MS.gene053188 | MS.gene08486 | 0.830981 | 2.16E-55 | -1.69E-46 |
| MS.gene053216 | MS.gene08486 | 0.835305 | 1.81E-56 | -1.69E-46 |
| MS.gene053559 | MS.gene08486 | 0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene08486 | 0.829928 | 3.91E-55 | -1.69E-46 |
| MS.gene054537 | MS.gene08486 | 0.848865 | 4.67E-60 | -1.69E-46 |
| MS.gene054930 | MS.gene08486 | 0.863947 | 1.73E-64 | -1.69E-46 |
| MS.gene054942 | MS.gene08486 | 0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene08486 | 0.810392 | 1.18E-50 | -1.69E-46 |
| MS.gene055230 | MS.gene08486 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene08486 | 0.819579 | 1.08E-52 | -1.69E-46 |
| MS.gene056069 | MS.gene08486 | -0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene08486 | 0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene08486 | 0.82541 | 4.76E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene08486 | 0.821993 | 3.01E-53 | -1.69E-46 |
| MS.gene057555 | MS.gene08486 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene08486 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene08486 | 0.806842 | 6.76E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene08486 | 0.810794 | 9.66E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene08486 | 0.809596 | 1.75E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene08486 | 0.820926 | 5.30E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene08486 | 0.82003 | 8.51E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene08486 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene058982 | MS.gene08486 | 0.802801 | 4.72E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene08486 | 0.81036 | 1.20E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene08486 | 0.808496 | 3.01E-50 | -1.69E-46 |
| MS.gene059317 | MS.gene08486 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene08486 | 0.848389 | 6.32E-60 | -1.69E-46 |
| MS.gene060084 | MS.gene08486 | 0.834364 | 3.13E-56 | -1.69E-46 |
| MS.gene060297 | MS.gene08486 | 0.837964 | 3.81E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene08486 | 0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene08486 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene08486 | 0.812776 | 3.58E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene08486 | 0.817751 | 2.80E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene08486 | 0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene060943 | MS.gene08486 | 0.808757 | 2.65E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene08486 | 0.818264 | 2.15E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08486.t1 | MTR_8g023770 | 95.178 | 394 | 17 | 2 | 1 | 392 | 15 | 408 | 0.0 | 773 |
| MS.gene08486.t1 | MTR_8g023780 | 94.859 | 389 | 18 | 1 | 1 | 387 | 15 | 403 | 0.0 | 763 |
| MS.gene08486.t1 | MTR_8g023780 | 95.550 | 382 | 15 | 1 | 1 | 380 | 15 | 396 | 0.0 | 756 |
| MS.gene08486.t1 | MTR_8g023780 | 94.924 | 394 | 18 | 1 | 1 | 392 | 15 | 408 | 0.0 | 753 |
| MS.gene08486.t1 | MTR_2g038080 | 48.753 | 361 | 160 | 6 | 33 | 376 | 57 | 409 | 7.12e-104 | 313 |
| MS.gene08486.t1 | MTR_2g038080 | 47.536 | 345 | 156 | 6 | 49 | 376 | 1 | 337 | 2.03e-95 | 289 |
| MS.gene08486.t1 | MTR_2g038080 | 46.263 | 281 | 127 | 5 | 113 | 376 | 4 | 277 | 2.30e-71 | 225 |
| MS.gene08486.t1 | MTR_2g038080 | 50.739 | 203 | 88 | 2 | 33 | 224 | 57 | 258 | 4.36e-61 | 198 |
| MS.gene08486.t1 | MTR_1g009460 | 89.333 | 75 | 7 | 1 | 1 | 74 | 1 | 75 | 8.02e-42 | 142 |
| MS.gene08486.t1 | MTR_1g051760 | 26.371 | 383 | 197 | 16 | 23 | 364 | 42 | 380 | 5.41e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08486.t1 | AT5G63140 | 64.171 | 374 | 125 | 4 | 10 | 379 | 14 | 382 | 5.01e-178 | 501 |
| MS.gene08486.t1 | AT2G46880 | 55.556 | 378 | 157 | 6 | 9 | 380 | 13 | 385 | 5.08e-136 | 395 |
| MS.gene08486.t1 | AT2G46880 | 54.688 | 320 | 134 | 6 | 9 | 322 | 13 | 327 | 2.13e-116 | 342 |
| MS.gene08486.t1 | AT5G57140 | 45.580 | 362 | 175 | 5 | 27 | 379 | 44 | 392 | 1.36e-107 | 322 |
Find 107 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCTGAATTTCATGATTT+TGG | 0.174042 | 8.2:-72177817 | MS.gene08486:CDS |
