Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08586.t1 | XP_024636087.1 | 94.9 | 534 | 23 | 1 | 1 | 534 | 1 | 530 | 4.00E-297 | 1030 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08586.t1 | Q6T486 | 27.4 | 270 | 169 | 9 | 260 | 517 | 89 | 343 | 8.0e-20 | 100.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08586.t1 | A0A396I5F0 | 94.9 | 534 | 23 | 1 | 1 | 534 | 1 | 530 | 2.9e-297 | 1030.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene08586 | 0.845374 | 4.23E-59 | -1.69E-46 |
MS.gene049342 | MS.gene08586 | 0.809669 | 1.69E-50 | -1.69E-46 |
MS.gene049343 | MS.gene08586 | 0.811845 | 5.71E-51 | -1.69E-46 |
MS.gene049404 | MS.gene08586 | 0.807609 | 4.65E-50 | -1.69E-46 |
MS.gene049473 | MS.gene08586 | 0.805934 | 1.05E-49 | -1.69E-46 |
MS.gene049711 | MS.gene08586 | 0.80963 | 1.72E-50 | -1.69E-46 |
MS.gene049821 | MS.gene08586 | 0.8061 | 9.69E-50 | -1.69E-46 |
MS.gene049824 | MS.gene08586 | 0.816247 | 6.10E-52 | -1.69E-46 |
MS.gene049825 | MS.gene08586 | 0.82279 | 1.96E-53 | -1.69E-46 |
MS.gene049863 | MS.gene08586 | 0.811576 | 6.53E-51 | -1.69E-46 |
MS.gene049873 | MS.gene08586 | 0.846777 | 1.76E-59 | -1.69E-46 |
MS.gene050026 | MS.gene08586 | 0.818393 | 2.01E-52 | -1.69E-46 |
MS.gene050559 | MS.gene08586 | 0.835094 | 2.05E-56 | -1.69E-46 |
MS.gene050561 | MS.gene08586 | 0.822647 | 2.12E-53 | -1.69E-46 |
MS.gene050562 | MS.gene08586 | 0.814067 | 1.86E-51 | -1.69E-46 |
MS.gene051279 | MS.gene08586 | 0.837783 | 4.24E-57 | -1.69E-46 |
MS.gene051594 | MS.gene08586 | 0.80733 | 5.33E-50 | -1.69E-46 |
MS.gene051719 | MS.gene08586 | 0.809343 | 1.98E-50 | -1.69E-46 |
MS.gene051720 | MS.gene08586 | 0.809793 | 1.59E-50 | -1.69E-46 |
MS.gene051744 | MS.gene08586 | 0.863955 | 1.72E-64 | -1.69E-46 |
MS.gene051957 | MS.gene08586 | 0.806598 | 7.61E-50 | -1.69E-46 |
MS.gene052519 | MS.gene08586 | 0.831708 | 1.43E-55 | -1.69E-46 |
MS.gene052582 | MS.gene08586 | 0.838323 | 3.08E-57 | -1.69E-46 |
MS.gene052584 | MS.gene08586 | 0.851834 | 6.86E-61 | -1.69E-46 |
MS.gene052717 | MS.gene08586 | 0.802165 | 6.38E-49 | -1.69E-46 |
MS.gene052773 | MS.gene08586 | 0.80655 | 7.79E-50 | -1.69E-46 |
MS.gene053122 | MS.gene08586 | 0.811289 | 7.54E-51 | -1.69E-46 |
MS.gene053226 | MS.gene08586 | 0.857646 | 1.42E-62 | -1.69E-46 |
MS.gene053599 | MS.gene08586 | 0.800656 | 1.30E-48 | -1.69E-46 |
MS.gene05364 | MS.gene08586 | 0.811611 | 6.42E-51 | -1.69E-46 |
MS.gene053995 | MS.gene08586 | 0.857864 | 1.22E-62 | -1.69E-46 |
MS.gene05415 | MS.gene08586 | 0.803319 | 3.69E-49 | -1.69E-46 |
MS.gene054576 | MS.gene08586 | 0.802335 | 5.89E-49 | -1.69E-46 |
MS.gene054651 | MS.gene08586 | 0.870613 | 1.28E-66 | -1.69E-46 |
MS.gene055166 | MS.gene08586 | 0.805236 | 1.47E-49 | -1.69E-46 |
MS.gene055374 | MS.gene08586 | 0.808831 | 2.55E-50 | -1.69E-46 |
MS.gene055513 | MS.gene08586 | 0.812664 | 3.78E-51 | -1.69E-46 |
MS.gene055586 | MS.gene08586 | 0.841316 | 5.12E-58 | -1.69E-46 |
MS.gene055589 | MS.gene08586 | 0.821314 | 4.31E-53 | -1.69E-46 |
MS.gene055694 | MS.gene08586 | 0.800386 | 1.48E-48 | -1.69E-46 |
MS.gene055778 | MS.gene08586 | 0.832848 | 7.48E-56 | -1.69E-46 |
MS.gene055808 | MS.gene08586 | 0.815434 | 9.26E-52 | -1.69E-46 |
MS.gene056050 | MS.gene08586 | 0.812934 | 3.30E-51 | -1.69E-46 |
MS.gene056091 | MS.gene08586 | 0.80757 | 4.74E-50 | -1.69E-46 |
MS.gene056366 | MS.gene08586 | 0.82588 | 3.68E-54 | -1.69E-46 |
MS.gene056776 | MS.gene08586 | 0.801474 | 8.85E-49 | -1.69E-46 |
MS.gene05686 | MS.gene08586 | 0.822301 | 2.55E-53 | -1.69E-46 |
MS.gene057102 | MS.gene08586 | 0.821793 | 3.34E-53 | -1.69E-46 |
MS.gene057208 | MS.gene08586 | 0.813142 | 2.97E-51 | -1.69E-46 |
MS.gene058037 | MS.gene08586 | 0.834219 | 3.40E-56 | -1.69E-46 |
MS.gene058625 | MS.gene08586 | 0.832237 | 1.06E-55 | -1.69E-46 |
MS.gene058783 | MS.gene08586 | 0.809668 | 1.69E-50 | -1.69E-46 |
MS.gene058979 | MS.gene08586 | 0.804416 | 2.18E-49 | -1.69E-46 |
MS.gene059084 | MS.gene08586 | 0.802461 | 5.55E-49 | -1.69E-46 |
MS.gene05950 | MS.gene08586 | 0.812038 | 5.18E-51 | -1.69E-46 |
MS.gene05953 | MS.gene08586 | 0.8148 | 1.28E-51 | -1.69E-46 |
MS.gene05954 | MS.gene08586 | 0.833867 | 4.17E-56 | -1.69E-46 |
MS.gene059625 | MS.gene08586 | 0.81508 | 1.11E-51 | -1.69E-46 |
MS.gene05985 | MS.gene08586 | -0.824724 | 6.91E-54 | -1.69E-46 |
MS.gene059935 | MS.gene08586 | 0.844064 | 9.53E-59 | -1.69E-46 |
MS.gene060365 | MS.gene08586 | 0.826995 | 2.00E-54 | -1.69E-46 |
MS.gene060429 | MS.gene08586 | 0.813247 | 2.82E-51 | -1.69E-46 |
MS.gene060521 | MS.gene08586 | 0.81497 | 1.17E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08586.t1 | MTR_2g028870 | 32.808 | 381 | 232 | 11 | 157 | 528 | 66 | 431 | 1.82e-56 | 198 |
MS.gene08586.t1 | MTR_1g105460 | 36.458 | 192 | 112 | 4 | 329 | 518 | 121 | 304 | 3.17e-36 | 137 |
MS.gene08586.t1 | MTR_3g462590 | 33.491 | 212 | 128 | 4 | 303 | 511 | 89 | 290 | 9.03e-35 | 133 |
MS.gene08586.t1 | MTR_2g044420 | 34.286 | 210 | 126 | 4 | 294 | 501 | 70 | 269 | 1.79e-32 | 126 |
MS.gene08586.t1 | MTR_3g462570 | 35.849 | 212 | 123 | 5 | 311 | 519 | 46 | 247 | 2.98e-32 | 131 |
MS.gene08586.t1 | MTR_3g462570 | 36.154 | 130 | 71 | 3 | 386 | 513 | 420 | 539 | 4.52e-17 | 84.7 |
MS.gene08586.t1 | MTR_5g062990 | 34.722 | 216 | 130 | 5 | 296 | 510 | 94 | 299 | 1.38e-31 | 124 |
MS.gene08586.t1 | MTR_5g078410 | 33.755 | 237 | 121 | 9 | 277 | 512 | 130 | 331 | 1.90e-29 | 119 |
MS.gene08586.t1 | MTR_2g044240 | 33.333 | 204 | 115 | 5 | 311 | 508 | 68 | 256 | 3.58e-29 | 116 |
MS.gene08586.t1 | MTR_2g044290 | 33.171 | 205 | 125 | 3 | 299 | 501 | 68 | 262 | 4.86e-29 | 116 |
MS.gene08586.t1 | MTR_2g044440 | 33.158 | 190 | 115 | 4 | 311 | 498 | 96 | 275 | 1.18e-28 | 115 |
MS.gene08586.t1 | MTR_0777s0010 | 31.884 | 207 | 128 | 5 | 310 | 512 | 246 | 443 | 6.44e-28 | 117 |
MS.gene08586.t1 | MTR_3g463280 | 31.222 | 221 | 133 | 5 | 301 | 510 | 15 | 227 | 1.37e-27 | 112 |
MS.gene08586.t1 | MTR_3g462530 | 38.125 | 160 | 88 | 3 | 354 | 511 | 46 | 196 | 1.41e-27 | 113 |
MS.gene08586.t1 | MTR_3g463310 | 31.507 | 219 | 134 | 5 | 301 | 510 | 16 | 227 | 3.56e-27 | 110 |
MS.gene08586.t1 | MTR_8g022900 | 28.700 | 223 | 134 | 6 | 309 | 519 | 61 | 270 | 5.85e-27 | 110 |
MS.gene08586.t1 | MTR_4g063815 | 28.326 | 233 | 149 | 5 | 284 | 512 | 30 | 248 | 1.25e-26 | 109 |
MS.gene08586.t1 | MTR_1g105450 | 37.584 | 149 | 84 | 3 | 371 | 518 | 3 | 143 | 5.61e-26 | 103 |
MS.gene08586.t1 | MTR_2g044250 | 31.579 | 190 | 118 | 4 | 311 | 498 | 69 | 248 | 4.15e-25 | 105 |
MS.gene08586.t1 | MTR_3g462560 | 32.804 | 189 | 111 | 5 | 311 | 496 | 53 | 228 | 4.76e-25 | 104 |
MS.gene08586.t1 | MTR_3g462500 | 27.363 | 201 | 135 | 4 | 299 | 496 | 50 | 242 | 7.07e-21 | 93.2 |
