AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30407.t1 MTR_8g021020 82.460 439 32 4 114 515 1 431 0.0 719
MS.gene30407.t1 MTR_8g020990 98.204 334 6 0 182 515 535 868 0.0 688
MS.gene30407.t1 MTR_8g020990 99.000 100 1 0 83 182 264 363 2.91e-57 205
MS.gene30407.t1 MTR_8g018570 86.826 334 44 0 182 515 537 870 0.0 622
MS.gene30407.t1 MTR_8g018570 76.000 100 24 0 83 182 266 365 8.94e-44 166
MS.gene30407.t1 MTR_8g018550 87.126 334 43 0 182 515 535 868 0.0 619
MS.gene30407.t1 MTR_8g018550 80.612 98 19 0 85 182 266 363 2.86e-45 170
MS.gene30407.t1 MTR_8g018690 83.234 334 56 0 182 515 512 845 0.0 598
MS.gene30407.t1 MTR_8g018690 65.306 98 29 1 85 182 248 340 2.48e-34 138
MS.gene30407.t1 MTR_8g018690 83.234 334 56 0 182 515 532 865 0.0 598
MS.gene30407.t1 MTR_8g018690 65.306 98 29 1 85 182 268 360 2.90e-34 137
MS.gene30407.t1 MTR_8g018430 82.335 334 59 0 182 515 528 861 0.0 594
MS.gene30407.t1 MTR_8g018430 73.469 98 26 0 85 182 259 356 1.19e-41 160
MS.gene30407.t1 MTR_8g018450 81.437 334 62 0 182 515 495 828 0.0 586
MS.gene30407.t1 MTR_8g018510 80.240 334 66 0 182 515 536 869 0.0 580
MS.gene30407.t1 MTR_8g018510 74.000 100 26 0 83 182 265 364 1.15e-42 162
MS.gene30407.t1 MTR_8g018520 80.240 334 66 0 182 515 535 868 0.0 578
MS.gene30407.t1 MTR_8g018520 74.000 100 26 0 83 182 264 363 5.50e-42 160
MS.gene30407.t1 MTR_8g018650 77.177 333 76 0 183 515 475 807 0.0 555
MS.gene30407.t1 MTR_8g018620 77.844 334 73 1 182 515 475 807 0.0 552
MS.gene30407.t1 MTR_8g018590 71.598 338 95 1 178 515 487 823 7.17e-172 506
MS.gene30407.t1 MTR_2g099570 70.359 334 98 1 182 515 529 861 3.28e-167 495
MS.gene30407.t1 MTR_2g099570 59.406 101 40 1 83 182 257 357 5.14e-31 128
MS.gene30407.t1 MTR_8g018420 68.862 334 104 0 182 515 523 856 2.33e-166 493
MS.gene30407.t1 MTR_8g018420 60.606 99 39 0 84 182 253 351 2.44e-31 129
MS.gene30407.t1 MTR_8g018730 64.970 334 116 1 182 515 252 584 3.26e-160 468
MS.gene30407.t1 MTR_8g018730 53.750 80 36 1 104 182 2 81 9.18e-19 89.7
MS.gene30407.t1 MTR_2g099560 66.467 334 111 1 182 515 531 863 1.16e-158 473
MS.gene30407.t1 MTR_2g099560 46.108 167 82 3 18 182 201 361 1.14e-31 130
MS.gene30407.t1 MTR_3g081130 64.371 334 118 1 182 515 454 786 6.26e-157 466
MS.gene30407.t1 MTR_3g081130 52.727 110 46 2 73 182 178 281 1.83e-27 117
MS.gene30407.t1 MTR_8g018735 65.569 334 114 1 182 515 533 865 9.71e-157 468
MS.gene30407.t1 MTR_8g018735 44.571 175 90 4 10 182 193 362 5.86e-32 130
MS.gene30407.t1 MTR_8g018730 64.970 334 116 1 182 515 502 834 1.16e-156 467
MS.gene30407.t1 MTR_8g018730 51.515 99 19 1 84 182 262 331 5.13e-22 100
MS.gene30407.t1 MTR_8g018730 64.970 334 116 1 182 515 532 864 1.69e-156 468
MS.gene30407.t1 MTR_8g018730 61.000 100 38 1 84 182 262 361 2.14e-30 126
MS.gene30407.t1 MTR_3g081130 64.371 334 118 1 182 515 526 858 2.65e-156 467
MS.gene30407.t1 MTR_3g081130 52.727 110 46 2 73 182 250 353 1.94e-27 117
MS.gene30407.t1 MTR_5g024020 65.569 334 114 1 182 515 499 831 7.68e-156 465
MS.gene30407.t1 MTR_5g024020 44.079 152 81 2 32 182 216 364 6.14e-29 121
MS.gene30407.t1 MTR_5g024020 65.569 334 114 1 182 515 535 867 1.28e-155 465
MS.gene30407.t1 MTR_5g024020 44.079 152 81 2 32 182 216 364 5.71e-29 122
MS.gene30407.t1 MTR_7g113410 62.462 333 124 1 183 515 536 867 5.03e-151 453
MS.gene30407.t1 MTR_7g113410 44.000 100 51 2 85 181 265 362 2.43e-18 89.0
MS.gene30407.t1 MTR_1g104650 58.702 339 134 2 182 515 519 856 4.26e-144 435
MS.gene30407.t1 MTR_1g104650 47.059 102 48 2 85 182 248 347 2.07e-20 95.5
MS.gene30407.t1 MTR_1g083020 62.275 334 125 1 182 515 526 858 6.12e-144 435
MS.gene30407.t1 MTR_1g083020 48.515 101 47 2 85 182 256 354 2.40e-18 89.0
MS.gene30407.t1 MTR_8g020970 47.605 334 174 1 182 514 593 926 2.29e-107 341
MS.gene30407.t1 MTR_4g066170 47.633 338 172 4 182 515 570 906 2.43e-102 328
MS.gene30407.t1 MTR_8g080230 44.643 336 184 2 182 515 581 916 2.05e-98 317
MS.gene30407.t1 MTR_3g479460 45.994 337 178 3 182 515 568 903 3.01e-96 311
MS.gene30407.t1 MTR_3g079450 45.697 337 179 3 182 515 567 902 5.64e-96 311
MS.gene30407.t1 MTR_6g452500 43.750 320 177 2 182 498 286 605 9.70e-94 298
MS.gene30407.t1 MTR_4g088810 42.899 338 192 1 178 514 557 894 4.33e-92 300
MS.gene30407.t1 MTR_3g079420 46.588 337 176 3 182 515 530 865 1.25e-85 282
MS.gene30407.t1 MTR_8g011340 43.960 298 164 2 182 476 531 828 1.18e-84 279
MS.gene30407.t1 MTR_8g021025 98.387 62 1 0 21 82 68 129 1.85e-35 129
MS.gene30407.t1 MTR_7g012030 57.692 104 43 1 182 284 100 203 2.04e-32 123
MS.gene30407.t1 MTR_8g018735 44.571 175 90 4 10 182 193 362 5.61e-32 130
MS.gene30407.t1 MTR_8g018735 69.880 83 25 0 182 264 533 615 1.09e-30 126
MS.gene30407.t1 MTR_6g046330 57.692 104 43 1 182 284 101 204 3.35e-31 123
MS.gene30407.t1 MTR_3g079450 55.952 84 36 1 182 264 567 650 6.98e-21 96.7
MS.gene30407.t1 MTR_8g463810 36.420 162 59 3 141 300 238 357 1.60e-19 91.3
MS.gene30407.t1 MTR_8g020970 52.381 84 39 1 182 264 593 676 2.94e-19 91.7
