Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29515.t1 | XP_003616470.1 | 96.6 | 621 | 19 | 1 | 1 | 619 | 1 | 621 | 0.00E+00 | 1168.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29515.t1 | G7KGV1 | 96.6 | 621 | 19 | 1 | 1 | 619 | 1 | 621 | 0.0e+00 | 1168.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene29515 | 0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene049297 | MS.gene29515 | 0.837856 | 4.06E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene29515 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene29515 | 0.814705 | 1.34E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene29515 | 0.804061 | 2.59E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene29515 | 0.872023 | 4.37E-67 | -1.69E-46 |
| MS.gene050301 | MS.gene29515 | 0.830051 | 3.65E-55 | -1.69E-46 |
| MS.gene050335 | MS.gene29515 | -0.813161 | 2.94E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene29515 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene29515 | 0.826134 | 3.21E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene29515 | 0.812849 | 3.45E-51 | -1.69E-46 |
| MS.gene051171 | MS.gene29515 | 0.821434 | 4.05E-53 | -1.69E-46 |
| MS.gene051240 | MS.gene29515 | 0.868464 | 6.41E-66 | -1.69E-46 |
| MS.gene051242 | MS.gene29515 | 0.858329 | 8.88E-63 | -1.69E-46 |
| MS.gene051662 | MS.gene29515 | 0.833317 | 5.72E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene29515 | 0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene29515 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene29515 | 0.823247 | 1.53E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene29515 | 0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene29515 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene29515 | 0.804176 | 2.45E-49 | -1.69E-46 |
| MS.gene052344 | MS.gene29515 | -0.813325 | 2.71E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene29515 | 0.852405 | 4.72E-61 | -1.69E-46 |
| MS.gene053557 | MS.gene29515 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene29515 | 0.850557 | 1.57E-60 | -1.69E-46 |
| MS.gene053907 | MS.gene29515 | 0.811695 | 6.16E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene29515 | 0.84969 | 2.75E-60 | -1.69E-46 |
| MS.gene054473 | MS.gene29515 | 0.820215 | 7.72E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene29515 | 0.818743 | 1.67E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene29515 | 0.830527 | 2.79E-55 | -1.69E-46 |
| MS.gene054983 | MS.gene29515 | 0.805575 | 1.25E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene29515 | 0.82216 | 2.75E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene29515 | 0.837327 | 5.55E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene29515 | 0.829818 | 4.16E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene29515 | 0.857767 | 1.30E-62 | -1.69E-46 |
| MS.gene055971 | MS.gene29515 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene29515 | 0.812983 | 3.22E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene29515 | 0.825021 | 5.88E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene29515 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene057121 | MS.gene29515 | 0.861504 | 9.80E-64 | -1.69E-46 |
| MS.gene057439 | MS.gene29515 | 0.8237 | 1.20E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene29515 | 0.874498 | 6.44E-68 | -1.69E-46 |
| MS.gene05811 | MS.gene29515 | 0.889346 | 2.63E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene29515 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene058276 | MS.gene29515 | 0.819239 | 1.29E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene29515 | 0.822866 | 1.88E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene29515 | 0.843028 | 1.80E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene29515 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene29515 | 0.843914 | 1.05E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene29515 | 0.861491 | 9.88E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene29515 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene29515 | 0.860347 | 2.20E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene29515 | 0.836717 | 7.94E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene29515 | 0.843116 | 1.71E-58 | -1.69E-46 |