MS.gene08586.t1 | MTR_2g044260 | 29.018 | 224 | 136 | 5 | 293 | 503 | 63 | 276 | 2.34e-20 | 92.0 |
MS.gene08586.t1 | MTR_3g462430 | 34.591 | 159 | 89 | 5 | 357 | 512 | 96 | 242 | 7.25e-20 | 89.7 |
MS.gene08586.t1 | MTR_3g014030 | 27.586 | 203 | 128 | 7 | 310 | 507 | 1521 | 1709 | 5.18e-19 | 92.0 |
MS.gene08586.t1 | MTR_4g063810 | 27.807 | 187 | 123 | 4 | 311 | 495 | 91 | 267 | 1.24e-18 | 87.4 |
MS.gene08586.t1 | MTR_1g037750 | 27.586 | 203 | 128 | 7 | 310 | 507 | 224 | 412 | 1.32e-18 | 89.0 |
MS.gene08586.t1 | MTR_1g105465 | 25.000 | 244 | 162 | 5 | 255 | 496 | 90 | 314 | 4.48e-17 | 83.2 |
MS.gene08586.t1 | MTR_3g086770 | 26.108 | 203 | 131 | 7 | 310 | 507 | 1509 | 1697 | 3.73e-16 | 82.8 |
MS.gene08586.t1 | MTR_2g038640 | 28.829 | 222 | 104 | 10 | 277 | 496 | 130 | 299 | 2.41e-15 | 77.8 |
MS.gene08586.t1 | MTR_3g055400 | 23.148 | 216 | 105 | 3 | 307 | 518 | 42 | 200 | 6.58e-13 | 68.2 |
MS.gene08586.t1 | MTR_2g098580 | 24.762 | 210 | 138 | 7 | 310 | 513 | 146 | 341 | 3.50e-11 | 66.2 |
MS.gene08586.t1 | MTR_3g065410 | 24.762 | 210 | 138 | 7 | 310 | 513 | 129 | 324 | 6.73e-11 | 65.5 |
MS.gene08586.t1 | MTR_3g462490 | 26.797 | 153 | 87 | 3 | 302 | 454 | 279 | 406 | 7.24e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08586.t1 | AT5G60250 | 41.155 | 537 | 273 | 9 | 27 | 532 | 1 | 525 | 1.29e-140 | 421 |
MS.gene08586.t1 | AT2G25370 | 45.669 | 381 | 191 | 6 | 138 | 514 | 135 | 503 | 1.97e-103 | 324 |
MS.gene08586.t1 | AT3G45580 | 41.322 | 363 | 198 | 4 | 158 | 519 | 29 | 377 | 3.45e-98 | 304 |
MS.gene08586.t1 | AT2G25370 | 44.619 | 381 | 168 | 7 | 138 | 514 | 105 | 446 | 8.01e-95 | 300 |
MS.gene08586.t1 | AT2G25360 | 44.186 | 344 | 173 | 5 | 212 | 552 | 1 | 328 | 1.32e-89 | 281 |
MS.gene08586.t1 | AT5G37560 | 39.048 | 420 | 217 | 7 | 142 | 548 | 21 | 414 | 1.99e-86 | 275 |
MS.gene08586.t1 | AT2G21420 | 40.052 | 382 | 196 | 8 | 140 | 514 | 28 | 383 | 6.49e-84 | 269 |
MS.gene08586.t1 | AT2G26130 | 38.122 | 362 | 203 | 5 | 155 | 513 | 12 | 355 | 1.38e-78 | 253 |
MS.gene08586.t1 | AT3G43750 | 39.943 | 348 | 188 | 6 | 154 | 498 | 10 | 339 | 7.50e-78 | 249 |
MS.gene08586.t1 | AT3G45470 | 50.463 | 216 | 98 | 2 | 308 | 521 | 3 | 211 | 1.92e-69 | 223 |
MS.gene08586.t1 | AT3G45540 | 43.321 | 277 | 147 | 4 | 238 | 510 | 25 | 295 | 2.83e-69 | 227 |
MS.gene08586.t1 | AT3G45540 | 43.911 | 271 | 142 | 4 | 244 | 510 | 2 | 266 | 6.52e-69 | 225 |
MS.gene08586.t1 | AT3G45480 | 35.955 | 356 | 192 | 6 | 159 | 512 | 21 | 342 | 1.70e-68 | 226 |
MS.gene08586.t1 | AT2G26135 | 36.544 | 353 | 187 | 6 | 159 | 510 | 29 | 345 | 7.15e-68 | 224 |
MS.gene08586.t1 | AT3G45460 | 33.684 | 380 | 220 | 6 | 134 | 512 | 6 | 354 | 2.85e-67 | 223 |
MS.gene08586.t1 | AT2G19610 | 35.475 | 358 | 219 | 8 | 158 | 509 | 51 | 402 | 1.50e-66 | 222 |
MS.gene08586.t1 | AT3G45570 | 38.387 | 310 | 170 | 7 | 159 | 463 | 18 | 311 | 8.08e-65 | 214 |
MS.gene08586.t1 | AT2G19610 | 34.393 | 346 | 216 | 7 | 158 | 498 | 51 | 390 | 1.87e-61 | 208 |
MS.gene08586.t1 | AT5G07640 | 37.785 | 307 | 183 | 6 | 159 | 462 | 9 | 310 | 1.82e-58 | 197 |
MS.gene08586.t1 | AT3G45555 | 48.958 | 192 | 87 | 4 | 309 | 497 | 15 | 198 | 7.37e-51 | 174 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT4G19670 | 32.454 | 379 | 235 | 11 | 157 | 526 | 59 | 425 | 1.27e-48 | 177 |
MS.gene08586.t1 | AT3G45510 | 38.725 | 204 | 115 | 3 | 252 | 454 | 10 | 204 | 1.04e-40 | 148 |
MS.gene08586.t1 | AT3G45560 | 32.000 | 275 | 166 | 6 | 158 | 427 | 13 | 271 | 1.49e-36 | 142 |
MS.gene08586.t1 | AT3G53690 | 32.432 | 222 | 139 | 3 | 299 | 518 | 103 | 315 | 7.00e-35 | 134 |
MS.gene08586.t1 | AT3G14250 | 29.911 | 224 | 143 | 4 | 299 | 516 | 83 | 298 | 6.77e-31 | 122 |
MS.gene08586.t1 | AT3G45490 | 38.728 | 173 | 86 | 6 | 130 | 295 | 2 | 161 | 3.68e-21 | 92.4 |
MS.gene08586.t1 | AT4G01020 | 27.723 | 202 | 126 | 6 | 311 | 507 | 1561 | 1747 | 9.64e-18 | 87.8 |
MS.gene08586.t1 | AT5G10370 | 27.228 | 202 | 127 | 6 | 311 | 507 | 1564 | 1750 | 1.96e-17 | 87.0 |
MS.gene08586.t1 | AT1G05890 | 25.481 | 208 | 135 | 7 | 310 | 511 | 131 | 324 | 6.40e-13 | 71.6 |
MS.gene08586.t1 | AT2G31770 | 27.477 | 222 | 140 | 7 | 305 | 519 | 122 | 329 | 6.75e-13 | 71.6 |
MS.gene08586.t1 | AT1G05890 | 25.238 | 210 | 137 | 7 | 310 | 513 | 173 | 368 | 7.04e-13 | 71.6 |
MS.gene08586.t1 | AT3G43180 | 38.835 | 103 | 54 | 3 | 274 | 375 | 30 | 124 | 9.64e-13 | 67.4 |
MS.gene08586.t1 | AT2G31510 | 24.151 | 265 | 169 | 10 | 259 | 513 | 89 | 331 | 3.85e-12 | 69.3 |
MS.gene08586.t1 | AT2G31510 | 24.151 | 265 | 169 | 10 | 259 | 513 | 89 | 331 | 3.98e-12 | 69.3 |
MS.gene08586.t1 | AT2G31510 | 24.151 | 265 | 169 | 10 | 259 | 513 | 17 | 259 | 1.24e-11 | 67.4 |
MS.gene08586.t1 | AT3G27710 | 26.887 | 212 | 138 | 6 | 311 | 517 | 121 | 320 | 2.39e-11 | 66.6 |
MS.gene08586.t1 | AT1G65430 | 24.820 | 278 | 165 | 12 | 252 | 511 | 69 | 320 | 5.22e-11 | 65.9 |
MS.gene08586.t1 | AT2G31760 | 26.496 | 234 | 140 | 8 | 311 | 537 | 121 | 329 | 5.45e-11 | 65.5 |
Find 136 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAAGCGTGTTATTTATTT+TGG | 0.158679 | 4.1:+38378810 | MS.gene08586:CDS |
AACCATGCAGCAACGAAATT+TGG | 0.194789 | 4.1:+38380923 | MS.gene08586:CDS |
AGACTACTCCAAAAGTCTTA+TGG | 0.234580 | 4.1:+38381025 | MS.gene08586:CDS |
TTTGATATTGGAAATTTCTA+AGG | 0.256945 | 4.1:+38378704 | MS.gene08586:CDS |
TACAGAGCCCATAAGACTTT+TGG | 0.264270 | 4.1:-38381033 | None:intergenic |
CTCTGGCATCAAGGAGTCTT+TGG | 0.274888 | 4.1:+38381195 | MS.gene08586:CDS |
TTTGGGAAGAGGACAATATT+TGG | 0.281754 | 4.1:+38382690 | MS.gene08586:CDS |
TTGGTCAGTTAAGTGGAAAA+TGG | 0.293607 | 4.1:+38380505 | MS.gene08586:intron |
AACTTCTAGTTGACAGTTGC+CGG | 0.294527 | 4.1:+38380874 | MS.gene08586:CDS |
AGTCAAAGTCTTGTTGTTCT+TGG | 0.295431 | 4.1:-38378146 | None:intergenic |
GAAAATTGCTGTGGAGCTTA+TGG | 0.307792 | 4.1:+38378749 | MS.gene08586:CDS |
ACGATGAAGGTCCAGTTGTT+AGG | 0.314851 | 4.1:+38378586 | MS.gene08586:CDS |
GGCGGTGGAGGAGGAGGAGG+AGG | 0.315599 | 4.1:-38378292 | None:intergenic |
GACTACTCCAAAAGTCTTAT+GGG | 0.321935 | 4.1:+38381026 | MS.gene08586:CDS |
AAAGACGGCGGTGGAGGAGG+AGG | 0.332308 | 4.1:-38378298 | None:intergenic |
TTTCAATGCTGTTATTGCTT+TGG | 0.334453 | 4.1:+38378785 | MS.gene08586:CDS |
GGTGAGAGTGTTTCTTTGGC+TGG | 0.336538 | 4.1:+38378648 | MS.gene08586:CDS |
CAACATGCCGGTGGAGGATT+GGG | 0.338560 | 4.1:+38378497 | MS.gene08586:CDS |
GAGAGGTGAGAGTGTTTCTT+TGG | 0.346695 | 4.1:+38378644 | MS.gene08586:CDS |
TCGGATTCATGATCAGAAAA+TGG | 0.356858 | 4.1:+38378461 | MS.gene08586:CDS |
GACGGCGGTGGAGGAGGAGG+AGG | 0.358795 | 4.1:-38378295 | None:intergenic |
AACATGTTCTTGTCCACTTT+GGG | 0.363932 | 4.1:+38382673 | MS.gene08586:CDS |
