Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31360.t1 | XP_024633280.1 | 84 | 814 | 125 | 1 | 1 | 809 | 1 | 814 | 2.80E-145 | 526.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31360.t1 | Q5XV31 | 27.3 | 245 | 173 | 4 | 583 | 822 | 555 | 799 | 1.2e-14 | 83.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31360.t1 | A0A072VBX3 | 83.6 | 818 | 125 | 1 | 1 | 809 | 1 | 818 | 2.6e-145 | 525.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene31360 | 0.818215 | 2.20E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene31360 | 0.84156 | 4.41E-58 | -1.69E-46 |
| MS.gene050137 | MS.gene31360 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene31360 | 0.800779 | 1.23E-48 | -1.69E-46 |
| MS.gene05016 | MS.gene31360 | 0.839405 | 1.62E-57 | -1.69E-46 |
| MS.gene05045 | MS.gene31360 | 0.803535 | 3.33E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene31360 | 0.828929 | 6.84E-55 | -1.69E-46 |
| MS.gene050808 | MS.gene31360 | 0.803208 | 3.89E-49 | -1.69E-46 |
| MS.gene050959 | MS.gene31360 | 0.815459 | 9.15E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene31360 | 0.815266 | 1.01E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene31360 | 0.813872 | 2.05E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene31360 | 0.803865 | 2.84E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene31360 | 0.837174 | 6.07E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene31360 | 0.830528 | 2.79E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene31360 | 0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene051789 | MS.gene31360 | 0.806391 | 8.42E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene31360 | 0.811216 | 7.82E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene31360 | 0.818227 | 2.19E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene31360 | 0.831098 | 2.02E-55 | -1.69E-46 |
| MS.gene052612 | MS.gene31360 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene31360 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene31360 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene31360 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene31360 | 0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene053383 | MS.gene31360 | 0.822809 | 1.94E-53 | -1.69E-46 |
| MS.gene053563 | MS.gene31360 | 0.813528 | 2.45E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene31360 | 0.81129 | 7.54E-51 | -1.69E-46 |
| MS.gene05456 | MS.gene31360 | 0.831614 | 1.51E-55 | -1.69E-46 |
| MS.gene055227 | MS.gene31360 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene31360 | 0.805373 | 1.38E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene31360 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene055359 | MS.gene31360 | 0.827984 | 1.16E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene31360 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene31360 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene31360 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene31360 | 0.830504 | 2.83E-55 | -1.69E-46 |
| MS.gene056005 | MS.gene31360 | 0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene31360 | 0.834062 | 3.72E-56 | -1.69E-46 |
| MS.gene056173 | MS.gene31360 | 0.828044 | 1.12E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene31360 | 0.813172 | 2.93E-51 | -1.69E-46 |
| MS.gene056545 | MS.gene31360 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene31360 | 0.821808 | 3.32E-53 | -1.69E-46 |
| MS.gene056643 | MS.gene31360 | 0.817342 | 3.47E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene31360 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene057314 | MS.gene31360 | 0.805305 | 1.42E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene31360 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene31360 | 0.812817 | 3.50E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene31360 | 0.816007 | 6.90E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene31360 | 0.813113 | 3.02E-51 | -1.69E-46 |