| MS.gene060476 | MS.gene29515 | 0.817201 | 3.73E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene29515 | 0.821281 | 4.39E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29515.t1 | MTR_5g080700 | 97.585 | 621 | 13 | 2 | 1 | 619 | 1 | 621 | 0.0 | 1244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29515.t1 | AT3G14900 | 58.587 | 623 | 221 | 13 | 13 | 619 | 10 | 611 | 0.0 | 657 |
Find 143 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGAAACCTGATAGTGAATT+TGG | 0.130783 | 5.3:-65045408 | MS.gene29515:CDS |
| AATTTATTGTAAGGTGAAAA+TGG | 0.160932 | 5.3:+65045519 | None:intergenic |
| CACTATCAGGTTTCGTGTTT+CGG | 0.165811 | 5.3:+65045415 | None:intergenic |
| TTTAACTAGGCATGCAATTT+TGG | 0.167182 | 5.3:-65043756 | MS.gene29515:CDS |
| GTAAGGTGAAAATGGGTTTA+AGG | 0.168800 | 5.3:+65045527 | None:intergenic |
| TCTGAAATGGCTGCTGATTT+TGG | 0.188371 | 5.3:-65044922 | MS.gene29515:CDS |
| GCAAGAATTCAGTTGTAAAA+TGG | 0.193149 | 5.3:+65045556 | None:intergenic |
| GCCTTCCACTCTTTAGTATA+TGG | 0.205230 | 5.3:+65044376 | None:intergenic |
| TGATCGAATGGTGAGGTTTA+TGG | 0.229882 | 5.3:-65045121 | MS.gene29515:CDS |
| TTGAAATTTGATTAGGGTTT+GGG | 0.238914 | 5.3:+65045470 | None:intergenic |
| AAAATGTTTGGAGTTTCTTT+TGG | 0.250294 | 5.3:-65044425 | MS.gene29515:CDS |
| TGGTATAAGTATGGTGAATA+TGG | 0.271027 | 5.3:-65045063 | MS.gene29515:CDS |
| TGTGGGGTTGAAATTTGATT+AGG | 0.275563 | 5.3:+65045463 | None:intergenic |
| GTGTGTAGTAGAAGAGATTT+TGG | 0.277398 | 5.3:-65045363 | MS.gene29515:CDS |
| ACGGGTGGTGCGTCGTCTTC+TGG | 0.288444 | 5.3:-65045315 | MS.gene29515:CDS |
| ACTATCAGGTTTCGTGTTTC+GGG | 0.289290 | 5.3:+65045416 | None:intergenic |
| AGAAGGATGATCCGAATTTA+AGG | 0.298146 | 5.3:-65045098 | MS.gene29515:CDS |
| CCAACATACTTCCACTCTTC+TGG | 0.303196 | 5.3:+65043887 | None:intergenic |
| AAAATCCCAAATTCACTATC+AGG | 0.308274 | 5.3:+65045402 | None:intergenic |
| GTGGGGTTGAAATTTGATTA+GGG | 0.314782 | 5.3:+65045464 | None:intergenic |
| GTGAATATGGGCCGTATTCT+TGG | 0.329544 | 5.3:-65045050 | MS.gene29515:CDS |
| TGCAGAAGCAATAGAAAATA+TGG | 0.352722 | 5.3:-65044041 | MS.gene29515:CDS |
| GAAAATGGGTTTAAGGTTCT+AGG | 0.356727 | 5.3:+65045534 | None:intergenic |
| CGCTTGACATACACAATATC+AGG | 0.359861 | 5.3:+65044679 | None:intergenic |
| GTTGAGACGTGTACTTATTA+TGG | 0.361515 | 5.3:-65044538 | MS.gene29515:CDS |
| CCGTATGATTGGTATAAGTA+TGG | 0.362102 | 5.3:-65045072 | MS.gene29515:CDS |
| ATTTATTGTAAGGTGAAAAT+GGG | 0.378152 | 5.3:+65045520 | None:intergenic |
| ATTAGATAAGTGGACTTTGA+TGG | 0.391474 | 5.3:-65044758 | MS.gene29515:CDS |
| GTTGAAATTTGATTAGGGTT+TGG | 0.396176 | 5.3:+65045469 | None:intergenic |
| CAGAAGAGTGGAAGTATGTT+GGG | 0.397642 | 5.3:-65043886 | MS.gene29515:CDS |
| CAAGAATTCAGTTGTAAAAT+GGG | 0.397794 | 5.3:+65045557 | None:intergenic |
| ATTTAAGGCATCCGTATGAT+TGG | 0.406925 | 5.3:-65045083 | MS.gene29515:CDS |
| AGAGATGGAGGAGGAGGATG+AGG | 0.409186 | 5.3:-65044194 | MS.gene29515:CDS |
| CGAAACCTGATAGTGAATTT+GGG | 0.410945 | 5.3:-65045407 | MS.gene29515:CDS |
| GCCGGTTAGTGGTGGGATTA+CGG | 0.412984 | 5.3:-65045007 | MS.gene29515:CDS |
| TCTTGGCGTGGGATTGTTGT+TGG | 0.413217 | 5.3:-65045033 | MS.gene29515:CDS |
| TCCGTAATCCCACCACTAAC+CGG | 0.420970 | 5.3:+65045006 | None:intergenic |
| GCATCCAAAGTGGAGAGTTT+CGG | 0.425817 | 5.3:-65044842 | MS.gene29515:CDS |
| TTGTTGCAGCAGATTGGTCT+TGG | 0.435120 | 5.3:-65045147 | MS.gene29515:CDS |
| ATGATACTGAGATTATAGAT+TGG | 0.435364 | 5.3:-65044285 | MS.gene29515:CDS |
| TAAAGAGTGGAAGGCTAAGT+TGG | 0.439895 | 5.3:-65044368 | MS.gene29515:CDS |
| CAAATGATGACAGCGGAGGC+AGG | 0.454068 | 5.3:-65043977 | MS.gene29515:CDS |
| TGATCAAGAGATGGAGGAGG+AGG | 0.454475 | 5.3:-65044200 | MS.gene29515:CDS |
| GTTGTTGGTGAGCCGGTTAG+TGG | 0.456995 | 5.3:-65045018 | MS.gene29515:CDS |