MS.gene30407.t1 MTR_3g107560 29.204 226 100 8 292 515 7 174 2.96e-17 80.1
MS.gene30407.t1 MTR_4g088805 37.363 91 57 0 424 514 1 91 2.64e-15 71.6
MS.gene30407.t1 MTR_7g113408 42.857 63 35 1 407 469 8 69 6.51e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30407.t1 AT3G22400 59.882 339 130 2 182 515 549 886 4.03e-143 434
MS.gene30407.t1 AT3G22400 46.535 101 48 2 85 181 278 376 3.81e-19 91.7
MS.gene30407.t1 AT1G55020 58.383 334 137 2 183 515 527 859 4.56e-140 425
MS.gene30407.t1 AT1G55020 45.536 112 54 3 74 181 246 354 1.34e-19 93.2
MS.gene30407.t1 AT1G72520 46.567 335 178 1 182 515 592 926 7.52e-106 337
MS.gene30407.t1 AT1G17420 47.164 335 176 1 182 515 585 919 7.52e-104 332
MS.gene30407.t1 AT1G67560 44.776 335 183 2 183 515 583 917 7.34e-96 311
MS.gene30407.t1 AT3G45140 44.838 339 179 4 182 515 419 754 4.41e-94 302
MS.gene30407.t1 AT3G45140 44.838 339 179 4 182 515 561 896 4.54e-93 303

Find 120 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.137230 8.1:+78393039 MS.gene30407:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8.1:+78392899 MS.gene30407:CDS
AACCTTCCGCCGTCTGAATA+TGG 0.240508 8.1:-78389605 None:intergenic
AACTTCTTGTAGGCCTGTTT+TGG 0.254785 8.1:-78393309 None:intergenic
TTGAAGTCATCTGACTTTCT+TGG 0.278006 8.1:+78391707 MS.gene30407:CDS
CAAAAGTGCTTTCCATAAAA+AGG 0.284199 8.1:-78389822 None:intergenic
TATATACCTTGAACCACTTT+AGG 0.295558 8.1:-78391950 None:intergenic
CTTCTTTCCAAACTTCTTGT+AGG 0.296818 8.1:-78393319 None:intergenic
CTTCAGATGGACTAGAGATA+TGG 0.321694 8.1:+78392806 MS.gene30407:CDS
GTTCTTTGAACAACGGTATT+GGG 0.323229 8.1:-78391886 None:intergenic
CCGTTGTTGTTTACAAGGAT+TGG 0.336550 8.1:+78392366 MS.gene30407:CDS
AGTTCTTTGAACAACGGTAT+TGG 0.344989 8.1:-78391887 None:intergenic
AGGTGGGTCACGGTGACTTT+AGG 0.353909 8.1:+78392935 MS.gene30407:CDS
ACAACGGTATTGGGCTAATC+TGG 0.354078 8.1:-78391877 None:intergenic
TCTACTTATCCTTCTCGGTT+TGG 0.359316 8.1:+78389868 MS.gene30407:CDS
AAACAGGCCTACAAGAAGTT+TGG 0.372935 8.1:+78393312 MS.gene30407:CDS
TACTAACTTGACCATCTTAG+AGG 0.375663 8.1:+78393209 MS.gene30407:CDS
ATTTAGAGGAGTGGCAGTTC+AGG 0.377653 8.1:+78392732 MS.gene30407:intron
CATTCATCATAGCAACAAAT+AGG 0.380660 8.1:+78392192 MS.gene30407:CDS
AGAGAATCGAAGGCGATCTC+TGG 0.382540 8.1:+78393271 MS.gene30407:CDS
GAAGGATAAAGCATAGTATA+TGG 0.383500 8.1:-78393420 None:intergenic
TTGTTCTCAAATAAGTCTTC+TGG 0.383615 8.1:-78393164 None:intergenic
ACTTATCTACTTATCCTTCT+CGG 0.384698 8.1:+78389863 MS.gene30407:CDS
CTAAGATGGTCAAGTTAGTA+AGG 0.386613 8.1:-78393206 None:intergenic
GTTCCAAGAGATGAATCATT+TGG 0.391467 8.1:+78391680 MS.gene30407:CDS
TTCTGATTCACAGCCAAAAC+AGG 0.396436 8.1:+78393296 MS.gene30407:CDS
GGAAGTAAAAGTTTATGAAT+AGG 0.397518 8.1:-78392233 None:intergenic
TGACCAAATGATTCATCTCT+TGG 0.403299 8.1:-78391683 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.403413 8.1:-78392909 None:intergenic
AAGCTTGCACCATTCTCATA+TGG 0.416322 8.1:+78393004 MS.gene30407:CDS
GAAGTAAAAGTTTATGAATA+GGG 0.419737 8.1:-78392232 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8.1:-78392191 None:intergenic
GTCAATCCTTCCTCACTAGA+AGG 0.421532 8.1:-78393438 None:intergenic
CATCATTGTTCCTTTGAATG+AGG 0.423709 8.1:-78393362 None:intergenic
GTAGCTTTAGATCTCAAATT+CGG 0.426348 8.1:-78391764 None:intergenic
TAGGTTATTGAAACGGCTTA+AGG 0.428816 8.1:+78389732 MS.gene30407:intron
TTCCCTCGCACGAACTATCT+TGG 0.436377 8.1:+78392283 MS.gene30407:CDS
CGAACTATCTTGGTCAATGC+AGG 0.444666 8.1:+78392293 MS.gene30407:CDS
AATGTCCGTTGTTGTTTACA+AGG 0.450964 8.1:+78392361 MS.gene30407:CDS
GACACTGTTTGGAATGCCTC+TGG 0.455287 8.1:-78393463 None:intergenic
CAAGAAGTTTGGAAAGAAGT+TGG 0.456294 8.1:+78393323 MS.gene30407:CDS
TAAGTTTCCACCACCTAAAG+TGG 0.469195 8.1:+78391937 MS.gene30407:CDS
GAGACACTAAGGAATCGAAA+TGG 0.470257 8.1:+78393384 MS.gene30407:CDS
CCACCACCTAAAGTGGTTCA+AGG 0.472852 8.1:+78391944 MS.gene30407:CDS
TCTTCAAAGGTGTTAAACTC+AGG 0.476777 8.1:-78391803 None:intergenic
TATGGAATTAACTTTCTTGT+GGG 0.481371 8.1:+78392322 MS.gene30407:CDS
CTTTATCCTTCTAGTGAGGA+AGG 0.482064 8.1:+78393432 MS.gene30407:CDS
CGAACACCGTGTGGAGAAGC+TGG 0.482213 8.1:-78392757 None:intergenic
GAATATGGAGACCTTGCGGC+GGG 0.492635 8.1:-78389590 None:intergenic
TACCTAATGATCTAATCAAA+AGG 0.494750 8.1:+78392408 MS.gene30407:CDS
TCTAGTCCATCTGAAGCATA+AGG 0.496890 8.1:-78392799 None:intergenic
AGAAGATTCATGCCGGAGAA+AGG 0.500735 8.1:+78393108 MS.gene30407:CDS
TTCAGATGGACTAGAGATAT+GGG 0.502780 8.1:+78392807 MS.gene30407:CDS
AATATCTTAGGTTATTGAAA+CGG 0.511068 8.1:+78389725 MS.gene30407:intron
ATAGTATATGGCATCTTCAC+AGG 0.523061 8.1:-78393408 None:intergenic
CTTGATAATTTACATGAAGA+GGG 0.523231 8.1:-78389908 None:intergenic
TTATGGAATTAACTTTCTTG+TGG 0.523568 8.1:+78392321 MS.gene30407:CDS
GGAATTAAGCTTCCTACTGA+TGG 0.526828 8.1:+78391848 MS.gene30407:CDS
ACTTGATAATTTACATGAAG+AGG 0.529374 8.1:-78389909 None:intergenic
TACTCAACAGATCCTTTCTC+CGG 0.530427 8.1:-78393120 None:intergenic
GACTATCCTTATGCTTCAGA+TGG 0.531990 8.1:+78392793 MS.gene30407:CDS