| MS.gene058636 | MS.gene31360 | 0.822496 | 2.30E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene31360 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene059006 | MS.gene31360 | 0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene059154 | MS.gene31360 | 0.801251 | 9.83E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene31360 | 0.805676 | 1.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31360.t1 | MTR_2g091290 | 88.509 | 818 | 85 | 1 | 1 | 809 | 1 | 818 | 0.0 | 1387 |
| MS.gene31360.t1 | MTR_2g091370 | 68.023 | 860 | 214 | 10 | 1 | 824 | 1 | 835 | 0.0 | 1013 |
| MS.gene31360.t1 | MTR_2g091010 | 66.612 | 605 | 178 | 9 | 9 | 596 | 38 | 635 | 0.0 | 697 |
| MS.gene31360.t1 | MTR_2g091010 | 55.479 | 146 | 53 | 3 | 682 | 824 | 598 | 734 | 1.25e-34 | 142 |
| MS.gene31360.t1 | MTR_2g091260 | 46.561 | 887 | 373 | 10 | 4 | 828 | 30 | 877 | 0.0 | 616 |
| MS.gene31360.t1 | MTR_2g091025 | 65.217 | 506 | 106 | 5 | 286 | 786 | 136 | 576 | 0.0 | 592 |
| MS.gene31360.t1 | MTR_2g091025 | 32.283 | 381 | 174 | 11 | 10 | 388 | 41 | 339 | 4.33e-20 | 95.5 |
| MS.gene31360.t1 | MTR_2g093010 | 46.755 | 832 | 313 | 12 | 23 | 747 | 33 | 841 | 0.0 | 580 |
| MS.gene31360.t1 | MTR_2g093010 | 46.755 | 832 | 313 | 12 | 23 | 747 | 32 | 840 | 0.0 | 579 |
| MS.gene31360.t1 | MTR_2g010420 | 43.049 | 820 | 380 | 11 | 58 | 827 | 57 | 839 | 0.0 | 553 |
| MS.gene31360.t1 | MTR_6g045183 | 43.914 | 838 | 356 | 13 | 4 | 828 | 32 | 768 | 2.91e-178 | 532 |
| MS.gene31360.t1 | MTR_3g110385 | 41.065 | 901 | 360 | 17 | 11 | 828 | 1 | 813 | 3.72e-166 | 503 |
| MS.gene31360.t1 | MTR_2g091080 | 43.780 | 820 | 310 | 14 | 1 | 728 | 1 | 761 | 2.98e-152 | 464 |
| MS.gene31360.t1 | MTR_5g078510 | 49.726 | 547 | 261 | 3 | 293 | 827 | 1 | 545 | 1.73e-143 | 434 |
| MS.gene31360.t1 | MTR_2g091015 | 38.219 | 887 | 364 | 19 | 5 | 738 | 26 | 881 | 2.40e-139 | 435 |
| MS.gene31360.t1 | MTR_2g091005 | 48.889 | 585 | 217 | 10 | 1 | 562 | 1 | 526 | 2.05e-132 | 408 |
| MS.gene31360.t1 | MTR_2g091005 | 50.000 | 102 | 30 | 1 | 727 | 828 | 530 | 610 | 5.82e-18 | 89.0 |
| MS.gene31360.t1 | MTR_2g091110 | 42.190 | 749 | 351 | 10 | 144 | 827 | 570 | 1301 | 6.80e-132 | 425 |
| MS.gene31360.t1 | MTR_2g091110 | 39.309 | 608 | 277 | 13 | 21 | 567 | 8 | 584 | 4.95e-83 | 290 |
| MS.gene31360.t1 | MTR_2g091110 | 31.648 | 455 | 268 | 9 | 164 | 602 | 362 | 789 | 2.16e-38 | 155 |
| MS.gene31360.t1 | MTR_2g010420 | 38.639 | 735 | 336 | 11 | 58 | 728 | 57 | 740 | 5.48e-130 | 406 |
| MS.gene31360.t1 | MTR_2g091105 | 44.657 | 627 | 266 | 12 | 219 | 827 | 124 | 687 | 2.82e-129 | 402 |
| MS.gene31360.t1 | MTR_2g091105 | 39.911 | 451 | 208 | 10 | 23 | 447 | 14 | 427 | 8.91e-60 | 216 |
| MS.gene31360.t1 | MTR_2g091250 | 42.219 | 694 | 334 | 8 | 200 | 828 | 604 | 1295 | 3.65e-128 | 415 |
| MS.gene31360.t1 | MTR_2g091250 | 34.733 | 619 | 296 | 10 | 5 | 556 | 27 | 604 | 4.62e-68 | 246 |
| MS.gene31360.t1 | MTR_2g091250 | 35.603 | 514 | 271 | 14 | 117 | 602 | 265 | 746 | 2.21e-42 | 167 |
| MS.gene31360.t1 | MTR_2g091240 | 48.704 | 540 | 224 | 9 | 302 | 828 | 92 | 591 | 5.14e-125 | 388 |
| MS.gene31360.t1 | MTR_2g091240 | 41.923 | 260 | 111 | 6 | 206 | 441 | 76 | 319 | 2.90e-32 | 133 |
| MS.gene31360.t1 | MTR_2g091245 | 46.809 | 517 | 248 | 8 | 322 | 828 | 162 | 661 | 1.21e-111 | 355 |
| MS.gene31360.t1 | MTR_2g091245 | 41.667 | 420 | 193 | 10 | 21 | 431 | 11 | 387 | 7.94e-54 | 198 |
| MS.gene31360.t1 | MTR_2g091325 | 43.082 | 571 | 277 | 11 | 5 | 565 | 28 | 560 | 1.28e-107 | 342 |
| MS.gene31360.t1 | MTR_2g091090 | 48.423 | 444 | 210 | 4 | 391 | 827 | 222 | 653 | 1.58e-103 | 334 |
| MS.gene31360.t1 | MTR_2g091090 | 40.306 | 392 | 182 | 4 | 36 | 427 | 31 | 370 | 2.33e-56 | 206 |
| MS.gene31360.t1 | MTR_2g091070 | 74.163 | 209 | 54 | 0 | 578 | 786 | 1 | 209 | 9.00e-96 | 298 |
| MS.gene31360.t1 | MTR_2g091335 | 43.446 | 534 | 250 | 10 | 219 | 728 | 102 | 607 | 3.89e-95 | 310 |
| MS.gene31360.t1 | MTR_2g091335 | 40.046 | 437 | 206 | 10 | 7 | 439 | 29 | 413 | 4.76e-64 | 226 |
| MS.gene31360.t1 | MTR_2g091285 | 44.576 | 507 | 211 | 10 | 245 | 725 | 127 | 589 | 9.70e-95 | 309 |
| MS.gene31360.t1 | MTR_2g091285 | 36.941 | 425 | 201 | 8 | 17 | 429 | 42 | 411 | 6.17e-51 | 189 |
| MS.gene31360.t1 | MTR_2g091030 | 39.351 | 709 | 251 | 16 | 26 | 725 | 50 | 588 | 1.70e-94 | 308 |
| MS.gene31360.t1 | MTR_2g091030 | 30.626 | 431 | 195 | 11 | 7 | 436 | 97 | 424 | 1.02e-18 | 91.3 |
