Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25121.t1 | XP_003627298.1 | 93.3 | 732 | 42 | 4 | 1 | 731 | 1 | 726 | 0.00E+00 | 1345.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25121.t1 | Q9LVJ3 | 65.7 | 729 | 214 | 8 | 1 | 720 | 2 | 703 | 8.1e-254 | 877.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25121.t1 | Q4VYD1 | 93.3 | 732 | 42 | 4 | 1 | 731 | 1 | 726 | 0.0e+00 | 1345.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene25121 | 0.832807 | 7.65E-56 | -1.69E-46 |
| MS.gene049378 | MS.gene25121 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene049419 | MS.gene25121 | -0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene04991 | MS.gene25121 | -0.839732 | 1.33E-57 | -1.69E-46 |
| MS.gene050105 | MS.gene25121 | 0.88685 | 2.39E-72 | -1.69E-46 |
| MS.gene050508 | MS.gene25121 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene25121 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene25121 | 0.990087 | 5.35E-181 | -1.69E-46 |
| MS.gene051368 | MS.gene25121 | 0.813988 | 1.94E-51 | -1.69E-46 |
| MS.gene051541 | MS.gene25121 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene051924 | MS.gene25121 | -0.811264 | 7.64E-51 | -1.69E-46 |
| MS.gene051926 | MS.gene25121 | -0.822794 | 1.96E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene25121 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene052464 | MS.gene25121 | 0.802285 | 6.03E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene25121 | 0.866307 | 3.14E-65 | -1.69E-46 |
| MS.gene052675 | MS.gene25121 | 0.855194 | 7.43E-62 | -1.69E-46 |
| MS.gene052677 | MS.gene25121 | 0.86227 | 5.71E-64 | -1.69E-46 |
| MS.gene054479 | MS.gene25121 | 0.862849 | 3.79E-64 | -1.69E-46 |
| MS.gene055225 | MS.gene25121 | 0.823186 | 1.59E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene25121 | 0.870495 | 1.40E-66 | -1.69E-46 |
| MS.gene056480 | MS.gene25121 | 0.833355 | 5.59E-56 | -1.69E-46 |
| MS.gene056506 | MS.gene25121 | 0.810079 | 1.38E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene25121 | 0.837753 | 4.32E-57 | -1.69E-46 |
| MS.gene056849 | MS.gene25121 | 0.823009 | 1.74E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene25121 | -0.820331 | 7.26E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene25121 | 0.83634 | 9.91E-57 | -1.69E-46 |
| MS.gene058081 | MS.gene25121 | 0.839952 | 1.16E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene25121 | -0.847356 | 1.22E-59 | -1.69E-46 |
| MS.gene058429 | MS.gene25121 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene25121 | 0.804677 | 1.93E-49 | -1.69E-46 |
| MS.gene059952 | MS.gene25121 | 0.833902 | 4.08E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene25121 | 0.89889 | 3.40E-77 | -1.69E-46 |
| MS.gene060851 | MS.gene25121 | 0.920894 | 7.17E-88 | -1.69E-46 |
| MS.gene060852 | MS.gene25121 | 0.922598 | 7.98E-89 | -1.69E-46 |
| MS.gene060932 | MS.gene25121 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene25121 | 0.813085 | 3.06E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25121.t1 | MTR_8g020880 | 97.131 | 732 | 14 | 4 | 1 | 731 | 1 | 726 | 0.0 | 1463 |
| MS.gene25121.t1 | MTR_8g020880 | 96.667 | 630 | 14 | 4 | 1 | 629 | 1 | 624 | 0.0 | 1250 |
| MS.gene25121.t1 | MTR_7g108940 | 35.680 | 412 | 218 | 10 | 226 | 592 | 146 | 555 | 9.84e-63 | 224 |
| MS.gene25121.t1 | MTR_7g108940 | 35.680 | 412 | 218 | 10 | 226 | 592 | 146 | 555 | 1.84e-62 | 225 |
| MS.gene25121.t1 | MTR_5g007870 | 43.541 | 209 | 106 | 3 | 220 | 416 | 121 | 329 | 1.54e-37 | 151 |
| MS.gene25121.t1 | MTR_5g007870 | 50.394 | 127 | 54 | 2 | 442 | 559 | 446 | 572 | 2.25e-28 | 122 |
| MS.gene25121.t1 | MTR_4g123930 | 29.787 | 329 | 200 | 6 | 247 | 551 | 112 | 433 | 1.87e-34 | 137 |
| MS.gene25121.t1 | MTR_4g123930 | 29.846 | 325 | 197 | 6 | 251 | 551 | 116 | 433 | 2.08e-33 | 136 |
| MS.gene25121.t1 | MTR_4g123930 | 29.450 | 309 | 187 | 6 | 267 | 551 | 2 | 303 | 4.98e-32 | 127 |
| MS.gene25121.t1 | MTR_4g123930 | 29.450 | 309 | 187 | 6 | 267 | 551 | 2 | 303 | 1.89e-30 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25121.t1 | AT3G14050 | 67.168 | 731 | 200 | 8 | 1 | 720 | 2 | 703 | 0.0 | 906 |
| MS.gene25121.t1 | AT1G54130 | 64.229 | 752 | 205 | 14 | 1 | 729 | 2 | 712 | 0.0 | 892 |
| MS.gene25121.t1 | AT4G02260 | 39.316 | 351 | 188 | 7 | 226 | 551 | 148 | 498 | 3.19e-60 | 218 |
| MS.gene25121.t1 | AT4G02260 | 39.316 | 351 | 188 | 7 | 226 | 551 | 148 | 498 | 5.62e-60 | 218 |
| MS.gene25121.t1 | AT4G02260 | 39.316 | 351 | 188 | 7 | 226 | 551 | 148 | 498 | 5.82e-60 | 218 |
| MS.gene25121.t1 | AT4G02260 | 39.205 | 352 | 188 | 8 | 226 | 551 | 148 | 499 | 2.11e-58 | 213 |
| MS.gene25121.t1 | AT3G17470 | 31.212 | 330 | 198 | 7 | 245 | 551 | 107 | 430 | 4.32e-37 | 145 |
| MS.gene25121.t1 | AT3G17470 | 31.212 | 330 | 198 | 7 | 245 | 551 | 122 | 445 | 4.46e-36 | 144 |
| MS.gene25121.t1 | AT3G17470 | 31.212 | 330 | 198 | 7 | 245 | 551 | 107 | 430 | 4.85e-36 | 144 |
Find 180 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATCTTCAACTTGCAATT+TGG | 0.118666 | 8.4:-72776928 | None:intergenic |
| ATTAACTATGATTTCGAATT+AGG | 0.147309 | 8.4:+72773662 | MS.gene25121:CDS |
| GATGATATCCATGACATTTA+TGG | 0.178626 | 8.4:+72775887 | MS.gene25121:CDS |
| CTTACTTATGATTATATATA+CGG | 0.188737 | 8.4:+72774539 | MS.gene25121:CDS |
| GATGGTGTTGGTGGTGATTC+TGG | 0.210059 | 8.4:+72774121 | MS.gene25121:CDS |