CCTTGAACCACTTTAGGTGG+TGG 0.532735 8.1:-78391944 None:intergenic
GATTGGAATTTCATTGAGCA+AGG 0.534618 8.1:+78392383 MS.gene30407:CDS
GTGAAAGATCTTATTGAAGC+TGG 0.539200 8.1:+78389772 MS.gene30407:CDS
ATTTACATGAAGAGGGTTCG+AGG 0.539387 8.1:-78389901 None:intergenic
CGGTGTTCGACTTCTGATAG+AGG 0.542094 8.1:+78392771 MS.gene30407:CDS
CTTCAAAGGTGTTAAACTCA+GGG 0.545165 8.1:-78391802 None:intergenic
GCGTTGTTGAAAAGTTTCAA+TGG 0.549801 8.1:-78389800 None:intergenic
TGAAGAAATCCATATGAGAA+TGG 0.553542 8.1:-78393013 None:intergenic
TATGGGCTGCTATTAAGTCA+TGG 0.554200 8.1:+78392824 MS.gene30407:CDS
GTTTAAGATGCAAACTCGTA+CGG 0.554784 8.1:+78392972 MS.gene30407:CDS
GCTTCTGATGAGCAATACCT+TGG 0.555714 8.1:+78393246 MS.gene30407:CDS
CTCCATATTCAGACGGCGGA+AGG 0.556606 8.1:+78389603 MS.gene30407:CDS
CGCCTTCGATTCTCTCTCCA+AGG 0.560317 8.1:-78393263 None:intergenic
GGAACAATGATGAGACACTA+AGG 0.560598 8.1:+78393373 MS.gene30407:CDS
TGGAAAGAACTTGTCGAGGT+GGG 0.564734 8.1:+78392919 MS.gene30407:CDS
AACATGGCAGCCCCGCCGCA+AGG 0.566595 8.1:+78389579 None:intergenic
ATGGGCTGCTATTAAGTCAT+GGG 0.567374 8.1:+78392825 MS.gene30407:CDS
CCTTGACAAGACCTCTAAGA+TGG 0.567784 8.1:-78393220 None:intergenic
GAACTTGTCGAGGTGGGTCA+CGG 0.571260 8.1:+78392925 MS.gene30407:CDS
TTGCATGTTATTTAGAGGAG+TGG 0.572250 8.1:+78392723 MS.gene30407:intron
AAGGTTCAAACGGTGAGGCT+AGG 0.576644 8.1:+78389622 MS.gene30407:CDS
GAGAGAGCGTATATCTTCAA+AGG 0.581939 8.1:-78391816 None:intergenic
TACCTTGGAGAGAGAATCGA+AGG 0.586056 8.1:+78393261 MS.gene30407:CDS
ATACCTTGAACCACTTTAGG+TGG 0.590734 8.1:-78391947 None:intergenic
ATGGAATTAACTTTCTTGTG+GGG 0.591983 8.1:+78392323 MS.gene30407:CDS
GAACTATCTTGGTCAATGCA+GGG 0.592806 8.1:+78392294 MS.gene30407:CDS
TTGGAAAGAACTTGTCGAGG+TGG 0.593450 8.1:+78392918 MS.gene30407:CDS
CAGGATCCAGCTTCTCCACA+CGG 0.597050 8.1:+78392751 MS.gene30407:CDS
AACTATCTTGGTCAATGCAG+GGG 0.597411 8.1:+78392295 MS.gene30407:CDS
TTCATTGTGTCACGGTAGTG+TGG 0.599924 8.1:-78392254 None:intergenic
CAGACGGCGGAAGGTTCAAA+CGG 0.612212 8.1:+78389612 MS.gene30407:CDS
TAATCTGAACCAAACCGAGA+AGG 0.614730 8.1:-78389877 None:intergenic
AACAAATAGGCATCTTAGTG+TGG 0.616014 8.1:+78392205 MS.gene30407:CDS
TTTGGACAATATGCGTATGG+AGG 0.620897 8.1:+78393057 MS.gene30407:CDS
ATACGCTCTCTCTACGATGG+TGG 0.622802 8.1:+78391827 MS.gene30407:CDS
GACCAAGATAGTTCGTGCGA+GGG 0.624194 8.1:-78392285 None:intergenic
AATTTATGTTCATTGTGTCA+CGG 0.625058 8.1:-78392262 None:intergenic
TAAGATGGTCAAGTTAGTAA+GGG 0.628721 8.1:-78393205 None:intergenic
TGAGTATGATGAGCTTGCTA+AGG 0.630344 8.1:+78393137 MS.gene30407:CDS
TGACCAAGATAGTTCGTGCG+AGG 0.632710 8.1:-78392286 None:intergenic
ATCAGAAGTCGAACACCGTG+TGG 0.634779 8.1:-78392766 None:intergenic
TATGCTTTATCCTTCTAGTG+AGG 0.636753 8.1:+78393428 MS.gene30407:CDS
TGAATATGGAGACCTTGCGG+CGG 0.640070 8.1:-78389591 None:intergenic
TAGATAAGTTAACACCAAGA+GGG 0.640424 8.1:-78389849 None:intergenic
AGTAAGGGTATCATTCTTCG+CGG 0.640434 8.1:-78393190 None:intergenic
GTAGATAAGTTAACACCAAG+AGG 0.647293 8.1:-78389850 None:intergenic
GAGGAAGGATTGACTTCCAG+AGG 0.652376 8.1:+78393447 MS.gene30407:CDS
GCAAGGTCTCCATATTCAGA+CGG 0.653088 8.1:+78389596 MS.gene30407:CDS
CCATCTTAGAGGTCTTGTCA+AGG 0.657473 8.1:+78393220 MS.gene30407:CDS
CCAATCCTTGTAAACAACAA+CGG 0.661100 8.1:-78392366 None:intergenic
GTCTGAATATGGAGACCTTG+CGG 0.668375 8.1:-78389594 None:intergenic
GGCGGAAGGTTCAAACGGTG+AGG 0.671562 8.1:+78389617 MS.gene30407:CDS
GATATACGCTCTCTCTACGA+TGG 0.675831 8.1:+78391824 MS.gene30407:CDS
ACTATCTTGGTCAATGCAGG+GGG 0.677836 8.1:+78392296 MS.gene30407:CDS
ATCTGGCTTAGTCCATCAGT+AGG 0.685227 8.1:-78391860 None:intergenic
GTGACTTTAGGAATGCAACA+TGG 0.693429 8.1:+78392947 MS.gene30407:CDS
ACTTTAGGAATGCAACATGG+TGG 0.698879 8.1:+78392950 MS.gene30407:CDS
AATATGGAGACCTTGCGGCG+GGG 0.701594 8.1:-78389589 None:intergenic
AGGTCTCCATATTCAGACGG+CGG 0.717616 8.1:+78389599 MS.gene30407:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGATTAAAGTTAAAAAT+TGG + chr8.1:78390671-78390690 MS.gene30407:intron 10.0%
!!! ACATTTTATAATAAAGAAAA+AGG - chr8.1:78390009-78390028 None:intergenic 10.0%
!! ATTAAAGTTAAAAATTGGTT+AGG + chr8.1:78390676-78390695 MS.gene30407:intron 15.0%
!! CAATATTACAAAAACAAAAT+TGG - chr8.1:78392680-78392699 None:intergenic 15.0%
!! GAAAAAATAAAAGCAATAAA+AGG - chr8.1:78390040-78390059 None:intergenic 15.0%
!! GAAATGTAAAAACAAAAAAA+AGG - chr8.1:78390150-78390169 None:intergenic 15.0%
!! TCAAATAAACCAAAAAAAAA+AGG + chr8.1:78391544-78391563 MS.gene30407:intron 15.0%
!! TTAAAGTTAAAAATTGGTTA+GGG + chr8.1:78390677-78390696 MS.gene30407:intron 15.0%
!!! AATTTTTATCTTTCATTTCT+AGG + chr8.1:78390238-78390257 MS.gene30407:intron 15.0%
!!! ACTAACTTTTATATTTCTAT+TGG + chr8.1:78392574-78392593 MS.gene30407:intron 15.0%
!!! TCAATATCTTTTTAGAAAAA+TGG - chr8.1:78392456-78392475 None:intergenic 15.0%
!! AAGAAAAAGGAAAGAAAATA+AGG - chr8.1:78389996-78390015 None:intergenic 20.0%
!! AATATCTTAGGTTATTGAAA+CGG + chr8.1:78389725-78389744 MS.gene30407:intron 20.0%