| MS.gene31360.t1 | MTR_2g090980 | 59.073 | 259 | 93 | 3 | 494 | 747 | 288 | 538 | 2.75e-82 | 274 |
| MS.gene31360.t1 | MTR_2g091330 | 37.520 | 621 | 255 | 15 | 6 | 553 | 31 | 591 | 1.07e-81 | 275 |
| MS.gene31360.t1 | MTR_2g091330 | 33.433 | 335 | 201 | 5 | 229 | 559 | 148 | 464 | 1.14e-21 | 100 |
| MS.gene31360.t1 | MTR_2g091315 | 39.597 | 596 | 273 | 11 | 1 | 544 | 1 | 561 | 8.81e-79 | 265 |
| MS.gene31360.t1 | MTR_5g038810 | 40.260 | 385 | 210 | 4 | 375 | 755 | 144 | 512 | 4.91e-67 | 236 |
| MS.gene31360.t1 | MTR_5g038810 | 36.842 | 342 | 177 | 5 | 48 | 386 | 17 | 322 | 9.22e-40 | 157 |
| MS.gene31360.t1 | MTR_2g091280 | 37.209 | 559 | 268 | 9 | 8 | 552 | 33 | 522 | 1.29e-66 | 236 |
| MS.gene31360.t1 | MTR_2g091280 | 35.952 | 420 | 210 | 7 | 168 | 565 | 342 | 724 | 4.94e-42 | 164 |
| MS.gene31360.t1 | MTR_2g104190 | 41.333 | 450 | 192 | 12 | 10 | 424 | 36 | 448 | 5.92e-60 | 215 |
| MS.gene31360.t1 | MTR_2g104190 | 39.851 | 404 | 179 | 6 | 381 | 771 | 270 | 622 | 6.47e-59 | 212 |
| MS.gene31360.t1 | MTR_2g091040 | 40.306 | 392 | 182 | 4 | 36 | 427 | 31 | 370 | 7.37e-57 | 204 |
| MS.gene31360.t1 | MTR_2g091040 | 40.654 | 214 | 115 | 2 | 391 | 604 | 222 | 423 | 2.93e-26 | 114 |
| MS.gene31360.t1 | MTR_2g091040 | 44.898 | 147 | 72 | 3 | 690 | 827 | 379 | 525 | 3.06e-26 | 114 |
| MS.gene31360.t1 | MTR_7g056313 | 38.021 | 384 | 183 | 6 | 53 | 431 | 36 | 369 | 2.15e-52 | 187 |
| MS.gene31360.t1 | MTR_7g056313 | 39.819 | 221 | 103 | 4 | 331 | 539 | 167 | 369 | 3.45e-24 | 105 |
| MS.gene31360.t1 | MTR_7g056313 | 33.505 | 194 | 87 | 3 | 405 | 556 | 151 | 344 | 1.63e-11 | 67.4 |
| MS.gene31360.t1 | MTR_2g103640 | 45.183 | 301 | 133 | 8 | 399 | 698 | 84 | 353 | 4.73e-49 | 177 |
| MS.gene31360.t1 | MTR_2g103640 | 30.350 | 257 | 142 | 9 | 57 | 305 | 2 | 229 | 1.34e-12 | 70.5 |
| MS.gene31360.t1 | MTR_2g103620 | 39.394 | 330 | 156 | 8 | 429 | 728 | 66 | 381 | 1.57e-47 | 174 |
| MS.gene31360.t1 | MTR_2g103620 | 42.657 | 143 | 76 | 3 | 46 | 188 | 2 | 138 | 9.34e-15 | 77.4 |
| MS.gene31360.t1 | MTR_8g467200 | 35.476 | 420 | 226 | 10 | 416 | 828 | 27 | 408 | 9.26e-46 | 172 |
| MS.gene31360.t1 | MTR_5g078500 | 35.250 | 400 | 149 | 8 | 5 | 403 | 14 | 304 | 2.01e-45 | 166 |
| MS.gene31360.t1 | MTR_5g078500 | 37.903 | 124 | 60 | 2 | 329 | 452 | 191 | 297 | 6.28e-11 | 64.7 |
| MS.gene31360.t1 | MTR_4g046660 | 47.773 | 247 | 121 | 4 | 586 | 828 | 439 | 681 | 3.77e-45 | 174 |
| MS.gene31360.t1 | MTR_2g090640 | 36.364 | 352 | 191 | 7 | 172 | 516 | 100 | 425 | 5.39e-33 | 135 |
| MS.gene31360.t1 | MTR_2g090640 | 34.016 | 244 | 99 | 5 | 331 | 553 | 122 | 324 | 1.44e-15 | 81.3 |
| MS.gene31360.t1 | MTR_4g084920 | 56.250 | 128 | 51 | 4 | 540 | 663 | 168 | 294 | 2.64e-31 | 125 |
| MS.gene31360.t1 | MTR_4g084920 | 39.645 | 169 | 92 | 3 | 135 | 293 | 15 | 183 | 1.86e-19 | 90.9 |
| MS.gene31360.t1 | MTR_8g107320 | 42.289 | 201 | 80 | 5 | 516 | 712 | 36 | 204 | 4.93e-31 | 121 |
| MS.gene31360.t1 | MTR_4g084930 | 58.586 | 99 | 40 | 1 | 727 | 825 | 37 | 134 | 1.31e-28 | 112 |
| MS.gene31360.t1 | MTR_2g064120 | 57.547 | 106 | 32 | 2 | 44 | 148 | 113 | 206 | 1.17e-21 | 95.9 |
| MS.gene31360.t1 | MTR_7g056317 | 59.375 | 96 | 38 | 1 | 643 | 738 | 2 | 96 | 1.16e-20 | 88.2 |
| MS.gene31360.t1 | MTR_2g091360 | 45.217 | 115 | 59 | 1 | 354 | 464 | 41 | 155 | 3.58e-17 | 84.0 |
| MS.gene31360.t1 | MTR_2g091360 | 36.601 | 153 | 75 | 3 | 257 | 409 | 26 | 156 | 6.59e-12 | 68.2 |
| MS.gene31360.t1 | MTR_2g091360 | 42.991 | 107 | 47 | 1 | 317 | 423 | 64 | 156 | 2.41e-11 | 66.2 |
| MS.gene31360.t1 | MTR_8g106540 | 50.000 | 74 | 37 | 0 | 652 | 725 | 211 | 284 | 1.14e-16 | 82.0 |
| MS.gene31360.t1 | MTR_4g095080 | 27.451 | 255 | 155 | 6 | 578 | 824 | 207 | 439 | 5.51e-14 | 75.9 |
| MS.gene31360.t1 | MTR_8g010170 | 22.601 | 323 | 214 | 6 | 537 | 824 | 127 | 448 | 9.94e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31360.t1 | AT5G27220 | 26.494 | 619 | 370 | 18 | 160 | 721 | 209 | 799 | 6.73e-19 | 92.8 |
| MS.gene31360.t1 | AT5G27220 | 26.494 | 619 | 370 | 18 | 160 | 721 | 209 | 799 | 6.73e-19 | 92.8 |
| MS.gene31360.t1 | AT5G27220 | 26.144 | 612 | 381 | 15 | 160 | 721 | 209 | 799 | 1.09e-18 | 92.0 |
| MS.gene31360.t1 | AT5G27220 | 25.989 | 177 | 127 | 3 | 590 | 763 | 858 | 1033 | 2.83e-13 | 74.7 |