| ATGCATTTGCAAGCAGAATT+TGG | 0.213922 | 8.4:+72776185 | MS.gene25121:CDS |
| TGCTTTGGGTTCTTCTTGTT+TGG | 0.222221 | 8.4:+72774045 | MS.gene25121:CDS |
| TTGTGAAGAGTTTGTTATTA+AGG | 0.223595 | 8.4:+72774264 | MS.gene25121:CDS |
| ATTTCTTATCATGTCATTTC+TGG | 0.239861 | 8.4:+72775597 | MS.gene25121:CDS |
| TCGAGTTTGCACAAAATTCT+TGG | 0.262479 | 8.4:-72776792 | None:intergenic |
| TTGCAATTTGGATCACTTAC+AGG | 0.265645 | 8.4:-72776916 | None:intergenic |
| CTGAATTTCTTCCCTATATT+CGG | 0.288112 | 8.4:-72776995 | None:intergenic |
| CTCGACAGTACTAGATTTGT+TGG | 0.308633 | 8.4:+72776810 | MS.gene25121:CDS |
| TAGAAGTTGTTCACCGGTTA+TGG | 0.315278 | 8.4:+72775954 | MS.gene25121:CDS |
| CAATCAGGCTTGTAAGAATA+TGG | 0.320693 | 8.4:-72776395 | None:intergenic |
| TCCGTATTTGCAGCATTGTT+TGG | 0.330409 | 8.4:+72774430 | MS.gene25121:CDS |
| GATTATATATACGGGATGTT+TGG | 0.331195 | 8.4:+72774548 | MS.gene25121:CDS |
| ACCGATTAGGAATAGCTAAT+TGG | 0.332077 | 8.4:+72775430 | MS.gene25121:CDS |
| AAGAGCTGTCCTCATTAAAT+TGG | 0.336185 | 8.4:+72775308 | MS.gene25121:CDS |
| CGACGAAGTTTGGTGGATCT+TGG | 0.336434 | 8.4:+72773882 | MS.gene25121:CDS |
| TCCAATTAGCTATTCCTAAT+CGG | 0.340721 | 8.4:-72775431 | None:intergenic |
| GCGACGGCGGCGTCCACGTC+GGG | 0.342750 | 8.4:+72773713 | MS.gene25121:CDS |
| GCACCTTTGGCCAACCGATT+AGG | 0.347291 | 8.4:+72775417 | MS.gene25121:CDS |
| ACAAGTATCTGACCGAATAT+AGG | 0.349388 | 8.4:+72776983 | MS.gene25121:CDS |
| TTTGGAAACTGCTGTGTTGT+TGG | 0.368793 | 8.4:+72774448 | MS.gene25121:CDS |
| GGTGGTGGTGGTGAATTTGA+TGG | 0.370524 | 8.4:+72774103 | MS.gene25121:CDS |
| ATGATATCCATGACATTTAT+GGG | 0.372392 | 8.4:+72775888 | MS.gene25121:CDS |
| TGGGTTTGTGAGAAGTGCTT+TGG | 0.378293 | 8.4:+72774030 | MS.gene25121:CDS |
| ATCAACAACTTCTTAGCATA+AGG | 0.384347 | 8.4:-72774214 | None:intergenic |
| GAGAGATCATAGTCCAGTTT+CGG | 0.385330 | 8.4:+72773907 | MS.gene25121:CDS |
| GAAAGCTCTTTGTGCTGTAC+AGG | 0.386440 | 8.4:-72775492 | None:intergenic |
| GGCGTCCACGTCGGGGAAAT+CGG | 0.402503 | 8.4:+72773721 | MS.gene25121:CDS |
| ATTCTTACAAGCCTGATTGC+GGG | 0.405333 | 8.4:+72776399 | MS.gene25121:CDS |
| TAACCGGTGAACAACTTCTA+AGG | 0.405585 | 8.4:-72775951 | None:intergenic |
| CTTTGCAAACCTCTGCTGCT+TGG | 0.408434 | 8.4:-72775376 | None:intergenic |
| TTGTTCGAATTTGTACTTCA+AGG | 0.408493 | 8.4:-72776157 | None:intergenic |
| CCTCCCTGATCGAATTGTTC+CGG | 0.409534 | 8.4:-72773981 | None:intergenic |
| GGTCCATCCTGCCCGCAATC+AGG | 0.410211 | 8.4:-72776410 | None:intergenic |
| GATGACACTAGATGCATTAC+CGG | 0.413123 | 8.4:+72775350 | MS.gene25121:CDS |
| GGTGGTGAATTTGATGGTGT+TGG | 0.416217 | 8.4:+72774109 | MS.gene25121:CDS |
| GGGTTTGTGAGAAGTGCTTT+GGG | 0.417938 | 8.4:+72774031 | MS.gene25121:CDS |
| GGAGTTGCTGATTTAGTTGA+AGG | 0.421830 | 8.4:+72774575 | MS.gene25121:CDS |
| TCCAAACAATGCTGCAAATA+CGG | 0.422488 | 8.4:-72774431 | None:intergenic |
| CAAGTATCTGACCGAATATA+GGG | 0.424375 | 8.4:+72776984 | MS.gene25121:CDS |
| GAGGTTTGCAAAGGAAACTT+TGG | 0.428632 | 8.4:+72775386 | MS.gene25121:CDS |
| AACCTCTGCTGCTTGGCAAC+CGG | 0.433003 | 8.4:-72775369 | None:intergenic |
| ATGGGTGCCGGTGCGGGTAC+CGG | 0.442415 | 8.4:+72773962 | MS.gene25121:CDS |
| ATCTCTGCACACTGTGGTGA+TGG | 0.443111 | 8.4:+72776118 | MS.gene25121:CDS |
| AGTAAAGATTCCACTTCTGT+TGG | 0.443308 | 8.4:+72776317 | MS.gene25121:CDS |
| TGTTTGGATTATGATTCTAC+TGG | 0.445310 | 8.4:+72774061 | MS.gene25121:CDS |
| AATTTGGATTCGCTGCTCAT+TGG | 0.445751 | 8.4:+72776201 | MS.gene25121:CDS |
| TCCAAATTGCAAGTTGAAGA+TGG | 0.447857 | 8.4:+72776927 | MS.gene25121:CDS |
| CATGCACCTCAGACCATAAC+CGG | 0.449375 | 8.4:-72775967 | None:intergenic |
| ACAGGCTTGTGATTCAGTCT+TGG | 0.449925 | 8.4:-72776898 | None:intergenic |
| TACAACATACCCATTGAACT+TGG | 0.450219 | 8.4:-72776017 | None:intergenic |
| ATGCTACTACTACACGAAAC+AGG | 0.451567 | 8.4:-72773941 | None:intergenic |
| AATTCAACAGTAGTTGCTGC+TGG | 0.454268 | 8.4:+72774485 | MS.gene25121:CDS |
| ATACATTGCCCCAAGTTCAA+TGG | 0.454579 | 8.4:+72776007 | MS.gene25121:CDS |
| ACTCATTGCTTCGCACTGCC+AGG | 0.456952 | 8.4:-72776297 | None:intergenic |
| TAGATTTGTTGGAGAGGGTC+GGG | 0.457657 | 8.4:+72776821 | MS.gene25121:CDS |
| TGGTGGTGATTCTGGAATTG+TGG | 0.457934 | 8.4:+72774129 | MS.gene25121:CDS |
| GGCGACGGCGGCGTCCACGT+CGG | 0.462016 | 8.4:+72773712 | MS.gene25121:CDS |
| GTGGTGAAGCATGTTCCGTT+TGG | 0.465719 | 8.4:+72773782 | MS.gene25121:CDS |
| ATCTTCGTCACCGGCGTCGA+CGG | 0.467911 | 8.4:+72773691 | MS.gene25121:CDS |
| GCCGCCGTCGCCGTCGACGC+CGG | 0.468779 | 8.4:-72773701 | None:intergenic |
| TTGGATTCGCTGCTCATTGG+AGG | 0.470246 | 8.4:+72776204 | MS.gene25121:CDS |
| AGTAGCATGGGTGCCGGTGC+GGG | 0.474221 | 8.4:+72773956 | MS.gene25121:CDS |
| TACATTGCCCCAAGTTCAAT+GGG | 0.477235 | 8.4:+72776008 | MS.gene25121:CDS |
| GCTGTGTTGTTGGCTTTGAT+CGG | 0.482957 | 8.4:+72774458 | MS.gene25121:CDS |
| GCCTCAATTCTTCCTTCAGA+GGG | 0.483136 | 8.4:-72776876 | None:intergenic |
| CGATCAGGGAGGGGAAGTAC+TGG | 0.484040 | 8.4:+72773992 | MS.gene25121:CDS |
| ACGTCGGGGAAATCGGTGAC+GGG | 0.484642 | 8.4:+72773728 | MS.gene25121:CDS |
| GGTACCGGAACAATTCGATC+AGG | 0.485761 | 8.4:+72773977 | MS.gene25121:CDS |
| TGTTCGAATTTGTACTTCAA+GGG | 0.486391 | 8.4:-72776156 | None:intergenic |
| GCTGCGCTTGATTGTTGATA+AGG | 0.487554 | 8.4:+72775910 | MS.gene25121:CDS |