| ATATCATCATCTTCTTCATC+AGG | 0.457422 | 5.3:+65044319 | None:intergenic |
| GCCCTTCACATCTTCTTCCA+TGG | 0.464519 | 5.3:+65044093 | None:intergenic |
| TCATACGGATGCCTTAAATT+CGG | 0.467531 | 5.3:+65045087 | None:intergenic |
| ACAATCCCACGCCAAGAATA+CGG | 0.469604 | 5.3:+65045039 | None:intergenic |
| GTCGTCTTCTGGTGGTAGAT+TGG | 0.474291 | 5.3:-65045304 | MS.gene29515:CDS |
| GGAGATTGAGAAATCTGAAA+TGG | 0.474478 | 5.3:-65044935 | MS.gene29515:CDS |
| AGTTGGATCAAACTAAGTTA+AGG | 0.475032 | 5.3:-65044885 | MS.gene29515:CDS |
| CCATGTCCGTAACTAGATCT+TGG | 0.475522 | 5.3:+65044143 | None:intergenic |
| GGATAATTCCCACGTCCCCT+AGG | 0.481600 | 5.3:+65045189 | None:intergenic |
| GAAGAAGATGATGATATTGT+TGG | 0.488496 | 5.3:-65044313 | MS.gene29515:CDS |
| AAGATTTGAAGTTGTTTCGT+TGG | 0.489011 | 5.3:-65045439 | MS.gene29515:CDS |
| GAAGGCTAAGTTGGAAGAGA+TGG | 0.489094 | 5.3:-65044359 | MS.gene29515:CDS |
| TCACATCTTCTTCCATGGCA+TGG | 0.491608 | 5.3:+65044098 | None:intergenic |
| GAGGATTTGTTGCAGCAGAT+TGG | 0.492138 | 5.3:-65045153 | MS.gene29515:CDS |
| TATTTCTGCGAGCAGCTGTT+CGG | 0.499505 | 5.3:-65043814 | MS.gene29515:CDS |
| TTAGATAAGTGGACTTTGAT+GGG | 0.499763 | 5.3:-65044757 | MS.gene29515:CDS |
| AGGGTTTGGGATTTATTGAA+AGG | 0.501241 | 5.3:+65045483 | None:intergenic |
| AATGGTGAGGTTTATGGAGA+AGG | 0.501783 | 5.3:-65045115 | MS.gene29515:CDS |
| TGGGATTGTTGTTGGTGAGC+CGG | 0.502603 | 5.3:-65045025 | MS.gene29515:CDS |
| TGAGATTATAGATTGGATTG+AGG | 0.502704 | 5.3:-65044278 | MS.gene29515:CDS |
| GCTGCTCGCAGAAATAGATC+TGG | 0.503893 | 5.3:+65043821 | None:intergenic |
| CGGAACTTCCGTGGCAGCAA+TGG | 0.504345 | 5.3:-65044822 | MS.gene29515:CDS |
| CCAGAAGAGTGGAAGTATGT+TGG | 0.505180 | 5.3:-65043887 | MS.gene29515:CDS |
| GGTATAAGTATGGTGAATAT+GGG | 0.506400 | 5.3:-65045062 | MS.gene29515:CDS |
| TGGAAGAAGATGTGAAGGGC+TGG | 0.506654 | 5.3:-65044090 | MS.gene29515:CDS |
| TCCGTGCGAGGATCAAGAAA+TGG | 0.508804 | 5.3:+65044601 | None:intergenic |
| AGTTCCGAAACTCTCCACTT+TGG | 0.512515 | 5.3:+65044838 | None:intergenic |
| ACTTGTGAAGGTGAATCAAA+AGG | 0.514790 | 5.3:-65044503 | MS.gene29515:CDS |
| GTAAACAGAGATTAGATAAG+TGG | 0.514937 | 5.3:-65044768 | MS.gene29515:CDS |
| AAGTGAAGGATCATGAAGAG+TGG | 0.518155 | 5.3:-65044960 | MS.gene29515:CDS |
| GAAACAACGCGTTCAGTAGA+CGG | 0.518243 | 5.3:-65043950 | MS.gene29515:CDS |
| AGAAGATGTGAAGGGCTGGA+AGG | 0.524200 | 5.3:-65044086 | MS.gene29515:CDS |
| TGTCAGTTAGAAAATGATGA+TGG | 0.526533 | 5.3:-65044565 | MS.gene29515:CDS |
| TGGACTTTGATGGGTAGACT+TGG | 0.527390 | 5.3:-65044748 | MS.gene29515:CDS |
| ACAAGATTTCTGTAACTGAA+AGG | 0.529435 | 5.3:+65043791 | None:intergenic |
| GACGGTGATGCTGAATTTGA+TGG | 0.531882 | 5.3:-65044244 | MS.gene29515:CDS |
| GAACAAGGCGAGGTCGTTGG+TGG | 0.532527 | 5.3:-65044725 | MS.gene29515:CDS |
| AGTGAAGGATCATGAAGAGT+GGG | 0.533298 | 5.3:-65044959 | MS.gene29515:CDS |
| GAAGGATCATGAAGAGTGGG+AGG | 0.533393 | 5.3:-65044956 | MS.gene29515:CDS |
| AATGATGACAGCGGAGGCAG+GGG | 0.541534 | 5.3:-65043975 | MS.gene29515:CDS |
| GATGGGTAGACTTGGGAACA+AGG | 0.541745 | 5.3:-65044740 | MS.gene29515:CDS |
| AGTATGTTGGGGTCGGTCCG+TGG | 0.545117 | 5.3:-65043874 | MS.gene29515:CDS |
| ACTAATGTCCATTGCTGCCA+CGG | 0.545549 | 5.3:+65044814 | None:intergenic |
| TATGGGCCGTATTCTTGGCG+TGG | 0.547439 | 5.3:-65045045 | MS.gene29515:CDS |
| ATGGGCCGTATTCTTGGCGT+GGG | 0.548779 | 5.3:-65045044 | MS.gene29515:CDS |
| AAATGATGACAGCGGAGGCA+GGG | 0.549562 | 5.3:-65043976 | MS.gene29515:CDS |
| ATAGATTGGATTGAGGATGA+AGG | 0.550849 | 5.3:-65044271 | MS.gene29515:CDS |
| TCAAACCTACACTGGAACAC+CGG | 0.551313 | 5.3:+65044655 | None:intergenic |
| GATAATTCCCACGTCCCCTA+GGG | 0.552003 | 5.3:+65045190 | None:intergenic |
| GACATGGAAGAAAGCAAAGA+TGG | 0.552660 | 5.3:-65044127 | MS.gene29515:CDS |
| TATGGATGTAAAATTTGCAC+TGG | 0.556124 | 5.3:+65044394 | None:intergenic |
| GATGACAGCGGAGGCAGGGG+AGG | 0.560168 | 5.3:-65043972 | MS.gene29515:CDS |
| AGCGTCCGGTGTTCCAGTGT+AGG | 0.561427 | 5.3:-65044660 | MS.gene29515:CDS |
| AGATGGTAAATTCCATGCCA+TGG | 0.563672 | 5.3:-65044110 | MS.gene29515:CDS |