| MS.gene31360.t1 | AT5G27220 | 26.144 | 612 | 381 | 15 | 160 | 721 | 209 | 799 | 1.09e-18 | 92.0 |
| MS.gene31360.t1 | AT5G27220 | 25.989 | 177 | 127 | 3 | 590 | 763 | 858 | 1033 | 2.83e-13 | 74.7 |
| MS.gene31360.t1 | AT5G27230 | 31.395 | 172 | 110 | 5 | 583 | 749 | 200 | 368 | 4.21e-13 | 73.9 |
| MS.gene31360.t1 | AT5G27230 | 27.746 | 173 | 117 | 2 | 652 | 819 | 627 | 796 | 4.16e-12 | 70.5 |
| MS.gene31360.t1 | AT5G48385 | 28.947 | 152 | 108 | 0 | 673 | 824 | 302 | 453 | 1.57e-12 | 71.6 |
Find 138 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTCCTTCTGTCAATTTA+TGG | 0.114644 | 2.4:+9021541 | MS.gene31360:CDS |
| CCCTCAAACTGCTTCTCTTT+TGG | 0.170927 | 2.4:-9020376 | None:intergenic |
| CTCCTCGTAATCTCTCTTTA+TGG | 0.219438 | 2.4:-9019246 | None:intergenic |
| TTTGATGAAGAAACAGAATT+TGG | 0.228507 | 2.4:+9020496 | MS.gene31360:CDS |
| ACTTGGCTGTAGAGCTGTTT+GGG | 0.252621 | 2.4:+9021626 | MS.gene31360:CDS |
| GAAAATTCGGCGGCGGTTCT+TGG | 0.252646 | 2.4:+9021514 | MS.gene31360:CDS |
| AGATCCATCAAAAGTTGTTT+TGG | 0.270843 | 2.4:+9021309 | MS.gene31360:CDS |
| AACCAACTCCATCGAAATTA+AGG | 0.273079 | 2.4:+9022310 | MS.gene31360:CDS |
| ACTAGCAATTTCTTGATCTA+TGG | 0.274347 | 2.4:-9022430 | None:intergenic |
| AACACCTTTAATTTCTTAAC+AGG | 0.276335 | 2.4:-9019047 | None:intergenic |
| TGTAGAGCTGTTTGGGGCCA+TGG | 0.282414 | 2.4:+9021633 | MS.gene31360:CDS |
| TTTCATCTTTCCGAGCTCTT+TGG | 0.300612 | 2.4:-9019273 | None:intergenic |
| AACTTGGCTGTAGAGCTGTT+TGG | 0.308442 | 2.4:+9021625 | MS.gene31360:CDS |
| TTGATTGAATCTCCTTCATT+TGG | 0.309421 | 2.4:-9020159 | None:intergenic |
| GATTTATCAGTCGATTTGTT+TGG | 0.319210 | 2.4:-9019131 | None:intergenic |
| AACTCCTGTTAAGAAATTAA+AGG | 0.323712 | 2.4:+9019043 | MS.gene31360:CDS |
| AGCTTTGAATTTCTCCTCTC+TGG | 0.328291 | 2.4:-9020221 | None:intergenic |
| GAAGGAGTTTACATTGAAGT+TGG | 0.335256 | 2.4:+9019829 | MS.gene31360:CDS |
| CTGTCTGACGATGACATTCT+AGG | 0.343740 | 2.4:+9021268 | MS.gene31360:CDS |
| GAAAGCACAGCTCCGTTTGA+TGG | 0.353635 | 2.4:+9019376 | MS.gene31360:CDS |
| CGAATCTCTCAAGAATTTGC+AGG | 0.359827 | 2.4:+9019316 | MS.gene31360:CDS |
| AGAGCTCGGAAAGATGAAAA+TGG | 0.362621 | 2.4:+9019277 | MS.gene31360:CDS |
| TCTCATTTGCATGGCCTTCA+AGG | 0.369890 | 2.4:-9019772 | None:intergenic |
| AAGAAAACCAACTTGATGTC+TGG | 0.370416 | 2.4:+9020056 | MS.gene31360:CDS |
| CGTTTGATGGACGACTTGAT+TGG | 0.380958 | 2.4:+9019389 | MS.gene31360:CDS |
| AACTCCATCATTTGAGTTCG+TGG | 0.382825 | 2.4:-9019647 | None:intergenic |
| GTACTACCCCTCTTCTTAAC+AGG | 0.384055 | 2.4:-9018972 | None:intergenic |
| CAGATTCAAGCTCCCTCGTT+TGG | 0.388671 | 2.4:-9019865 | None:intergenic |
| GAAGGAGATTCAATCAATAA+AGG | 0.391641 | 2.4:+9020165 | MS.gene31360:CDS |
| GTAGAGCTGTTTGGGGCCAT+GGG | 0.399160 | 2.4:+9021634 | MS.gene31360:CDS |
| AATTCTGTTTCTTCATCAAA+TGG | 0.400015 | 2.4:-9020493 | None:intergenic |
| AAGTCAAAACACTGAAAATT+CGG | 0.401532 | 2.4:+9021501 | MS.gene31360:CDS |
| TCAGCGTCGTCATAAGAAAC+TGG | 0.419951 | 2.4:-9018864 | None:intergenic |
| CCTTCTGTCAATTTATGGAC+TGG | 0.435016 | 2.4:+9021546 | MS.gene31360:CDS |
| TTGACTGAAGGTCCTTCACT+TGG | 0.435587 | 2.4:-9020033 | None:intergenic |
| ATGTTCTCGAATCGGACATC+CGG | 0.438182 | 2.4:-9018923 | None:intergenic |
| GTTGAAGAAAGAACTTGAAT+TGG | 0.440461 | 2.4:+9019163 | MS.gene31360:CDS |
| GAAGAAGCAATTTGAAGAAA+AGG | 0.445198 | 2.4:+9019679 | MS.gene31360:CDS |
| GCAATTTGAAGGACAATTGA+AGG | 0.450182 | 2.4:+9020105 | MS.gene31360:CDS |
| CTACTACAATAGCAGTTAAG+AGG | 0.451511 | 2.4:+9018994 | MS.gene31360:CDS |
| TTGAACGAAACTCCTTCATT+CGG | 0.453126 | 2.4:-9019991 | None:intergenic |
| TTTACATGAGGTCTAATATC+CGG | 0.453875 | 2.4:-9021436 | None:intergenic |
| TTAAAAGAGAATCGGCTCAT+AGG | 0.458335 | 2.4:+9019800 | MS.gene31360:CDS |
| TGGACTTAAGTTCCTTTCCT+CGG | 0.458557 | 2.4:-9020201 | None:intergenic |
| TCTTTACCGAGATTATCATA+TGG | 0.458731 | 2.4:-9019071 | None:intergenic |
| AGTCAAGGATAATGTTGATA+AGG | 0.459861 | 2.4:+9019457 | MS.gene31360:CDS |
| TTAACTTGATCTCATTTGCA+TGG | 0.466179 | 2.4:-9019781 | None:intergenic |
| TCAGAAAAGAAGCAATTTGA+AGG | 0.468686 | 2.4:+9020094 | MS.gene31360:CDS |
| TCAAAGCCAAGTGAATTTGA+TGG | 0.471347 | 2.4:+9020418 | MS.gene31360:CDS |