| AGCTTTCTCAGCTTCACAAA+AGG | 0.487843 | 8.4:-72774287 | None:intergenic |
| AGATTACGCGGTGGTGGTGG+TGG | 0.491666 | 8.4:+72774088 | MS.gene25121:CDS |
| GGGAGGGGAAGTACTGGTGG+TGG | 0.494745 | 8.4:+72773998 | MS.gene25121:CDS |
| GGGCTCGATGGGTTGTCACC+TGG | 0.495606 | 8.4:+72776279 | MS.gene25121:CDS |
| GTTAGATTACGCGGTGGTGG+TGG | 0.504725 | 8.4:+72774085 | MS.gene25121:CDS |
| AGATACTTGTCAGGTATGGC+TGG | 0.505901 | 8.4:-72776970 | None:intergenic |
| AGAGCTTTCGTCAAAGCTTG+TGG | 0.510991 | 8.4:+72775506 | MS.gene25121:CDS |
| TTACTTATGATTATATATAC+GGG | 0.511289 | 8.4:+72774540 | MS.gene25121:CDS |
| TTACGCGGTGGTGGTGGTGG+TGG | 0.511301 | 8.4:+72774091 | MS.gene25121:CDS |
| TATTCGGTCAGATACTTGTC+AGG | 0.512446 | 8.4:-72776979 | None:intergenic |
| ATCTTCATCACCACCACCAC+CGG | 0.515186 | 8.4:-72773816 | None:intergenic |
| CGCTGCTCATTGGAGGTACA+AGG | 0.516170 | 8.4:+72776211 | MS.gene25121:CDS |
| TTCTTCATATGTGCTTCAGA+TGG | 0.516537 | 8.4:+72776250 | MS.gene25121:CDS |
| GGTGAATTTGATGGTGTTGG+TGG | 0.516562 | 8.4:+72774112 | MS.gene25121:CDS |
| CGGTTATGGTCTGAGGTGCA+TGG | 0.519568 | 8.4:+72775968 | MS.gene25121:CDS |
| CTAGATTTGTTGGAGAGGGT+CGG | 0.525008 | 8.4:+72776820 | MS.gene25121:CDS |
| TTACAAGCCTGATTGCGGGC+AGG | 0.526518 | 8.4:+72776403 | MS.gene25121:CDS |
| GGAGGGGAAGTACTGGTGGT+GGG | 0.527525 | 8.4:+72773999 | MS.gene25121:CDS |
| ACCGGCGTCGACGGCGACGG+CGG | 0.529815 | 8.4:+72773700 | MS.gene25121:CDS |
| CACGTCGGGGAAATCGGTGA+CGG | 0.532007 | 8.4:+72773727 | MS.gene25121:CDS |
| GGCCTCAATTCTTCCTTCAG+AGG | 0.533475 | 8.4:-72776877 | None:intergenic |
| GTCACCGGCGTCGACGGCGA+CGG | 0.534253 | 8.4:+72773697 | MS.gene25121:CDS |
| TGAGAAAGCTCATAGAGGAC+AGG | 0.534366 | 8.4:+72774300 | MS.gene25121:CDS |
| TGGTGATGAAGATGAATTGA+AGG | 0.535373 | 8.4:+72773826 | MS.gene25121:CDS |
| ACAACATACCCATTGAACTT+GGG | 0.535483 | 8.4:-72776016 | None:intergenic |
| AGATGGTTGAGTGGGCTCGA+TGG | 0.537950 | 8.4:+72776267 | MS.gene25121:CDS |
| GATGGTTGAGTGGGCTCGAT+GGG | 0.540134 | 8.4:+72776268 | MS.gene25121:CDS |
| CGGGCTAACTGTATCAAGCA+TGG | 0.545579 | 8.4:+72777032 | MS.gene25121:CDS |
| AACATATAGGTTCCCTCTGA+AGG | 0.546405 | 8.4:+72776864 | MS.gene25121:CDS |
| GACAGTTATCAGCATGAGAA+GGG | 0.546477 | 8.4:-72776373 | None:intergenic |
| TGTTTCGTGTAGTAGTAGCA+TGG | 0.546500 | 8.4:+72773943 | MS.gene25121:CDS |
| ATCGACAAATCCAACAGAAG+TGG | 0.547140 | 8.4:-72776327 | None:intergenic |
| ATATACGGGATGTTTGGAGC+TGG | 0.549390 | 8.4:+72774554 | MS.gene25121:CDS |
| CCAAATTGCAAGTTGAAGAT+GGG | 0.550752 | 8.4:+72776928 | MS.gene25121:CDS |
| AATTGTTCCGGTACCCGCAC+CGG | 0.551906 | 8.4:-72773969 | None:intergenic |
| ATTAGCTATTCCTAATCGGT+TGG | 0.552553 | 8.4:-72775427 | None:intergenic |
| CTCTTGCATCTGCCATTGCA+AGG | 0.553256 | 8.4:-72775290 | None:intergenic |
| TTGCAAGGAACATTGTATGC+AGG | 0.553528 | 8.4:-72775275 | None:intergenic |
| GAGCAAGCACTCAAAGATGA+AGG | 0.553848 | 8.4:+72775573 | MS.gene25121:CDS |
| GCATACAATGTTCCTTGCAA+TGG | 0.556040 | 8.4:+72775278 | MS.gene25121:CDS |
| ATTCAACAGTAGTTGCTGCT+GGG | 0.558656 | 8.4:+72774486 | MS.gene25121:CDS |
| TAGTAGCATGGGTGCCGGTG+CGG | 0.559495 | 8.4:+72773955 | MS.gene25121:CDS |
| AAGCCTGATTGCGGGCAGGA+TGG | 0.560710 | 8.4:+72776407 | MS.gene25121:CDS |
| TATTCTTACAAGCCTGATTG+CGG | 0.560842 | 8.4:+72776398 | MS.gene25121:CDS |
| GCTACTGCAAGCAGCATGGT+TGG | 0.562551 | 8.4:+72777063 | MS.gene25121:CDS |
| GGTCAGATACTTGTCAGGTA+TGG | 0.563602 | 8.4:-72776974 | None:intergenic |
| AGCGCAGCCCATAAATGTCA+TGG | 0.564123 | 8.4:-72775895 | None:intergenic |
| TACCGGTTGCCAAGCAGCAG+AGG | 0.564469 | 8.4:+72775367 | MS.gene25121:CDS |
| GGAACAATTCGATCAGGGAG+GGG | 0.565296 | 8.4:+72773983 | MS.gene25121:CDS |
| CTTATCATGTCATTTCTGGA+CGG | 0.571086 | 8.4:+72775601 | MS.gene25121:CDS |
| CAACATACCCATTGAACTTG+GGG | 0.571860 | 8.4:-72776015 | None:intergenic |
| GGACAGTTATCAGCATGAGA+AGG | 0.573734 | 8.4:-72776374 | None:intergenic |
| GCTGTAGGTTGACAACATAT+AGG | 0.573805 | 8.4:+72776851 | MS.gene25121:CDS |
| TGTTCACCGGTTATGGTCTG+AGG | 0.575398 | 8.4:+72775961 | MS.gene25121:CDS |
| GAGTTGCTGATTTAGTTGAA+GGG | 0.580287 | 8.4:+72774576 | MS.gene25121:CDS |
| TCTCTGCACACTGTGGTGAT+GGG | 0.580339 | 8.4:+72776119 | MS.gene25121:CDS |
| ATCGATCAGCCAATTTAATG+AGG | 0.581475 | 8.4:-72775317 | None:intergenic |
| GTTTCGTGTAGTAGTAGCAT+GGG | 0.582976 | 8.4:+72773944 | MS.gene25121:CDS |
| AAGCCTTAGAAGTTGTTCAC+CGG | 0.583932 | 8.4:+72775948 | MS.gene25121:CDS |
| GGGTCGGGCGAGCAAGCTGT+AGG | 0.584040 | 8.4:+72776836 | MS.gene25121:CDS |
| ACTGAGTCACTTAAGCAAGC+TGG | 0.586111 | 8.4:+72775209 | MS.gene25121:CDS |
| AGTACTAGATTTGTTGGAGA+GGG | 0.591903 | 8.4:+72776816 | MS.gene25121:CDS |
| CGGAACAATTCGATCAGGGA+GGG | 0.592758 | 8.4:+72773982 | MS.gene25121:CDS |
| GGTTATGGTCTGAGGTGCAT+GGG | 0.593196 | 8.4:+72775969 | MS.gene25121:CDS |
| CACACTGTGGTGATGGGTGA+AGG | 0.596315 | 8.4:+72776125 | MS.gene25121:CDS |
| TCGGGGAAATCGGTGACGGG+TGG | 0.596829 | 8.4:+72773731 | MS.gene25121:CDS |
| AAAGCTCTTTGTGCTGTACA+GGG | 0.599815 | 8.4:-72775491 | None:intergenic |
| GGTGTAGAACACACACTACT+CGG | 0.601489 | 8.4:-72773632 | None:intergenic |
| ATTAGGAATAGCTAATTGGA+AGG | 0.601826 | 8.4:+72775434 | MS.gene25121:CDS |
| TTCAGCGAATGTATGATCGC+GGG | 0.602849 | 8.4:+72777013 | MS.gene25121:CDS |
| GCGCTTGATTGTTGATAAGG+AGG | 0.603331 | 8.4:+72775913 | MS.gene25121:CDS |