GGGAAGCGGAGAGGGCTTCT+TGG | 0.365112 | 4.1:-38378251 | None:intergenic |
AAATCTTCTGATGGAGGGTT+AGG | 0.366932 | 4.1:-38381161 | None:intergenic |
TGAAACTTGTGTCATTTGTT+TGG | 0.367099 | 4.1:+38380713 | MS.gene08586:CDS |
TTAAAATAAACCCTAACAAC+TGG | 0.367871 | 4.1:-38378597 | None:intergenic |
TTGTTCTTGGGTTGAGTCCA+TGG | 0.371722 | 4.1:-38378133 | None:intergenic |
CAACATGTTCTTGTCCACTT+TGG | 0.375533 | 4.1:+38382672 | MS.gene08586:CDS |
GAAATTTCTAAGGCTGTTGT+TGG | 0.377843 | 4.1:+38378714 | MS.gene08586:CDS |
CTTCAGCAAGTTCAATCATA+TGG | 0.382234 | 4.1:-38381238 | None:intergenic |
TGATGAGGATAATTTGATAT+TGG | 0.382450 | 4.1:+38378692 | MS.gene08586:CDS |
GTCAAAGTCTTGTTGTTCTT+GGG | 0.385156 | 4.1:-38378145 | None:intergenic |
AGACTTTGACTTCTTGTTAA+CGG | 0.385702 | 4.1:+38378158 | MS.gene08586:CDS |
TTCTTTCGAGTTCTTGTAGC+TGG | 0.387934 | 4.1:-38378368 | None:intergenic |
GATAATTTCGAGAAACCGTT+TGG | 0.389894 | 4.1:+38378531 | MS.gene08586:CDS |
TCAACATGCCGGTGGAGGAT+TGG | 0.399904 | 4.1:+38378496 | MS.gene08586:CDS |
GAGCTTATGGCTTTGATTGA+AGG | 0.406533 | 4.1:+38378762 | MS.gene08586:CDS |
AGTGTTTCTTTGGCTGGGAT+TGG | 0.411786 | 4.1:+38378654 | MS.gene08586:CDS |
TGGTCAGTTAAGTGGAAAAT+GGG | 0.412108 | 4.1:+38380506 | MS.gene08586:intron |
CGATGAAGGTCCAGTTGTTA+GGG | 0.412132 | 4.1:+38378587 | MS.gene08586:CDS |
GGTGGAGGATTGGGATGAAT+GGG | 0.417241 | 4.1:+38378506 | MS.gene08586:CDS |
CGGTGGAGGATTGGGATGAA+TGG | 0.418354 | 4.1:+38378505 | MS.gene08586:CDS |
GGAGGAAGGTTGGTCGATGA+GGG | 0.427531 | 4.1:-38378271 | None:intergenic |
TTTGGTGAAGGGACGTCGTC+GGG | 0.440861 | 4.1:+38378549 | MS.gene08586:CDS |
TCATGCCTCGCCACAAGCCT+TGG | 0.442248 | 4.1:-38380603 | None:intergenic |
TTCTTGTCCACTTTGGGAAG+AGG | 0.461434 | 4.1:+38382679 | MS.gene08586:CDS |
GACATCAATGCAGAGCATCT+TGG | 0.465768 | 4.1:-38380987 | None:intergenic |
GTGAGAGTGTTTCTTTGGCT+GGG | 0.465990 | 4.1:+38378649 | MS.gene08586:CDS |
TGGAGGATTGGGATGAATGG+GGG | 0.467343 | 4.1:+38378508 | MS.gene08586:CDS |
AATGCAGAGCATCTTGGATA+AGG | 0.468088 | 4.1:-38380981 | None:intergenic |
TTAAGTAGTGTAGCGACCTT+CGG | 0.468151 | 4.1:-38380540 | None:intergenic |
GGAGGATTGGGATGAATGGG+GGG | 0.471014 | 4.1:+38378509 | MS.gene08586:CDS |
AGGAGGAAGGTTGGTCGATG+AGG | 0.472445 | 4.1:-38378272 | None:intergenic |
TTCGAGAAAGACGGCGGTGG+AGG | 0.476156 | 4.1:-38378304 | None:intergenic |
GTGGAGGATTGGGATGAATG+GGG | 0.479282 | 4.1:+38378507 | MS.gene08586:CDS |
TCGAGAAACCGTTTGGTGAA+GGG | 0.481668 | 4.1:+38378538 | MS.gene08586:CDS |
CTCCAAATTTCGTTGCTGCA+TGG | 0.488613 | 4.1:-38380925 | None:intergenic |
GAGAAAGACGGCGGTGGAGG+AGG | 0.492225 | 4.1:-38378301 | None:intergenic |
TTCAACTTAAAATCTTCTGA+TGG | 0.501863 | 4.1:-38381170 | None:intergenic |
GTCGATGAGGGAAGCGGAGA+GGG | 0.503652 | 4.1:-38378259 | None:intergenic |
TTCGAGAAACCGTTTGGTGA+AGG | 0.506356 | 4.1:+38378537 | MS.gene08586:CDS |
GACGACGTCCCTTCACCAAA+CGG | 0.510172 | 4.1:-38378546 | None:intergenic |
TGACATGTTATACCTACAAA+AGG | 0.516724 | 4.1:+38381132 | MS.gene08586:CDS |
AACTTAAAATCTTCTGATGG+AGG | 0.519846 | 4.1:-38381167 | None:intergenic |
AGTTGAAGTCTCTGGCATCA+AGG | 0.520502 | 4.1:+38381186 | MS.gene08586:CDS |
TCGACGAGGCGGAACGATGA+AGG | 0.523355 | 4.1:+38378573 | MS.gene08586:CDS |
TGGCATCAAGGAGTCTTTGG+AGG | 0.524698 | 4.1:+38381198 | MS.gene08586:CDS |
GTTGAAAACGGAGTCGGAGA+TGG | 0.525304 | 4.1:-38378334 | None:intergenic |
GCTACAAGAACTCGAAAGAA+TGG | 0.526817 | 4.1:+38378371 | MS.gene08586:CDS |
AAATTTCTAAGGCTGTTGTT+GGG | 0.528976 | 4.1:+38378715 | MS.gene08586:CDS |
CACCGGCATGTTGAAAATCT+CGG | 0.530826 | 4.1:-38378487 | None:intergenic |
ATTGTAAGCGAAATCGAGAT+CGG | 0.531400 | 4.1:-38378220 | None:intergenic |
ACTTAAAATCTTCTGATGGA+GGG | 0.531502 | 4.1:-38381166 | None:intergenic |
GGCATGTTGGCACCATTCCA+TGG | 0.534169 | 4.1:-38380830 | None:intergenic |
CATCCCTCATGAGGGCATGT+TGG | 0.535618 | 4.1:-38380843 | None:intergenic |
TAAGGGTTTAGTGAGTGAGG+AGG | 0.536413 | 4.1:+38378617 | MS.gene08586:CDS |
AAAACGGAGTCGGAGATGGA+TGG | 0.537187 | 4.1:-38378330 | None:intergenic |
CAGTTGATGGCTGTCAACAC+AGG | 0.537949 | 4.1:+38380763 | MS.gene08586:CDS |
ACTCACGGTGGCGGAATCCA+TGG | 0.542089 | 4.1:+38378194 | MS.gene08586:CDS |
GCTAGATTCAGCAGGCCTCA+TGG | 0.542852 | 4.1:-38380673 | None:intergenic |
GGCGCAACGCCACGAACTCA+CGG | 0.545514 | 4.1:+38378179 | MS.gene08586:CDS |
TCATTCTTGCATCCCTCATG+AGG | 0.546847 | 4.1:-38380852 | None:intergenic |
ATTCCGCCACCGTGAGTTCG+TGG | 0.547693 | 4.1:-38378188 | None:intergenic |
CATGCAGCAACGAAATTTGG+AGG | 0.554837 | 4.1:+38380926 | MS.gene08586:CDS |
CTGTTGTTGGGAATGAAAGT+AGG | 0.555764 | 4.1:+38378727 | MS.gene08586:CDS |
ACGCCACGAACTCACGGTGG+CGG | 0.555818 | 4.1:+38378185 | MS.gene08586:CDS |
GAGAGAGTTAGCGTTGAAAA+CGG | 0.559178 | 4.1:-38378346 | None:intergenic |
AACTTGTGTCATTTGTTTGG+AGG | 0.561454 | 4.1:+38380716 | MS.gene08586:CDS |
GTTTGGTGAAGGGACGTCGT+CGG | 0.563723 | 4.1:+38378548 | MS.gene08586:CDS |
TTTACACCGCTAGATTCAGC+AGG | 0.565712 | 4.1:-38380681 | None:intergenic |
GTTTCGGCTGCAAGGTTCCG+TGG | 0.568651 | 4.1:+38381099 | MS.gene08586:CDS |
GTTGCTACCACATGACATGC+AGG | 0.571834 | 4.1:+38381261 | MS.gene08586:CDS |
GTCTTCGAGAAAGACGGCGG+TGG | 0.574602 | 4.1:-38378307 | None:intergenic |
AAGAAATGTGTAAAATGTCA+TGG | 0.575908 | 4.1:+38381068 | MS.gene08586:CDS |
AGATCGTGATGATGATGAAG+AGG | 0.576559 | 4.1:+38382718 | MS.gene08586:CDS |
CATTCATCCCAATCCTCCAC+CGG | 0.577173 | 4.1:-38378504 | None:intergenic |
AAACGGAGTCGGAGATGGAT+GGG | 0.577431 | 4.1:-38378329 | None:intergenic |
TTACTGCAGTCCAAGGCTTG+TGG | 0.578524 | 4.1:+38380593 | MS.gene08586:CDS |
TGTTGCTGTTTGTGATGATG+AGG | 0.583207 | 4.1:+38378677 | MS.gene08586:CDS |
AATTTGCTTACTGCAGTCCA+AGG | 0.585420 | 4.1:+38380586 | MS.gene08586:CDS |
GAAATCGAGATCGGATTCCA+TGG | 0.587184 | 4.1:-38378211 | None:intergenic |
ATATTGTCCTCTTCCCAAAG+TGG | 0.589871 | 4.1:-38382686 | None:intergenic |
TGGCAATCGAGATGAACGAC+AGG | 0.590211 | 4.1:+38378391 | MS.gene08586:CDS |
GGACTACCGTTCTGATGAAG+AGG | 0.592970 | 4.1:+38382739 | MS.gene08586:CDS |
GTGAGTGAGGAGGTTGTGAG+AGG | 0.594469 | 4.1:+38378627 | MS.gene08586:CDS |
GGTGCCAACATGCCCTCATG+AGG | 0.596754 | 4.1:+38380839 | MS.gene08586:CDS |
GGTCGCTACACTACTTAATG+AGG | 0.603842 | 4.1:+38380545 | MS.gene08586:CDS |
GGATGGGTCTTCGAGAAAGA+CGG | 0.604880 | 4.1:-38378313 | None:intergenic |
GGTGAAGTTGCTCCATGGAA+TGG | 0.606666 | 4.1:+38380818 | MS.gene08586:CDS |
CATTCTTGCATCCCTCATGA+GGG | 0.608069 | 4.1:-38380851 | None:intergenic |
TGCAAGGTTCCGTGGCATAG+TGG | 0.608373 | 4.1:+38381107 | MS.gene08586:CDS |
AGGTTGGTCGATGAGGGAAG+CGG | 0.613007 | 4.1:-38378265 | None:intergenic |