| CCAAAAGAGAAGCAGTTTGA+GGG | 0.475101 | 2.4:+9020376 | MS.gene31360:CDS |
| GTCAAAAGAAAAGTTATTTG+AGG | 0.475267 | 2.4:+9020135 | MS.gene31360:CDS |
| AACCTTAATTTCGATGGAGT+TGG | 0.475641 | 2.4:-9022312 | None:intergenic |
| GTTATTTGAGGACCAAATGA+AGG | 0.478648 | 2.4:+9020147 | MS.gene31360:CDS |
| ACTTGTTTCTCAGCACAACT+TGG | 0.484964 | 2.4:+9021609 | MS.gene31360:CDS |
| TCAAAGGAAAAGCTCCTTGA+AGG | 0.485098 | 2.4:+9019758 | MS.gene31360:CDS |
| AGAAAACCAACTTGATGTCT+GGG | 0.487627 | 2.4:+9020057 | MS.gene31360:CDS |
| CATTCTGCACGTGTTCTCGC+AGG | 0.488109 | 2.4:-9022256 | None:intergenic |
| GCCAAAAGAGAAGCAGTTTG+AGG | 0.494142 | 2.4:+9020375 | MS.gene31360:CDS |
| AAAGAAGAAACAACGAGAAG+AGG | 0.496141 | 2.4:+9019211 | MS.gene31360:CDS |
| TGGAGATAACAACTTAGAAC+CGG | 0.501465 | 2.4:+9022476 | MS.gene31360:CDS |
| GAAGGAGTTTCGTTCAAAAG+AGG | 0.502074 | 2.4:+9019997 | MS.gene31360:CDS |
| TATTGTTTCTCTCTTAACTC+AGG | 0.504531 | 2.4:-9020454 | None:intergenic |
| GAAGCTGTAGTACAGTGTAT+TGG | 0.506883 | 2.4:+9022456 | MS.gene31360:CDS |
| AGATCAAGTTAAAAGAGAAT+CGG | 0.509178 | 2.4:+9019792 | MS.gene31360:CDS |
| TTGATTCCATCTCCTTCACC+TGG | 0.511821 | 2.4:-9019907 | None:intergenic |
| AGTTCATCAATTTGCTCACA+TGG | 0.516435 | 2.4:-9021241 | None:intergenic |
| AGAGGTGGCGCTTGAGTCAA+AGG | 0.517508 | 2.4:+9019742 | MS.gene31360:CDS |
| AAACTTCTTTCATCAACGGC+GGG | 0.518149 | 2.4:-9021208 | None:intergenic |
| AGTTGTCCATCAAATTCACT+TGG | 0.521463 | 2.4:-9020424 | None:intergenic |
| CAATCAAGTCGTCCATCAAA+CGG | 0.521752 | 2.4:-9019388 | None:intergenic |
| AATTTGAAGAAAAGGTTAAG+TGG | 0.522097 | 2.4:+9019687 | MS.gene31360:CDS |
| GGCTTGAGTTAAAAGAGAAA+AGG | 0.523284 | 2.4:+9019708 | MS.gene31360:CDS |
| GAAAAGGTGCGAAGAAAGAG+AGG | 0.524751 | 2.4:+9019724 | MS.gene31360:CDS |
| CGATGTTCCTGTTAAGAAGA+GGG | 0.528923 | 2.4:+9018965 | MS.gene31360:CDS |
| TATTATCGAGCTGAAGAGAC+AGG | 0.529664 | 2.4:+9022527 | MS.gene31360:CDS |
| GCTACTGCATGTTCTCGAAT+CGG | 0.530759 | 2.4:-9018931 | None:intergenic |
| AGGATAATGTTGATAAGGAA+AGG | 0.534620 | 2.4:+9019462 | MS.gene31360:CDS |
| GCAGTTTGAGGGATGCATGA+AGG | 0.535597 | 2.4:+9020387 | MS.gene31360:CDS |
| GGGATAACCTTGTTGACAAA+GGG | 0.535749 | 2.4:-9018902 | None:intergenic |
| TGATCCACGAACTCAAATGA+TGG | 0.538698 | 2.4:+9019643 | MS.gene31360:CDS |
| AGATGATGCTGTTATTATTG+AGG | 0.542560 | 2.4:+9021372 | MS.gene31360:CDS |
| CTTTGTCAACAAGGTTATCC+CGG | 0.543825 | 2.4:+9018904 | MS.gene31360:CDS |
| GAAATTCAAAGCTCGAATGC+AGG | 0.545511 | 2.4:+9020231 | MS.gene31360:CDS |
| TGTTCTCGAATCGGACATCC+GGG | 0.549701 | 2.4:-9018922 | None:intergenic |
| TAACAGGAACATCGCGGTCG+CGG | 0.550126 | 2.4:-9018956 | None:intergenic |
| CAGTTTGAGGGATGCATGAA+GGG | 0.550894 | 2.4:+9020388 | MS.gene31360:CDS |
| AAAGAAGCATTTCGATAGCC+AGG | 0.551880 | 2.4:+9019889 | MS.gene31360:CDS |
| GACATTCTAGGTAATTTGCA+AGG | 0.553752 | 2.4:+9021280 | MS.gene31360:CDS |
| CCTTCACCCAGACATCAAGT+TGG | 0.554057 | 2.4:-9020063 | None:intergenic |
| ACATCATCTTCATCGAAAGA+AGG | 0.555338 | 2.4:-9021571 | None:intergenic |
| GCAACTGAAAGGCCGAATGA+AGG | 0.559998 | 2.4:+9019979 | MS.gene31360:CDS |
| CAGAAAGATTAGATTCAGAA+AGG | 0.560438 | 2.4:+9019585 | MS.gene31360:CDS |
| TACTACAATAGCAGTTAAGA+GGG | 0.565085 | 2.4:+9018995 | MS.gene31360:CDS |
| CGATAGCCAGGTGAAGGAGA+TGG | 0.566708 | 2.4:+9019901 | MS.gene31360:CDS |
| GAAGTTCAAAGTAGACGCGA+AGG | 0.569577 | 2.4:+9020345 | MS.gene31360:CDS |
| GTGTTACCATATGATAATCT+CGG | 0.570480 | 2.4:+9019065 | MS.gene31360:CDS |
| TGAATATGAAGACCGAGGAA+AGG | 0.570645 | 2.4:+9020189 | MS.gene31360:CDS |
| CATCAAACTTCTTTCATCAA+CGG | 0.571269 | 2.4:-9021212 | None:intergenic |
| CGGGATAACCTTGTTGACAA+AGG | 0.578070 | 2.4:-9018903 | None:intergenic |
| AACAGAACTTCGTCAAGTCA+AGG | 0.581245 | 2.4:+9019442 | MS.gene31360:CDS |
| GCATTTCGATAGCCAGGTGA+AGG | 0.583365 | 2.4:+9019895 | MS.gene31360:CDS |
| TCAAAAGAGGAGCAATTCAA+AGG | 0.585840 | 2.4:+9020010 | MS.gene31360:CDS |
| ATGACGTCCCTTTGTCAACA+AGG | 0.587125 | 2.4:+9018895 | MS.gene31360:CDS |
| GAAATTTAATTACCAAACGA+GGG | 0.595729 | 2.4:+9019853 | MS.gene31360:CDS |
| GAATCTCTCAAGAATTTGCA+GGG | 0.596784 | 2.4:+9019317 | MS.gene31360:CDS |
| TCGGCTCATAGGCGAAAGGA+AGG | 0.598190 | 2.4:+9019811 | MS.gene31360:CDS |