| TGTAGTAGTAGCATGGGTGC+CGG | 0.604049 | 8.4:+72773950 | MS.gene25121:CDS |
| GTTCGAATTTGTACTTCAAG+GGG | 0.605083 | 8.4:-72776155 | None:intergenic |
| ATTCCTAATCGGTTGGCCAA+AGG | 0.606063 | 8.4:-72775420 | None:intergenic |
| CAAGCAGCAGAGGTTTGCAA+AGG | 0.607809 | 8.4:+72775377 | MS.gene25121:CDS |
| GCATGAGAAGGGAACTTGCA+AGG | 0.608349 | 8.4:-72776362 | None:intergenic |
| TCAGGGAGGGGAAGTACTGG+TGG | 0.609082 | 8.4:+72773995 | MS.gene25121:CDS |
| TGTGCTTCAGATGGTTGAGT+GGG | 0.610056 | 8.4:+72776259 | MS.gene25121:CDS |
| ATGTGCTTCAGATGGTTGAG+TGG | 0.615998 | 8.4:+72776258 | MS.gene25121:CDS |
| AGGATCTAGATCTTCGTCAC+CGG | 0.616184 | 8.4:+72773682 | MS.gene25121:CDS |
| GGGCTAACTGTATCAAGCAT+GGG | 0.621683 | 8.4:+72777033 | MS.gene25121:CDS |
| TGTGGTGATGGGTGAAGGCA+AGG | 0.624487 | 8.4:+72776130 | MS.gene25121:CDS |
| TACTGCTACTGCAAGCAGCA+TGG | 0.624524 | 8.4:+72777059 | MS.gene25121:CDS |
| GGTGTTAGATTACGCGGTGG+TGG | 0.624885 | 8.4:+72774082 | MS.gene25121:CDS |
| AAATCATAGTTAATCTGATG+CGG | 0.628203 | 8.4:-72773653 | None:intergenic |
| TCCCTCTGAAGGAAGAATTG+AGG | 0.628438 | 8.4:+72776875 | MS.gene25121:CDS |
| CAAGATCCACCAAACTTCGT+CGG | 0.628498 | 8.4:-72773881 | None:intergenic |
| CAGTACTAGATTTGTTGGAG+AGG | 0.642485 | 8.4:+72776815 | MS.gene25121:CDS |
| CGACGGCGGCGTCCACGTCG+GGG | 0.645433 | 8.4:+72773714 | MS.gene25121:CDS |
| TGTTTGTAGATGCGAGCTAG+TGG | 0.645770 | 8.4:+72774404 | MS.gene25121:intron |
| GAAGCTGAGAAAGCTCATAG+AGG | 0.646306 | 8.4:+72774295 | MS.gene25121:CDS |
| TCTACTGGTGTTAGATTACG+CGG | 0.646568 | 8.4:+72774076 | MS.gene25121:CDS |
| AGTTGCTGATTTAGTTGAAG+GGG | 0.648111 | 8.4:+72774577 | MS.gene25121:CDS |
| TCAATCATGATAACAAACAC+AGG | 0.655763 | 8.4:-72776431 | None:intergenic |
| CAAGGAACATTGTATGCAGG+CGG | 0.659437 | 8.4:-72775272 | None:intergenic |
| GTACCGGAACAATTCGATCA+GGG | 0.659700 | 8.4:+72773978 | MS.gene25121:CDS |
| GGAACATGCTTCACCACCGT+CGG | 0.663337 | 8.4:-72773776 | None:intergenic |
| ATTCAGCGAATGTATGATCG+CGG | 0.666404 | 8.4:+72777012 | MS.gene25121:CDS |
| CGTCACCGATTTCCCCGACG+TGG | 0.668319 | 8.4:-72773726 | None:intergenic |
| CCGGAACAATTCGATCAGGG+AGG | 0.701868 | 8.4:+72773981 | MS.gene25121:CDS |
| TATCATGATTGAGAATGACA+AGG | 0.707357 | 8.4:+72776442 | MS.gene25121:CDS |
| GTAGAACACACACTACTCGG+TGG | 0.713186 | 8.4:-72773629 | None:intergenic |
| ACTGGTGTTAGATTACGCGG+TGG | 0.729692 | 8.4:+72774079 | MS.gene25121:CDS |
| TGAGAAGGGAACTTGCAAGG+TGG | 0.737719 | 8.4:-72776359 | None:intergenic |
| TTATCAATCTCTGCACACTG+TGG | 0.751179 | 8.4:+72776112 | MS.gene25121:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTACTTATGATTATATATA+CGG | + | chr8.4:72774539-72774558 | MS.gene25121:CDS | 15.0% |
| !! | TTACTTATGATTATATATAC+GGG | + | chr8.4:72774540-72774559 | MS.gene25121:CDS | 15.0% |
| !!! | AGAATTATGTTCAATATTTT+GGG | + | chr8.4:72776473-72776492 | MS.gene25121:intron | 15.0% |
| !!! | TAGAATTATGTTCAATATTT+TGG | + | chr8.4:72776472-72776491 | MS.gene25121:intron | 15.0% |
| !! | ATAAATAATGAAATGAAAGC+AGG | - | chr8.4:72776524-72776543 | None:intergenic | 20.0% |
| !! | ATTAACTATGATTTCGAATT+AGG | + | chr8.4:72773662-72773681 | MS.gene25121:CDS | 20.0% |
| !!! | TTTAAGATTAAGATGATTGA+TGG | + | chr8.4:72774640-72774659 | MS.gene25121:intron | 20.0% |
| ! | AAACAGGAAACTGTTAAATT+AGG | + | chr8.4:72776622-72776641 | MS.gene25121:intron | 25.0% |
| ! | AAATCATAGTTAATCTGATG+CGG | - | chr8.4:72773656-72773675 | None:intergenic | 25.0% |
| ! | AACAGGAAACTGTTAAATTA+GGG | + | chr8.4:72776623-72776642 | MS.gene25121:intron | 25.0% |
| ! | AATGACAATTCAAATCCATT+AGG | + | chr8.4:72774892-72774911 | MS.gene25121:intron | 25.0% |
| ! | ATGATATCCATGACATTTAT+GGG | + | chr8.4:72775888-72775907 | MS.gene25121:CDS | 25.0% |
| ! | CAAATCTATCATAAAAAGCT+AGG | - | chr8.4:72774940-72774959 | None:intergenic | 25.0% |
| ! | CAACCACAATACAAATTAAT+CGG | - | chr8.4:72775068-72775087 | None:intergenic | 25.0% |
| ! | GAAAACAAGTGTTAAAACAA+AGG | - | chr8.4:72776565-72776584 | None:intergenic | 25.0% |
| ! | TAAATCAGATGATATAGAGA+CGG | - | chr8.4:72776075-72776094 | None:intergenic | 25.0% |
| ! | TAATAACTACAAACATCAAG+AGG | - | chr8.4:72774860-72774879 | None:intergenic | 25.0% |
| ! | TTGTACAGATATTTGAAAAC+AGG | + | chr8.4:72776606-72776625 | MS.gene25121:intron | 25.0% |
| !! | ATTTCTTATCATGTCATTTC+TGG | + | chr8.4:72775597-72775616 | MS.gene25121:CDS | 25.0% |
| !! | TAATTTGGATGATACTTTTG+TGG | + | chr8.4:72774165-72774184 | MS.gene25121:CDS | 25.0% |
| !! | TTATGTGTGTTTGTGATTTT+TGG | + | chr8.4:72774340-72774359 | MS.gene25121:intron | 25.0% |
| !! | TTTGAAGTGTGCAAATAATA+TGG | - | chr8.4:72775818-72775837 | None:intergenic | 25.0% |
| !! | TTTTTGTATTGCTAGTGATT+TGG | + | chr8.4:72775013-72775032 | MS.gene25121:intron | 25.0% |
| !!! | AAACCGATTAATTTGTATTG+TGG | + | chr8.4:72775062-72775081 | MS.gene25121:intron | 25.0% |
| !!! | TTCAATATTTTGGGTTTAGT+TGG | + | chr8.4:72776482-72776501 | MS.gene25121:intron | 25.0% |
| !!! | TTCGGTGTTAATCAATAATT+GGG | + | chr8.4:72774612-72774631 | MS.gene25121:intron | 25.0% |
| !!! | TTGTGAAGAGTTTGTTATTA+AGG | + | chr8.4:72774264-72774283 | MS.gene25121:CDS | 25.0% |
| !!! | TTTCGGTGTTAATCAATAAT+TGG | + | chr8.4:72774611-72774630 | MS.gene25121:intron | 25.0% |
| !!! | TTTTTTATCTCAAACCAAAC+AGG | + | chr8.4:72776678-72776697 | MS.gene25121:intron | 25.0% |