GTGGAGGTGAAGTTGCTCCA+TGG | 0.619820 | 4.1:+38380813 | MS.gene08586:CDS |
GGTCGATGAGGGAAGCGGAG+AGG | 0.626159 | 4.1:-38378260 | None:intergenic |
GCAGTCCAAGGCTTGTGGCG+AGG | 0.628647 | 4.1:+38380598 | MS.gene08586:CDS |
TAAATGTGGAGCTGAGTGGA+GGG | 0.630494 | 4.1:+38382640 | MS.gene08586:CDS |
GGTATTGCTTGTCTTGCATG+AGG | 0.631054 | 4.1:+38380784 | MS.gene08586:CDS |
TGTAGTCCTCTTCATCAGAA+CGG | 0.631179 | 4.1:-38382745 | None:intergenic |
CATATGATTGAACTTGCTGA+AGG | 0.640994 | 4.1:+38381239 | MS.gene08586:CDS |
GTTAGCGTTGAAAACGGAGT+CGG | 0.649356 | 4.1:-38378340 | None:intergenic |
GTCTTGCATGAGGCAACATG+TGG | 0.659146 | 4.1:+38380794 | MS.gene08586:CDS |
TAGAGTACCTGCATGTCATG+TGG | 0.660971 | 4.1:-38381268 | None:intergenic |
TGAAAGTAGGAAAATTGCTG+TGG | 0.668978 | 4.1:+38378740 | MS.gene08586:CDS |
ATAAATGTGGAGCTGAGTGG+AGG | 0.671440 | 4.1:+38382639 | MS.gene08586:CDS |
GGACGTCGTCGGGTTCGACG+AGG | 0.671996 | 4.1:+38378559 | MS.gene08586:CDS |
CGTCGTCGGGTTCGACGAGG+CGG | 0.673668 | 4.1:+38378562 | MS.gene08586:CDS |
TTGCATGAGGCAACATGTGG+AGG | 0.673807 | 4.1:+38380797 | MS.gene08586:CDS |
GCTATAAATGTGGAGCTGAG+TGG | 0.679724 | 4.1:+38382636 | MS.gene08586:CDS |
AGAAGGACGATCTCAACCGT+CGG | 0.683370 | 4.1:+38378442 | MS.gene08586:CDS |
ATGAGGCCTGCTGAATCTAG+CGG | 0.684150 | 4.1:+38380675 | MS.gene08586:CDS |
CATGTCATACCACTATGCCA+CGG | 0.686231 | 4.1:-38381116 | None:intergenic |
ATGGGCTTCGAAACAGCCGA+AGG | 0.691008 | 4.1:+38380524 | MS.gene08586:CDS |
CAATTGTTTCTCAATCCATG+AGG | 0.697517 | 4.1:+38380658 | MS.gene08586:CDS |
GTGCCAACATGCCCTCATGA+GGG | 0.700338 | 4.1:+38380840 | MS.gene08586:CDS |
TGGGTCTTCGAGAAAGACGG+CGG | 0.730901 | 4.1:-38378310 | None:intergenic |
GCAACGCCACGAACTCACGG+TGG | 0.773826 | 4.1:+38378182 | MS.gene08586:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTGTATTATTTAATTATTT+TGG | + | chr4.1:38382255-38382274 | MS.gene08586:intron | 10.0% |
!! | ATAAATGATAACATTATAGA+GGG | + | chr4.1:38379441-38379460 | MS.gene08586:intron | 15.0% |
!! | ATAATTAAAGATGGAAATTA+AGG | + | chr4.1:38382395-38382414 | MS.gene08586:intron | 15.0% |
!! | TATAAATGATAACATTATAG+AGG | + | chr4.1:38379440-38379459 | MS.gene08586:intron | 15.0% |
!!! | ATATTTTTTATCAAGTTATC+TGG | + | chr4.1:38381403-38381422 | MS.gene08586:intron | 15.0% |
!!! | TTATGTCCATTTTATTTTTT+AGG | + | chr4.1:38380233-38380252 | MS.gene08586:intron | 15.0% |
!!! | TTCATAATTTATTTTCATGT+TGG | - | chr4.1:38379365-38379384 | None:intergenic | 15.0% |
!!! | TTTTTAACATCTTGTTTTAT+TGG | + | chr4.1:38380486-38380505 | MS.gene08586:intron | 15.0% |
!! | AACAGTCCTAAAAAATAAAA+TGG | - | chr4.1:38380242-38380261 | None:intergenic | 20.0% |
!! | ATAATACACTCAAAGTTTAA+AGG | - | chr4.1:38382245-38382264 | None:intergenic | 20.0% |
!! | ATATTAGTTATTGCAATTGA+AGG | + | chr4.1:38381853-38381872 | MS.gene08586:intron | 20.0% |
!! | TAATGAATTGGATAGAAATA+TGG | + | chr4.1:38379647-38379666 | MS.gene08586:intron | 20.0% |
!! | TAATGACCATACATATATTA+TGG | - | chr4.1:38379838-38379857 | None:intergenic | 20.0% |
!! | TATGAACCATAATATATGTA+TGG | + | chr4.1:38379829-38379848 | MS.gene08586:intron | 20.0% |
!! | TCAAAATGACAAAAGATAAT+TGG | + | chr4.1:38379945-38379964 | MS.gene08586:intron | 20.0% |
!! | TGAAACTTTATAATGCTTAT+TGG | + | chr4.1:38380293-38380312 | MS.gene08586:intron | 20.0% |
!! | TGACAAAAAAAATAAGTGAT+TGG | + | chr4.1:38379983-38380002 | MS.gene08586:intron | 20.0% |
!! | TTCCTAAAAATAAAAAGTCA+GGG | + | chr4.1:38381357-38381376 | MS.gene08586:intron | 20.0% |
!! | TTTGATATTGGAAATTTCTA+AGG | + | chr4.1:38378704-38378723 | MS.gene08586:CDS | 20.0% |
!!! | CTTTTTATTTTTAGGAAGAA+AGG | - | chr4.1:38381354-38381373 | None:intergenic | 20.0% |
! | AACCATGTATAATGATAACA+TGG | - | chr4.1:38382574-38382593 | None:intergenic | 25.0% |
! | AAGAAATGTGTAAAATGTCA+TGG | + | chr4.1:38381068-38381087 | MS.gene08586:CDS | 25.0% |
! | AATTATGAATAGTAGAGATG+AGG | + | chr4.1:38379376-38379395 | MS.gene08586:intron | 25.0% |
! | AATTGTTAACCATTGAATAC+TGG | - | chr4.1:38381776-38381795 | None:intergenic | 25.0% |
! | AGATCTAGAGATTAATGAAT+TGG | + | chr4.1:38379635-38379654 | MS.gene08586:intron | 25.0% |
! | ATAACGCTTATTGATAAGTT+AGG | + | chr4.1:38380357-38380376 | MS.gene08586:intron | 25.0% |
! | ATTGTTAACCATTGAATACT+GGG | - | chr4.1:38381775-38381794 | None:intergenic | 25.0% |
! | ATTTATCCTACAATTAAACC+AGG | - | chr4.1:38378959-38378978 | None:intergenic | 25.0% |
! | CTATATAGTATAAACAGTAG+CGG | - | chr4.1:38382306-38382325 | None:intergenic | 25.0% |
! | CTTCCTAAAAATAAAAAGTC+AGG | + | chr4.1:38381356-38381375 | MS.gene08586:intron | 25.0% |
! | GCAAAAGAAAAATATCATTC+AGG | - | chr4.1:38381672-38381691 | None:intergenic | 25.0% |
! | GTGTTTATAATCACAACATT+TGG | + | chr4.1:38382524-38382543 | MS.gene08586:intron | 25.0% |
! | GTTATATGGAACAAATTGTT+GGG | + | chr4.1:38379329-38379348 | MS.gene08586:intron | 25.0% |
! | TAAGGAAAGATTATTTGACA+AGG | + | chr4.1:38382413-38382432 | MS.gene08586:intron | 25.0% |
! | TGATGAGGATAATTTGATAT+TGG | + | chr4.1:38378692-38378711 | MS.gene08586:CDS | 25.0% |
! | TGTTATATGGAACAAATTGT+TGG | + | chr4.1:38379328-38379347 | MS.gene08586:intron | 25.0% |
! | TTAAAATAAACCCTAACAAC+TGG | - | chr4.1:38378600-38378619 | None:intergenic | 25.0% |
! | TTCAACTTAAAATCTTCTGA+TGG | - | chr4.1:38381173-38381192 | None:intergenic | 25.0% |
! | TTTATCCTACAATTAAACCA+GGG | - | chr4.1:38378958-38378977 | None:intergenic | 25.0% |
!! | AAAGTACCATTCAAGTTAAA+GGG | + | chr4.1:38379273-38379292 | MS.gene08586:intron | 25.0% |
!! | AATTTTATGTGTATTGTGAG+AGG | + | chr4.1:38382361-38382380 | MS.gene08586:intron | 25.0% |
!! | AGTTAAAGGGTGAATTTTAT+CGG | + | chr4.1:38379286-38379305 | MS.gene08586:intron | 25.0% |
!! | ATGACATTTTACACATTTCT+TGG | - | chr4.1:38381069-38381088 | None:intergenic | 25.0% |
!! | TGACATTTTACACATTTCTT+GGG | - | chr4.1:38381068-38381087 | None:intergenic | 25.0% |
!! | TTTTCTAATTGATACTGATC+AGG | + | chr4.1:38382069-38382088 | MS.gene08586:intron | 25.0% |
!!! | AGTCAATTTTTTTCAGTTGA+TGG | + | chr4.1:38380750-38380769 | MS.gene08586:CDS | 25.0% |
!!! | AGTTGTTAGGGTTTATTTTA+AGG | + | chr4.1:38378599-38378618 | MS.gene08586:CDS | 25.0% |
!!! | ATTTTGAAGTCAAGAATTTC+CGG | - | chr4.1:38380896-38380915 | None:intergenic | 25.0% |
!!! | GATAATGTTGTCTTTTTTTG+TGG | + | chr4.1:38380460-38380479 | MS.gene08586:intron | 25.0% |
!!! | GTTGTTAGGGTTTATTTTAA+GGG | + | chr4.1:38378600-38378619 | MS.gene08586:CDS | 25.0% |
!!! | TTCGAATTTTGCTATAAATG+TGG | + | chr4.1:38382626-38382645 | MS.gene08586:CDS | 25.0% |
!!! | TTCTTTTTTCTTTTTGCCAT+TGG | - | chr4.1:38379097-38379116 | None:intergenic | 25.0% |
!!! | TTGAAGCGTGTTATTTATTT+TGG | + | chr4.1:38378810-38378829 | MS.gene08586:CDS | 25.0% |