| TGCCATGGAAGAAGATGTGA+AGG | 0.565694 | 5.3:-65044095 | MS.gene29515:CDS |
| GACGATAATTAATGAAGTGA+AGG | 0.567261 | 5.3:-65044974 | MS.gene29515:CDS |
| AGTGAGGTGGTACTTGAAGC+TGG | 0.567986 | 5.3:-65044790 | MS.gene29515:CDS |
| GTTGGTGAGCCGGTTAGTGG+TGG | 0.568225 | 5.3:-65045015 | MS.gene29515:CDS |
| CTTGTGGCTCAAACCTACAC+TGG | 0.570916 | 5.3:+65044647 | None:intergenic |
| TCCATATACTAAAGAGTGGA+AGG | 0.576505 | 5.3:-65044377 | MS.gene29515:CDS |
| TCCATTTCTTGATCCTCGCA+CGG | 0.582367 | 5.3:-65044602 | MS.gene29515:CDS |
| AAGTTGGAAGAGATGGAGCT+TGG | 0.584190 | 5.3:-65044352 | MS.gene29515:CDS |
| TCTTCTGGTGGTAGATTGGA+AGG | 0.584210 | 5.3:-65045300 | MS.gene29515:CDS |
| CCATACTTATACCAATCATA+CGG | 0.586671 | 5.3:+65045072 | None:intergenic |
| TGGGAACAAGGCGAGGTCGT+TGG | 0.588053 | 5.3:-65044728 | MS.gene29515:CDS |
| TGCAGACCAAGATCTAGTTA+CGG | 0.589324 | 5.3:-65044149 | MS.gene29515:CDS |
| TACATCCATATACTAAAGAG+TGG | 0.591304 | 5.3:-65044381 | MS.gene29515:CDS |
| TGCGGGTCGTAGTAAGAAGA+CGG | 0.591662 | 5.3:-65045334 | MS.gene29515:CDS |
| CCAAGATCTAGTTACGGACA+TGG | 0.594116 | 5.3:-65044143 | MS.gene29515:CDS |
| CGAAGGTTAGTCCAGAAGAG+TGG | 0.597587 | 5.3:-65043898 | MS.gene29515:CDS |
| TTGGTGAGCCGGTTAGTGGT+GGG | 0.598420 | 5.3:-65045014 | MS.gene29515:CDS |
| GGAGAGTTTCGGAACTTCCG+TGG | 0.600733 | 5.3:-65044831 | MS.gene29515:CDS |
| GGACTTTGATGGGTAGACTT+GGG | 0.600845 | 5.3:-65044747 | MS.gene29515:CDS |
| CGATGATGATCAAGAGATGG+AGG | 0.608843 | 5.3:-65044206 | MS.gene29515:CDS |
| TGATGATCAAGAGATGGAGG+AGG | 0.609080 | 5.3:-65044203 | MS.gene29515:CDS |
| GCGGGTCGTAGTAAGAAGAC+GGG | 0.610634 | 5.3:-65045333 | MS.gene29515:CDS |
| AGGTAATCTTGTTCCGTGCG+AGG | 0.617139 | 5.3:+65044589 | None:intergenic |
| TATTGTGTATGTCAAGCGTC+CGG | 0.618713 | 5.3:-65044674 | MS.gene29515:CDS |
| GAGTGGAAGTATGTTGGGGT+CGG | 0.621367 | 5.3:-65043881 | MS.gene29515:CDS |
| AAGCAATAGAAAATATGGCA+AGG | 0.622667 | 5.3:-65044036 | MS.gene29515:CDS |
| GAGACGTGTACTTATTATGG+TGG | 0.632746 | 5.3:-65044535 | MS.gene29515:CDS |
| TTTAAGAGGAAAGCGAGCGA+AGG | 0.635822 | 5.3:-65043915 | MS.gene29515:CDS |
| GCAATGGACATTAGTTAGTG+AGG | 0.638320 | 5.3:-65044806 | MS.gene29515:CDS |
| TGACGATGATGATCAAGAGA+TGG | 0.640747 | 5.3:-65044209 | MS.gene29515:CDS |
| GACGGATGAAACGTAATGCG+AGG | 0.643669 | 5.3:-65045260 | MS.gene29515:CDS |
| GGTGGTGCGTCGTCTTCTGG+TGG | 0.646886 | 5.3:-65045312 | MS.gene29515:CDS |
| GCTCGCAGAAATAGATCTGG+AGG | 0.651520 | 5.3:+65043824 | None:intergenic |
| AGAAGAGTGGAAGTATGTTG+GGG | 0.652864 | 5.3:-65043885 | MS.gene29515:CDS |
| TGGATTGTGTAAACTTGTGA+AGG | 0.667346 | 5.3:-65044515 | MS.gene29515:CDS |
| TGGTCTTGGATATGATCGAA+TGG | 0.675588 | 5.3:-65045133 | MS.gene29515:CDS |
| ATGGACATTAGTTAGTGAGG+TGG | 0.676342 | 5.3:-65044803 | MS.gene29515:CDS |
| GTAGACTTGGGAACAAGGCG+AGG | 0.677293 | 5.3:-65044735 | MS.gene29515:CDS |
| TTGGATATGATCGAATGGTG+AGG | 0.678613 | 5.3:-65045128 | MS.gene29515:CDS |
| GGTCGTAGTAAGAAGACGGG+TGG | 0.679738 | 5.3:-65045330 | MS.gene29515:CDS |
| ATTGAGGATGAAGGTAGTGA+CGG | 0.688379 | 5.3:-65044262 | MS.gene29515:CDS |
| TAAGAAGCAAATGATGACAG+CGG | 0.689543 | 5.3:-65043984 | MS.gene29515:CDS |
| GAAGCAAATGATGACAGCGG+AGG | 0.696613 | 5.3:-65043981 | MS.gene29515:CDS |
| TGGTGGCGCAATGTGCAGCG+TGG | 0.711158 | 5.3:-65044708 | MS.gene29515:CDS |
| GCCATGGAAGAAGATGTGAA+GGG | 0.771952 | 5.3:-65044094 | MS.gene29515:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGGAAAATTTATTGTA+AGG | + | chr5.3:65043790-65043809 | None:intergenic | 15.0% |
| !! | TTTATTGAAAGGTTTAAAAA+AGG | + | chr5.3:65043806-65043825 | None:intergenic | 15.0% |
| !! | AATTTATTGTAAGGTGAAAA+TGG | + | chr5.3:65043781-65043800 | None:intergenic | 20.0% |
| !! | ATTTATTGTAAGGTGAAAAT+GGG | + | chr5.3:65043780-65043799 | None:intergenic | 20.0% |
| !! | TGAAAAAAAGTCAAAATGTT+TGG | - | chr5.3:65044860-65044879 | MS.gene29515:CDS | 20.0% |
| !!! | AAACTAAGTTAAGGTATTTT+TGG | - | chr5.3:65044421-65044440 | MS.gene29515:CDS | 20.0% |