| AACATGCAATGCAAATCAAA+AGG | - | chr8.4:72774674-72774693 | None:intergenic | 30.0% | |
| ACAGGAAACTGTTAAATTAG+GGG | + | chr8.4:72776624-72776643 | MS.gene25121:intron | 30.0% | |
| AGCTTATTGCATAAACCTAA+TGG | - | chr8.4:72774910-72774929 | None:intergenic | 30.0% | |
| ATAATATGGTGCATAATGTC+AGG | - | chr8.4:72775804-72775823 | None:intergenic | 30.0% | |
| ATCAACAACTTCTTAGCATA+AGG | - | chr8.4:72774217-72774236 | None:intergenic | 30.0% | |
| ATTAGGAATAGCTAATTGGA+AGG | + | chr8.4:72775434-72775453 | MS.gene25121:CDS | 30.0% | |
| CTGAATTTCTTCCCTATATT+CGG | - | chr8.4:72776998-72777017 | None:intergenic | 30.0% | |
| GATGATATCCATGACATTTA+TGG | + | chr8.4:72775887-72775906 | MS.gene25121:CDS | 30.0% | |
| GATTATATATACGGGATGTT+TGG | + | chr8.4:72774548-72774567 | MS.gene25121:CDS | 30.0% | |
| TATCATGATTGAGAATGACA+AGG | + | chr8.4:72776442-72776461 | MS.gene25121:CDS | 30.0% | |
| TATGTTATGTGTTTGTCAAG+TGG | + | chr8.4:72774969-72774988 | MS.gene25121:intron | 30.0% | |
| TCAATCATGATAACAAACAC+AGG | - | chr8.4:72776434-72776453 | None:intergenic | 30.0% | |
| TCATTTGTCTACATATTTGC+AGG | + | chr8.4:72775849-72775868 | MS.gene25121:intron | 30.0% | |
| TCCAATTAGCTATTCCTAAT+CGG | - | chr8.4:72775434-72775453 | None:intergenic | 30.0% | |
| TGTTCGAATTTGTACTTCAA+GGG | - | chr8.4:72776159-72776178 | None:intergenic | 30.0% | |
| TGTTTGGATTATGATTCTAC+TGG | + | chr8.4:72774061-72774080 | MS.gene25121:CDS | 30.0% | |
| TTATACACTTCATGAAACCA+AGG | - | chr8.4:72776704-72776723 | None:intergenic | 30.0% | |
| TTGTTCGAATTTGTACTTCA+AGG | - | chr8.4:72776160-72776179 | None:intergenic | 30.0% | |
| !! | CGATTAATTTGTATTGTGGT+TGG | + | chr8.4:72775066-72775085 | MS.gene25121:intron | 30.0% |
| !! | GGATGAGTTGACTTTTAATT+TGG | + | chr8.4:72774150-72774169 | MS.gene25121:CDS | 30.0% |
| !!! | AGTGATTTGGCTTTTTTGTA+TGG | + | chr8.4:72775026-72775045 | MS.gene25121:intron | 30.0% |
| AAGAGCTGTCCTCATTAAAT+TGG | + | chr8.4:72775308-72775327 | MS.gene25121:CDS | 35.0% | |
| ACAACATACCCATTGAACTT+GGG | - | chr8.4:72776019-72776038 | None:intergenic | 35.0% | |
| ACAAGTATCTGACCGAATAT+AGG | + | chr8.4:72776983-72777002 | MS.gene25121:CDS | 35.0% | |
| ACCGATTAGGAATAGCTAAT+TGG | + | chr8.4:72775430-72775449 | MS.gene25121:CDS | 35.0% | |
| ACTATCATTCTGTCTGATTC+TGG | + | chr8.4:72776753-72776772 | MS.gene25121:intron | 35.0% | |
| AGTAAAGATTCCACTTCTGT+TGG | + | chr8.4:72776317-72776336 | MS.gene25121:CDS | 35.0% | |
| ATCGATCAGCCAATTTAATG+AGG | - | chr8.4:72775320-72775339 | None:intergenic | 35.0% | |
| ATGCATTTGCAAGCAGAATT+TGG | + | chr8.4:72776185-72776204 | MS.gene25121:CDS | 35.0% | |
| ATTAGCTATTCCTAATCGGT+TGG | - | chr8.4:72775430-72775449 | None:intergenic | 35.0% | |
| CAAGTATCTGACCGAATATA+GGG | + | chr8.4:72776984-72777003 | MS.gene25121:CDS | 35.0% | |
| CAATCAGGCTTGTAAGAATA+TGG | - | chr8.4:72776398-72776417 | None:intergenic | 35.0% | |
| GCTTCAAGAATCTAACTGAT+TGG | + | chr8.4:72775165-72775184 | MS.gene25121:intron | 35.0% | |
| GGTATGTTGTAGCTCAATAA+TGG | + | chr8.4:72776029-72776048 | MS.gene25121:intron | 35.0% | |
| GTTCGAATTTGTACTTCAAG+GGG | - | chr8.4:72776158-72776177 | None:intergenic | 35.0% | |
| TACAACATACCCATTGAACT+TGG | - | chr8.4:72776020-72776039 | None:intergenic | 35.0% | |
| TATTCTTACAAGCCTGATTG+CGG | + | chr8.4:72776398-72776417 | MS.gene25121:CDS | 35.0% | |
| TCCAAACAATGCTGCAAATA+CGG | - | chr8.4:72774434-72774453 | None:intergenic | 35.0% | |
| TCGAGTTTGCACAAAATTCT+TGG | - | chr8.4:72776795-72776814 | None:intergenic | 35.0% | |
| TTACCTTTCCCTCTTTCATT+TGG | + | chr8.4:72775669-72775688 | MS.gene25121:intron | 35.0% | |
| TTCTTCATATGTGCTTCAGA+TGG | + | chr8.4:72776250-72776269 | MS.gene25121:CDS | 35.0% | |
| TTGCAATTTGGATCACTTAC+AGG | - | chr8.4:72776919-72776938 | None:intergenic | 35.0% | |
| ! | ATTGTGGTTGGCATTTTTGT+AGG | + | chr8.4:72775078-72775097 | MS.gene25121:intron | 35.0% |
| ! | CCAAATTGCAAGTTGAAGAT+GGG | + | chr8.4:72776928-72776947 | MS.gene25121:CDS | 35.0% |
| ! | CTTATCATGTCATTTCTGGA+CGG | + | chr8.4:72775601-72775620 | MS.gene25121:CDS | 35.0% |
| ! | TCCAAATTGCAAGTTGAAGA+TGG | + | chr8.4:72776927-72776946 | MS.gene25121:CDS | 35.0% |
| ! | TGGTGATGAAGATGAATTGA+AGG | + | chr8.4:72773826-72773845 | MS.gene25121:CDS | 35.0% |
| ! | TTGGATGATACTTTTGTGGA+GGG | + | chr8.4:72774169-72774188 | MS.gene25121:CDS | 35.0% |
| ! | TTTGGAGATTTTTGCACCTT+TGG | + | chr8.4:72775404-72775423 | MS.gene25121:CDS | 35.0% |
| ! | TTTGGATGATACTTTTGTGG+AGG | + | chr8.4:72774168-72774187 | MS.gene25121:CDS | 35.0% |
| !! | ACTGATTGGTATGCTATTTC+AGG | + | chr8.4:72775179-72775198 | MS.gene25121:intron | 35.0% |
| !! | AGTACTAGATTTGTTGGAGA+GGG | + | chr8.4:72776816-72776835 | MS.gene25121:CDS | 35.0% |
| !! | AGTTGCTGATTTAGTTGAAG+GGG | + | chr8.4:72774577-72774596 | MS.gene25121:CDS | 35.0% |
| !! | GAGTTGCTGATTTAGTTGAA+GGG | + | chr8.4:72774576-72774595 | MS.gene25121:CDS | 35.0% |
| !!! | AAGGGGTGAGGAATTTTTTT+CGG | + | chr8.4:72774594-72774613 | MS.gene25121:intron | 35.0% |
| AAAGCTCTTTGTGCTGTACA+GGG | - | chr8.4:72775494-72775513 | None:intergenic | 40.0% | |
| AACATATAGGTTCCCTCTGA+AGG | + | chr8.4:72776864-72776883 | MS.gene25121:CDS | 40.0% | |
| AAGCCTTAGAAGTTGTTCAC+CGG | + | chr8.4:72775948-72775967 | MS.gene25121:CDS | 40.0% | |
| AATTCAACAGTAGTTGCTGC+TGG | + | chr8.4:72774485-72774504 | MS.gene25121:CDS | 40.0% | |