| TTAAAAGAGGAGCAACTGAA+AGG | 0.598490 | 2.4:+9019968 | MS.gene31360:CDS |
| GTTCATTGAGCAGATGAATG+TGG | 0.599774 | 2.4:-9021399 | None:intergenic |
| CTTGGCTGTAGAGCTGTTTG+GGG | 0.601722 | 2.4:+9021627 | MS.gene31360:CDS |
| GAGGAGTGCTCCAAAGAGCT+CGG | 0.602653 | 2.4:+9019263 | MS.gene31360:CDS |
| CAAACTTCTTTCATCAACGG+CGG | 0.605644 | 2.4:-9021209 | None:intergenic |
| TGAACTGAGGAGAATCTCAC+CGG | 0.607816 | 2.4:+9021417 | MS.gene31360:CDS |
| CCAGTCCATAAATTGACAGA+AGG | 0.607939 | 2.4:-9021546 | None:intergenic |
| GAAGCAGCTAGAGTTAAAAG+AGG | 0.609106 | 2.4:+9019955 | MS.gene31360:CDS |
| GAGAGAGGCAATTTGAAGAA+CGG | 0.612393 | 2.4:+9019930 | MS.gene31360:CDS |
| AGAAATTTAATTACCAAACG+AGG | 0.613348 | 2.4:+9019852 | MS.gene31360:CDS |
| CCAACTTGATGTCTGGGTGA+AGG | 0.616627 | 2.4:+9020063 | MS.gene31360:CDS |
| GCAATTCAAAGGCCAAGTGA+AGG | 0.616936 | 2.4:+9020021 | MS.gene31360:CDS |
| GCGATGTTCCTGTTAAGAAG+AGG | 0.618829 | 2.4:+9018964 | MS.gene31360:CDS |
| AAGAGAGTACTCCTCTGTCA+AGG | 0.621902 | 2.4:+9019096 | MS.gene31360:CDS |
| AGAAAGGAAGAAGTTACTGA+AGG | 0.628712 | 2.4:+9019601 | MS.gene31360:CDS |
| GTTCATCAATTTGCTCACAT+GGG | 0.629979 | 2.4:-9021240 | None:intergenic |
| AAACACTGAAAATTCGGCGG+CGG | 0.641205 | 2.4:+9021507 | MS.gene31360:CDS |
| AGGAGATGGAATCAAGAGAG+AGG | 0.646522 | 2.4:+9019915 | MS.gene31360:CDS |
| TTCCATAAAGAGAGATTACG+AGG | 0.648170 | 2.4:+9019244 | MS.gene31360:CDS |
| ATCGAGCTGAAGAGACAGGA+CGG | 0.656710 | 2.4:+9022531 | MS.gene31360:CDS |
| AATTTGATGGACAACTGAAG+CGG | 0.657849 | 2.4:+9020431 | MS.gene31360:CDS |
| AGAATCGGCTCATAGGCGAA+AGG | 0.660495 | 2.4:+9019807 | MS.gene31360:CDS |
| TTCATCTGCTCAATGAACTG+AGG | 0.660575 | 2.4:+9021404 | MS.gene31360:CDS |
| ATTTCAACTCTCCTTGACAG+AGG | 0.660902 | 2.4:-9019107 | None:intergenic |
| AAGGATGAATATGAAGACCG+AGG | 0.673092 | 2.4:+9020184 | MS.gene31360:CDS |
| AAGGTGCGAAGAAAGAGAGG+TGG | 0.683443 | 2.4:+9019727 | MS.gene31360:CDS |
| AGATAACAACTTAGAACCGG+AGG | 0.686893 | 2.4:+9022479 | MS.gene31360:CDS |
| TCAAAACACTGAAAATTCGG+CGG | 0.707081 | 2.4:+9021504 | MS.gene31360:CDS |
| AAAGGAACTTAAGTCCAGAG+AGG | 0.709934 | 2.4:+9020207 | MS.gene31360:CDS |
| GATGTTCCTGTTAAGAAGAG+GGG | 0.714856 | 2.4:+9018966 | MS.gene31360:CDS |
| ACTACAATAGCAGTTAAGAG+GGG | 0.730698 | 2.4:+9018996 | MS.gene31360:CDS |
| TCTTCTTAACAGGAACATCG+CGG | 0.762881 | 2.4:-9018962 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTGTTATAAAATTAAA+GGG | - | chr2.4:9020540-9020559 | None:intergenic | 10.0% |
| !! | TATTTATAACTATTATGAAA+GGG | - | chr2.4:9022386-9022405 | None:intergenic | 10.0% |
| !! | TGAAATTGTTATAAAATTAA+AGG | - | chr2.4:9020541-9020560 | None:intergenic | 10.0% |
| !! | GTATTTATAACTATTATGAA+AGG | - | chr2.4:9022387-9022406 | None:intergenic | 15.0% |
| !! | TTTAATAAACTAGACATATT+AGG | - | chr2.4:9020605-9020624 | None:intergenic | 15.0% |
| !!! | ATCTTACACTTTTTAATAAT+AGG | - | chr2.4:9021349-9021368 | None:intergenic | 15.0% |
| !!! | ATTATTAAAAAGTGTAAGAT+GGG | + | chr2.4:9021349-9021368 | MS.gene31360:CDS | 15.0% |
| !!! | TATTATTAAAAAGTGTAAGA+TGG | + | chr2.4:9021348-9021367 | MS.gene31360:CDS | 15.0% |
| !!! | TCTTACACTTTTTAATAATA+GGG | - | chr2.4:9021348-9021367 | None:intergenic | 15.0% |
| !! | CAATATAAAGATCAATACAT+AGG | + | chr2.4:9020943-9020962 | MS.gene31360:intron | 20.0% |
| !! | TATCTTCATTACTACTAATT+TGG | + | chr2.4:9020695-9020714 | MS.gene31360:intron | 20.0% |
| !!! | TATAATATGATGATGATTGA+TGG | + | chr2.4:9020918-9020937 | MS.gene31360:intron | 20.0% |
| !!! | TATATTAAGATTTTAGTTGC+AGG | + | chr2.4:9021880-9021899 | MS.gene31360:intron | 20.0% |
| !!! | TCAAAAACTTTTACATTATG+AGG | + | chr2.4:9021829-9021848 | MS.gene31360:intron | 20.0% |
| !!! | TTTTCTTTCATATGGTATTA+TGG | + | chr2.4:9021702-9021721 | MS.gene31360:intron | 20.0% |
| !!! | TTTTTTCCTTATTTTAGCAA+TGG | + | chr2.4:9020749-9020768 | MS.gene31360:intron | 20.0% |
| ! | AAAAAGAACCTTAATTTCGA+TGG | - | chr2.4:9022321-9022340 | None:intergenic | 25.0% |
| ! | AACTCCTGTTAAGAAATTAA+AGG | + | chr2.4:9019043-9019062 | MS.gene31360:CDS | 25.0% |
| ! | AAGTCAAAACACTGAAAATT+CGG | + | chr2.4:9021501-9021520 | MS.gene31360:CDS | 25.0% |
| ! | AATTTGAAGAAAAGGTTAAG+TGG | + | chr2.4:9019687-9019706 | MS.gene31360:CDS | 25.0% |