| CCCTAGAGAGTGACCCTTCT+TGG | 0.201194 | 8.2:+72176773 | None:intergenic |
| GTACACATCATTGATGGTTT+TGG | 0.254083 | 8.2:-72176688 | MS.gene08486:CDS |
| AAACATGACAGGTGTGAAAA+TGG | 0.280769 | 8.2:-72175890 | MS.gene08486:CDS |
| CCATCAATGATGTGTACTTC+TGG | 0.298827 | 8.2:+72176694 | None:intergenic |
| CTCGATGATCAGCATCTTAC+TGG | 0.303035 | 8.2:-72175583 | MS.gene08486:CDS |
| CTGCAGAAAGCATACATAAA+AGG | 0.319147 | 8.2:-72175994 | MS.gene08486:intron |
| CGTCGATTCCTGGTTATGAT+TGG | 0.323971 | 8.2:-72176564 | MS.gene08486:CDS |
| GGAATGTTTGATTCAATTGC+AGG | 0.325974 | 8.2:+72176823 | None:intergenic |
| ATACTACTGCTTTCATTCAT+AGG | 0.331639 | 8.2:-72177599 | MS.gene08486:CDS |
| CTTTGTTATGCTGGAGGGTT+CGG | 0.337763 | 8.2:-72175724 | MS.gene08486:CDS |
| AATCTATACTTTCTTGATAG+TGG | 0.342791 | 8.2:-72176604 | MS.gene08486:CDS |
| TCCAAAGTTCCGTCGATTCC+TGG | 0.347484 | 8.2:-72176574 | MS.gene08486:CDS |
| TGGTTATGGTGTCATGGTTT+TGG | 0.349609 | 8.2:-72177794 | MS.gene08486:CDS |
| TGACTTCTGCGGCAAGCTAA+TGG | 0.357700 | 8.2:-72175755 | MS.gene08486:CDS |
| CCAGAAGTACACATCATTGA+TGG | 0.364298 | 8.2:-72176694 | MS.gene08486:CDS |
| TGGTTATGATTCCTCGGATT+CGG | 0.372148 | 8.2:-72176872 | MS.gene08486:CDS |
| ATACTTTCACATCCCCTTGC+CGG | 0.377380 | 8.2:-72175935 | MS.gene08486:CDS |
| CAATTGAATCAAACATTCCT+TGG | 0.391653 | 8.2:-72176819 | MS.gene08486:CDS |
| AGCGAACGTCTGCGAAGCTT+CGG | 0.392502 | 8.2:-72176513 | MS.gene08486:CDS |
| TTGGAGATTGGTGGTGTTCA+AGG | 0.399124 | 8.2:-72176655 | MS.gene08486:CDS |
| GGTTTCTTCACAACCTTGGT+TGG | 0.400736 | 8.2:-72175823 | MS.gene08486:CDS |
| GGGAACAATAACTTGGAGAT+TGG | 0.405429 | 8.2:-72176667 | MS.gene08486:CDS |
| CTCTGGTTTCTTCACAACCT+TGG | 0.405994 | 8.2:-72175827 | MS.gene08486:CDS |
| GGGTTCGGATACCATGCTTA+TGG | 0.406948 | 8.2:-72175709 | MS.gene08486:CDS |
| ATGAAAGGAGATAATATCTA+TGG | 0.407219 | 8.2:-72176892 | MS.gene08486:intron |
| GCAGCTTCTTTCTGAGGTGC+TGG | 0.408903 | 8.2:+72175970 | None:intergenic |
| AGCTTGGAGAAGACAGATAA+AGG | 0.411473 | 8.2:-72175646 | MS.gene08486:CDS |
| ACCAGGAATCGACGGAACTT+TGG | 0.420267 | 8.2:+72176573 | None:intergenic |
| TTCACAACCTTGGTTGGAGC+AGG | 0.430119 | 8.2:-72175817 | MS.gene08486:CDS |
| CCTAATCTTATTGTCTTCAC+TGG | 0.435390 | 8.2:-72177558 | MS.gene08486:intron |
| GCGAACGTCTGCGAAGCTTC+GGG | 0.441635 | 8.2:-72176512 | MS.gene08486:intron |
| CGGGAGTGCTCTTGCTCCAT+AGG | 0.441879 | 8.2:+72175545 | None:intergenic |
| TCAAGCCCTCACAGCAACTT+TGG | 0.443834 | 8.2:-72176540 | MS.gene08486:CDS |
| GAATCAAAACTTGTATATTC+CGG | 0.446013 | 8.2:+72175916 | None:intergenic |
| GATATACAACTTTGTTATGC+TGG | 0.461246 | 8.2:-72175733 | MS.gene08486:CDS |
| CAGCATCTTACTGGAATTGA+TGG | 0.463649 | 8.2:-72175574 | MS.gene08486:CDS |
| AAGCTGAGGTTTGATCAAAA+TGG | 0.464942 | 8.2:-72177726 | MS.gene08486:CDS |
| TGATGGCATTAGTTCTGCTT+CGG | 0.465850 | 8.2:-72175854 | MS.gene08486:CDS |
| TACCATGCTTATGGAAAGGC+TGG | 0.468350 | 8.2:-72175700 | MS.gene08486:CDS |
| TGGTGAATTCAAGATATTGC+AGG | 0.471697 | 8.2:-72177706 | MS.gene08486:CDS |
| GCAGCCAAGGCACATGTAGT+AGG | 0.472413 | 8.2:+72177765 | None:intergenic |
| GCAGATATGCACTATGCAAA+TGG | 0.475508 | 8.2:-72177681 | MS.gene08486:CDS |
| TTTGATTCATCAAACATGAC+AGG | 0.476068 | 8.2:-72175901 | MS.gene08486:CDS |
| CTCGGATTCGGCTAAATCGA+TGG | 0.479660 | 8.2:-72176860 | MS.gene08486:CDS |
| CCAGTGAAGACAATAAGATT+AGG | 0.481572 | 8.2:+72177558 | None:intergenic |
| GTGATCGTGGCCAACGAAAA+CGG | 0.487602 | 8.2:+72175783 | None:intergenic |
| AATTGAATCAAACATTCCTT+GGG | 0.488720 | 8.2:-72176818 | MS.gene08486:CDS |
| AAGAGTGGTGGTAGCTAGCT+TGG | 0.490821 | 8.2:-72175662 | MS.gene08486:CDS |
| GAATTGATGGTGAGGTCCTA+TGG | 0.492398 | 8.2:-72175561 | MS.gene08486:CDS |
| TATCTATGGTTATGATTCCT+CGG | 0.497512 | 8.2:-72176878 | MS.gene08486:CDS |
| GAAGACAGATAAAGGAAGCT+GGG | 0.498542 | 8.2:-72175638 | MS.gene08486:CDS |
| ATGGAAACGGATGGCGGTGA+TGG | 0.500335 | 8.2:-72175871 | MS.gene08486:CDS |
| ATGGAAAGGCTGGATGGTCT+CGG | 0.500554 | 8.2:-72175690 | MS.gene08486:CDS |
| ACCAAGAAGGGTCACTCTCT+AGG | 0.501348 | 8.2:-72176774 | MS.gene08486:CDS |