| AATTTGGATTCGCTGCTCAT+TGG | + | chr8.4:72776201-72776220 | MS.gene25121:CDS | 40.0% | |
| AGCTTTCTCAGCTTCACAAA+AGG | - | chr8.4:72774290-72774309 | None:intergenic | 40.0% | |
| AGTGACCATCCAAATGAAAG+AGG | - | chr8.4:72775681-72775700 | None:intergenic | 40.0% | |
| ATACATTGCCCCAAGTTCAA+TGG | + | chr8.4:72776007-72776026 | MS.gene25121:CDS | 40.0% | |
| ATCGACAAATCCAACAGAAG+TGG | - | chr8.4:72776330-72776349 | None:intergenic | 40.0% | |
| ATGCTACTACTACACGAAAC+AGG | - | chr8.4:72773944-72773963 | None:intergenic | 40.0% | |
| ATGTCTTCCACCAATTGTTC+GGG | + | chr8.4:72774779-72774798 | MS.gene25121:intron | 40.0% | |
| ATTCAACAGTAGTTGCTGCT+GGG | + | chr8.4:72774486-72774505 | MS.gene25121:CDS | 40.0% | |
| ATTCAGCGAATGTATGATCG+CGG | + | chr8.4:72777012-72777031 | MS.gene25121:CDS | 40.0% | |
| ATTCTTACAAGCCTGATTGC+GGG | + | chr8.4:72776399-72776418 | MS.gene25121:CDS | 40.0% | |
| CAACATACCCATTGAACTTG+GGG | - | chr8.4:72776018-72776037 | None:intergenic | 40.0% | |
| CATCCAAATGAAAGAGGGAA+AGG | - | chr8.4:72775675-72775694 | None:intergenic | 40.0% | |
| CCCATCTTCAACTTGCAATT+TGG | - | chr8.4:72776931-72776950 | None:intergenic | 40.0% | |
| CTCGACAGTACTAGATTTGT+TGG | + | chr8.4:72776810-72776829 | MS.gene25121:CDS | 40.0% | |
| CTTTCCCTCTTTCATTTGGA+TGG | + | chr8.4:72775673-72775692 | MS.gene25121:intron | 40.0% | |
| GACAGTTATCAGCATGAGAA+GGG | - | chr8.4:72776376-72776395 | None:intergenic | 40.0% | |
| GAGAGATCATAGTCCAGTTT+CGG | + | chr8.4:72773907-72773926 | MS.gene25121:CDS | 40.0% | |
| GAGGTTTGCAAAGGAAACTT+TGG | + | chr8.4:72775386-72775405 | MS.gene25121:CDS | 40.0% | |
| GATGACACTAGATGCATTAC+CGG | + | chr8.4:72775350-72775369 | MS.gene25121:CDS | 40.0% | |
| GATGTCTTCCACCAATTGTT+CGG | + | chr8.4:72774778-72774797 | MS.gene25121:intron | 40.0% | |
| GCATACAATGTTCCTTGCAA+TGG | + | chr8.4:72775278-72775297 | MS.gene25121:CDS | 40.0% | |
| GTGACCATCCAAATGAAAGA+GGG | - | chr8.4:72775680-72775699 | None:intergenic | 40.0% | |
| GTTTCGTGTAGTAGTAGCAT+GGG | + | chr8.4:72773944-72773963 | MS.gene25121:CDS | 40.0% | |
| TAACCGGTGAACAACTTCTA+AGG | - | chr8.4:72775954-72775973 | None:intergenic | 40.0% | |
| TACATTGCCCCAAGTTCAAT+GGG | + | chr8.4:72776008-72776027 | MS.gene25121:CDS | 40.0% | |
| TATTCGGTCAGATACTTGTC+AGG | - | chr8.4:72776982-72777001 | None:intergenic | 40.0% | |
| TCCGTATTTGCAGCATTGTT+TGG | + | chr8.4:72774430-72774449 | MS.gene25121:CDS | 40.0% | |
| TGTTTCGTGTAGTAGTAGCA+TGG | + | chr8.4:72773943-72773962 | MS.gene25121:CDS | 40.0% | |
| TTATCAATCTCTGCACACTG+TGG | + | chr8.4:72776112-72776131 | MS.gene25121:CDS | 40.0% | |
| TTGCAAGGAACATTGTATGC+AGG | - | chr8.4:72775278-72775297 | None:intergenic | 40.0% | |
| TTTGGAAACTGCTGTGTTGT+TGG | + | chr8.4:72774448-72774467 | MS.gene25121:CDS | 40.0% | |
| ! | GCTGTAGGTTGACAACATAT+AGG | + | chr8.4:72776851-72776870 | MS.gene25121:CDS | 40.0% |
| ! | TAGAAGTTGTTCACCGGTTA+TGG | + | chr8.4:72775954-72775973 | MS.gene25121:CDS | 40.0% |
| ! | TCATTTTCACCGACGAAGTT+TGG | + | chr8.4:72773872-72773891 | MS.gene25121:CDS | 40.0% |
| ! | TCTACTGGTGTTAGATTACG+CGG | + | chr8.4:72774076-72774095 | MS.gene25121:CDS | 40.0% |
| ! | TGCTTTGGGTTCTTCTTGTT+TGG | + | chr8.4:72774045-72774064 | MS.gene25121:CDS | 40.0% |
| !! | CAGTACTAGATTTGTTGGAG+AGG | + | chr8.4:72776815-72776834 | MS.gene25121:CDS | 40.0% |
| !! | GGAGTTGCTGATTTAGTTGA+AGG | + | chr8.4:72774575-72774594 | MS.gene25121:CDS | 40.0% |
| !! | GTGTTTGTTTTCATCTCCGA+CGG | + | chr8.4:72773760-72773779 | MS.gene25121:CDS | 40.0% |
| AATTGTTCGGGGTACATCTC+TGG | + | chr8.4:72774791-72774810 | MS.gene25121:intron | 45.0% | |
| ACAGGCTTGTGATTCAGTCT+TGG | - | chr8.4:72776901-72776920 | None:intergenic | 45.0% | |
| ACTGAGTCACTTAAGCAAGC+TGG | + | chr8.4:72775209-72775228 | MS.gene25121:CDS | 45.0% | |
| AGAGATGTACCCCGAACAAT+TGG | - | chr8.4:72774792-72774811 | None:intergenic | 45.0% | |
| AGAGCTTTCGTCAAAGCTTG+TGG | + | chr8.4:72775506-72775525 | MS.gene25121:CDS | 45.0% | |
| AGATACTTGTCAGGTATGGC+TGG | - | chr8.4:72776973-72776992 | None:intergenic | 45.0% | |
| AGGATCTAGATCTTCGTCAC+CGG | + | chr8.4:72773682-72773701 | MS.gene25121:CDS | 45.0% | |
| ATCTCAAACCAAACAGGCCT+TGG | + | chr8.4:72776684-72776703 | MS.gene25121:intron | 45.0% | |
| ATGTGCTTCAGATGGTTGAG+TGG | + | chr8.4:72776258-72776277 | MS.gene25121:CDS | 45.0% | |
| CAAGATCCACCAAACTTCGT+CGG | - | chr8.4:72773884-72773903 | None:intergenic | 45.0% | |
| CAAGGAACATTGTATGCAGG+CGG | - | chr8.4:72775275-72775294 | None:intergenic | 45.0% | |
| CCGGAAAAACTCGAACCAAA+CGG | - | chr8.4:72773800-72773819 | None:intergenic | 45.0% | |
| CTGATTTAGTTGAAGGGGTG+AGG | + | chr8.4:72774582-72774601 | MS.gene25121:intron | 45.0% | |
| GAAAGCTCTTTGTGCTGTAC+AGG | - | chr8.4:72775495-72775514 | None:intergenic | 45.0% | |
| GAAGCTGAGAAAGCTCATAG+AGG | + | chr8.4:72774295-72774314 | MS.gene25121:CDS | 45.0% | |
| GAGCAAGCACTCAAAGATGA+AGG | + | chr8.4:72775573-72775592 | MS.gene25121:CDS | 45.0% | |
| GCCTCAATTCTTCCTTCAGA+GGG | - | chr8.4:72776879-72776898 | None:intergenic | 45.0% | |
| GCTGCGCTTGATTGTTGATA+AGG | + | chr8.4:72775910-72775929 | MS.gene25121:CDS | 45.0% | |
| GGACACTGAAAAACCGAAAC+TGG | - | chr8.4:72773923-72773942 | None:intergenic | 45.0% | |
| GGACAGTTATCAGCATGAGA+AGG | - | chr8.4:72776377-72776396 | None:intergenic | 45.0% | |