!! AATGTTGAAGCTAATAATAT+GGG + chr8.1:78390882-78390901 MS.gene30407:intron 20.0%
!! ACCTAAAATTAAAATCACAA+GGG - chr8.1:78390065-78390084 None:intergenic 20.0%
!! AGATAAAATTTATACCGTTT+AGG + chr8.1:78390412-78390431 MS.gene30407:intron 20.0%
!! AGTTTGAACAATTACAAAAA+TGG - chr8.1:78391014-78391033 None:intergenic 20.0%
!! ATTAATGAAATTCATACCAA+TGG - chr8.1:78392070-78392089 None:intergenic 20.0%
!! CCTAAAAATAAATTAAGTCA+GGG + chr8.1:78391991-78392010 MS.gene30407:intron 20.0%
!! GAAGTAAAAGTTTATGAATA+GGG - chr8.1:78392235-78392254 None:intergenic 20.0%
!! TAATACCCAAAATGAATTAT+GGG + chr8.1:78390628-78390647 MS.gene30407:intron 20.0%
!! TACCTAAAATTAAAATCACA+AGG - chr8.1:78390066-78390085 None:intergenic 20.0%
!! TTAATACCCAAAATGAATTA+TGG + chr8.1:78390627-78390646 MS.gene30407:intron 20.0%
!! TTTATTGTATTGTTATCACT+TGG - chr8.1:78391176-78391195 None:intergenic 20.0%
!!! ATATTTTTGTAATGTTCATG+AGG + chr8.1:78392484-78392503 MS.gene30407:intron 20.0%
!!! ATTTTTCCCATAATTCATTT+TGG - chr8.1:78390637-78390656 None:intergenic 20.0%
!!! CCTGACTTAATTTATTTTTA+GGG - chr8.1:78391993-78392012 None:intergenic 20.0%
!!! CTTAATTTTGAAATGGAATT+TGG - chr8.1:78391504-78391523 None:intergenic 20.0%
!!! TAATTTTAGGTAAATTGTGA+GGG + chr8.1:78390074-78390093 MS.gene30407:intron 20.0%
!!! TATGAATGTTCTTGTTTATT+GGG + chr8.1:78390121-78390140 MS.gene30407:intron 20.0%
!!! TTAATTTTAGGTAAATTGTG+AGG + chr8.1:78390073-78390092 MS.gene30407:intron 20.0%
!!! TTAGTTAGAGTTTGTTATTA+GGG - chr8.1:78392559-78392578 None:intergenic 20.0%
!!! TTTTTCCCATAATTCATTTT+GGG - chr8.1:78390636-78390655 None:intergenic 20.0%
! AATTTATGTTCATTGTGTCA+CGG - chr8.1:78392265-78392284 None:intergenic 25.0%
! ACAAAAACAAAATTGGAGAA+GGG - chr8.1:78392673-78392692 None:intergenic 25.0%
! AGTAATTGTGTTAATTGTGT+TGG + chr8.1:78391601-78391620 MS.gene30407:intron 25.0%
! CAATGTTGAAGCTAATAATA+TGG + chr8.1:78390881-78390900 MS.gene30407:intron 25.0%
! CCCTAAAAATAAATTAAGTC+AGG + chr8.1:78391990-78392009 MS.gene30407:intron 25.0%
! CCTAAAATTAAAATCACAAG+GGG - chr8.1:78390064-78390083 None:intergenic 25.0%
! GCATAGTTAGAATGTTTAAA+AGG + chr8.1:78389677-78389696 MS.gene30407:intron 25.0%
! GGAAGTAAAAGTTTATGAAT+AGG - chr8.1:78392236-78392255 None:intergenic 25.0%
! TACAAAAACAAAATTGGAGA+AGG - chr8.1:78392674-78392693 None:intergenic 25.0%
! TACCTAATGATCTAATCAAA+AGG + chr8.1:78392408-78392427 MS.gene30407:CDS 25.0%
! TATATATCTCAATGTTTGAC+AGG + chr8.1:78392144-78392163 MS.gene30407:intron 25.0%
! TATGGAATTAACTTTCTTGT+GGG + chr8.1:78392322-78392341 MS.gene30407:CDS 25.0%
! TCTTTGTGAGAAAACAATAT+AGG + chr8.1:78390289-78390308 MS.gene30407:intron 25.0%
! TGCATGTATATAAGAAGAAA+AGG + chr8.1:78389958-78389977 MS.gene30407:intron 25.0%
! TTATGGAATTAACTTTCTTG+TGG + chr8.1:78392321-78392340 MS.gene30407:CDS 25.0%
!! ACTTGATAATTTACATGAAG+AGG - chr8.1:78389912-78389931 None:intergenic 25.0%
!! CTATGAATGTTCTTGTTTAT+TGG + chr8.1:78390120-78390139 MS.gene30407:intron 25.0%
!! CTTGATAATTTACATGAAGA+GGG - chr8.1:78389911-78389930 None:intergenic 25.0%
!! CTTTTCACGTTAACATTAAT+GGG + chr8.1:78390594-78390613 MS.gene30407:intron 25.0%
!! GAGTCTAAGCATTATATTTT+TGG + chr8.1:78390524-78390543 MS.gene30407:intron 25.0%
!! GCAAGTAGATTTTATTACTT+TGG + chr8.1:78390361-78390380 MS.gene30407:intron 25.0%
!! TATCACTTGGTTATTTCAAA+TGG - chr8.1:78391163-78391182 None:intergenic 25.0%
!! TCTTTTCACGTTAACATTAA+TGG + chr8.1:78390593-78390612 MS.gene30407:intron 25.0%
!! TTGGTTATTTCAAATGGTAT+AGG - chr8.1:78391157-78391176 None:intergenic 25.0%
!! TTTTATTACTTTGGCTAGAT+AGG + chr8.1:78390370-78390389 MS.gene30407:intron 25.0%
!! TTTTGTAATTGTTCAAACTC+AGG + chr8.1:78391015-78391034 MS.gene30407:intron 25.0%
!!! AGGTTCAAGTTTGTTTTTAT+GGG + chr8.1:78390258-78390277 MS.gene30407:intron 25.0%
!!! ATGAATCTTCTACTTTTTGT+TGG - chr8.1:78393099-78393118 None:intergenic 25.0%
!!! CCCTGACTTAATTTATTTTT+AGG - chr8.1:78391994-78392013 None:intergenic 25.0%
!!! GTTAGTTAGAGTTTGTTATT+AGG - chr8.1:78392560-78392579 None:intergenic 25.0%
!!! TACCTTTTGATTAGATCATT+AGG - chr8.1:78392413-78392432 None:intergenic 25.0%
!!! TAGGTTCAAGTTTGTTTTTA+TGG + chr8.1:78390257-78390276 MS.gene30407:intron 25.0%
!!! TCATTTTACTACTGTTTTAG+AGG - chr8.1:78392614-78392633 None:intergenic 25.0%
!!! TTTCTCACTCACTTTTTATT+AGG + chr8.1:78391073-78391092 MS.gene30407:intron 25.0%
AAAAAGTAGAAGATTCATGC+CGG + chr8.1:78393101-78393120 MS.gene30407:CDS 30.0%
AAAAGGTAACCTTACATCTT+GGG + chr8.1:78392425-78392444 MS.gene30407:intron 30.0%
AAGTGGTTCAAGGTATATAT+TGG + chr8.1:78391954-78391973 MS.gene30407:intron 30.0%
AAGTTAAAAATTGGTTAGGG+AGG + chr8.1:78390680-78390699 MS.gene30407:intron 30.0%
ACTTATCTACTTATCCTTCT+CGG + chr8.1:78389863-78389882 MS.gene30407:CDS 30.0%
AGATAGGAGATATTCTTGTA+TGG + chr8.1:78390386-78390405 MS.gene30407:intron 30.0%
ATGGAATTAACTTTCTTGTG+GGG + chr8.1:78392323-78392342 MS.gene30407:CDS 30.0%
ATTACAAAGACACACAACAT+AGG + chr8.1:78391257-78391276 MS.gene30407:intron 30.0%
CATTCATCATAGCAACAAAT+AGG + chr8.1:78392192-78392211 MS.gene30407:CDS 30.0%