| AGAGTGACCCTTCTTGGTCA+TGG | 0.502217 | 8.2:+72176779 | None:intergenic |
| CCAAGAAGGGTCACTCTCTA+GGG | 0.503678 | 8.2:-72176773 | MS.gene08486:CDS |
| CTATGGAGCAAGAGCACTCC+CGG | 0.506131 | 8.2:-72175544 | MS.gene08486:intron |
| AGTTCTGCTTCGGTGAACTC+TGG | 0.508388 | 8.2:-72175844 | MS.gene08486:CDS |
| AGAAGACAGATAAAGGAAGC+TGG | 0.511022 | 8.2:-72175639 | MS.gene08486:CDS |
| CTGTCAAATCAATTAAATCA+TGG | 0.513487 | 8.2:-72175612 | MS.gene08486:CDS |
| AATTCCTACTACATGTGCCT+TGG | 0.518093 | 8.2:-72177769 | MS.gene08486:CDS |
| CACGTCTCCTGCTCCAACCA+AGG | 0.523455 | 8.2:+72175810 | None:intergenic |
| CCTCAGAAAGAAGCTGCTCC+TGG | 0.524797 | 8.2:-72175964 | MS.gene08486:CDS |
| AAACTTGTATATTCCGGCAA+GGG | 0.532425 | 8.2:+72175922 | None:intergenic |
| GGTGTGATGAAATATATTGT+TGG | 0.534953 | 8.2:-72176748 | MS.gene08486:CDS |
| TCGAACCAAAGTTGCTGTGA+GGG | 0.540916 | 8.2:+72176535 | None:intergenic |
| TACAACTTTGTTATGCTGGA+GGG | 0.549153 | 8.2:-72175729 | MS.gene08486:CDS |
| TAGGGAACCATGACCAAGAA+GGG | 0.554708 | 8.2:-72176786 | MS.gene08486:CDS |
| ATGGTCTCGGAGGGCAAGAG+TGG | 0.563926 | 8.2:-72175677 | MS.gene08486:CDS |
| CCAGGAGCAGCTTCTTTCTG+AGG | 0.564382 | 8.2:+72175964 | None:intergenic |
| GAATGAAAGCAGTAGTATTG+AGG | 0.568711 | 8.2:+72177604 | None:intergenic |
| ATGCTTATGGAAAGGCTGGA+TGG | 0.575168 | 8.2:-72175696 | MS.gene08486:CDS |
| AACAAGAGAATCAGAAGCTG+AGG | 0.584513 | 8.2:-72177740 | MS.gene08486:CDS |
| TTAGGGAACCATGACCAAGA+AGG | 0.585354 | 8.2:-72176787 | MS.gene08486:CDS |
| CGGATACCATGCTTATGGAA+AGG | 0.585787 | 8.2:-72175704 | MS.gene08486:CDS |
| ATACAACTTTGTTATGCTGG+AGG | 0.586077 | 8.2:-72175730 | MS.gene08486:CDS |
| TGAATCAAACATTCCTTGGG+TGG | 0.587546 | 8.2:-72176815 | MS.gene08486:CDS |
| TAAGATTAGGCTTCTCAGCA+AGG | 0.590661 | 8.2:+72177571 | None:intergenic |
| AAAGGCTGGATGGTCTCGGA+GGG | 0.592813 | 8.2:-72175686 | MS.gene08486:CDS |
| AAAACTTGTATATTCCGGCA+AGG | 0.600274 | 8.2:+72175921 | None:intergenic |
| GGTTGGAGCAGGAGACGTGA+AGG | 0.600894 | 8.2:-72175806 | MS.gene08486:CDS |
| GTCTCGGAGGGCAAGAGTGG+TGG | 0.601019 | 8.2:-72175674 | MS.gene08486:CDS |
| CATCGATTTAGCCGAATCCG+AGG | 0.606710 | 8.2:+72176861 | None:intergenic |
| ATCCAGCCTTTCCATAAGCA+TGG | 0.607593 | 8.2:+72175698 | None:intergenic |
| CAATCATAACCAGGAATCGA+CGG | 0.608329 | 8.2:+72176565 | None:intergenic |
| GACAGGTGTGAAAATGGAAA+CGG | 0.610026 | 8.2:-72175884 | MS.gene08486:CDS |
| AACTTGTATATTCCGGCAAG+GGG | 0.613492 | 8.2:+72175923 | None:intergenic |
| GAAAGGCTGGATGGTCTCGG+AGG | 0.616402 | 8.2:-72175687 | MS.gene08486:CDS |
| AAGACAGATAAAGGAAGCTG+GGG | 0.619330 | 8.2:-72175637 | MS.gene08486:CDS |
| AACAATAACTTGGAGATTGG+TGG | 0.620162 | 8.2:-72176664 | MS.gene08486:CDS |
| AAGTACATCCAAACAGAGTG+TGG | 0.621028 | 8.2:+72177653 | None:intergenic |
| TTCCCTAAAACAGCCACCCA+AGG | 0.622499 | 8.2:+72176802 | None:intergenic |
| ATGTGAAAGTATGCAAGACC+AGG | 0.624092 | 8.2:+72175946 | None:intergenic |
| GAAGGGTCACTCTCTAGGGA+AGG | 0.624261 | 8.2:-72176769 | MS.gene08486:CDS |
| GATCACCTCAATGACTTCTG+CGG | 0.628035 | 8.2:-72175766 | MS.gene08486:CDS |
| GCTTGCCGCAGAAGTCATTG+AGG | 0.629363 | 8.2:+72175761 | None:intergenic |
| CTCGAACCAAAGTTGCTGTG+AGG | 0.629960 | 8.2:+72176534 | None:intergenic |
| GGCTTGATCCAATCATAACC+AGG | 0.630760 | 8.2:+72176556 | None:intergenic |
| AGAAGTCATTGAGGTGATCG+TGG | 0.632151 | 8.2:+72175770 | None:intergenic |
| CAATTGCAGGAGCAAATGCA+AGG | 0.641451 | 8.2:+72176836 | None:intergenic |
| TCAATGATGTGTACTTCTGG+AGG | 0.652650 | 8.2:+72176697 | None:intergenic |
| TCTTACTGGAATTGATGGTG+AGG | 0.663700 | 8.2:-72175569 | MS.gene08486:CDS |
| TGAATTCAAGATATTGCAGG+TGG | 0.697727 | 8.2:-72177703 | MS.gene08486:CDS |
| CAGTAAGATGCTGATCATCG+AGG | 0.702332 | 8.2:+72175584 | None:intergenic |
| GGTGTGAAAATGGAAACGGA+TGG | 0.712053 | 8.2:-72175880 | MS.gene08486:CDS |
| GTGAAAATGGAAACGGATGG+CGG | 0.749816 | 8.2:-72175877 | MS.gene08486:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATACAAATCAAAA+TGG | + | chr8.2:72177674-72177693 | None:intergenic | 10.0% |