AACCGTTAATAGAAAACATG+AGG | - | chr4.1:38381517-38381536 | None:intergenic | 30.0% | |
AACTTAAAATCTTCTGATGG+AGG | - | chr4.1:38381170-38381189 | None:intergenic | 30.0% | |
AAGAATACTCAAATCACTAG+AGG | + | chr4.1:38379573-38379592 | MS.gene08586:intron | 30.0% | |
AATAAGTGAGATTCAAACCA+TGG | + | chr4.1:38379753-38379772 | MS.gene08586:intron | 30.0% | |
ACTTAAAATCTTCTGATGGA+GGG | - | chr4.1:38381169-38381188 | None:intergenic | 30.0% | |
AGTTTACAGATTTCCATGAA+TGG | + | chr4.1:38382486-38382505 | MS.gene08586:intron | 30.0% | |
ATACTCAAATAAACACACAC+AGG | - | chr4.1:38379062-38379081 | None:intergenic | 30.0% | |
ATGCAATGTTATGCTAAACT+AGG | + | chr4.1:38378993-38379012 | MS.gene08586:intron | 30.0% | |
ATTGCAATTGAAGGATTCTA+CGG | + | chr4.1:38381862-38381881 | MS.gene08586:intron | 30.0% | |
CATATCCTACAATTAAACCA+GGG | - | chr4.1:38378933-38378952 | None:intergenic | 30.0% | |
CTTGTTGCTAATTTCATTTG+TGG | + | chr4.1:38382547-38382566 | MS.gene08586:intron | 30.0% | |
GAGGTTGCTATAATTAAAGA+TGG | + | chr4.1:38382386-38382405 | MS.gene08586:intron | 30.0% | |
GGAAAATATATCTAGTTGTC+AGG | + | chr4.1:38382434-38382453 | MS.gene08586:intron | 30.0% | |
GTCCATGTTATCATTATACA+TGG | + | chr4.1:38382569-38382588 | MS.gene08586:intron | 30.0% | |
GTGATGAGCAAGTATTATTT+GGG | + | chr4.1:38381442-38381461 | MS.gene08586:intron | 30.0% | |
TAAACCATCAAATTCAAGCT+GGG | + | chr4.1:38379208-38379227 | MS.gene08586:intron | 30.0% | |
TACTCAAATAAACACACACA+GGG | - | chr4.1:38379061-38379080 | None:intergenic | 30.0% | |
TGAACATGTATAACATAACG+TGG | - | chr4.1:38381566-38381585 | None:intergenic | 30.0% | |
TGACATGTTATACCTACAAA+AGG | + | chr4.1:38381132-38381151 | MS.gene08586:CDS | 30.0% | |
TGGTAAATGATAGAGCTTTA+TGG | + | chr4.1:38379667-38379686 | MS.gene08586:intron | 30.0% | |
TGTGATGAGCAAGTATTATT+TGG | + | chr4.1:38381441-38381460 | MS.gene08586:intron | 30.0% | |
TTCCATATTATAGCAGTTAC+CGG | - | chr4.1:38380185-38380204 | None:intergenic | 30.0% | |
TTTCAATGCTGTTATTGCTT+TGG | + | chr4.1:38378785-38378804 | MS.gene08586:CDS | 30.0% | |
TTTGTTCCATATAACATCGT+CGG | - | chr4.1:38379324-38379343 | None:intergenic | 30.0% | |
! | AAAGGTATACATGATTTCAG+TGG | - | chr4.1:38382227-38382246 | None:intergenic | 30.0% |
! | AGACTTTGACTTCTTGTTAA+CGG | + | chr4.1:38378158-38378177 | MS.gene08586:CDS | 30.0% |
! | AGCCTCATGTTTTCTATTAA+CGG | + | chr4.1:38381512-38381531 | MS.gene08586:intron | 30.0% |
! | CAAAGTACCATTCAAGTTAA+AGG | + | chr4.1:38379272-38379291 | MS.gene08586:intron | 30.0% |
! | CAGTAAATTTTCTCAGTAAC+TGG | - | chr4.1:38380960-38380979 | None:intergenic | 30.0% |
! | CATTTAGAGAGAGTATAAGA+GGG | - | chr4.1:38378867-38378886 | None:intergenic | 30.0% |
!! | AAATTTCTAAGGCTGTTGTT+GGG | + | chr4.1:38378715-38378734 | MS.gene08586:CDS | 30.0% |
!! | AATTCACCCTTTAACTTGAA+TGG | - | chr4.1:38379282-38379301 | None:intergenic | 30.0% |
!! | CTTTAACTTGAATGGTACTT+TGG | - | chr4.1:38379274-38379293 | None:intergenic | 30.0% |
!! | TGAAACTTGTGTCATTTGTT+TGG | + | chr4.1:38380713-38380732 | MS.gene08586:CDS | 30.0% |
!! | TGTTTTATTGGTCAGTTAAG+TGG | + | chr4.1:38380498-38380517 | MS.gene08586:intron | 30.0% |
!! | TTGGGATTTAATTTGCTTAC+TGG | + | chr4.1:38381460-38381479 | MS.gene08586:intron | 30.0% |
!!! | AATGTTGTCTTTTTTTGTGG+AGG | + | chr4.1:38380463-38380482 | MS.gene08586:intron | 30.0% |
!!! | AGATTTTAAGTTGAAGTCTC+TGG | + | chr4.1:38381178-38381197 | MS.gene08586:CDS | 30.0% |
!!! | CTCCCTGACTTTTTATTTTT+AGG | - | chr4.1:38381362-38381381 | None:intergenic | 30.0% |
!!! | GGACTGTTTTTGTTTTAATG+TGG | + | chr4.1:38380254-38380273 | MS.gene08586:intron | 30.0% |
!!! | TTCAGGATATTTTCAAGTTC+TGG | + | chr4.1:38382168-38382187 | MS.gene08586:intron | 30.0% |
!!! | TTCGAGTGATTTTTAAGTGT+CGG | - | chr4.1:38381892-38381911 | None:intergenic | 30.0% |
AAAAACAATGCGTGAAGAGA+AGG | + | chr4.1:38378425-38378444 | MS.gene08586:CDS | 35.0% | |
AAAGTACAATTCAAGCCAAG+TGG | - | chr4.1:38380402-38380421 | None:intergenic | 35.0% | |
AACATGTTCTTGTCCACTTT+GGG | + | chr4.1:38382673-38382692 | MS.gene08586:CDS | 35.0% | |
AACCGGTAACTGCTATAATA+TGG | + | chr4.1:38380180-38380199 | MS.gene08586:intron | 35.0% | |
ACACACACACACATAAAGTA+TGG | - | chr4.1:38381807-38381826 | None:intergenic | 35.0% | |
ACCATGTACATAATTCGAAC+CGG | + | chr4.1:38380163-38380182 | MS.gene08586:intron | 35.0% | |
ACTGGAGCTTCTTATAAACA+GGG | + | chr4.1:38381478-38381497 | MS.gene08586:intron | 35.0% | |
AGACTACTCCAAAAGTCTTA+TGG | + | chr4.1:38381025-38381044 | MS.gene08586:CDS | 35.0% | |
AGGTCATCATCTCACTTATT+AGG | + | chr4.1:38382089-38382108 | MS.gene08586:intron | 35.0% | |
ATTGTAAGCGAAATCGAGAT+CGG | - | chr4.1:38378223-38378242 | None:intergenic | 35.0% | |
CACACACACACATAAAGTAT+GGG | - | chr4.1:38381806-38381825 | None:intergenic | 35.0% | |
CCTCTTATACTCTCTCTAAA+TGG | + | chr4.1:38378865-38378884 | MS.gene08586:intron | 35.0% | |
CTGCAATCAACATATGAGTA+AGG | - | chr4.1:38382599-38382618 | None:intergenic | 35.0% | |
CTTCAGCAAGTTCAATCATA+TGG | - | chr4.1:38381241-38381260 | None:intergenic | 35.0% | |
GAAACTCCAATGACAATTCA+AGG | - | chr4.1:38382151-38382170 | None:intergenic | 35.0% | |
GATAACATTATAGAGGGAGT+TGG | + | chr4.1:38379447-38379466 | MS.gene08586:intron | 35.0% | |
GATAATTTCGAGAAACCGTT+TGG | + | chr4.1:38378531-38378550 | MS.gene08586:CDS | 35.0% | |
GATTTCAGTGGCAAAATCTA+CGG | - | chr4.1:38382215-38382234 | None:intergenic | 35.0% | |
GCATATCCTACAATTAAACC+AGG | - | chr4.1:38378934-38378953 | None:intergenic | 35.0% | |
GCATTGCACACATAACTATA+AGG | + | chr4.1:38381690-38381709 | MS.gene08586:intron | 35.0% | |
GTAAACCATCAAATTCAAGC+TGG | + | chr4.1:38379207-38379226 | MS.gene08586:intron | 35.0% | |
TACTGGAGCTTCTTATAAAC+AGG | + | chr4.1:38381477-38381496 | MS.gene08586:intron | 35.0% | |
TCATCTCACTTATTAGGTCA+AGG | + | chr4.1:38382095-38382114 | MS.gene08586:intron | 35.0% | |
TCGGATTCATGATCAGAAAA+TGG | + | chr4.1:38378461-38378480 | MS.gene08586:CDS | 35.0% | |
TGAAAGTAGGAAAATTGCTG+TGG | + | chr4.1:38378740-38378759 | MS.gene08586:CDS | 35.0% | |
TGAATTGTCATTGGAGTTTC+AGG | + | chr4.1:38382151-38382170 | MS.gene08586:intron | 35.0% | |
TGACATTGAACTTCTTCCAA+GGG | - | chr4.1:38381938-38381957 | None:intergenic | 35.0% | |
TGATTGATGCGTGTTTAAGA+TGG | + | chr4.1:38380421-38380440 | MS.gene08586:intron | 35.0% | |
TGCATAAAAATGCTTGACCA+AGG | - | chr4.1:38381628-38381647 | None:intergenic | 35.0% | |
TGGTCAGTTAAGTGGAAAAT+GGG | + | chr4.1:38380506-38380525 | MS.gene08586:intron | 35.0% | |
TGTCTCACTCATCAAAACAA+GGG | - | chr4.1:38381962-38381981 | None:intergenic | 35.0% | |
TTGGTCAGTTAAGTGGAAAA+TGG | + | chr4.1:38380505-38380524 | MS.gene08586:intron | 35.0% | |