| !!! | AACTAAGTTAAGGTATTTTT+GGG | - | chr5.3:65044422-65044441 | MS.gene29515:CDS | 20.0% |
| !!! | TTAAAGAGATTGTTTTAACT+AGG | - | chr5.3:65045528-65045547 | MS.gene29515:CDS | 20.0% |
| ! | ATGATACTGAGATTATAGAT+TGG | - | chr5.3:65045012-65045031 | MS.gene29515:CDS | 25.0% |
| ! | CAAGAATTCAGTTGTAAAAT+GGG | + | chr5.3:65043743-65043762 | None:intergenic | 25.0% |
| ! | GCATTAAAAAAGTTATCTTG+TGG | + | chr5.3:65044669-65044688 | None:intergenic | 25.0% |
| ! | TTGAAATTTGATTAGGGTTT+GGG | + | chr5.3:65043830-65043849 | None:intergenic | 25.0% |
| !! | AAACAACTTCAAATCTTTTG+TGG | + | chr5.3:65043855-65043874 | None:intergenic | 25.0% |
| !! | AACAACTTCAAATCTTTTGT+GGG | + | chr5.3:65043854-65043873 | None:intergenic | 25.0% |
| !! | GAATTATCCCGATAATTTTT+CGG | - | chr5.3:65044122-65044141 | MS.gene29515:CDS | 25.0% |
| !!! | AAAATGTTTGGAGTTTCTTT+TGG | - | chr5.3:65044872-65044891 | MS.gene29515:CDS | 25.0% |
| !!! | AAATGTTTGGAGTTTCTTTT+GGG | - | chr5.3:65044873-65044892 | MS.gene29515:CDS | 25.0% |
| !!! | TTCTTAATCTTTTTTCTCCA+CGG | + | chr5.3:65045443-65045462 | None:intergenic | 25.0% |
| AAAATCCCAAATTCACTATC+AGG | + | chr5.3:65043898-65043917 | None:intergenic | 30.0% | |
| AAATCCTCCGAAAAATTATC+GGG | + | chr5.3:65044132-65044151 | None:intergenic | 30.0% | |
| AAGCAATAGAAAATATGGCA+AGG | - | chr5.3:65045261-65045280 | MS.gene29515:CDS | 30.0% | |
| ACAAGATTTCTGTAACTGAA+AGG | + | chr5.3:65045509-65045528 | None:intergenic | 30.0% | |
| AGTTGGATCAAACTAAGTTA+AGG | - | chr5.3:65044412-65044431 | MS.gene29515:CDS | 30.0% | |
| ATATCATCATCTTCTTCATC+AGG | + | chr5.3:65044981-65045000 | None:intergenic | 30.0% | |
| CAAATCCTCCGAAAAATTAT+CGG | + | chr5.3:65044133-65044152 | None:intergenic | 30.0% | |
| CCATACTTATACCAATCATA+CGG | + | chr5.3:65044228-65044247 | None:intergenic | 30.0% | |
| GAAGAAGATGATGATATTGT+TGG | - | chr5.3:65044984-65045003 | MS.gene29515:CDS | 30.0% | |
| GACGATAATTAATGAAGTGA+AGG | - | chr5.3:65044323-65044342 | MS.gene29515:CDS | 30.0% | |
| GCAAGAATTCAGTTGTAAAA+TGG | + | chr5.3:65043744-65043763 | None:intergenic | 30.0% | |
| GGTATAAGTATGGTGAATAT+GGG | - | chr5.3:65044235-65044254 | MS.gene29515:CDS | 30.0% | |
| GTAAACAGAGATTAGATAAG+TGG | - | chr5.3:65044529-65044548 | MS.gene29515:CDS | 30.0% | |
| GTTGAAATTTGATTAGGGTT+TGG | + | chr5.3:65043831-65043850 | None:intergenic | 30.0% | |
| TACATCCATATACTAAAGAG+TGG | - | chr5.3:65044916-65044935 | MS.gene29515:CDS | 30.0% | |
| TATGGATGTAAAATTTGCAC+TGG | + | chr5.3:65044906-65044925 | None:intergenic | 30.0% | |
| TGAGATTATAGATTGGATTG+AGG | - | chr5.3:65045019-65045038 | MS.gene29515:CDS | 30.0% | |
| TGCAGAAGCAATAGAAAATA+TGG | - | chr5.3:65045256-65045275 | MS.gene29515:CDS | 30.0% | |
| TGGTATAAGTATGGTGAATA+TGG | - | chr5.3:65044234-65044253 | MS.gene29515:CDS | 30.0% | |
| TGTCAGTTAGAAAATGATGA+TGG | - | chr5.3:65044732-65044751 | MS.gene29515:CDS | 30.0% | |
| ! | AAGATTTGAAGTTGTTTCGT+TGG | - | chr5.3:65043858-65043877 | MS.gene29515:CDS | 30.0% |
| ! | ACAACTTCAAATCTTTTGTG+GGG | + | chr5.3:65043853-65043872 | None:intergenic | 30.0% |
| ! | ATTAGATAAGTGGACTTTGA+TGG | - | chr5.3:65044539-65044558 | MS.gene29515:CDS | 30.0% |
| ! | CATCATTTTCTAACTGACAA+AGG | + | chr5.3:65044731-65044750 | None:intergenic | 30.0% |
| ! | TGTGTAGTAGAAGAGATTTT+GGG | - | chr5.3:65043935-65043954 | MS.gene29515:CDS | 30.0% |
| ! | TTAGATAAGTGGACTTTGAT+GGG | - | chr5.3:65044540-65044559 | MS.gene29515:CDS | 30.0% |
| ! | TTATAGGTTGAAAAACCCTA+GGG | - | chr5.3:65044092-65044111 | MS.gene29515:CDS | 30.0% |
| ! | TTTAACTAGGCATGCAATTT+TGG | - | chr5.3:65045541-65045560 | MS.gene29515:CDS | 30.0% |
| ! | TTTATAGGTTGAAAAACCCT+AGG | - | chr5.3:65044091-65044110 | MS.gene29515:CDS | 30.0% |
| !!! | GGTATTTTTGGGTTTTCATT+AGG | - | chr5.3:65044433-65044452 | MS.gene29515:CDS | 30.0% |
| !!! | TTGCTGAGAGTTTGTTTTAT+AGG | - | chr5.3:65044076-65044095 | MS.gene29515:CDS | 30.0% |
| ACTTGTGAAGGTGAATCAAA+AGG | - | chr5.3:65044794-65044813 | MS.gene29515:CDS | 35.0% | |
| AGAAGGATGATCCGAATTTA+AGG | - | chr5.3:65044199-65044218 | MS.gene29515:CDS | 35.0% | |