| !! | AATAATCATTTAAAAATGGA+GGG | - | chr8.2:72175193-72175212 | MS.gene08486:intron | 15.0% |
| !! | CTACAATAATCATTTAAAAA+TGG | - | chr8.2:72175189-72175208 | MS.gene08486:intron | 15.0% |
| !!! | CATTTTTAAATGATTATTGT+AGG | + | chr8.2:72175191-72175210 | None:intergenic | 15.0% |
| !! | AAATTATGCTACATATTGAA+AGG | - | chr8.2:72176822-72176841 | MS.gene08486:CDS | 20.0% |
| !! | AAGTATTATCTGAGTTTAAA+AGG | - | chr8.2:72177322-72177341 | MS.gene08486:intron | 20.0% |
| !! | AATAAAAGAAATGAAATCAC+AGG | + | chr8.2:72175096-72175115 | None:intergenic | 20.0% |
| !! | AATTATGCTACATATTGAAA+GGG | - | chr8.2:72176823-72176842 | MS.gene08486:CDS | 20.0% |
| !! | AGTATTATCTGAGTTTAAAA+GGG | - | chr8.2:72177323-72177342 | MS.gene08486:intron | 20.0% |
| !! | AGTGAACTTTAAACTATATT+TGG | - | chr8.2:72177170-72177189 | MS.gene08486:intron | 20.0% |
| !! | CAATAATCATTTAAAAATGG+AGG | - | chr8.2:72175192-72175211 | MS.gene08486:intron | 20.0% |
| !! | CATTGAAAATAAAAAGCAAA+AGG | + | chr8.2:72174835-72174854 | None:intergenic | 20.0% |
| !! | GAATTGTAGTACTATATATA+TGG | - | chr8.2:72174956-72174975 | MS.gene08486:intron | 20.0% |
| !! | GTGAACTTTAAACTATATTT+GGG | - | chr8.2:72177171-72177190 | MS.gene08486:intron | 20.0% |
| !! | TAAAGAGAAACTAGATAATT+TGG | + | chr8.2:72175888-72175907 | None:intergenic | 20.0% |
| !! | TAATTCACTCAAGTATTATA+GGG | - | chr8.2:72174997-72175016 | MS.gene08486:intron | 20.0% |
| !! | TGAACTTTAAACTATATTTG+GGG | - | chr8.2:72177172-72177191 | MS.gene08486:intron | 20.0% |
| !! | TTCTACTAGTTAATTGTAAA+TGG | - | chr8.2:72175231-72175250 | MS.gene08486:intron | 20.0% |
| !!! | GATATTTGTTATGGTATTTT+AGG | + | chr8.2:72177030-72177049 | None:intergenic | 20.0% |
| ! | AATCTATACTTTCTTGATAG+TGG | - | chr8.2:72175694-72175713 | MS.gene08486:CDS | 25.0% |
| ! | AATTGAATCAAACATTCCTT+GGG | - | chr8.2:72175480-72175499 | MS.gene08486:intron | 25.0% |
| ! | ACTAGTTAATTGTAAATGGA+TGG | - | chr8.2:72175235-72175254 | MS.gene08486:intron | 25.0% |
| ! | AGAAAACAAATTTGCATAAC+AGG | + | chr8.2:72175383-72175402 | None:intergenic | 25.0% |
| ! | AGTTATCATTACCAGTTTAT+TGG | - | chr8.2:72175336-72175355 | MS.gene08486:intron | 25.0% |
| ! | ATAGTTGAGTAAACCATAAA+TGG | - | chr8.2:72177353-72177372 | MS.gene08486:intron | 25.0% |
| ! | ATGAAAGGAGATAATATCTA+TGG | - | chr8.2:72175406-72175425 | MS.gene08486:intron | 25.0% |
| ! | CCACATGTTGAATTAAATTA+GGG | + | chr8.2:72176220-72176239 | None:intergenic | 25.0% |
| ! | CTAATTCACTCAAGTATTAT+AGG | - | chr8.2:72174996-72175015 | MS.gene08486:intron | 25.0% |
| ! | CTATAATACTTGAGTGAATT+AGG | + | chr8.2:72174998-72175017 | None:intergenic | 25.0% |
| ! | CTGTCAAATCAATTAAATCA+TGG | - | chr8.2:72176686-72176705 | MS.gene08486:CDS | 25.0% |
| ! | GAATCAAAACTTGTATATTC+CGG | + | chr8.2:72176385-72176404 | None:intergenic | 25.0% |
| ! | TAATTGTAAATGGATGGAAA+TGG | - | chr8.2:72175241-72175260 | MS.gene08486:intron | 25.0% |
| ! | TTCAGAATATAAAACTTCCA+TGG | + | chr8.2:72177613-72177632 | None:intergenic | 25.0% |
| !! | AAATTTCCTTTAGTTCCTTA+GGG | - | chr8.2:72175932-72175951 | MS.gene08486:CDS | 25.0% |
| !! | AATTACTCTTGTTCAGTTTT+TGG | - | chr8.2:72174770-72174789 | MS.gene08486:intron | 25.0% |
| !! | ATGATTTTCATCTGTGATAT+TGG | + | chr8.2:72177212-72177231 | None:intergenic | 25.0% |
| !! | ATTTGGTTTAAGCTAATCTT+TGG | + | chr8.2:72175871-72175890 | None:intergenic | 25.0% |
| !!! | AATTTGTTTTCTGGTATGAA+AGG | - | chr8.2:72175391-72175410 | MS.gene08486:intron | 25.0% |
| !!! | TCTAATTTGGTTTTCATTAC+AGG | - | chr8.2:72177785-72177804 | MS.gene08486:CDS | 25.0% |
| !!! | TGTTATGCAAATTTGTTTTC+TGG | - | chr8.2:72175382-72175401 | MS.gene08486:intron | 25.0% |
| !!! | TTCTGAAATGCTTTATTTGA+AGG | - | chr8.2:72177417-72177436 | MS.gene08486:intron | 25.0% |
| AATAAGCTGCAAATAGCTTA+TGG | - | chr8.2:72176099-72176118 | MS.gene08486:intron | 30.0% | |
| AATACTTAAGCAACTATGCA+TGG | - | chr8.2:72176933-72176952 | MS.gene08486:intron | 30.0% | |
| AATGAAGTTCATGAATTGCA+AGG | - | chr8.2:72177517-72177536 | MS.gene08486:intron | 30.0% | |
| ACGAACAATCACTATATGAT+TGG | - | chr8.2:72177566-72177585 | MS.gene08486:CDS | 30.0% | |