| ! | AGAAATTTAATTACCAAACG+AGG | + | chr2.4:9019852-9019871 | MS.gene31360:CDS | 25.0% |
| ! | AGATCAAGTTAAAAGAGAAT+CGG | + | chr2.4:9019792-9019811 | MS.gene31360:CDS | 25.0% |
| ! | ATTATCCTTACAAACTATGT+GGG | + | chr2.4:9021037-9021056 | MS.gene31360:intron | 25.0% |
| ! | GAAATTTAATTACCAAACGA+GGG | + | chr2.4:9019853-9019872 | MS.gene31360:CDS | 25.0% |
| ! | GAACTTATTTATAACTGTTC+TGG | + | chr2.4:9022098-9022117 | MS.gene31360:intron | 25.0% |
| ! | GTCAAAAGAAAAGTTATTTG+AGG | + | chr2.4:9020135-9020154 | MS.gene31360:CDS | 25.0% |
| ! | TAACAAAAAACATAGCAGAT+AGG | - | chr2.4:9022074-9022093 | None:intergenic | 25.0% |
| ! | TACCATATGAAAGAAAAACA+AGG | - | chr2.4:9021699-9021718 | None:intergenic | 25.0% |
| ! | TCAGAAGAAAAACAATTTGA+AGG | + | chr2.4:9020292-9020311 | MS.gene31360:CDS | 25.0% |
| ! | TTTGATGAAGAAACAGAATT+TGG | + | chr2.4:9020496-9020515 | MS.gene31360:CDS | 25.0% |
| !! | AACACCTTTAATTTCTTAAC+AGG | - | chr2.4:9019050-9019069 | None:intergenic | 25.0% |
| !! | AATTCTGTTTCTTCATCAAA+TGG | - | chr2.4:9020496-9020515 | None:intergenic | 25.0% |
| !! | ATTTCCAAAACAACTTTTGA+TGG | - | chr2.4:9021316-9021335 | None:intergenic | 25.0% |
| !! | CAAATAACTTTTCTTTTGAC+TGG | - | chr2.4:9020135-9020154 | None:intergenic | 25.0% |
| !! | TGTTTTCATGTGTATAAATG+TGG | - | chr2.4:9021732-9021751 | None:intergenic | 25.0% |
| !!! | GATGATGTTTTAAAGCTTTT+TGG | + | chr2.4:9021586-9021605 | MS.gene31360:CDS | 25.0% |
| AAAAACAATTTGAAGGACAG+GGG | + | chr2.4:9020299-9020318 | MS.gene31360:CDS | 30.0% | |
| AAAAATTGATGAATGTGGCA+AGG | + | chr2.4:9019340-9019359 | MS.gene31360:CDS | 30.0% | |
| AAAAATTGCTGAATGTACTG+TGG | + | chr2.4:9019505-9019524 | MS.gene31360:CDS | 30.0% | |
| AAATACTTGAACATGATCAC+AGG | + | chr2.4:9022401-9022420 | MS.gene31360:intron | 30.0% | |
| AAATTGAACTGATACCTAGT+TGG | + | chr2.4:9021907-9021926 | MS.gene31360:intron | 30.0% | |
| ACTAAGCCATTGCTAAAATA+AGG | - | chr2.4:9020758-9020777 | None:intergenic | 30.0% | |
| ACTAGCAATTTCTTGATCTA+TGG | - | chr2.4:9022433-9022452 | None:intergenic | 30.0% | |
| AGAAAAACAATTTGAAGGAC+AGG | + | chr2.4:9020297-9020316 | MS.gene31360:CDS | 30.0% | |
| AGATGATGCTGTTATTATTG+AGG | + | chr2.4:9021372-9021391 | MS.gene31360:CDS | 30.0% | |
| AGTCAAGGATAATGTTGATA+AGG | + | chr2.4:9019457-9019476 | MS.gene31360:CDS | 30.0% | |
| ATTGAAGGATCAGTAAATCA+AGG | - | chr2.4:9021117-9021136 | None:intergenic | 30.0% | |
| CAGAAAGATTAGATTCAGAA+AGG | + | chr2.4:9019585-9019604 | MS.gene31360:CDS | 30.0% | |
| CATCAAACTTCTTTCATCAA+CGG | - | chr2.4:9021215-9021234 | None:intergenic | 30.0% | |
| CATTATCCTTACAAACTATG+TGG | + | chr2.4:9021036-9021055 | MS.gene31360:intron | 30.0% | |
| CTGAATAAAAATCCTCCATT+TGG | - | chr2.4:9020276-9020295 | None:intergenic | 30.0% | |
| GAAAAACAATTTGAAGGACA+GGG | + | chr2.4:9020298-9020317 | MS.gene31360:CDS | 30.0% | |
| GAAGAAGCAATTTGAAGAAA+AGG | + | chr2.4:9019679-9019698 | MS.gene31360:CDS | 30.0% | |
| GAAGGAGATTCAATCAATAA+AGG | + | chr2.4:9020165-9020184 | MS.gene31360:CDS | 30.0% | |
| GTGTTACCATATGATAATCT+CGG | + | chr2.4:9019065-9019084 | MS.gene31360:CDS | 30.0% | |
| GTTGAAGAAAGAACTTGAAT+TGG | + | chr2.4:9019163-9019182 | MS.gene31360:CDS | 30.0% | |
| TACTACAATAGCAGTTAAGA+GGG | + | chr2.4:9018995-9019014 | MS.gene31360:CDS | 30.0% | |
| TCAACAACATTTGAAAGACA+CGG | - | chr2.4:9020570-9020589 | None:intergenic | 30.0% | |
| TCAGAAAAGAAGCAATTTGA+AGG | + | chr2.4:9020094-9020113 | MS.gene31360:CDS | 30.0% | |
| TCTTTACCGAGATTATCATA+TGG | - | chr2.4:9019074-9019093 | None:intergenic | 30.0% | |
| TTGATTGAATCTCCTTCATT+TGG | - | chr2.4:9020162-9020181 | None:intergenic | 30.0% | |
| TTTACATGAGGTCTAATATC+CGG | - | chr2.4:9021439-9021458 | None:intergenic | 30.0% | |
| ! | AGATCCATCAAAAGTTGTTT+TGG | + | chr2.4:9021309-9021328 | MS.gene31360:CDS | 30.0% |
| ! | AGGATAATGTTGATAAGGAA+AGG | + | chr2.4:9019462-9019481 | MS.gene31360:CDS | 30.0% |
| ! | AGTACATTCAGCAATTTTTC+GGG | - | chr2.4:9019504-9019523 | None:intergenic | 30.0% |
| ! | ATTGCTTCTTCTTTTACATG+AGG | - | chr2.4:9021451-9021470 | None:intergenic | 30.0% |
| ! | CAGTACATTCAGCAATTTTT+CGG | - | chr2.4:9019505-9019524 | None:intergenic | 30.0% |
| ! | GGTTTTGCAGATAAAATATC+AGG | + | chr2.4:9021655-9021674 | MS.gene31360:CDS | 30.0% |