| ATAGATTGGATTGAGGATGA+AGG | - | chr5.3:65045026-65045045 | MS.gene29515:CDS | 35.0% | |
| CCGTATGATTGGTATAAGTA+TGG | - | chr5.3:65044225-65044244 | MS.gene29515:CDS | 35.0% | |
| GGAGATTGAGAAATCTGAAA+TGG | - | chr5.3:65044362-65044381 | MS.gene29515:CDS | 35.0% | |
| GTGGGGTTGAAATTTGATTA+GGG | + | chr5.3:65043836-65043855 | None:intergenic | 35.0% | |
| GTTGAGACGTGTACTTATTA+TGG | - | chr5.3:65044759-65044778 | MS.gene29515:CDS | 35.0% | |
| TAAGAAGCAAATGATGACAG+CGG | - | chr5.3:65045313-65045332 | MS.gene29515:CDS | 35.0% | |
| TCATACGGATGCCTTAAATT+CGG | + | chr5.3:65044213-65044232 | None:intergenic | 35.0% | |
| TCCATATACTAAAGAGTGGA+AGG | - | chr5.3:65044920-65044939 | MS.gene29515:CDS | 35.0% | |
| TGGATTGTGTAAACTTGTGA+AGG | - | chr5.3:65044782-65044801 | MS.gene29515:CDS | 35.0% | |
| TGTGGGGTTGAAATTTGATT+AGG | + | chr5.3:65043837-65043856 | None:intergenic | 35.0% | |
| ! | ACGAAACCTGATAGTGAATT+TGG | - | chr5.3:65043889-65043908 | MS.gene29515:CDS | 35.0% |
| ! | AGGGTTTGGGATTTATTGAA+AGG | + | chr5.3:65043817-65043836 | None:intergenic | 35.0% |
| ! | ATTTAAGGCATCCGTATGAT+TGG | - | chr5.3:65044214-65044233 | MS.gene29515:CDS | 35.0% |
| ! | CGAAACCTGATAGTGAATTT+GGG | - | chr5.3:65043890-65043909 | MS.gene29515:CDS | 35.0% |
| ! | GAAAATGGGTTTAAGGTTCT+AGG | + | chr5.3:65043766-65043785 | None:intergenic | 35.0% |
| ! | GTAAGGTGAAAATGGGTTTA+AGG | + | chr5.3:65043773-65043792 | None:intergenic | 35.0% |
| ! | GTGTGTAGTAGAAGAGATTT+TGG | - | chr5.3:65043934-65043953 | MS.gene29515:CDS | 35.0% |
| ! | TATAGGTTGAAAAACCCTAG+GGG | - | chr5.3:65044093-65044112 | MS.gene29515:CDS | 35.0% |
| ! | TTTTCATTAGGCATCCAAAG+TGG | - | chr5.3:65044445-65044464 | MS.gene29515:CDS | 35.0% |
| !! | AAGAGATTTTGGGTGTTATG+CGG | - | chr5.3:65043945-65043964 | MS.gene29515:CDS | 35.0% |
| !! | TTATCCCGATAATTTTTCGG+AGG | - | chr5.3:65044125-65044144 | MS.gene29515:CDS | 35.0% |
| !!! | AAAGGCTTTTGTTGATGATG+TGG | - | chr5.3:65044812-65044831 | MS.gene29515:CDS | 35.0% |
| !!! | TGGAAGGTAATGCTGATTTT+CGG | - | chr5.3:65044013-65044032 | MS.gene29515:CDS | 35.0% |
| AAGTGAAGGATCATGAAGAG+TGG | - | chr5.3:65044337-65044356 | MS.gene29515:CDS | 40.0% | |
| AATGGTGAGGTTTATGGAGA+AGG | - | chr5.3:65044182-65044201 | MS.gene29515:CDS | 40.0% | |
| ACTATCAGGTTTCGTGTTTC+GGG | + | chr5.3:65043884-65043903 | None:intergenic | 40.0% | |
| AGATGGTAAATTCCATGCCA+TGG | - | chr5.3:65045187-65045206 | MS.gene29515:CDS | 40.0% | |
| AGTGAAGGATCATGAAGAGT+GGG | - | chr5.3:65044338-65044357 | MS.gene29515:CDS | 40.0% | |
| ATGGACATTAGTTAGTGAGG+TGG | - | chr5.3:65044494-65044513 | MS.gene29515:CDS | 40.0% | |
| ATTGAGGATGAAGGTAGTGA+CGG | - | chr5.3:65045035-65045054 | MS.gene29515:CDS | 40.0% | |
| CACTATCAGGTTTCGTGTTT+CGG | + | chr5.3:65043885-65043904 | None:intergenic | 40.0% | |
| CGCTTGACATACACAATATC+AGG | + | chr5.3:65044621-65044640 | None:intergenic | 40.0% | |
| GACATGGAAGAAAGCAAAGA+TGG | - | chr5.3:65045170-65045189 | MS.gene29515:CDS | 40.0% | |
| GAGACGTGTACTTATTATGG+TGG | - | chr5.3:65044762-65044781 | MS.gene29515:CDS | 40.0% | |
| GCAATGGACATTAGTTAGTG+AGG | - | chr5.3:65044491-65044510 | MS.gene29515:CDS | 40.0% | |
| GCCTTCCACTCTTTAGTATA+TGG | + | chr5.3:65044924-65044943 | None:intergenic | 40.0% | |
| TAAAGAGTGGAAGGCTAAGT+TGG | - | chr5.3:65044929-65044948 | MS.gene29515:CDS | 40.0% | |
| TATTGTGTATGTCAAGCGTC+CGG | - | chr5.3:65044623-65044642 | MS.gene29515:CDS | 40.0% | |
| TGACGATGATGATCAAGAGA+TGG | - | chr5.3:65045088-65045107 | MS.gene29515:CDS | 40.0% | |
| TGATCGAATGGTGAGGTTTA+TGG | - | chr5.3:65044176-65044195 | MS.gene29515:CDS | 40.0% | |
| TGCAGACCAAGATCTAGTTA+CGG | - | chr5.3:65045148-65045167 | MS.gene29515:CDS | 40.0% | |
| TGGGAAAAAAGTGAAGCAGT+TGG | - | chr5.3:65044395-65044414 | MS.gene29515:CDS | 40.0% | |
| TTGGATATGATCGAATGGTG+AGG | - | chr5.3:65044169-65044188 | MS.gene29515:CDS | 40.0% | |
| ! | ACTAGGCATGCAATTTTGGA+TGG | - | chr5.3:65045545-65045564 | MS.gene29515:CDS | 40.0% |