| AGCATTACATGATATCTTAC+CGG | + | chr8.2:72176776-72176795 | None:intergenic | 30.0% | |
| AGTCCAATCATATATCATAG+CGG | - | chr8.2:72176981-72177000 | MS.gene08486:intron | 30.0% | |
| ATACTACTGCTTTCATTCAT+AGG | - | chr8.2:72174699-72174718 | MS.gene08486:intron | 30.0% | |
| ATGAAGTTCATGAATTGCAA+GGG | - | chr8.2:72177518-72177537 | MS.gene08486:intron | 30.0% | |
| CAAATTAGACCATTAATCCA+GGG | + | chr8.2:72177774-72177793 | None:intergenic | 30.0% | |
| CAAGTTCAAAATCACAAATG+TGG | - | chr8.2:72177487-72177506 | MS.gene08486:intron | 30.0% | |
| CAATTGAATCAAACATTCCT+TGG | - | chr8.2:72175479-72175498 | MS.gene08486:intron | 30.0% | |
| CATTCATCTTGTTCCATTTA+TGG | + | chr8.2:72177369-72177388 | None:intergenic | 30.0% | |
| CCCTAATTTAATTCAACATG+TGG | - | chr8.2:72176217-72176236 | MS.gene08486:intron | 30.0% | |
| CTTCTAAACAAAATACGACA+TGG | - | chr8.2:72177115-72177134 | MS.gene08486:intron | 30.0% | |
| GAAATGGATAGAATTGATGT+TGG | - | chr8.2:72175257-72175276 | MS.gene08486:intron | 30.0% | |
| GAATATAAAACTTCCATGGA+AGG | + | chr8.2:72177609-72177628 | None:intergenic | 30.0% | |
| GCCACATGTTGAATTAAATT+AGG | + | chr8.2:72176221-72176240 | None:intergenic | 30.0% | |
| GGAACTAAAGGAAATTTCAA+TGG | + | chr8.2:72175929-72175948 | None:intergenic | 30.0% | |
| GGTGTGATGAAATATATTGT+TGG | - | chr8.2:72175550-72175569 | MS.gene08486:CDS | 30.0% | |
| GTAAGATATCATGTAATGCT+TGG | - | chr8.2:72176776-72176795 | MS.gene08486:CDS | 30.0% | |
| TATCTATAGGAAATTCCTGT+TGG | - | chr8.2:72176900-72176919 | MS.gene08486:intron | 30.0% | |
| TATCTATGGTTATGATTCCT+CGG | - | chr8.2:72175420-72175439 | MS.gene08486:intron | 30.0% | |
| TATGGCTTATGTATATACAC+AGG | - | chr8.2:72174897-72174916 | MS.gene08486:intron | 30.0% | |
| TGAACAACAATCCAATAAAC+TGG | + | chr8.2:72175350-72175369 | None:intergenic | 30.0% | |
| TGCACATAATACACAAACAA+TGG | - | chr8.2:72177639-72177658 | MS.gene08486:CDS | 30.0% | |
| TTATTACACTGTGTTGAGTA+TGG | - | chr8.2:72174879-72174898 | MS.gene08486:intron | 30.0% | |
| TTTGATTCATCAAACATGAC+AGG | - | chr8.2:72176397-72176416 | MS.gene08486:intron | 30.0% | |
| ! | GAAATTTCCTTTAGTTCCTT+AGG | - | chr8.2:72175931-72175950 | MS.gene08486:CDS | 30.0% |
| ! | GATATACAACTTTGTTATGC+TGG | - | chr8.2:72176565-72176584 | MS.gene08486:CDS | 30.0% |
| ! | GGATCTGAATTTCATGATTT+TGG | - | chr8.2:72174481-72174500 | MS.gene08486:CDS | 30.0% |
| ! | TCTGAATTTCATGATTTTGG+TGG | - | chr8.2:72174484-72174503 | MS.gene08486:CDS | 30.0% |
| ! | TTTTAATCTTATGTTGTCCC+TGG | - | chr8.2:72177754-72177773 | MS.gene08486:CDS | 30.0% |
| !! | GTATTTTGTTTATGTCCAAC+AGG | + | chr8.2:72176918-72176937 | None:intergenic | 30.0% |
| !! | TACACATCATTGATGGTTTT+GGG | - | chr8.2:72175611-72175630 | MS.gene08486:CDS | 30.0% |
| !! | TTTCATGATTTTGGTGGTTA+TGG | - | chr8.2:72174490-72174509 | MS.gene08486:CDS | 30.0% |
| AAAACTTGTATATTCCGGCA+AGG | + | chr8.2:72176380-72176399 | None:intergenic | 35.0% | |
| AAACATGACAGGTGTGAAAA+TGG | - | chr8.2:72176408-72176427 | MS.gene08486:intron | 35.0% | |
| AAACTTGTATATTCCGGCAA+GGG | + | chr8.2:72176379-72176398 | None:intergenic | 35.0% | |
| AACAATAACTTGGAGATTGG+TGG | - | chr8.2:72175634-72175653 | MS.gene08486:CDS | 35.0% | |
| AAGCTGAGGTTTGATCAAAA+TGG | - | chr8.2:72174572-72174591 | MS.gene08486:intron | 35.0% | |
| ACACCGCTATGATATATGAT+TGG | + | chr8.2:72176987-72177006 | None:intergenic | 35.0% | |
| ACGACATGGAAATAACAGTT+AGG | - | chr8.2:72177129-72177148 | MS.gene08486:intron | 35.0% | |
| AGAGGCAAAAAACAAATTGG+TGG | - | chr8.2:72177812-72177831 | MS.gene08486:CDS | 35.0% | |
| AGCAGAGGCAAAAAACAAAT+TGG | - | chr8.2:72177809-72177828 | MS.gene08486:CDS | 35.0% | |
| ATGTTGGCACTATATTGTTG+TGG | - | chr8.2:72175273-72175292 | MS.gene08486:intron | 35.0% | |
| CACAATCTGTTTACGCAATT+CGG | + | chr8.2:72175064-72175083 | None:intergenic | 35.0% | |
| CCAAATTAGACCATTAATCC+AGG | + | chr8.2:72177775-72177794 | None:intergenic | 35.0% | |
| CCAGTGAAGACAATAAGATT+AGG | + | chr8.2:72174743-72174762 | None:intergenic | 35.0% | |
| CCTAATCTTATTGTCTTCAC+TGG | - | chr8.2:72174740-72174759 | MS.gene08486:intron | 35.0% | |