CGAAAAAGTTCTTTGAACAA+CGG - chr8.1:78391896-78391915 None:intergenic 30.0%
CTATACGTAAGTTTCAATTC+TGG + chr8.1:78390818-78390837 MS.gene30407:intron 30.0%
CTGAGAGGTGAAAAAATATA+TGG - chr8.1:78390189-78390208 None:intergenic 30.0%
GAAGGATAAAGCATAGTATA+TGG - chr8.1:78393423-78393442 None:intergenic 30.0%
GGCTTAAGTTACAATATCTT+AGG + chr8.1:78389713-78389732 MS.gene30407:intron 30.0%
GTAATTTCAGATAGGTAGTT+TGG - chr8.1:78391242-78391261 None:intergenic 30.0%
GTGAGTCAATATTTGTTTGA+TGG + chr8.1:78390754-78390773 MS.gene30407:intron 30.0%
GTGTCTTTGTAATTTCAGAT+AGG - chr8.1:78391250-78391269 None:intergenic 30.0%
TAAGATGGTCAAGTTAGTAA+GGG - chr8.1:78393208-78393227 None:intergenic 30.0%
TAGATAAGTTAACACCAAGA+GGG - chr8.1:78389852-78389871 None:intergenic 30.0%
TATATACCTTGAACCACTTT+AGG - chr8.1:78391953-78391972 None:intergenic 30.0%
TATCTTATTGTGTGCCTAAA+CGG - chr8.1:78390429-78390448 None:intergenic 30.0%
TCAGTCTCTAATATTGTTCA+TGG + chr8.1:78390205-78390224 MS.gene30407:intron 30.0%
TGAAATGGAATTTGGATCTT+TGG - chr8.1:78391496-78391515 None:intergenic 30.0%
TGAAGAAATCCATATGAGAA+TGG - chr8.1:78393016-78393035 None:intergenic 30.0%
TTGTTCTCAAATAAGTCTTC+TGG - chr8.1:78393167-78393186 None:intergenic 30.0%
! AATTTTGGACAATATGCGTA+TGG + chr8.1:78393054-78393073 MS.gene30407:CDS 30.0%
! AGAGAAGTCTAATCCTTTTA+GGG - chr8.1:78391469-78391488 None:intergenic 30.0%
! CATATTTTTCATACTGCAGA+TGG - chr8.1:78390340-78390359 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG - chr8.1:78392194-78392213 None:intergenic 30.0%
! GTGCATTTGATCAATTTTGA+AGG - chr8.1:78391220-78391239 None:intergenic 30.0%
! TAGAGAAGTCTAATCCTTTT+AGG - chr8.1:78391470-78391489 None:intergenic 30.0%
! TTTTCAACAACGCCTTTTTA+TGG + chr8.1:78389810-78389829 MS.gene30407:CDS 30.0%
!! AACCAAAAAAAAAAGGCACT+AGG + chr8.1:78391551-78391570 MS.gene30407:intron 30.0%
!! ACCAAAAAAAAAAGGCACTA+GGG + chr8.1:78391552-78391571 MS.gene30407:intron 30.0%
!! ATTGTGAGGGAGTTATTTTA+AGG + chr8.1:78390087-78390106 MS.gene30407:intron 30.0%
!! CAAAAGTGCTTTCCATAAAA+AGG - chr8.1:78389825-78389844 None:intergenic 30.0%
!! CAGCTGTCTTAATTTTGAAA+TGG - chr8.1:78391511-78391530 None:intergenic 30.0%
!! GTAGCTTTAGATCTCAAATT+CGG - chr8.1:78391767-78391786 None:intergenic 30.0%
!!! AAAGAACTTTTTCGAACTGA+TGG + chr8.1:78391902-78391921 MS.gene30407:CDS 30.0%
!!! ATCTTCTACTTTTTGTTGGT+CGG - chr8.1:78393095-78393114 None:intergenic 30.0%
!!! CCCCTTGTGATTTTAATTTT+AGG + chr8.1:78390061-78390080 MS.gene30407:intron 30.0%
!!! TTGTGAGGGAGTTATTTTAA+GGG + chr8.1:78390088-78390107 MS.gene30407:intron 30.0%
AACAAATAGGCATCTTAGTG+TGG + chr8.1:78392205-78392224 MS.gene30407:CDS 35.0%
ACTCCTCTAAATAACATGCA+AGG - chr8.1:78392724-78392743 None:intergenic 35.0%
AGTTCTTTGAACAACGGTAT+TGG - chr8.1:78391890-78391909 None:intergenic 35.0%
ATAGTATATGGCATCTTCAC+AGG - chr8.1:78393411-78393430 None:intergenic 35.0%
CAAAAGGTAACCTTACATCT+TGG + chr8.1:78392424-78392443 MS.gene30407:intron 35.0%
CAAGAAGTTTGGAAAGAAGT+TGG + chr8.1:78393323-78393342 MS.gene30407:CDS 35.0%
CAAGTTCTTTCCAAAATGCT+TGG - chr8.1:78392912-78392931 None:intergenic 35.0%
CATCATTGTTCCTTTGAATG+AGG - chr8.1:78393365-78393384 None:intergenic 35.0%
CCAATCCTTGTAAACAACAA+CGG - chr8.1:78392369-78392388 None:intergenic 35.0%
CGTGATTGTGACACTAAAAT+CGG + chr8.1:78390856-78390875 MS.gene30407:intron 35.0%
CTAAGATGGTCAAGTTAGTA+AGG - chr8.1:78393209-78393228 None:intergenic 35.0%
CTTCTTTCCAAACTTCTTGT+AGG - chr8.1:78393322-78393341 None:intergenic 35.0%
GAACAATATTAGAGACTGAG+AGG - chr8.1:78390204-78390223 None:intergenic 35.0%
GATTGGAATTTCATTGAGCA+AGG + chr8.1:78392383-78392402 MS.gene30407:CDS 35.0%
GCGTTGTTGAAAAGTTTCAA+TGG - chr8.1:78389803-78389822 None:intergenic 35.0%
GTAGATAAGTTAACACCAAG+AGG - chr8.1:78389853-78389872 None:intergenic 35.0%
GTGAAAGATCTTATTGAAGC+TGG + chr8.1:78389772-78389791 MS.gene30407:CDS 35.0%
GTTCCAAGAGATGAATCATT+TGG + chr8.1:78391680-78391699 MS.gene30407:CDS 35.0%
GTTCTTTGAACAACGGTATT+GGG - chr8.1:78391889-78391908 None:intergenic 35.0%
TACTAACTTGACCATCTTAG+AGG + chr8.1:78393209-78393228 MS.gene30407:CDS 35.0%
TAGGTGATAGTAACATTCTC+TGG - chr8.1:78391138-78391157 None:intergenic 35.0%
TAGGTTATTGAAACGGCTTA+AGG + chr8.1:78389732-78389751 MS.gene30407:intron 35.0%
TATGCTTTATCCTTCTAGTG+AGG + chr8.1:78393428-78393447 MS.gene30407:CDS 35.0%
TCGAGAAAAACCTCATTCAA+AGG + chr8.1:78393352-78393371 MS.gene30407:CDS 35.0%
TGACCAAATGATTCATCTCT+TGG - chr8.1:78391686-78391705 None:intergenic 35.0%
TTAAAAGGATGCGTGTAAAG+TGG + chr8.1:78389692-78389711 MS.gene30407:intron 35.0%
TTGAAGTCATCTGACTTTCT+TGG + chr8.1:78391707-78391726 MS.gene30407:CDS 35.0%
! AATGCTGAAGCAGTTTTCAT+TGG - chr8.1:78390920-78390939 None:intergenic 35.0%
! AGAAGTCTAATCCTTTTAGG+GGG - chr8.1:78391467-78391486 None:intergenic 35.0%
! ATTCTGAACTCCAAGCATTT+TGG + chr8.1:78392899-78392918 MS.gene30407:CDS 35.0%
! CTTCATGCAGCTGTTAATTT+TGG + chr8.1:78393039-78393058 MS.gene30407:CDS 35.0%