| ! | AGAAGAGTGGAAGTATGTTG+GGG | - | chr5.3:65045412-65045431 | MS.gene29515:CDS | 40.0% |
| ! | CAGAAGAGTGGAAGTATGTT+GGG | - | chr5.3:65045411-65045430 | MS.gene29515:CDS | 40.0% |
| ! | GCAATTTTGGATGGTGACAT+TGG | - | chr5.3:65045554-65045573 | MS.gene29515:CDS | 40.0% |
| ! | TGGTCTTGGATATGATCGAA+TGG | - | chr5.3:65044164-65044183 | MS.gene29515:CDS | 40.0% |
| ! | TTTTGGATGGTGACATTGGT+AGG | - | chr5.3:65045558-65045577 | MS.gene29515:CDS | 40.0% |
| !! | AGAGATTTTGGGTGTTATGC+GGG | - | chr5.3:65043946-65043965 | MS.gene29515:CDS | 40.0% |
| !! | GGAGACGAAACTGTTTTAAG+AGG | - | chr5.3:65045368-65045387 | MS.gene29515:CDS | 40.0% |
| !!! | CTGAAATGGCTGCTGATTTT+GGG | - | chr5.3:65044376-65044395 | MS.gene29515:CDS | 40.0% |
| !!! | GTAATGCTGATTTTCGGAGA+CGG | - | chr5.3:65044019-65044038 | MS.gene29515:CDS | 40.0% |
| !!! | TCTGAAATGGCTGCTGATTT+TGG | - | chr5.3:65044375-65044394 | MS.gene29515:CDS | 40.0% |
| AAGTTGGAAGAGATGGAGCT+TGG | - | chr5.3:65044945-65044964 | MS.gene29515:CDS | 45.0% | |
| ACAATCCCACGCCAAGAATA+CGG | + | chr5.3:65044261-65044280 | None:intergenic | 45.0% | |
| ACTAATGTCCATTGCTGCCA+CGG | + | chr5.3:65044486-65044505 | None:intergenic | 45.0% | |
| AGTTCCGAAACTCTCCACTT+TGG | + | chr5.3:65044462-65044481 | None:intergenic | 45.0% | |
| CCAACATACTTCCACTCTTC+TGG | + | chr5.3:65045413-65045432 | None:intergenic | 45.0% | |
| CCAAGATCTAGTTACGGACA+TGG | - | chr5.3:65045154-65045173 | MS.gene29515:CDS | 45.0% | |
| CCATGTCCGTAACTAGATCT+TGG | + | chr5.3:65045157-65045176 | None:intergenic | 45.0% | |
| CGATGATGATCAAGAGATGG+AGG | - | chr5.3:65045091-65045110 | MS.gene29515:CDS | 45.0% | |
| GAAACAACGCGTTCAGTAGA+CGG | - | chr5.3:65045347-65045366 | MS.gene29515:CDS | 45.0% | |
| GACGGTGATGCTGAATTTGA+TGG | - | chr5.3:65045053-65045072 | MS.gene29515:CDS | 45.0% | |
| GCATCCAAAGTGGAGAGTTT+CGG | - | chr5.3:65044455-65044474 | MS.gene29515:CDS | 45.0% | |
| GCCATGGAAGAAGATGTGAA+GGG | - | chr5.3:65045203-65045222 | MS.gene29515:CDS | 45.0% | |
| GTGAATATGGGCCGTATTCT+TGG | - | chr5.3:65044247-65044266 | MS.gene29515:CDS | 45.0% | |
| TCAAACCTACACTGGAACAC+CGG | + | chr5.3:65044645-65044664 | None:intergenic | 45.0% | |
| TCACATCTTCTTCCATGGCA+TGG | + | chr5.3:65045202-65045221 | None:intergenic | 45.0% | |
| TCCATTTCTTGATCCTCGCA+CGG | - | chr5.3:65044695-65044714 | MS.gene29515:CDS | 45.0% | |
| TCTTCTGGTGGTAGATTGGA+AGG | - | chr5.3:65043997-65044016 | MS.gene29515:CDS | 45.0% | |
| TGATGATCAAGAGATGGAGG+AGG | - | chr5.3:65045094-65045113 | MS.gene29515:CDS | 45.0% | |
| TGCCATGGAAGAAGATGTGA+AGG | - | chr5.3:65045202-65045221 | MS.gene29515:CDS | 45.0% | |
| TTTAAGAGGAAAGCGAGCGA+AGG | - | chr5.3:65045382-65045401 | MS.gene29515:CDS | 45.0% | |
| ! | CCAGAAGAGTGGAAGTATGT+TGG | - | chr5.3:65045410-65045429 | MS.gene29515:CDS | 45.0% |
| ! | GAAGGCTAAGTTGGAAGAGA+TGG | - | chr5.3:65044938-65044957 | MS.gene29515:CDS | 45.0% |
| ! | GGACTTTGATGGGTAGACTT+GGG | - | chr5.3:65044550-65044569 | MS.gene29515:CDS | 45.0% |
| ! | TATTTCTGCGAGCAGCTGTT+CGG | - | chr5.3:65045483-65045502 | MS.gene29515:CDS | 45.0% |
| ! | TGGACTTTGATGGGTAGACT+TGG | - | chr5.3:65044549-65044568 | MS.gene29515:CDS | 45.0% |
| !! | GAGGATTTGTTGCAGCAGAT+TGG | - | chr5.3:65044144-65044163 | MS.gene29515:CDS | 45.0% |
| !! | TTGTTGCAGCAGATTGGTCT+TGG | - | chr5.3:65044150-65044169 | MS.gene29515:CDS | 45.0% |
| AAATGATGACAGCGGAGGCA+GGG | - | chr5.3:65045321-65045340 | MS.gene29515:CDS | 50.0% | |
| AGAAGATGTGAAGGGCTGGA+AGG | - | chr5.3:65045211-65045230 | MS.gene29515:CDS | 50.0% | |
| AGGTAATCTTGTTCCGTGCG+AGG | + | chr5.3:65044711-65044730 | None:intergenic | 50.0% | |
| AGTGAGGTGGTACTTGAAGC+TGG | - | chr5.3:65044507-65044526 | MS.gene29515:CDS | 50.0% | |
| CTTGTGGCTCAAACCTACAC+TGG | + | chr5.3:65044653-65044672 | None:intergenic | 50.0% | |
| GAAGCAAATGATGACAGCGG+AGG | - | chr5.3:65045316-65045335 | MS.gene29515:CDS | 50.0% | |
| GAAGGATCATGAAGAGTGGG+AGG | - | chr5.3:65044341-65044360 | MS.gene29515:CDS | 50.0% | |
| GACGGATGAAACGTAATGCG+AGG | - | chr5.3:65044037-65044056 | MS.gene29515:CDS | 50.0% | |