| CCTGGATTAATGGTCTAATT+TGG | - | chr8.2:72177772-72177791 | MS.gene08486:CDS | 35.0% | |
| CGACATGGAAATAACAGTTA+GGG | - | chr8.2:72177130-72177149 | MS.gene08486:intron | 35.0% | |
| GAATGAAAGCAGTAGTATTG+AGG | + | chr8.2:72174697-72174716 | None:intergenic | 35.0% | |
| GACAAGAGAATGAGTAGATA+CGG | - | chr8.2:72177248-72177267 | MS.gene08486:intron | 35.0% | |
| GACATGGAAATAACAGTTAG+GGG | - | chr8.2:72177131-72177150 | MS.gene08486:intron | 35.0% | |
| GCATTACATGATATCTTACC+GGG | + | chr8.2:72176775-72176794 | None:intergenic | 35.0% | |
| GGAATGTTTGATTCAATTGC+AGG | + | chr8.2:72175478-72175497 | None:intergenic | 35.0% | |
| GTTGCATAGGTAGACATAAT+TGG | - | chr8.2:72175038-72175057 | MS.gene08486:intron | 35.0% | |
| GTTTATTCAAACAGACCCTA+AGG | + | chr8.2:72175950-72175969 | None:intergenic | 35.0% | |
| TCAAATCATATCTCACAGTG+TGG | + | chr8.2:72177052-72177071 | None:intergenic | 35.0% | |
| TGAATTCAAGATATTGCAGG+TGG | - | chr8.2:72174595-72174614 | MS.gene08486:intron | 35.0% | |
| TGGTGAATTCAAGATATTGC+AGG | - | chr8.2:72174592-72174611 | MS.gene08486:intron | 35.0% | |
| TTATGTATATACACAGGCGA+GGG | - | chr8.2:72174903-72174922 | MS.gene08486:intron | 35.0% | |
| TTATGTTGTCCCTGGATTAA+TGG | - | chr8.2:72177762-72177781 | MS.gene08486:CDS | 35.0% | |
| ! | ATACAACTTTGTTATGCTGG+AGG | - | chr8.2:72176568-72176587 | MS.gene08486:CDS | 35.0% |
| ! | CACAGTGTGGATATTTGTTA+TGG | + | chr8.2:72177039-72177058 | None:intergenic | 35.0% |
| ! | CTGCAGAAAGCATACATAAA+AGG | - | chr8.2:72176304-72176323 | MS.gene08486:intron | 35.0% |
| ! | TACAACTTTGTTATGCTGGA+GGG | - | chr8.2:72176569-72176588 | MS.gene08486:CDS | 35.0% |
| !! | GTACACATCATTGATGGTTT+TGG | - | chr8.2:72175610-72175629 | MS.gene08486:CDS | 35.0% |
| !! | TCTTTTGAGAAAACCTTCCA+TGG | - | chr8.2:72177593-72177612 | MS.gene08486:CDS | 35.0% |
| !!! | GTACAAGAAGCATTTTGAGA+AGG | + | chr8.2:72174671-72174690 | None:intergenic | 35.0% |
| !!! | TGGTTTTGGGAACAATAACT+TGG | - | chr8.2:72175624-72175643 | MS.gene08486:CDS | 35.0% |
| AACAAGAGAATCAGAAGCTG+AGG | - | chr8.2:72174558-72174577 | MS.gene08486:intron | 40.0% | |
| AACAGACCCTAAGGAACTAA+AGG | + | chr8.2:72175941-72175960 | None:intergenic | 40.0% | |
| AACTTGTATATTCCGGCAAG+GGG | + | chr8.2:72176378-72176397 | None:intergenic | 40.0% | |
| AAGACAGATAAAGGAAGCTG+GGG | - | chr8.2:72176661-72176680 | MS.gene08486:CDS | 40.0% | |
| AAGTACATCCAAACAGAGTG+TGG | + | chr8.2:72174648-72174667 | None:intergenic | 40.0% | |
| AATTCCTACTACATGTGCCT+TGG | - | chr8.2:72174529-72174548 | MS.gene08486:intron | 40.0% | |
| AGAAGACAGATAAAGGAAGC+TGG | - | chr8.2:72176659-72176678 | MS.gene08486:CDS | 40.0% | |
| AGCTTGGAGAAGACAGATAA+AGG | - | chr8.2:72176652-72176671 | MS.gene08486:CDS | 40.0% | |
| AGGGAAAGTTCTTTCAAGGT+AGG | - | chr8.2:72177537-72177556 | MS.gene08486:intron | 40.0% | |
| CAATCATAACCAGGAATCGA+CGG | + | chr8.2:72175736-72175755 | None:intergenic | 40.0% | |
| CAGCATCTTACTGGAATTGA+TGG | - | chr8.2:72176724-72176743 | MS.gene08486:CDS | 40.0% | |
| CCATCAATGATGTGTACTTC+TGG | + | chr8.2:72175607-72175626 | None:intergenic | 40.0% | |
| CTTATGTATATACACAGGCG+AGG | - | chr8.2:72174902-72174921 | MS.gene08486:intron | 40.0% | |
| GAAGACAGATAAAGGAAGCT+GGG | - | chr8.2:72176660-72176679 | MS.gene08486:CDS | 40.0% | |
| GAATGTAAGAAGAGATGCTC+TGG | - | chr8.2:72177384-72177403 | MS.gene08486:intron | 40.0% | |
| GACAGGTGTGAAAATGGAAA+CGG | - | chr8.2:72176414-72176433 | MS.gene08486:intron | 40.0% | |
| GCAGATATGCACTATGCAAA+TGG | - | chr8.2:72174617-72174636 | MS.gene08486:intron | 40.0% | |
| GGGAACAATAACTTGGAGAT+TGG | - | chr8.2:72175631-72175650 | MS.gene08486:CDS | 40.0% | |
| TAAGATTAGGCTTCTCAGCA+AGG | + | chr8.2:72174730-72174749 | None:intergenic | 40.0% | |
| TAGTTGTTCTGCAGTTGCAT+AGG | - | chr8.2:72175025-72175044 | MS.gene08486:intron | 40.0% | |
| TCAATGATGTGTACTTCTGG+AGG | + | chr8.2:72175604-72175623 | None:intergenic | 40.0% | |
| TGAATCAAACATTCCTTGGG+TGG | - | chr8.2:72175483-72175502 | MS.gene08486:intron | 40.0% | |
| TGCAAGGGAAAGTTCTTTCA+AGG | - | chr8.2:72177533-72177552 | MS.gene08486:intron | 40.0% | |