| GGGCTAACTGTATCAAGCAT+GGG | + | chr8.4:72777033-72777052 | MS.gene25121:CDS | 45.0% | |
| GGTCAGATACTTGTCAGGTA+TGG | - | chr8.4:72776977-72776996 | None:intergenic | 45.0% | |
| GGTGTAGAACACACACTACT+CGG | - | chr8.4:72773635-72773654 | None:intergenic | 45.0% | |
| GTACCGGAACAATTCGATCA+GGG | + | chr8.4:72773978-72773997 | MS.gene25121:CDS | 45.0% | |
| TCATGAAACCAAGGCCTGTT+TGG | - | chr8.4:72776695-72776714 | None:intergenic | 45.0% | |
| TGAGAAAGCTCATAGAGGAC+AGG | + | chr8.4:72774300-72774319 | MS.gene25121:CDS | 45.0% | |
| TGTCTTCCACCAATTGTTCG+GGG | + | chr8.4:72774780-72774799 | MS.gene25121:intron | 45.0% | |
| TGTGCTTCAGATGGTTGAGT+GGG | + | chr8.4:72776259-72776278 | MS.gene25121:CDS | 45.0% | |
| TGTTTGTAGATGCGAGCTAG+TGG | + | chr8.4:72774404-72774423 | MS.gene25121:intron | 45.0% | |
| TTCAGCGAATGTATGATCGC+GGG | + | chr8.4:72777013-72777032 | MS.gene25121:CDS | 45.0% | |
| ! | ACTTTTGTGGAGGGTTGTGT+TGG | + | chr8.4:72774178-72774197 | MS.gene25121:CDS | 45.0% |
| ! | ATATACGGGATGTTTGGAGC+TGG | + | chr8.4:72774554-72774573 | MS.gene25121:CDS | 45.0% |
| ! | ATTCCTAATCGGTTGGCCAA+AGG | - | chr8.4:72775423-72775442 | None:intergenic | 45.0% |
| ! | GCGCTTGATTGTTGATAAGG+AGG | + | chr8.4:72775913-72775932 | MS.gene25121:CDS | 45.0% |
| ! | TCCCTCTGAAGGAAGAATTG+AGG | + | chr8.4:72776875-72776894 | MS.gene25121:CDS | 45.0% |
| ! | TTTTCACCGACGAAGTTTGG+TGG | + | chr8.4:72773875-72773894 | MS.gene25121:CDS | 45.0% |
| !! | CCGTTTGGTTCGAGTTTTTC+CGG | + | chr8.4:72773797-72773816 | MS.gene25121:CDS | 45.0% |
| !! | CTAGATTTGTTGGAGAGGGT+CGG | + | chr8.4:72776820-72776839 | MS.gene25121:CDS | 45.0% |
| !! | GCTGTGTTGTTGGCTTTGAT+CGG | + | chr8.4:72774458-72774477 | MS.gene25121:CDS | 45.0% |
| !! | GGGTTTGTGAGAAGTGCTTT+GGG | + | chr8.4:72774031-72774050 | MS.gene25121:CDS | 45.0% |
| !! | GGTGAATTTGATGGTGTTGG+TGG | + | chr8.4:72774112-72774131 | MS.gene25121:CDS | 45.0% |
| !! | GGTGGTGAATTTGATGGTGT+TGG | + | chr8.4:72774109-72774128 | MS.gene25121:CDS | 45.0% |
| !! | TAGATTTGTTGGAGAGGGTC+GGG | + | chr8.4:72776821-72776840 | MS.gene25121:CDS | 45.0% |
| !! | TGGGTTTGTGAGAAGTGCTT+TGG | + | chr8.4:72774030-72774049 | MS.gene25121:CDS | 45.0% |
| !! | TGGTGGTGATTCTGGAATTG+TGG | + | chr8.4:72774129-72774148 | MS.gene25121:CDS | 45.0% |
| !! | TTTGGTTCGAGTTTTTCCGG+TGG | + | chr8.4:72773800-72773819 | MS.gene25121:CDS | 45.0% |
| !! | TTTGTTTTCATCTCCGACGG+TGG | + | chr8.4:72773763-72773782 | MS.gene25121:CDS | 45.0% |
| !!! | ACTGGTGGTGGGTTTTTTGA+TGG | + | chr8.4:72774010-72774029 | MS.gene25121:CDS | 45.0% |
| !!! | CTGGTGGTGGGTTTTTTGAT+GGG | + | chr8.4:72774011-72774030 | MS.gene25121:CDS | 45.0% |
| AGCGCAGCCCATAAATGTCA+TGG | - | chr8.4:72775898-72775917 | None:intergenic | 50.0% | |
| ATCTCTGCACACTGTGGTGA+TGG | + | chr8.4:72776118-72776137 | MS.gene25121:CDS | 50.0% | |
| ATCTTCATCACCACCACCAC+CGG | - | chr8.4:72773819-72773838 | None:intergenic | 50.0% | |
| CAAGCAGCAGAGGTTTGCAA+AGG | + | chr8.4:72775377-72775396 | MS.gene25121:CDS | 50.0% | |
| CATGCACCTCAGACCATAAC+CGG | - | chr8.4:72775970-72775989 | None:intergenic | 50.0% | |
| CCTCCCTGATCGAATTGTTC+CGG | - | chr8.4:72773984-72774003 | None:intergenic | 50.0% | |
| CGGAACAATTCGATCAGGGA+GGG | + | chr8.4:72773982-72774001 | MS.gene25121:CDS | 50.0% | |
| CGGGCTAACTGTATCAAGCA+TGG | + | chr8.4:72777032-72777051 | MS.gene25121:CDS | 50.0% | |
| CTCTTGCATCTGCCATTGCA+AGG | - | chr8.4:72775293-72775312 | None:intergenic | 50.0% | |
| CTTTGCAAACCTCTGCTGCT+TGG | - | chr8.4:72775379-72775398 | None:intergenic | 50.0% | |
| GATGTACCCCGAACAATTGG+TGG | - | chr8.4:72774789-72774808 | None:intergenic | 50.0% | |
| GCATGAGAAGGGAACTTGCA+AGG | - | chr8.4:72776365-72776384 | None:intergenic | 50.0% | |
| GGAACAATTCGATCAGGGAG+GGG | + | chr8.4:72773983-72774002 | MS.gene25121:CDS | 50.0% | |
| GGCCTCAATTCTTCCTTCAG+AGG | - | chr8.4:72776880-72776899 | None:intergenic | 50.0% | |
| GTAGAACACACACTACTCGG+TGG | - | chr8.4:72773632-72773651 | None:intergenic | 50.0% | |
| GTGGTGAAGCATGTTCCGTT+TGG | + | chr8.4:72773782-72773801 | MS.gene25121:CDS | 50.0% | |
| TACTGCTACTGCAAGCAGCA+TGG | + | chr8.4:72777059-72777078 | MS.gene25121:CDS | 50.0% | |
| TCTCTGCACACTGTGGTGAT+GGG | + | chr8.4:72776119-72776138 | MS.gene25121:CDS | 50.0% | |
| TGAGAAGGGAACTTGCAAGG+TGG | - | chr8.4:72776362-72776381 | None:intergenic | 50.0% | |
| TGTAGTAGTAGCATGGGTGC+CGG | + | chr8.4:72773950-72773969 | MS.gene25121:CDS | 50.0% | |
| TTGGATTCGCTGCTCATTGG+AGG | + | chr8.4:72776204-72776223 | MS.gene25121:CDS | 50.0% | |
| ! | ACTGGTGTTAGATTACGCGG+TGG | + | chr8.4:72774079-72774098 | MS.gene25121:CDS | 50.0% |
| ! | CGACGAAGTTTGGTGGATCT+TGG | + | chr8.4:72773882-72773901 | MS.gene25121:CDS | 50.0% |
| ! | GGTACCGGAACAATTCGATC+AGG | + | chr8.4:72773977-72773996 | MS.gene25121:CDS | 50.0% |
| ! | GGTTATGGTCTGAGGTGCAT+GGG | + | chr8.4:72775969-72775988 | MS.gene25121:CDS | 50.0% |
| ! | TGTTCACCGGTTATGGTCTG+AGG | + | chr8.4:72775961-72775980 | MS.gene25121:CDS | 50.0% |
| !! | GATGGTGTTGGTGGTGATTC+TGG | + | chr8.4:72774121-72774140 | MS.gene25121:CDS | 50.0% |
| !! | GGTGGTGGTGGTGAATTTGA+TGG | + | chr8.4:72774103-72774122 | MS.gene25121:CDS | 50.0% |
| AATTGTTCCGGTACCCGCAC+CGG | - | chr8.4:72773972-72773991 | None:intergenic | 55.0% | |
| ACTCATTGCTTCGCACTGCC+AGG | - | chr8.4:72776300-72776319 | None:intergenic | 55.0% | |