! CTTCCTTGCATGTTATTTAG+AGG + chr8.1:78392718-78392737 MS.gene30407:intron 35.0%
! GAGAAGTCTAATCCTTTTAG+GGG - chr8.1:78391468-78391487 None:intergenic 35.0%
! GTTTAAGATGCAAACTCGTA+CGG + chr8.1:78392972-78392991 MS.gene30407:CDS 35.0%
! TTGCATGTTATTTAGAGGAG+TGG + chr8.1:78392723-78392742 MS.gene30407:intron 35.0%
!! AATGTCCGTTGTTGTTTACA+AGG + chr8.1:78392361-78392380 MS.gene30407:CDS 35.0%
!! ATAAGTTGATTCCCCCTAAA+AGG + chr8.1:78391453-78391472 MS.gene30407:intron 35.0%
!! ATTTTGGAAAGAACTTGTCG+AGG + chr8.1:78392915-78392934 MS.gene30407:CDS 35.0%
!! CTTCAAAGGTGTTAAACTCA+GGG - chr8.1:78391805-78391824 None:intergenic 35.0%
!! GAATAGACTTCTGGTCTTAT+TGG + chr8.1:78390726-78390745 MS.gene30407:intron 35.0%
!! TACTTTTTGTTGGTCGGTTA+AGG - chr8.1:78393089-78393108 None:intergenic 35.0%
!! TCTTCAAAGGTGTTAAACTC+AGG - chr8.1:78391806-78391825 None:intergenic 35.0%
!! TTCAGATGGACTAGAGATAT+GGG + chr8.1:78392807-78392826 MS.gene30407:CDS 35.0%
!!! TCCCTAGTGCCTTTTTTTTT+TGG - chr8.1:78391556-78391575 None:intergenic 35.0%
!!! TGTGAGGGAGTTATTTTAAG+GGG + chr8.1:78390089-78390108 MS.gene30407:intron 35.0%
!!! TTATTTTTCGAGTGTCGTCT+TGG - chr8.1:78391437-78391456 None:intergenic 35.0%
AAACAGGCCTACAAGAAGTT+TGG + chr8.1:78393312-78393331 MS.gene30407:CDS 40.0%
AACTATCTTGGTCAATGCAG+GGG + chr8.1:78392295-78392314 MS.gene30407:CDS 40.0%
AAGCTTGCACCATTCTCATA+TGG + chr8.1:78393004-78393023 MS.gene30407:CDS 40.0%
ACAAACTGAGAAAGCCATGT+TGG + chr8.1:78391312-78391331 MS.gene30407:intron 40.0%
ATACCTTGAACCACTTTAGG+TGG - chr8.1:78391950-78391969 None:intergenic 40.0%
ATCGTGACTGAATAGACTTC+TGG + chr8.1:78390717-78390736 MS.gene30407:intron 40.0%
ATTTACATGAAGAGGGTTCG+AGG - chr8.1:78389904-78389923 None:intergenic 40.0%
CAAACTGAGAAAGCCATGTT+GGG + chr8.1:78391313-78391332 MS.gene30407:intron 40.0%
CTTTATCCTTCTAGTGAGGA+AGG + chr8.1:78393432-78393451 MS.gene30407:CDS 40.0%
GAACTATCTTGGTCAATGCA+GGG + chr8.1:78392294-78392313 MS.gene30407:CDS 40.0%
GACTATCCTTATGCTTCAGA+TGG + chr8.1:78392793-78392812 MS.gene30407:CDS 40.0%
GAGACACTAAGGAATCGAAA+TGG + chr8.1:78393384-78393403 MS.gene30407:CDS 40.0%
GGAACAATGATGAGACACTA+AGG + chr8.1:78393373-78393392 MS.gene30407:CDS 40.0%
GGAATTAAGCTTCCTACTGA+TGG + chr8.1:78391848-78391867 MS.gene30407:CDS 40.0%
GGGCAAACGAAGAAAAAGAA+AGG + chr8.1:78391364-78391383 MS.gene30407:intron 40.0%
TAAGTTTCCACCACCTAAAG+TGG + chr8.1:78391937-78391956 MS.gene30407:CDS 40.0%
TAATCTGAACCAAACCGAGA+AGG - chr8.1:78389880-78389899 None:intergenic 40.0%
TACTCAACAGATCCTTTCTC+CGG - chr8.1:78393123-78393142 None:intergenic 40.0%
TATCTCCATCCTTTCCTGAT+AGG - chr8.1:78391411-78391430 None:intergenic 40.0%
TCTACTTATCCTTCTCGGTT+TGG + chr8.1:78389868-78389887 MS.gene30407:CDS 40.0%
TTACCACTGAGAATCTGAGA+TGG - chr8.1:78392512-78392531 None:intergenic 40.0%
TTCTGATTCACAGCCAAAAC+AGG + chr8.1:78393296-78393315 MS.gene30407:CDS 40.0%
TTTGGACAATATGCGTATGG+AGG + chr8.1:78393057-78393076 MS.gene30407:CDS 40.0%
! AACTTCTTGTAGGCCTGTTT+TGG - chr8.1:78393312-78393331 None:intergenic 40.0%
! ACTTTAGGAATGCAACATGG+TGG + chr8.1:78392950-78392969 MS.gene30407:CDS 40.0%
! ATGGGCTGCTATTAAGTCAT+GGG + chr8.1:78392825-78392844 MS.gene30407:CDS 40.0%
! GAGAGAGCGTATATCTTCAA+AGG - chr8.1:78391819-78391838 None:intergenic 40.0%
! GTGACTTTAGGAATGCAACA+TGG + chr8.1:78392947-78392966 MS.gene30407:CDS 40.0%
! TATGGGCTGCTATTAAGTCA+TGG + chr8.1:78392824-78392843 MS.gene30407:CDS 40.0%
! TCTAGTCCATCTGAAGCATA+AGG - chr8.1:78392802-78392821 None:intergenic 40.0%
!! AGTAAGGGTATCATTCTTCG+CGG - chr8.1:78393193-78393212 None:intergenic 40.0%
!! CCGTTGTTGTTTACAAGGAT+TGG + chr8.1:78392366-78392385 MS.gene30407:CDS 40.0%
!! CTTCAGATGGACTAGAGATA+TGG + chr8.1:78392806-78392825 MS.gene30407:CDS 40.0%
!! TGAGTATGATGAGCTTGCTA+AGG + chr8.1:78393137-78393156 MS.gene30407:CDS 40.0%
!! TTTTCGAACTGATGGTGAAG+CGG + chr8.1:78391910-78391929 MS.gene30407:CDS 40.0%
AAACCACGGCGGAGATTAAT+TGG + chr8.1:78389652-78389671 MS.gene30407:intron 45.0%
ACTATCTTGGTCAATGCAGG+GGG + chr8.1:78392296-78392315 MS.gene30407:CDS 45.0%
AGAAAGCCATGTTGGGATCT+CGG + chr8.1:78391320-78391339 MS.gene30407:intron 45.0%
AGAAGATTCATGCCGGAGAA+AGG + chr8.1:78393108-78393127 MS.gene30407:CDS 45.0%
ATCACCAACTTGTCAGCCAT+TGG + chr8.1:78392051-78392070 MS.gene30407:intron 45.0%
ATTGGTTAGGGAGGTGAACA+AGG + chr8.1:78390689-78390708 MS.gene30407:intron 45.0%
ATTTAGAGGAGTGGCAGTTC+AGG + chr8.1:78392732-78392751 MS.gene30407:intron 45.0%
CATACCAATGGCTGACAAGT+TGG - chr8.1:78392058-78392077 None:intergenic 45.0%
CGAACTATCTTGGTCAATGC+AGG + chr8.1:78392293-78392312 MS.gene30407:CDS 45.0%
GAGTGCAGCAGTTCAGTAAA+TGG - chr8.1:78390970-78390989 None:intergenic 45.0%
GATATACGCTCTCTCTACGA+TGG + chr8.1:78391824-78391843 MS.gene30407:CDS 45.0%
GCAAGGTCTCCATATTCAGA+CGG + chr8.1:78389596-78389615 MS.gene30407:CDS 45.0%
GCAGTAGATAGTGTCTTGTG+TGG - chr8.1:78390558-78390577 None:intergenic 45.0%
GCTTCTGATGAGCAATACCT+TGG + chr8.1:78393246-78393265 MS.gene30407:CDS 45.0%