| TGGAAAAACCACACTCTGTT+TGG | - | chr8.2:72174637-72174656 | MS.gene08486:intron | 40.0% | |
| TGGTTATGATTCCTCGGATT+CGG | - | chr8.2:72175426-72175445 | MS.gene08486:intron | 40.0% | |
| ! | ATGTGAAAGTATGCAAGACC+AGG | + | chr8.2:72176355-72176374 | None:intergenic | 40.0% |
| ! | CCAGAAGTACACATCATTGA+TGG | - | chr8.2:72175604-72175623 | MS.gene08486:CDS | 40.0% |
| ! | GTTTTCATTACAGGAAGCAG+AGG | - | chr8.2:72177794-72177813 | MS.gene08486:CDS | 40.0% |
| !! | GCTTTATTTGAAGGCTCAGA+TGG | - | chr8.2:72177426-72177445 | MS.gene08486:intron | 40.0% |
| !! | TCTTACTGGAATTGATGGTG+AGG | - | chr8.2:72176729-72176748 | MS.gene08486:CDS | 40.0% |
| !! | TGATGGCATTAGTTCTGCTT+CGG | - | chr8.2:72176444-72176463 | MS.gene08486:intron | 40.0% |
| !! | TTTTGGTGGTTATGGTGTCA+TGG | - | chr8.2:72174498-72174517 | MS.gene08486:intron | 40.0% |
| !!! | ATTCTCTTGTTTTGCAGCCA+AGG | + | chr8.2:72174549-72174568 | None:intergenic | 40.0% |
| !!! | TGGTTATGGTGTCATGGTTT+TGG | - | chr8.2:72174504-72174523 | MS.gene08486:intron | 40.0% |
| AGAAGTCATTGAGGTGATCG+TGG | + | chr8.2:72176531-72176550 | None:intergenic | 45.0% | |
| ATACTTTCACATCCCCTTGC+CGG | - | chr8.2:72176363-72176382 | MS.gene08486:intron | 45.0% | |
| ATCCAGCCTTTCCATAAGCA+TGG | + | chr8.2:72176603-72176622 | None:intergenic | 45.0% | |
| ATGCTTATGGAAAGGCTGGA+TGG | - | chr8.2:72176602-72176621 | MS.gene08486:CDS | 45.0% | |
| CAATTGCAGGAGCAAATGCA+AGG | + | chr8.2:72175465-72175484 | None:intergenic | 45.0% | |
| CAGTAAGATGCTGATCATCG+AGG | + | chr8.2:72176717-72176736 | None:intergenic | 45.0% | |
| CGGATACCATGCTTATGGAA+AGG | - | chr8.2:72176594-72176613 | MS.gene08486:CDS | 45.0% | |
| CTCGATGATCAGCATCTTAC+TGG | - | chr8.2:72176715-72176734 | MS.gene08486:CDS | 45.0% | |
| GATCACCTCAATGACTTCTG+CGG | - | chr8.2:72176532-72176551 | MS.gene08486:CDS | 45.0% | |
| GGCTTGATCCAATCATAACC+AGG | + | chr8.2:72175745-72175764 | None:intergenic | 45.0% | |
| GGTGTGAAAATGGAAACGGA+TGG | - | chr8.2:72176418-72176437 | MS.gene08486:intron | 45.0% | |
| GGTTTCTTCACAACCTTGGT+TGG | - | chr8.2:72176475-72176494 | MS.gene08486:intron | 45.0% | |
| GTGAAAATGGAAACGGATGG+CGG | - | chr8.2:72176421-72176440 | MS.gene08486:intron | 45.0% | |
| TACCATGCTTATGGAAAGGC+TGG | - | chr8.2:72176598-72176617 | MS.gene08486:CDS | 45.0% | |
| TAGGGAACCATGACCAAGAA+GGG | - | chr8.2:72175512-72175531 | MS.gene08486:intron | 45.0% | |
| TCGAACCAAAGTTGCTGTGA+GGG | + | chr8.2:72175766-72175785 | None:intergenic | 45.0% | |
| TTAGGGAACCATGACCAAGA+AGG | - | chr8.2:72175511-72175530 | MS.gene08486:intron | 45.0% | |
| ! | CTCTGGTTTCTTCACAACCT+TGG | - | chr8.2:72176471-72176490 | MS.gene08486:intron | 45.0% |
| ! | CTTTGTTATGCTGGAGGGTT+CGG | - | chr8.2:72176574-72176593 | MS.gene08486:CDS | 45.0% |
| ! | GGCTCAGATGGTGTTAAAAC+AGG | - | chr8.2:72177438-72177457 | MS.gene08486:intron | 45.0% |
| !! | ATTCCTTGGGTGGCTGTTTT+AGG | - | chr8.2:72175493-72175512 | MS.gene08486:intron | 45.0% |
| !! | CGTCGATTCCTGGTTATGAT+TGG | - | chr8.2:72175734-72175753 | MS.gene08486:CDS | 45.0% |
| !! | GAATTGATGGTGAGGTCCTA+TGG | - | chr8.2:72176737-72176756 | MS.gene08486:CDS | 45.0% |
| !! | TTCCTTGGGTGGCTGTTTTA+GGG | - | chr8.2:72175494-72175513 | MS.gene08486:intron | 45.0% |
| !! | TTGGAGATTGGTGGTGTTCA+AGG | - | chr8.2:72175643-72175662 | MS.gene08486:CDS | 45.0% |
| !! | AAAAAATTATAATTATCTAT+AGG | - | chr8.2:72176887-72176906 | MS.gene08486:CDS | 5.0% |
| !!! | AATTTTTTTTTTTTTTTTGA+GGG | + | chr8.2:72176875-72176894 | None:intergenic | 5.0% |
| !!! | TAATTTTTTTTTTTTTTTTG+AGG | + | chr8.2:72176876-72176895 | None:intergenic | 5.0% |
| !!! | TTAATTTTAATATAAAACAA+TGG | + | chr8.2:72176259-72176278 | None:intergenic | 5.0% |
| AAGAGTGGTGGTAGCTAGCT+TGG | - | chr8.2:72176636-72176655 | MS.gene08486:CDS | 50.0% | |
| ACCAAGAAGGGTCACTCTCT+AGG | - | chr8.2:72175524-72175543 | MS.gene08486:intron | 50.0% | |
| ACCAGGAATCGACGGAACTT+TGG | + | chr8.2:72175728-72175747 | None:intergenic | 50.0% | |
| AGAGTGACCCTTCTTGGTCA+TGG | + | chr8.2:72175522-72175541 | None:intergenic | 50.0% | |