| GATAATTCCCACGTCCCCTA+GGG | + | chr5.3:65044110-65044129 | None:intergenic | 50.0% | |
| GATGGGTAGACTTGGGAACA+AGG | - | chr5.3:65044557-65044576 | MS.gene29515:CDS | 50.0% | |
| GCCCTTCACATCTTCTTCCA+TGG | + | chr5.3:65045207-65045226 | None:intergenic | 50.0% | |
| GCTCGCAGAAATAGATCTGG+AGG | + | chr5.3:65045476-65045495 | None:intergenic | 50.0% | |
| GCTGCTCGCAGAAATAGATC+TGG | + | chr5.3:65045479-65045498 | None:intergenic | 50.0% | |
| GTCGTCTTCTGGTGGTAGAT+TGG | - | chr5.3:65043993-65044012 | MS.gene29515:CDS | 50.0% | |
| TCCGTAATCCCACCACTAAC+CGG | + | chr5.3:65044294-65044313 | None:intergenic | 50.0% | |
| TCCGTGCGAGGATCAAGAAA+TGG | + | chr5.3:65044699-65044718 | None:intergenic | 50.0% | |
| TCTTGGCGTGGGATTGTTGT+TGG | - | chr5.3:65044264-65044283 | MS.gene29515:CDS | 50.0% | |
| TGAAAAACCCTAGGGGACGT+GGG | - | chr5.3:65044100-65044119 | MS.gene29515:CDS | 50.0% | |
| TGATCAAGAGATGGAGGAGG+AGG | - | chr5.3:65045097-65045116 | MS.gene29515:CDS | 50.0% | |
| TGCGGGTCGTAGTAAGAAGA+CGG | - | chr5.3:65043963-65043982 | MS.gene29515:CDS | 50.0% | |
| TGGAAGAAGATGTGAAGGGC+TGG | - | chr5.3:65045207-65045226 | MS.gene29515:CDS | 50.0% | |
| TTGAAAAACCCTAGGGGACG+TGG | - | chr5.3:65044099-65044118 | MS.gene29515:CDS | 50.0% | |
| ! | CGAAGGTTAGTCCAGAAGAG+TGG | - | chr5.3:65045399-65045418 | MS.gene29515:CDS | 50.0% |
| ! | GAGTGGAAGTATGTTGGGGT+CGG | - | chr5.3:65045416-65045435 | MS.gene29515:CDS | 50.0% |
| ! | TGGGATTGTTGTTGGTGAGC+CGG | - | chr5.3:65044272-65044291 | MS.gene29515:CDS | 50.0% |
| AATGATGACAGCGGAGGCAG+GGG | - | chr5.3:65045322-65045341 | MS.gene29515:CDS | 55.0% | |
| AGAGATGGAGGAGGAGGATG+AGG | - | chr5.3:65045103-65045122 | MS.gene29515:CDS | 55.0% | |
| ATGGGCCGTATTCTTGGCGT+GGG | - | chr5.3:65044253-65044272 | MS.gene29515:CDS | 55.0% | |
| CAAATGATGACAGCGGAGGC+AGG | - | chr5.3:65045320-65045339 | MS.gene29515:CDS | 55.0% | |
| GCGGGTCGTAGTAAGAAGAC+GGG | - | chr5.3:65043964-65043983 | MS.gene29515:CDS | 55.0% | |
| GGAGAGTTTCGGAACTTCCG+TGG | - | chr5.3:65044466-65044485 | MS.gene29515:CDS | 55.0% | |
| GGATAATTCCCACGTCCCCT+AGG | + | chr5.3:65044111-65044130 | None:intergenic | 55.0% | |
| GGTCGTAGTAAGAAGACGGG+TGG | - | chr5.3:65043967-65043986 | MS.gene29515:CDS | 55.0% | |
| GTAGACTTGGGAACAAGGCG+AGG | - | chr5.3:65044562-65044581 | MS.gene29515:CDS | 55.0% | |
| TATGGGCCGTATTCTTGGCG+TGG | - | chr5.3:65044252-65044271 | MS.gene29515:CDS | 55.0% | |
| TTGGTGAGCCGGTTAGTGGT+GGG | - | chr5.3:65044283-65044302 | MS.gene29515:CDS | 55.0% | |
| ! | GCCGGTTAGTGGTGGGATTA+CGG | - | chr5.3:65044290-65044309 | MS.gene29515:CDS | 55.0% |
| ! | GTTGTTGGTGAGCCGGTTAG+TGG | - | chr5.3:65044279-65044298 | MS.gene29515:CDS | 55.0% |
| AGCGTCCGGTGTTCCAGTGT+AGG | - | chr5.3:65044637-65044656 | MS.gene29515:CDS | 60.0% | |
| AGTATGTTGGGGTCGGTCCG+TGG | - | chr5.3:65045423-65045442 | MS.gene29515:CDS | 60.0% | |
| CGGAACTTCCGTGGCAGCAA+TGG | - | chr5.3:65044475-65044494 | MS.gene29515:CDS | 60.0% | |
| GAACAAGGCGAGGTCGTTGG+TGG | - | chr5.3:65044572-65044591 | MS.gene29515:CDS | 60.0% | |
| TGGGAACAAGGCGAGGTCGT+TGG | - | chr5.3:65044569-65044588 | MS.gene29515:CDS | 60.0% | |
| ! | GTTGGTGAGCCGGTTAGTGG+TGG | - | chr5.3:65044282-65044301 | MS.gene29515:CDS | 60.0% |
| ACGGGTGGTGCGTCGTCTTC+TGG | - | chr5.3:65043982-65044001 | MS.gene29515:CDS | 65.0% | |
| GGTGGTGCGTCGTCTTCTGG+TGG | - | chr5.3:65043985-65044004 | MS.gene29515:CDS | 65.0% | |
| ! | TGGTGGCGCAATGTGCAGCG+TGG | - | chr5.3:65044589-65044608 | MS.gene29515:CDS | 65.0% |
| GATGACAGCGGAGGCAGGGG+AGG | - | chr5.3:65045325-65045344 | MS.gene29515:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 65043730 | 65045589 | 65043730 | ID=MS.gene29515 |
| chr5.3 | mRNA | 65043730 | 65045589 | 65043730 | ID=MS.gene29515.t1;Parent=MS.gene29515 |
| chr5.3 | exon | 65043730 | 65045589 | 65043730 | ID=MS.gene29515.t1.exon1;Parent=MS.gene29515.t1 |
| chr5.3 | CDS | 65043730 | 65045589 | 65043730 | ID=cds.MS.gene29515.t1;Parent=MS.gene29515.t1 |
| Gene Sequence |
| Protein sequence |