GTCAATCCTTCCTCACTAGA+AGG - chr8.1:78393441-78393460 None:intergenic 45.0%
GTCTGAATATGGAGACCTTG+CGG - chr8.1:78389597-78389616 None:intergenic 45.0%
TACCTTGGAGAGAGAATCGA+AGG + chr8.1:78393261-78393280 MS.gene30407:CDS 45.0%
TGGAAAGAACTTGTCGAGGT+GGG + chr8.1:78392919-78392938 MS.gene30407:CDS 45.0%
TTCATTGTGTCACGGTAGTG+TGG - chr8.1:78392257-78392276 None:intergenic 45.0%
TTGGAAAGAACTTGTCGAGG+TGG + chr8.1:78392918-78392937 MS.gene30407:CDS 45.0%
! ACAACGGTATTGGGCTAATC+TGG - chr8.1:78391880-78391899 None:intergenic 45.0%
! ATCTGGCTTAGTCCATCAGT+AGG - chr8.1:78391863-78391882 None:intergenic 45.0%
! ATGGACTGACCCAAGATGTA+AGG - chr8.1:78392437-78392456 None:intergenic 45.0%
! CCATCTTAGAGGTCTTGTCA+AGG + chr8.1:78393220-78393239 MS.gene30407:CDS 45.0%
! CCTTGACAAGACCTCTAAGA+TGG - chr8.1:78393223-78393242 None:intergenic 45.0%
! TTCTTTTACCGCAGCCTATC+AGG + chr8.1:78391394-78391413 MS.gene30407:intron 45.0%
!!! TGCTGCTTTTTGTGAAGTGC+AGG - chr8.1:78391289-78391308 None:intergenic 45.0%
AACCTTCCGCCGTCTGAATA+TGG - chr8.1:78389608-78389627 None:intergenic 50.0%
AAGGTTCAAACGGTGAGGCT+AGG + chr8.1:78389622-78389641 MS.gene30407:CDS 50.0%
AGAGAATCGAAGGCGATCTC+TGG + chr8.1:78393271-78393290 MS.gene30407:CDS 50.0%
AGGTCTCCATATTCAGACGG+CGG + chr8.1:78389599-78389618 MS.gene30407:CDS 50.0%
ATACGCTCTCTCTACGATGG+TGG + chr8.1:78391827-78391846 MS.gene30407:CDS 50.0%
ATCAGAAGTCGAACACCGTG+TGG - chr8.1:78392769-78392788 None:intergenic 50.0%
CATCCTTTCCTGATAGGCTG+CGG - chr8.1:78391405-78391424 None:intergenic 50.0%
CCACCACCTAAAGTGGTTCA+AGG + chr8.1:78391944-78391963 MS.gene30407:CDS 50.0%
CCTTGAACCACTTTAGGTGG+TGG - chr8.1:78391947-78391966 None:intergenic 50.0%
CGGTGTTCGACTTCTGATAG+AGG + chr8.1:78392771-78392790 MS.gene30407:CDS 50.0%
GACCAAGATAGTTCGTGCGA+GGG - chr8.1:78392288-78392307 None:intergenic 50.0%
GCTTGTGCTTGTTTGTGCGT+TGG + chr8.1:78390789-78390808 MS.gene30407:intron 50.0%
GGCTAGGTAGCAAGAAACCA+CGG + chr8.1:78389638-78389657 MS.gene30407:intron 50.0%
GTGCCATCTCAGATTCTCAG+TGG + chr8.1:78392506-78392525 MS.gene30407:intron 50.0%
GTGCTTGTTTGTGCGTTGGA+AGG + chr8.1:78390793-78390812 MS.gene30407:intron 50.0%
GTTTGCCCGCTAGTTGTTTG+TGG - chr8.1:78391352-78391371 None:intergenic 50.0%
TAGGTAGCAAGAAACCACGG+CGG + chr8.1:78389641-78389660 MS.gene30407:intron 50.0%
TCCCTGCCACAAACAACTAG+CGG + chr8.1:78391343-78391362 MS.gene30407:intron 50.0%
TGAATATGGAGACCTTGCGG+CGG - chr8.1:78389594-78389613 None:intergenic 50.0%
TGACCAAGATAGTTCGTGCG+AGG - chr8.1:78392289-78392308 None:intergenic 50.0%
TTACCGCAGCCTATCAGGAA+AGG + chr8.1:78391399-78391418 MS.gene30407:intron 50.0%
TTCCCTCGCACGAACTATCT+TGG + chr8.1:78392283-78392302 MS.gene30407:CDS 50.0%
! GACACTGTTTGGAATGCCTC+TGG - chr8.1:78393466-78393485 None:intergenic 50.0%
! GAGGAAGGATTGACTTCCAG+AGG + chr8.1:78393447-78393466 MS.gene30407:CDS 50.0%
!! AGCACTTTTGCTGTCCCTCT+TGG + chr8.1:78389835-78389854 MS.gene30407:CDS 50.0%
AATATGGAGACCTTGCGGCG+GGG - chr8.1:78389592-78389611 None:intergenic 55.0%
AGGTGGGTCACGGTGACTTT+AGG + chr8.1:78392935-78392954 MS.gene30407:CDS 55.0%
CAGACGGCGGAAGGTTCAAA+CGG + chr8.1:78389612-78389631 MS.gene30407:CDS 55.0%
CAGGATCCAGCTTCTCCACA+CGG + chr8.1:78392751-78392770 MS.gene30407:CDS 55.0%
CCACCAATTAATCTCCGCCG+TGG - chr8.1:78389658-78389677 None:intergenic 55.0%
CCACGGCGGAGATTAATTGG+TGG + chr8.1:78389655-78389674 MS.gene30407:intron 55.0%
CCCGCTAGTTGTTTGTGGCA+GGG - chr8.1:78391347-78391366 None:intergenic 55.0%
CCCTGCCACAAACAACTAGC+GGG + chr8.1:78391344-78391363 MS.gene30407:intron 55.0%
CGCAGCCTATCAGGAAAGGA+TGG + chr8.1:78391403-78391422 MS.gene30407:intron 55.0%
CGCCTTCGATTCTCTCTCCA+AGG - chr8.1:78393266-78393285 None:intergenic 55.0%
CTCCATATTCAGACGGCGGA+AGG + chr8.1:78389603-78389622 MS.gene30407:CDS 55.0%
GAACTTGTCGAGGTGGGTCA+CGG + chr8.1:78392925-78392944 MS.gene30407:CDS 55.0%
GAATATGGAGACCTTGCGGC+GGG - chr8.1:78389593-78389612 None:intergenic 55.0%
!! GGTCAATGCAGGGGGTGTTA+TGG + chr8.1:78392304-78392323 MS.gene30407:CDS 55.0%
CAGGGACCGAGATCCCAACA+TGG - chr8.1:78391329-78391348 None:intergenic 60.0%
CGAACACCGTGTGGAGAAGC+TGG - chr8.1:78392760-78392779 None:intergenic 60.0%
GCCCGCTAGTTGTTTGTGGC+AGG - chr8.1:78391348-78391367 None:intergenic 60.0%
GGCGGAAGGTTCAAACGGTG+AGG + chr8.1:78389617-78389636 MS.gene30407:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 78389582 78393494 78389582 ID=MS.gene30407
chr8.1 mRNA 78389582 78393494 78389582 ID=MS.gene30407.t1;Parent=MS.gene30407
chr8.1 exon 78389582 78389643 78389582 ID=MS.gene30407.t1.exon1;Parent=MS.gene30407.t1
chr8.1 CDS 78389582 78389643 78389582 ID=cds.MS.gene30407.t1;Parent=MS.gene30407.t1
chr8.1 exon 78389735 78389917 78389735 ID=MS.gene30407.t1.exon2;Parent=MS.gene30407.t1
chr8.1 CDS 78389735 78389917 78389735 ID=cds.MS.gene30407.t1;Parent=MS.gene30407.t1
chr8.1 exon 78391667 78391965 78391667 ID=MS.gene30407.t1.exon3;Parent=MS.gene30407.t1
chr8.1 CDS 78391667 78391965 78391667 ID=cds.MS.gene30407.t1;Parent=MS.gene30407.t1