TTTGGGAAGAGGACAATATT+TGG | + | chr4.1:38382690-38382709 | MS.gene08586:CDS | 35.0% | |
! | ACAGAGTGATTTGTGTTGAT+TGG | + | chr4.1:38380085-38380104 | MS.gene08586:intron | 35.0% |
! | ATGTAATGTGCTGTTGTGTT+TGG | + | chr4.1:38379121-38379140 | MS.gene08586:intron | 35.0% |
! | CAAGCATTTTTATGCAAGTC+AGG | + | chr4.1:38381632-38381651 | MS.gene08586:intron | 35.0% |
! | CAATTGTTTCTCAATCCATG+AGG | + | chr4.1:38380658-38380677 | MS.gene08586:CDS | 35.0% |
! | CCATTTAGAGAGAGTATAAG+AGG | - | chr4.1:38378868-38378887 | None:intergenic | 35.0% |
! | GACTACTCCAAAAGTCTTAT+GGG | + | chr4.1:38381026-38381045 | MS.gene08586:CDS | 35.0% |
! | GATTGATGCGTGTTTAAGAT+GGG | + | chr4.1:38380422-38380441 | MS.gene08586:intron | 35.0% |
! | GTTAGGATTCAACCTTTTGT+AGG | - | chr4.1:38381147-38381166 | None:intergenic | 35.0% |
! | TCATATGTTGATTGCAGATG+CGG | + | chr4.1:38382602-38382621 | MS.gene08586:intron | 35.0% |
! | TGTCATGGTCTTTTCTGTTT+CGG | + | chr4.1:38381083-38381102 | MS.gene08586:CDS | 35.0% |
! | TTTTCTGATCATGAATCCGA+CGG | - | chr4.1:38378461-38378480 | None:intergenic | 35.0% |
!! | AACTTGTGTCATTTGTTTGG+AGG | + | chr4.1:38380716-38380735 | MS.gene08586:CDS | 35.0% |
!! | AGTCAAAGTCTTGTTGTTCT+TGG | - | chr4.1:38378149-38378168 | None:intergenic | 35.0% |
!! | CATATGATTGAACTTGCTGA+AGG | + | chr4.1:38381239-38381258 | MS.gene08586:CDS | 35.0% |
!! | GAAATTTCTAAGGCTGTTGT+TGG | + | chr4.1:38378714-38378733 | MS.gene08586:CDS | 35.0% |
!! | GTCAAAGTCTTGTTGTTCTT+GGG | - | chr4.1:38378148-38378167 | None:intergenic | 35.0% |
!! | TTTTAAGGGTTTAGTGAGTG+AGG | + | chr4.1:38378614-38378633 | MS.gene08586:CDS | 35.0% |
!!! | TTCCTTTCCTTTTTTCGCAT+TGG | - | chr4.1:38382000-38382019 | None:intergenic | 35.0% |
AAATAAACACACACAGGGAG+GGG | - | chr4.1:38379056-38379075 | None:intergenic | 40.0% | |
AAATCTTCTGATGGAGGGTT+AGG | - | chr4.1:38381164-38381183 | None:intergenic | 40.0% | |
AACCATGCAGCAACGAAATT+TGG | + | chr4.1:38380923-38380942 | MS.gene08586:CDS | 40.0% | |
ACTCAAATCACTAGAGGCAA+GGG | + | chr4.1:38379579-38379598 | MS.gene08586:intron | 40.0% | |
ATATTGTCCTCTTCCCAAAG+TGG | - | chr4.1:38382689-38382708 | None:intergenic | 40.0% | |
ATGCACCCTGGTTTAATTGT+AGG | + | chr4.1:38378925-38378944 | MS.gene08586:intron | 40.0% | |
ATGTGTATTGTGAGAGGAAG+AGG | + | chr4.1:38382367-38382386 | MS.gene08586:intron | 40.0% | |
ATTTCATTATGCATGCACCC+TGG | + | chr4.1:38378913-38378932 | MS.gene08586:intron | 40.0% | |
CAAATAAACACACACAGGGA+GGG | - | chr4.1:38379057-38379076 | None:intergenic | 40.0% | |
CAACATGTTCTTGTCCACTT+TGG | + | chr4.1:38382672-38382691 | MS.gene08586:CDS | 40.0% | |
CTGGAGCTTCTTATAAACAG+GGG | + | chr4.1:38381479-38381498 | MS.gene08586:intron | 40.0% | |
CTGTCTCACTCATCAAAACA+AGG | - | chr4.1:38381963-38381982 | None:intergenic | 40.0% | |
CTGTTGTTGGGAATGAAAGT+AGG | + | chr4.1:38378727-38378746 | MS.gene08586:CDS | 40.0% | |
GAAAATTGCTGTGGAGCTTA+TGG | + | chr4.1:38378749-38378768 | MS.gene08586:CDS | 40.0% | |
GAAAGTTCAGGTGTGAAAGT+TGG | + | chr4.1:38380011-38380030 | MS.gene08586:intron | 40.0% | |
GAAGATAGGCTTAGGTGATT+TGG | + | chr4.1:38379498-38379517 | MS.gene08586:intron | 40.0% | |
GACATTGAACTTCTTCCAAG+GGG | - | chr4.1:38381937-38381956 | None:intergenic | 40.0% | |
GAGTGAGACAGTGATTTGAT+TGG | + | chr4.1:38381972-38381991 | MS.gene08586:intron | 40.0% | |
GCTACAAGAACTCGAAAGAA+TGG | + | chr4.1:38378371-38378390 | MS.gene08586:CDS | 40.0% | |
GCTCATCACATCATATGACT+CGG | - | chr4.1:38381431-38381450 | None:intergenic | 40.0% | |
GTAAGACCGACGATGTTATA+TGG | + | chr4.1:38379315-38379334 | MS.gene08586:intron | 40.0% | |
GTCTCACTCATCAAAACAAG+GGG | - | chr4.1:38381961-38381980 | None:intergenic | 40.0% | |
GTGACATTGAACTTCTTCCA+AGG | - | chr4.1:38381939-38381958 | None:intergenic | 40.0% | |
GTGAGATTCAAACCATGGAT+TGG | + | chr4.1:38379758-38379777 | MS.gene08586:intron | 40.0% | |
TAACCATTGAATACTGGGCA+CGG | - | chr4.1:38381770-38381789 | None:intergenic | 40.0% | |
TAATTGTAGGATATGCACCC+TGG | + | chr4.1:38378938-38378957 | MS.gene08586:intron | 40.0% | |
TACTCAAATCACTAGAGGCA+AGG | + | chr4.1:38379578-38379597 | MS.gene08586:intron | 40.0% | |
TATTTGAGTATGTCGCCACT+AGG | + | chr4.1:38379071-38379090 | MS.gene08586:intron | 40.0% | |
TCAAATAAACACACACAGGG+AGG | - | chr4.1:38379058-38379077 | None:intergenic | 40.0% | |
TGAATGGCAATGCAAGTCAT+TGG | + | chr4.1:38382502-38382521 | MS.gene08586:intron | 40.0% | |
TGCCAATGCGAAAAAAGGAA+AGG | + | chr4.1:38381995-38382014 | MS.gene08586:intron | 40.0% | |
TGGAGCTTCTTATAAACAGG+GGG | + | chr4.1:38381480-38381499 | MS.gene08586:intron | 40.0% | |
TGGGTACCTTGAATTGTCAT+TGG | + | chr4.1:38382142-38382161 | MS.gene08586:intron | 40.0% | |
TGTAGTCCTCTTCATCAGAA+CGG | - | chr4.1:38382748-38382767 | None:intergenic | 40.0% | |
TGTTGTGTTTGGAAGAAGAG+TGG | + | chr4.1:38379132-38379151 | MS.gene08586:intron | 40.0% | |
TTAAGTAGTGTAGCGACCTT+CGG | - | chr4.1:38380543-38380562 | None:intergenic | 40.0% | |
TTTGGCCCCTTCAAAGAAAT+CGG | + | chr4.1:38382273-38382292 | MS.gene08586:intron | 40.0% | |
! | AACTTCTAGTTGACAGTTGC+CGG | + | chr4.1:38380874-38380893 | MS.gene08586:CDS | 40.0% |
! | AAGTTAGGAGCATGTGTTCT+TGG | + | chr4.1:38380372-38380391 | MS.gene08586:intron | 40.0% |
! | AATGCAGAGCATCTTGGATA+AGG | - | chr4.1:38380984-38381003 | None:intergenic | 40.0% |
! | AATTTGCTTACTGCAGTCCA+AGG | + | chr4.1:38380586-38380605 | MS.gene08586:CDS | 40.0% |
! | ACCTATAGTGGAAAAGATGG+TGG | + | chr4.1:38379476-38379495 | MS.gene08586:intron | 40.0% |
! | AGATCGTGATGATGATGAAG+AGG | + | chr4.1:38382718-38382737 | MS.gene08586:CDS | 40.0% |
! | AGCACCTATAGTGGAAAAGA+TGG | + | chr4.1:38379473-38379492 | MS.gene08586:intron | 40.0% |
! | ATGACTTGCATTGCCATTCA+TGG | - | chr4.1:38382502-38382521 | None:intergenic | 40.0% |
! | CAAATATGAGTCGAGTGTTG+AGG | + | chr4.1:38382022-38382041 | MS.gene08586:intron | 40.0% |
! | CATATGTTGATTGCAGATGC+GGG | + | chr4.1:38382603-38382622 | MS.gene08586:intron | 40.0% |
! | CTTATCCCACTAAGTTGGAT+CGG | - | chr4.1:38379712-38379731 | None:intergenic | 40.0% |
! | GAGAGAGTTAGCGTTGAAAA+CGG | - | chr4.1:38378349-38378368 | None:intergenic | 40.0% |
! | TACAGAGCCCATAAGACTTT+TGG | - | chr4.1:38381036-38381055 | None:intergenic | 40.0% |
! | TCCACCATCTTTTCCACTAT+AGG | - | chr4.1:38379480-38379499 | None:intergenic | 40.0% |
! | TGATTGGCTACAGAAAGTTC+AGG | + | chr4.1:38379999-38380018 | MS.gene08586:intron | 40.0% |
!! | ACCGGTTCGAATTATGTACA+TGG | - | chr4.1:38380167-38380186 | None:intergenic | 40.0% |
!! | AGATTCAAACCATGGATTGG+AGG | + | chr4.1:38379761-38379780 | MS.gene08586:intron | 40.0% |