| CCGGAACAATTCGATCAGGG+AGG | + | chr8.4:72773981-72774000 | MS.gene25121:CDS | 55.0% | |
| GCACCTTTGGCCAACCGATT+AGG | + | chr8.4:72775417-72775436 | MS.gene25121:CDS | 55.0% | |
| GCTACTGCAAGCAGCATGGT+TGG | + | chr8.4:72777063-72777082 | MS.gene25121:CDS | 55.0% | |
| GGAACATGCTTCACCACCGT+CGG | - | chr8.4:72773779-72773798 | None:intergenic | 55.0% | |
| GGTGTTAGATTACGCGGTGG+TGG | + | chr8.4:72774082-72774101 | MS.gene25121:CDS | 55.0% | |
| TTACAAGCCTGATTGCGGGC+AGG | + | chr8.4:72776403-72776422 | MS.gene25121:CDS | 55.0% | |
| ! | AACCTCTGCTGCTTGGCAAC+CGG | - | chr8.4:72775372-72775391 | None:intergenic | 55.0% |
| ! | AGATGGTTGAGTGGGCTCGA+TGG | + | chr8.4:72776267-72776286 | MS.gene25121:CDS | 55.0% |
| ! | CGCTGCTCATTGGAGGTACA+AGG | + | chr8.4:72776211-72776230 | MS.gene25121:CDS | 55.0% |
| ! | CGGTTATGGTCTGAGGTGCA+TGG | + | chr8.4:72775968-72775987 | MS.gene25121:CDS | 55.0% |
| ! | GATGGTTGAGTGGGCTCGAT+GGG | + | chr8.4:72776268-72776287 | MS.gene25121:CDS | 55.0% |
| ! | GTTAGATTACGCGGTGGTGG+TGG | + | chr8.4:72774085-72774104 | MS.gene25121:CDS | 55.0% |
| !! | CACACTGTGGTGATGGGTGA+AGG | + | chr8.4:72776125-72776144 | MS.gene25121:CDS | 55.0% |
| !! | GGTTCGAGTTTTTCCGGTGG+TGG | + | chr8.4:72773803-72773822 | MS.gene25121:CDS | 55.0% |
| !! | TCGAGTTTTTCCGGTGGTGG+TGG | + | chr8.4:72773806-72773825 | MS.gene25121:CDS | 55.0% |
| !! | TGTGGTGATGGGTGAAGGCA+AGG | + | chr8.4:72776130-72776149 | MS.gene25121:CDS | 55.0% |
| AAGCCTGATTGCGGGCAGGA+TGG | + | chr8.4:72776407-72776426 | MS.gene25121:CDS | 60.0% | |
| ACGTCGGGGAAATCGGTGAC+GGG | + | chr8.4:72773728-72773747 | MS.gene25121:CDS | 60.0% | |
| CACGTCGGGGAAATCGGTGA+CGG | + | chr8.4:72773727-72773746 | MS.gene25121:CDS | 60.0% | |
| ! | ATCTTCGTCACCGGCGTCGA+CGG | + | chr8.4:72773691-72773710 | MS.gene25121:CDS | 60.0% |
| ! | CGATCAGGGAGGGGAAGTAC+TGG | + | chr8.4:72773992-72774011 | MS.gene25121:CDS | 60.0% |
| ! | TACCGGTTGCCAAGCAGCAG+AGG | + | chr8.4:72775367-72775386 | MS.gene25121:CDS | 60.0% |
| !! | AGATTACGCGGTGGTGGTGG+TGG | + | chr8.4:72774088-72774107 | MS.gene25121:CDS | 60.0% |
| !! | GGAGGGGAAGTACTGGTGGT+GGG | + | chr8.4:72773999-72774018 | MS.gene25121:CDS | 60.0% |
| !! | TAGTAGCATGGGTGCCGGTG+CGG | + | chr8.4:72773955-72773974 | MS.gene25121:CDS | 60.0% |
| !! | TCAGGGAGGGGAAGTACTGG+TGG | + | chr8.4:72773995-72774014 | MS.gene25121:CDS | 60.0% |
| GGCGTCCACGTCGGGGAAAT+CGG | + | chr8.4:72773721-72773740 | MS.gene25121:CDS | 65.0% | |
| GGTCCATCCTGCCCGCAATC+AGG | - | chr8.4:72776413-72776432 | None:intergenic | 65.0% | |
| !! | AGTAGCATGGGTGCCGGTGC+GGG | + | chr8.4:72773956-72773975 | MS.gene25121:CDS | 65.0% |
| !! | CGTCACCGATTTCCCCGACG+TGG | - | chr8.4:72773729-72773748 | None:intergenic | 65.0% |
| !! | GGGAGGGGAAGTACTGGTGG+TGG | + | chr8.4:72773998-72774017 | MS.gene25121:CDS | 65.0% |
| !! | GGGCTCGATGGGTTGTCACC+TGG | + | chr8.4:72776279-72776298 | MS.gene25121:CDS | 65.0% |
| !! | TCGGGGAAATCGGTGACGGG+TGG | + | chr8.4:72773731-72773750 | MS.gene25121:CDS | 65.0% |
| !! | TTACGCGGTGGTGGTGGTGG+TGG | + | chr8.4:72774091-72774110 | MS.gene25121:CDS | 65.0% |
| GGGTCGGGCGAGCAAGCTGT+AGG | + | chr8.4:72776836-72776855 | MS.gene25121:CDS | 70.0% | |
| !! | ATGGGTGCCGGTGCGGGTAC+CGG | + | chr8.4:72773962-72773981 | MS.gene25121:CDS | 70.0% |
| !! | GTCACCGGCGTCGACGGCGA+CGG | + | chr8.4:72773697-72773716 | MS.gene25121:CDS | 75.0% |
| ! | CGACGGCGGCGTCCACGTCG+GGG | + | chr8.4:72773714-72773733 | MS.gene25121:CDS | 80.0% |
| ! | GCGACGGCGGCGTCCACGTC+GGG | + | chr8.4:72773713-72773732 | MS.gene25121:CDS | 80.0% |
| ! | GGCGACGGCGGCGTCCACGT+CGG | + | chr8.4:72773712-72773731 | MS.gene25121:CDS | 80.0% |
| !!! | ACCGGCGTCGACGGCGACGG+CGG | + | chr8.4:72773700-72773719 | MS.gene25121:CDS | 80.0% |
| ! | GCCGCCGTCGCCGTCGACGC+CGG | - | chr8.4:72773704-72773723 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72773596 | 72777095 | 72773596 | ID=MS.gene25121 |
| chr8.4 | mRNA | 72773596 | 72777095 | 72773596 | ID=MS.gene25121.t1;Parent=MS.gene25121 |
| chr8.4 | exon | 72773596 | 72774321 | 72773596 | ID=MS.gene25121.t1.exon1;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72773596 | 72774321 | 72773596 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| chr8.4 | exon | 72774413 | 72774598 | 72774413 | ID=MS.gene25121.t1.exon2;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72774413 | 72774598 | 72774413 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| chr8.4 | exon | 72775201 | 72775661 | 72775201 | ID=MS.gene25121.t1.exon3;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72775201 | 72775661 | 72775201 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| chr8.4 | exon | 72775871 | 72776029 | 72775871 | ID=MS.gene25121.t1.exon4;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72775871 | 72776029 | 72775871 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| chr8.4 | exon | 72776112 | 72776463 | 72776112 | ID=MS.gene25121.t1.exon5;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72776112 | 72776463 | 72776112 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| chr8.4 | exon | 72776784 | 72777095 | 72776784 | ID=MS.gene25121.t1.exon6;Parent=MS.gene25121.t1 |
| chr8.4 | CDS | 72776784 | 72777095 | 72776784 | ID=cds.MS.gene25121.t1;Parent=MS.gene25121.t1 |
| Gene Sequence |
| Protein sequence |