chr8.1 exon 78392183 78392429 78392183 ID=MS.gene30407.t1.exon4;Parent=MS.gene30407.t1
chr8.1 CDS 78392183 78392429 78392183 ID=cds.MS.gene30407.t1;Parent=MS.gene30407.t1
chr8.1 exon 78392738 78393494 78392738 ID=MS.gene30407.t1.exon5;Parent=MS.gene30407.t1
chr8.1 CDS 78392738 78393494 78392738 ID=cds.MS.gene30407.t1;Parent=MS.gene30407.t1
Gene Sequence

>MS.gene30407

ATGGCAGCCCCGCCGCAAGGTCTCCATATTCAGACGGCGGAAGGTTCAAACGGTGAGGCTAGGTAGCAAGAAACCACGGCGGAGATTAATTGGTGGCATAGTTAGAATGTTTAAAAGGATGCGTGTAAAGTGGCTTAAGTTACAATATCTTAGGTTATTGAAACGGCTTAAGGAACATTATAGAAACGTTGTGAAAGATCTTATTGAAGCTGGTGCTACCATTGAAACTTTTCAACAACGCCTTTTTATGGAAAGCACTTTTGCTGTCCCTCTTGGTGTTAACTTATCTACTTATCCTTCTCGGTTTGGTTCAGATTATCCTCGAACCCTCTTCATGTAAATTATCAAGTACTTTTTTCTTTCTATATAATATATATGCATGTATATAAGAAGAAAAGGAAATATTCAATTCCTTATTTTCTTTCCTTTTTCTTTATTATAAAATGTAAAATTTTCCTTTTATTGCTTTTATTTTTTCTCCCCTTGTGATTTTAATTTTAGGTAAATTGTGAGGGAGTTATTTTAAGGGGATGAAAAACTATGAATGTTCTTGTTTATTGGGACTCCTTTTTTTTGTTTTTACATTTCTTTAAATTTTTTATTACCATATATTTTTTCACCTCTCAGTCTCTAATATTGTTCATGGAGACTGAGTAAATTTTTATCTTTCATTTCTAGGTTCAAGTTTGTTTTTATGGGAACTTGAATCTTTGTGAGAAAACAATATAGGAGATCTCGCAAATAAAAGAGTCATTCCATCTGCAGTATGAAAAATATGTGCAAGTAGATTTTATTACTTTGGCTAGATAGGAGATATTCTTGTATGGTTAAGATAAAATTTATACCGTTTAGGCACACAATAAGATATTTTTTAAATATTTTAAAAAAATTGATTTAACATTTTTTTAAAAAAAAAAGTGTATCTTTGCGTTGCGTGTATGTGAGTCTAAGCATTATATTTTTGGCACTGTGACCACACAAGACACTATCTACTGCATAGTAGTGATTGTCTCTTTTCACGTTAACATTAATGGGTTTTATTTTCTTAATACCCAAAATGAATTATGGGAAAAATAATGTTCAGTTCTGTTATGATTAAAGTTAAAAATTGGTTAGGGAGGTGAACAAGGAACGTATCGTGACTGAATAGACTTCTGGTCTTATTGGATTATGTGAGTCAATATTTGTTTGATGGATTTTTCTTAGTGCTTGTGCTTGTTTGTGCGTTGGAAGGCACTATACGTAAGTTTCAATTCTGGCACTCAATATTTTAACGTGATTGTGACACTAAAATCGGTTCAATGTTGAAGCTAATAATATGGGTAGCTTTTGCGTCCAATGAAAACTGCTTCAGCATTTTATTGATGTGATTAGTATTCAATTTACCATTTACTGAACTGCTGCACTCTCATATTTTTATTTATGTTCTCCATTTTTGTAATTGTTCAAACTCAGGTAAATACACATTTACAAATTACAATAATTTTTATCTTTCTCACTCACTTTTTATTAGGTGAAACTCAAATTAATTTTATCTAATAAAAAAAAAAGTGCCAGAGAATGTTACTATCACCTATACCATTTGAAATAACCAAGTGATAACAATACAATAAAACACAACAAATGCTATGAAATCCTTCAAAATTGATCAAATGCACCAAACTACCTATCTGAAATTACAAAGACACACAACATAGGAAAACACCTGCACTTCACAAAAAGCAGCACACACAAACTGAGAAAGCCATGTTGGGATCTCGGTCCCTGCCACAAACAACTAGCGGGCAAACGAAGAAAAAGAAAGGAATCGATTTCTTTTACCGCAGCCTATCAGGAAAGGATGGAGATACAACCAAGACGACACTCGAAAAATAAGTTGATTCCCCCTAAAAGGATTAGACTTCTCTAACACCAAAGATCCAAATTCCATTTCAAAATTAAGACAGCTGAAGCTCTAACATATCAAATAAACCAAAAAAAAAAGGCACTAGGGACTAACAAGTAATCAAAATTGTGTTGAGTAATTGTGTTAATTGTGTTGGTTTTTTGAAAATCTATCTTTTATGAGTGAGAGTCGAAGTGAAGTGACGCTATTTACGTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCATCTGACTTTCTTGGTTATGTACTCAAATCAGCAACTCACAGAGTCATACCGAATTTGAGATCTAAAGCTACATTACAACTCAATAACCCTGAGTTTAACACCTTTGAAGATATACGCTCTCTCTACGATGGTGGAATTAAGCTTCCTACTGATGGACTAAGCCAGATTAGCCCAATACCGTTGTTCAAAGAACTTTTTCGAACTGATGGTGAAGCGGTACTTAAGTTTCCACCACCTAAAGTGGTTCAAGGTATATATTGGTTACAATTTCTAGCCCTAAAAATAAATTAAGTCAGGGTGTTGAAGCTTCAATGTTGTTGTAAATGACTCATGCTATCACCAACTTGTCAGCCATTGGTATGAATTTCATTAATCAGTTTTATACAATCAAACACTAAATTTGATCTATCGATGAGTAATTTCATAAATATATATCTCAATGTTTGACAGGTTGAACACTCATGCAGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCACCCTATTCATAAACTTTTACTTCCACACTACCGTGACACAATGAACATAAATTCCCTCGCACGAACTATCTTGGTCAATGCAGGGGGTGTTATGGAATTAACTTTCTTGTGGGGAGATTATGCTGTTGAAATGTCCGTTGTTGTTTACAAGGATTGGAATTTCATTGAGCAAGGATTACCTAATGATCTAATCAAAAGGTAACCTTACATCTTGGGTCAGTCCATTTTTCTAAAAAGATATTGATCTAAAACATATTTTTGTAATGTTCATGAGGTGCCATCTCAGATTCTCAGTGGTAATAACTACAAATCAACGAAGTAACGCCCTAATAACAAACTCTAACTAACTTTTATATTTCTATTGGACAGACTTGTATCTCCTCTAAAACAGTAGTAAAATGATCATTCGTATCACTTTAAATAATAATATTAATGAATCCCTTCTCCAATTTTGTTTTTGTAATATTGTATGCATGTTAATTTTATCTTCCTTGCATGTTATTTAGAGGAGTGGCAGTTCAGGATCCAGCTTCTCCACACGGTGTTCGACTTCTGATAGAGGACTATCCTTATGCTTCAGATGGACTAGAGATATGGGCTGCTATTAAGTCATGGGTTGATGAATATGTGAATTTCTACTACAAGTCTGATGCAGATGTTGTAAAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTCGAGGTGGGTCACGGTGACTTTAGGAATGCAACATGGTGGTTTAAGATGCAAACTCGTACGGAGTTGAAAGAAGCTTGCACCATTCTCATATGGATTTCTTCAGCGCTTCATGCAGCTGTTAATTTTGGACAATATGCGTATGGAGGATATATCCTTAACCGACCAACAAAAAGTAGAAGATTCATGCCGGAGAAAGGATCTGTTGAGTATGATGAGCTTGCTAAGGACTACCAGAAGACTTATTTGAGAACAATCACCGCGAAGAATGATACCCTTACTAACTTGACCATCTTAGAGGTCTTGTCAAGGCATGCTTCTGATGAGCAATACCTTGGAGAGAGAATCGAAGGCGATCTCTGGACTTCTGATTCACAGCCAAAACAGGCCTACAAGAAGTTTGGAAAGAAGTTGGCTGAAATCGAGAAAAACCTCATTCAAAGGAACAATGATGAGACACTAAGGAATCGAAATGGACCTGTGAAGATGCCATATACTATGCTTTATCCTTCTAGTGAGGAAGGATTGACTTCCAGAGGCATTCCAAACAGTGTCTCCATCTAA
Protein sequence

>MS.gene30407.t1

MAAPPQGLHIQTAEGSNGEARLLKRLKEHYRNVVKDLIEAGATIETFQQRLFMESTFAVPLGVNLSTYPSRFGSDYPRTLFIDAIYVPRDESFGHLKSSDFLGYVLKSATHRVIPNLRSKATLQLNNPEFNTFEDIRSLYDGGIKLPTDGLSQISPIPLFKELFRTDGEAVLKFPPPKVVQVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINSLARTILVNAGGVMELTFLWGDYAVEMSVVVYKDWNFIEQGLPNDLIKRGVAVQDPASPHGVRLLIEDYPYASDGLEIWAAIKSWVDEYVNFYYKSDADVVKDSELQAFWKELVEVGHGDFRNATWWFKMQTRTELKEACTILIWISSALHAAVNFGQYAYGGYILNRPTKSRRFMPEKGSVEYDELAKDYQKTYLRTITAKNDTLTNLTILEVLSRHASDEQYLGERIEGDLWTSDSQPKQAYKKFGKKLAEIEKNLIQRNNDETLRNRNGPVKMPYTMLYPSSEEGLTSRGIPNSVSI