!! | ATTGGTGCCAATGCGAAAAA+AGG | + | chr4.1:38381990-38382009 | MS.gene08586:intron | 40.0% |
!! | GAGCTTATGGCTTTGATTGA+AGG | + | chr4.1:38378762-38378781 | MS.gene08586:CDS | 40.0% |
!! | TGGAAAAGATGGTGGAAGAT+AGG | + | chr4.1:38379484-38379503 | MS.gene08586:intron | 40.0% |
!! | TGTTGCTGTTTGTGATGATG+AGG | + | chr4.1:38378677-38378696 | MS.gene08586:CDS | 40.0% |
!! | TTCTTTCGAGTTCTTGTAGC+TGG | - | chr4.1:38378371-38378390 | None:intergenic | 40.0% |
AATACACGTCCTCCAATCCA+TGG | - | chr4.1:38379773-38379792 | None:intergenic | 45.0% | |
ACCACCCAGCTTGAATTTGA+TGG | - | chr4.1:38379215-38379234 | None:intergenic | 45.0% | |
ACCATCAAATTCAAGCTGGG+TGG | + | chr4.1:38379211-38379230 | MS.gene08586:intron | 45.0% | |
ACGATGAAGGTCCAGTTGTT+AGG | + | chr4.1:38378586-38378605 | MS.gene08586:CDS | 45.0% | |
AGTGTTTCTTTGGCTGGGAT+TGG | + | chr4.1:38378654-38378673 | MS.gene08586:CDS | 45.0% | |
AGTTGAAGTCTCTGGCATCA+AGG | + | chr4.1:38381186-38381205 | MS.gene08586:CDS | 45.0% | |
AGTTGGAGTAGCACCTATAG+TGG | + | chr4.1:38379464-38379483 | MS.gene08586:intron | 45.0% | |
ATAAATGTGGAGCTGAGTGG+AGG | + | chr4.1:38382639-38382658 | MS.gene08586:CDS | 45.0% | |
ATGAGTAGTGAGACTGGAAG+AGG | + | chr4.1:38379411-38379430 | MS.gene08586:intron | 45.0% | |
ATGTAGCCGATCCAACTTAG+TGG | + | chr4.1:38379703-38379722 | MS.gene08586:intron | 45.0% | |
CAACTTAGTGGGATAAGGCT+TGG | + | chr4.1:38379715-38379734 | MS.gene08586:intron | 45.0% | |
CACCGGCATGTTGAAAATCT+CGG | - | chr4.1:38378490-38378509 | None:intergenic | 45.0% | |
CATGCAGCAACGAAATTTGG+AGG | + | chr4.1:38380926-38380945 | MS.gene08586:CDS | 45.0% | |
CATGTCATACCACTATGCCA+CGG | - | chr4.1:38381119-38381138 | None:intergenic | 45.0% | |
CATTCTTGCATCCCTCATGA+GGG | - | chr4.1:38380854-38380873 | None:intergenic | 45.0% | |
CGATCCAACTTAGTGGGATA+AGG | + | chr4.1:38379710-38379729 | MS.gene08586:intron | 45.0% | |
CGATGAAGGTCCAGTTGTTA+GGG | + | chr4.1:38378587-38378606 | MS.gene08586:CDS | 45.0% | |
CTCCAAATTTCGTTGCTGCA+TGG | - | chr4.1:38380928-38380947 | None:intergenic | 45.0% | |
GAAATCGAGATCGGATTCCA+TGG | - | chr4.1:38378214-38378233 | None:intergenic | 45.0% | |
GCTATAAATGTGGAGCTGAG+TGG | + | chr4.1:38382636-38382655 | MS.gene08586:CDS | 45.0% | |
GGGGCAAAATTGATCGTCAT+TGG | - | chr4.1:38381918-38381937 | None:intergenic | 45.0% | |
GGTATTGCTTGTCTTGCATG+AGG | + | chr4.1:38380784-38380803 | MS.gene08586:CDS | 45.0% | |
GGTCGCTACACTACTTAATG+AGG | + | chr4.1:38380545-38380564 | MS.gene08586:CDS | 45.0% | |
TAAATGTGGAGCTGAGTGGA+GGG | + | chr4.1:38382640-38382659 | MS.gene08586:CDS | 45.0% | |
TAAGGGTTTAGTGAGTGAGG+AGG | + | chr4.1:38378617-38378636 | MS.gene08586:CDS | 45.0% | |
TAGAAAACATGAGGCTTCCC+TGG | - | chr4.1:38381508-38381527 | None:intergenic | 45.0% | |
TAGGACTCGCATAATGCTAG+AGG | + | chr4.1:38379012-38379031 | MS.gene08586:intron | 45.0% | |
TCATTCTTGCATCCCTCATG+AGG | - | chr4.1:38380855-38380874 | None:intergenic | 45.0% | |
TGGGTGGTTGAAATGGAAGA+GGG | + | chr4.1:38379227-38379246 | MS.gene08586:intron | 45.0% | |
TGTAGCCGATCCAACTTAGT+GGG | + | chr4.1:38379704-38379723 | MS.gene08586:intron | 45.0% | |
TGTGTTCTTGGAATGCCACT+TGG | + | chr4.1:38380384-38380403 | MS.gene08586:intron | 45.0% | |
TTCAAGCTGGGTGGTTGAAA+TGG | + | chr4.1:38379220-38379239 | MS.gene08586:intron | 45.0% | |
TTCAGTGGCAAAATCTACGG+CGG | - | chr4.1:38382212-38382231 | None:intergenic | 45.0% | |
TTTACACCGCTAGATTCAGC+AGG | - | chr4.1:38380684-38380703 | None:intergenic | 45.0% | |
! | ACTAAGTTGGATCGGCTACA+TGG | - | chr4.1:38379704-38379723 | None:intergenic | 45.0% |
! | AGCTGGACCGATTTCTTTGA+AGG | - | chr4.1:38382283-38382302 | None:intergenic | 45.0% |
! | AGTATAAACAGTAGCGGAGC+TGG | - | chr4.1:38382300-38382319 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+TGG | - | chr4.1:38379717-38379736 | None:intergenic | 45.0% |
! | CTGGACCGATTTCTTTGAAG+GGG | - | chr4.1:38382281-38382300 | None:intergenic | 45.0% |
! | GACATCAATGCAGAGCATCT+TGG | - | chr4.1:38380990-38381009 | None:intergenic | 45.0% |
! | GCTGGACCGATTTCTTTGAA+GGG | - | chr4.1:38382282-38382301 | None:intergenic | 45.0% |
! | GTCCGAGATTTTCAACATGC+CGG | + | chr4.1:38378485-38378504 | MS.gene08586:CDS | 45.0% |
! | GTTAGCGTTGAAAACGGAGT+CGG | - | chr4.1:38378343-38378362 | None:intergenic | 45.0% |
! | TAGAGTACCTGCATGTCATG+TGG | - | chr4.1:38381271-38381290 | None:intergenic | 45.0% |
! | TCGAGAAACCGTTTGGTGAA+GGG | + | chr4.1:38378538-38378557 | MS.gene08586:CDS | 45.0% |
! | TCTTTTCTGTTTCGGCTGCA+AGG | + | chr4.1:38381091-38381110 | MS.gene08586:CDS | 45.0% |
! | TGACGATCAATTTTGCCCCT+TGG | + | chr4.1:38381919-38381938 | MS.gene08586:intron | 45.0% |
! | TTCGAGAAACCGTTTGGTGA+AGG | + | chr4.1:38378537-38378556 | MS.gene08586:CDS | 45.0% |
! | TTCTTGTCCACTTTGGGAAG+AGG | + | chr4.1:38382679-38382698 | MS.gene08586:CDS | 45.0% |
!! | AGATGGTGGAAGATAGGCTT+AGG | + | chr4.1:38379490-38379509 | MS.gene08586:intron | 45.0% |
!! | GAGAGGTGAGAGTGTTTCTT+TGG | + | chr4.1:38378644-38378663 | MS.gene08586:CDS | 45.0% |
!! | GTGAGAGTGTTTCTTTGGCT+GGG | + | chr4.1:38378649-38378668 | MS.gene08586:CDS | 45.0% |
!! | TATTAGGTCAAGGAGTACCG+TGG | + | chr4.1:38382105-38382124 | MS.gene08586:intron | 45.0% |
!! | TCTTTTTGCCATTGGCCTAG+TGG | - | chr4.1:38379089-38379108 | None:intergenic | 45.0% |
AAAACGGAGTCGGAGATGGA+TGG | - | chr4.1:38378333-38378352 | None:intergenic | 50.0% | |
AAACGGAGTCGGAGATGGAT+GGG | - | chr4.1:38378332-38378351 | None:intergenic | 50.0% | |
AACTCACAGAGAGCGATCCT+TGG | + | chr4.1:38381608-38381627 | MS.gene08586:intron | 50.0% | |
AGAAGGACGATCTCAACCGT+CGG | + | chr4.1:38378442-38378461 | MS.gene08586:CDS | 50.0% | |
ATGAGGCCTGCTGAATCTAG+CGG | + | chr4.1:38380675-38380694 | MS.gene08586:CDS | 50.0% | |
CATTCATCCCAATCCTCCAC+CGG | - | chr4.1:38378507-38378526 | None:intergenic | 50.0% | |
CTCTGGCATCAAGGAGTCTT+TGG | + | chr4.1:38381195-38381214 | MS.gene08586:CDS | 50.0% | |
CTGGGTGGTTGAAATGGAAG+AGG | + | chr4.1:38379226-38379245 | MS.gene08586:intron | 50.0% | |
CTTATAAACAGGGGGAGCCA+GGG | + | chr4.1:38381488-38381507 | MS.gene08586:intron | 50.0% | |
GATCGCTCTCTGTGAGTTTG+TGG | - | chr4.1:38381606-38381625 | None:intergenic | 50.0% | |
GGACTACCGTTCTGATGAAG+AGG | + | chr4.1:38382739-38382758 | MS.gene08586:CDS | 50.0% | |
GGATGGGTCTTCGAGAAAGA+CGG | - | chr4.1:38378316-38378335 | None:intergenic | 50.0% | |
GGTGAAGTTGCTCCATGGAA+TGG | + | chr4.1:38380818-38380837 | MS.gene08586:CDS | 50.0% | |
GGTGGAGGATTGGGATGAAT+GGG | + | chr4.1:38378506-38378525 | MS.gene08586:CDS | 50.0% | |
GTCTTGCATGAGGCAACATG+TGG | + | chr4.1:38380794-38380813 | MS.gene08586:CDS | 50.0% | |
GTGGAGGATTGGGATGAATG+GGG | + | chr4.1:38378507-38378526 | MS.gene08586:CDS | 50.0% | |