| AGTTCTGCTTCGGTGAACTC+TGG | - | chr8.2:72176454-72176473 | MS.gene08486:intron | 50.0% | |
| ATGGAAAGGCTGGATGGTCT+CGG | - | chr8.2:72176608-72176627 | MS.gene08486:CDS | 50.0% | |
| CCAAGAAGGGTCACTCTCTA+GGG | - | chr8.2:72175525-72175544 | MS.gene08486:intron | 50.0% | |
| CTCGAACCAAAGTTGCTGTG+AGG | + | chr8.2:72175767-72175786 | None:intergenic | 50.0% | |
| CTCGGATTCGGCTAAATCGA+TGG | - | chr8.2:72175438-72175457 | MS.gene08486:intron | 50.0% | |
| GGGTTCGGATACCATGCTTA+TGG | - | chr8.2:72176589-72176608 | MS.gene08486:CDS | 50.0% | |
| GTGATCGTGGCCAACGAAAA+CGG | + | chr8.2:72176518-72176537 | None:intergenic | 50.0% | |
| TCAAGCCCTCACAGCAACTT+TGG | - | chr8.2:72175758-72175777 | MS.gene08486:CDS | 50.0% | |
| TGACTTCTGCGGCAAGCTAA+TGG | - | chr8.2:72176543-72176562 | MS.gene08486:CDS | 50.0% | |
| TGCTCAACTCGACGCTTTCA+AGG | - | chr8.2:72177279-72177298 | MS.gene08486:intron | 50.0% | |
| TTCACAACCTTGGTTGGAGC+AGG | - | chr8.2:72176481-72176500 | MS.gene08486:intron | 50.0% | |
| TTCCCTAAAACAGCCACCCA+AGG | + | chr8.2:72175499-72175518 | None:intergenic | 50.0% | |
| !! | CATCGATTTAGCCGAATCCG+AGG | + | chr8.2:72175440-72175459 | None:intergenic | 50.0% |
| !! | TCCAAAGTTCCGTCGATTCC+TGG | - | chr8.2:72175724-72175743 | MS.gene08486:CDS | 50.0% |
| AAAGGCTGGATGGTCTCGGA+GGG | - | chr8.2:72176612-72176631 | MS.gene08486:CDS | 55.0% | |
| AGCGAACGTCTGCGAAGCTT+CGG | - | chr8.2:72175785-72175804 | MS.gene08486:CDS | 55.0% | |
| CCAGGAGCAGCTTCTTTCTG+AGG | + | chr8.2:72176337-72176356 | None:intergenic | 55.0% | |
| CCCTAGAGAGTGACCCTTCT+TGG | + | chr8.2:72175528-72175547 | None:intergenic | 55.0% | |
| CCTCAGAAAGAAGCTGCTCC+TGG | - | chr8.2:72176334-72176353 | MS.gene08486:intron | 55.0% | |
| GCAGCCAAGGCACATGTAGT+AGG | + | chr8.2:72174536-72174555 | None:intergenic | 55.0% | |
| GCTTGCCGCAGAAGTCATTG+AGG | + | chr8.2:72176540-72176559 | None:intergenic | 55.0% | |
| ! | ATGGAAACGGATGGCGGTGA+TGG | - | chr8.2:72176427-72176446 | MS.gene08486:intron | 55.0% |
| ! | GAAGGGTCACTCTCTAGGGA+AGG | - | chr8.2:72175529-72175548 | MS.gene08486:intron | 55.0% |
| !! | CTATGGAGCAAGAGCACTCC+CGG | - | chr8.2:72176754-72176773 | MS.gene08486:CDS | 55.0% |
| !! | GACGTGAAGGCCGTTTTCGT+TGG | - | chr8.2:72176505-72176524 | MS.gene08486:intron | 55.0% |
| !! | GCAGCTTCTTTCTGAGGTGC+TGG | + | chr8.2:72176331-72176350 | None:intergenic | 55.0% |
| AGGCGAGGGAGTTGAGCTAG+CGG | - | chr8.2:72174917-72174936 | MS.gene08486:intron | 60.0% | |
| ATGGTCTCGGAGGGCAAGAG+TGG | - | chr8.2:72176621-72176640 | MS.gene08486:CDS | 60.0% | |
| CACGTCTCCTGCTCCAACCA+AGG | + | chr8.2:72176491-72176510 | None:intergenic | 60.0% | |
| GAAAGGCTGGATGGTCTCGG+AGG | - | chr8.2:72176611-72176630 | MS.gene08486:CDS | 60.0% | |
| GCGAACGTCTGCGAAGCTTC+GGG | - | chr8.2:72175786-72175805 | MS.gene08486:CDS | 60.0% | |
| GGTTGGAGCAGGAGACGTGA+AGG | - | chr8.2:72176492-72176511 | MS.gene08486:intron | 60.0% | |
| !! | CGGGAGTGCTCTTGCTCCAT+AGG | + | chr8.2:72176756-72176775 | None:intergenic | 60.0% |
| GTCTCGGAGGGCAAGAGTGG+TGG | - | chr8.2:72176624-72176643 | MS.gene08486:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 72174479 | 72177841 | 72174479 | ID=MS.gene08486 |
| chr8.2 | mRNA | 72174479 | 72177841 | 72174479 | ID=MS.gene08486.t1;Parent=MS.gene08486 |
| chr8.2 | exon | 72177559 | 72177841 | 72177559 | ID=MS.gene08486.t1.exon1;Parent=MS.gene08486.t1 |
| chr8.2 | CDS | 72177559 | 72177841 | 72177559 | ID=cds.MS.gene08486.t1;Parent=MS.gene08486.t1 |
| chr8.2 | exon | 72176513 | 72176907 | 72176513 | ID=MS.gene08486.t1.exon2;Parent=MS.gene08486.t1 |
| chr8.2 | CDS | 72176513 | 72176907 | 72176513 | ID=cds.MS.gene08486.t1;Parent=MS.gene08486.t1 |
| chr8.2 | exon | 72175545 | 72176010 | 72175545 | ID=MS.gene08486.t1.exon3;Parent=MS.gene08486.t1 |
| chr8.2 | CDS | 72175545 | 72176010 | 72175545 | ID=cds.MS.gene08486.t1;Parent=MS.gene08486.t1 |
| chr8.2 | exon | 72174479 | 72174513 | 72174479 | ID=MS.gene08486.t1.exon4;Parent=MS.gene08486.t1 |
| chr8.2 | CDS | 72174479 | 72174513 | 72174479 | ID=cds.MS.gene08486.t1;Parent=MS.gene08486.t1 |
| Gene Sequence |
| Protein sequence |