GTTGAAAACGGAGTCGGAGA+TGG | - | chr4.1:38378337-38378356 | None:intergenic | 50.0% | |
GTTGCTACCACATGACATGC+AGG | + | chr4.1:38381261-38381280 | MS.gene08586:CDS | 50.0% | |
TAGAGATGAGGATGTTGCGC+TGG | + | chr4.1:38379388-38379407 | MS.gene08586:intron | 50.0% | |
TCTTATAAACAGGGGGAGCC+AGG | + | chr4.1:38381487-38381506 | MS.gene08586:intron | 50.0% | |
TGCAAGTCAGGTCATGCGAT+TGG | + | chr4.1:38381644-38381663 | MS.gene08586:intron | 50.0% | |
TGGAGGATTGGGATGAATGG+GGG | + | chr4.1:38378508-38378527 | MS.gene08586:CDS | 50.0% | |
TGGCAATCGAGATGAACGAC+AGG | + | chr4.1:38378391-38378410 | MS.gene08586:CDS | 50.0% | |
TGGCATCAAGGAGTCTTTGG+AGG | + | chr4.1:38381198-38381217 | MS.gene08586:CDS | 50.0% | |
TTACTGCAGTCCAAGGCTTG+TGG | + | chr4.1:38380593-38380612 | MS.gene08586:CDS | 50.0% | |
TTCTGGCCCACCTATTGAAG+TGG | + | chr4.1:38382185-38382204 | MS.gene08586:intron | 50.0% | |
TTGCATGAGGCAACATGTGG+AGG | + | chr4.1:38380797-38380816 | MS.gene08586:CDS | 50.0% | |
! | CGAGATTTTCAACATGCCGG+TGG | + | chr4.1:38378488-38378507 | MS.gene08586:CDS | 50.0% |
! | GATTTTCAACATGCCGGTGG+AGG | + | chr4.1:38378491-38378510 | MS.gene08586:CDS | 50.0% |
!! | CAGTTGATGGCTGTCAACAC+AGG | + | chr4.1:38380763-38380782 | MS.gene08586:CDS | 50.0% |
!! | GGTGAGAGTGTTTCTTTGGC+TGG | + | chr4.1:38378648-38378667 | MS.gene08586:CDS | 50.0% |
ATGGGCTTCGAAACAGCCGA+AGG | + | chr4.1:38380524-38380543 | MS.gene08586:CDS | 55.0% | |
CAACATGCCGGTGGAGGATT+GGG | + | chr4.1:38378497-38378516 | MS.gene08586:CDS | 55.0% | |
CCACCGTGCCCAGTATTCAA+TGG | + | chr4.1:38381764-38381783 | MS.gene08586:intron | 55.0% | |
CCATTGAATACTGGGCACGG+TGG | - | chr4.1:38381767-38381786 | None:intergenic | 55.0% | |
CGCTGGATGAGTAGTGAGAC+TGG | + | chr4.1:38379405-38379424 | MS.gene08586:intron | 55.0% | |
CGGTGGAGGATTGGGATGAA+TGG | + | chr4.1:38378505-38378524 | MS.gene08586:CDS | 55.0% | |
CTACGGCGGACCACTTCAAT+AGG | - | chr4.1:38382198-38382217 | None:intergenic | 55.0% | |
GACGACGTCCCTTCACCAAA+CGG | - | chr4.1:38378549-38378568 | None:intergenic | 55.0% | |
GCTAGATTCAGCAGGCCTCA+TGG | - | chr4.1:38380676-38380695 | None:intergenic | 55.0% | |
GGAGGATTGGGATGAATGGG+GGG | + | chr4.1:38378509-38378528 | MS.gene08586:CDS | 55.0% | |
GGCATGTTGGCACCATTCCA+TGG | - | chr4.1:38380833-38380852 | None:intergenic | 55.0% | |
GGCGGACCACTTCAATAGGT+GGG | - | chr4.1:38382194-38382213 | None:intergenic | 55.0% | |
GTATGTCGCCACTAGGCCAA+TGG | + | chr4.1:38379078-38379097 | MS.gene08586:intron | 55.0% | |
GTGAGTGAGGAGGTTGTGAG+AGG | + | chr4.1:38378627-38378646 | MS.gene08586:CDS | 55.0% | |
GTGCCAACATGCCCTCATGA+GGG | + | chr4.1:38380840-38380859 | MS.gene08586:CDS | 55.0% | |
GTGGAGGTGAAGTTGCTCCA+TGG | + | chr4.1:38380813-38380832 | MS.gene08586:CDS | 55.0% | |
TCAACATGCCGGTGGAGGAT+TGG | + | chr4.1:38378496-38378515 | MS.gene08586:CDS | 55.0% | |
TGCAAGGTTCCGTGGCATAG+TGG | + | chr4.1:38381107-38381126 | MS.gene08586:CDS | 55.0% | |
TGGGTCTTCGAGAAAGACGG+CGG | - | chr4.1:38378313-38378332 | None:intergenic | 55.0% | |
TTTGGTGAAGGGACGTCGTC+GGG | + | chr4.1:38378549-38378568 | MS.gene08586:CDS | 55.0% | |
! | AGGAGGAAGGTTGGTCGATG+AGG | - | chr4.1:38378275-38378294 | None:intergenic | 55.0% |
! | AGGTTGGTCGATGAGGGAAG+CGG | - | chr4.1:38378268-38378287 | None:intergenic | 55.0% |
! | CATCCCTCATGAGGGCATGT+TGG | - | chr4.1:38380846-38380865 | None:intergenic | 55.0% |
! | GGAGGAAGGTTGGTCGATGA+GGG | - | chr4.1:38378274-38378293 | None:intergenic | 55.0% |
! | GTTTGGTGAAGGGACGTCGT+CGG | + | chr4.1:38378548-38378567 | MS.gene08586:CDS | 55.0% |
AGGAGGAGGAGGAGGAAGGT+TGG | - | chr4.1:38378284-38378303 | None:intergenic | 60.0% | |
ATTCCGCCACCGTGAGTTCG+TGG | - | chr4.1:38378191-38378210 | None:intergenic | 60.0% | |
CGGCGGACCACTTCAATAGG+TGG | - | chr4.1:38382195-38382214 | None:intergenic | 60.0% | |
GGTGCCAACATGCCCTCATG+AGG | + | chr4.1:38380839-38380858 | MS.gene08586:CDS | 60.0% | |
GTCGATGAGGGAAGCGGAGA+GGG | - | chr4.1:38378262-38378281 | None:intergenic | 60.0% | |
GTCTTCGAGAAAGACGGCGG+TGG | - | chr4.1:38378310-38378329 | None:intergenic | 60.0% | |
GTTTCGGCTGCAAGGTTCCG+TGG | + | chr4.1:38381099-38381118 | MS.gene08586:CDS | 60.0% | |
TCATGCCTCGCCACAAGCCT+TGG | - | chr4.1:38380606-38380625 | None:intergenic | 60.0% | |
TCGACGAGGCGGAACGATGA+AGG | + | chr4.1:38378573-38378592 | MS.gene08586:CDS | 60.0% | |
TTCGAGAAAGACGGCGGTGG+AGG | - | chr4.1:38378307-38378326 | None:intergenic | 60.0% | |
!! | ACTCACGGTGGCGGAATCCA+TGG | + | chr4.1:38378194-38378213 | MS.gene08586:CDS | 60.0% |
AAAGACGGCGGTGGAGGAGG+AGG | - | chr4.1:38378301-38378320 | None:intergenic | 65.0% | |
ACGCCACGAACTCACGGTGG+CGG | + | chr4.1:38378185-38378204 | MS.gene08586:CDS | 65.0% | |
GAGAAAGACGGCGGTGGAGG+AGG | - | chr4.1:38378304-38378323 | None:intergenic | 65.0% | |
GAGGAGGAGGAGGAGGAGGA+AGG | - | chr4.1:38378288-38378307 | None:intergenic | 65.0% | |
GCAACGCCACGAACTCACGG+TGG | + | chr4.1:38378182-38378201 | MS.gene08586:CDS | 65.0% | |
GCAGTCCAAGGCTTGTGGCG+AGG | + | chr4.1:38380598-38380617 | MS.gene08586:CDS | 65.0% | |
GGCGCAACGCCACGAACTCA+CGG | + | chr4.1:38378179-38378198 | MS.gene08586:CDS | 65.0% | |
GGGAAGCGGAGAGGGCTTCT+TGG | - | chr4.1:38378254-38378273 | None:intergenic | 65.0% | |
GGTCGATGAGGGAAGCGGAG+AGG | - | chr4.1:38378263-38378282 | None:intergenic | 65.0% | |
CGTCGTCGGGTTCGACGAGG+CGG | + | chr4.1:38378562-38378581 | MS.gene08586:CDS | 70.0% | |
GGACGTCGTCGGGTTCGACG+AGG | + | chr4.1:38378559-38378578 | MS.gene08586:CDS | 70.0% | |
GGTGGAGGAGGAGGAGGAGG+AGG | - | chr4.1:38378292-38378311 | None:intergenic | 70.0% | |
!! | GGGAGGGGCGCTCTGAAGCA+CGG | - | chr4.1:38379041-38379060 | None:intergenic | 70.0% |
GACGGCGGTGGAGGAGGAGG+AGG | - | chr4.1:38378298-38378317 | None:intergenic | 75.0% | |
GGCGGTGGAGGAGGAGGAGG+AGG | - | chr4.1:38378295-38378314 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 38378135 | 38382787 | 38378135 | ID=MS.gene08586 |
chr4.1 | mRNA | 38378135 | 38382787 | 38378135 | ID=MS.gene08586.t1;Parent=MS.gene08586 |
chr4.1 | exon | 38378135 | 38378857 | 38378135 | ID=MS.gene08586.t1.exon1;Parent=MS.gene08586.t1 |
chr4.1 | CDS | 38378135 | 38378857 | 38378135 | ID=cds.MS.gene08586.t1;Parent=MS.gene08586.t1 |
chr4.1 | exon | 38380513 | 38381282 | 38380513 | ID=MS.gene08586.t1.exon2;Parent=MS.gene08586.t1 |
chr4.1 | CDS | 38380513 | 38381282 | 38380513 | ID=cds.MS.gene08586.t1;Parent=MS.gene08586.t1 |
chr4.1 | exon | 38382619 | 38382787 | 38382619 | ID=MS.gene08586.t1.exon3;Parent=MS.gene08586.t1 |
chr4.1 | CDS | 38382619 | 38382787 | 38382619 | ID=cds.MS.gene08586.t1;Parent=MS.gene08586.t1 |
Gene Sequence |
Protein sequence |