| ! | TATTGTTTCTCTCTTAACTC+AGG | - | chr2.4:9020457-9020476 | None:intergenic | 30.0% |
| ! | TATTTTATCTGCAAAACCCA+TGG | - | chr2.4:9021653-9021672 | None:intergenic | 30.0% |
| ! | TTAACTTGATCTCATTTGCA+TGG | - | chr2.4:9019784-9019803 | None:intergenic | 30.0% |
| !! | ATTGGTAGAAAAAGCATTTG+AGG | + | chr2.4:9019181-9019200 | MS.gene31360:CDS | 30.0% |
| !! | GATTTATCAGTCGATTTGTT+TGG | - | chr2.4:9019134-9019153 | None:intergenic | 30.0% |
| !!! | ATGTTTTTAAGTAGATCCTC+CGG | - | chr2.4:9022498-9022517 | None:intergenic | 30.0% |
| !!! | TGCCTTGTTTTTCTTTCATA+TGG | + | chr2.4:9021694-9021713 | MS.gene31360:intron | 30.0% |
| !!! | TTAAGATTTTAGTTGCAGGT+AGG | + | chr2.4:9021884-9021903 | MS.gene31360:intron | 30.0% |
| AAAGAAGAAACAACGAGAAG+AGG | + | chr2.4:9019211-9019230 | MS.gene31360:CDS | 35.0% | |
| AACCAACTCCATCGAAATTA+AGG | + | chr2.4:9022310-9022329 | MS.gene31360:CDS | 35.0% | |
| AACCTTAATTTCGATGGAGT+TGG | - | chr2.4:9022315-9022334 | None:intergenic | 35.0% | |
| AAGAAAACCAACTTGATGTC+TGG | + | chr2.4:9020056-9020075 | MS.gene31360:CDS | 35.0% | |
| ACATCATCTTCATCGAAAGA+AGG | - | chr2.4:9021574-9021593 | None:intergenic | 35.0% | |
| ACATGTCAATTCTCTCTTGA+AGG | - | chr2.4:9021988-9022007 | None:intergenic | 35.0% | |
| ACTACAATAGCAGTTAAGAG+GGG | + | chr2.4:9018996-9019015 | MS.gene31360:CDS | 35.0% | |
| AGAAAACCAACTTGATGTCT+GGG | + | chr2.4:9020057-9020076 | MS.gene31360:CDS | 35.0% | |
| AGAAAGGAAGAAGTTACTGA+AGG | + | chr2.4:9019601-9019620 | MS.gene31360:CDS | 35.0% | |
| AGTTGTCCATCAAATTCACT+TGG | - | chr2.4:9020427-9020446 | None:intergenic | 35.0% | |
| CAGGGAAAAATTGATGAATG+TGG | + | chr2.4:9019335-9019354 | MS.gene31360:CDS | 35.0% | |
| CTACTACAATAGCAGTTAAG+AGG | + | chr2.4:9018994-9019013 | MS.gene31360:CDS | 35.0% | |
| CTACTCCTTCTGTCAATTTA+TGG | + | chr2.4:9021541-9021560 | MS.gene31360:CDS | 35.0% | |
| GAAGGAGTTTACATTGAAGT+TGG | + | chr2.4:9019829-9019848 | MS.gene31360:CDS | 35.0% | |
| GAATCTCTCAAGAATTTGCA+GGG | + | chr2.4:9019317-9019336 | MS.gene31360:CDS | 35.0% | |
| GATTATCAACAAAGTCTGCA+AGG | - | chr2.4:9022154-9022173 | None:intergenic | 35.0% | |
| GCAATTTGAAGGACAATTGA+AGG | + | chr2.4:9020105-9020124 | MS.gene31360:CDS | 35.0% | |
| GGCTTGAGTTAAAAGAGAAA+AGG | + | chr2.4:9019708-9019727 | MS.gene31360:CDS | 35.0% | |
| GTTATTTGAGGACCAAATGA+AGG | + | chr2.4:9020147-9020166 | MS.gene31360:CDS | 35.0% | |
| TCAAAACACTGAAAATTCGG+CGG | + | chr2.4:9021504-9021523 | MS.gene31360:CDS | 35.0% | |
| TCAAAAGAGGAGCAATTCAA+AGG | + | chr2.4:9020010-9020029 | MS.gene31360:CDS | 35.0% | |
| TCAAAGCCAAGTGAATTTGA+TGG | + | chr2.4:9020418-9020437 | MS.gene31360:CDS | 35.0% | |
| TCAAGAGAGAATTGACATGT+TGG | + | chr2.4:9021988-9022007 | MS.gene31360:intron | 35.0% | |
| TCAAGTATATGAAGCCAACT+AGG | - | chr2.4:9021924-9021943 | None:intergenic | 35.0% | |
| TGATCCTTCAATAAATACCG+AGG | + | chr2.4:9021125-9021144 | MS.gene31360:intron | 35.0% | |
| TGGAGATAACAACTTAGAAC+CGG | + | chr2.4:9022476-9022495 | MS.gene31360:CDS | 35.0% | |
| TTAAAAGAGGAGCAACTGAA+AGG | + | chr2.4:9019968-9019987 | MS.gene31360:CDS | 35.0% | |
| TTCCATAAAGAGAGATTACG+AGG | + | chr2.4:9019244-9019263 | MS.gene31360:CDS | 35.0% | |
| TTGAACGAAACTCCTTCATT+CGG | - | chr2.4:9019994-9020013 | None:intergenic | 35.0% | |
| ! | AATTTGATGGACAACTGAAG+CGG | + | chr2.4:9020431-9020450 | MS.gene31360:CDS | 35.0% |
| ! | AGTTCATCAATTTGCTCACA+TGG | - | chr2.4:9021244-9021263 | None:intergenic | 35.0% |
| ! | ATTATGAAAGGGTGTGAAGA+TGG | - | chr2.4:9022375-9022394 | None:intergenic | 35.0% |
| ! | GACATTCTAGGTAATTTGCA+AGG | + | chr2.4:9021280-9021299 | MS.gene31360:CDS | 35.0% |
| ! | GTTCATCAATTTGCTCACAT+GGG | - | chr2.4:9021243-9021262 | None:intergenic | 35.0% |
| ! | TTAAAAGAGAATCGGCTCAT+AGG | + | chr2.4:9019800-9019819 | MS.gene31360:CDS | 35.0% |
| !!! | GTTGGTTTTCTTTTGACTGA+AGG | - | chr2.4:9020048-9020067 | None:intergenic | 35.0% |
| AAACTTCTTTCATCAACGGC+GGG | - | chr2.4:9021211-9021230 | None:intergenic | 40.0% | |
| AAAGGAACTTAAGTCCAGAG+AGG | + | chr2.4:9020207-9020226 | MS.gene31360:CDS | 40.0% | |
| AACAGAACTTCGTCAAGTCA+AGG | + | chr2.4:9019442-9019461 | MS.gene31360:CDS | 40.0% | |
| AAGGATGAATATGAAGACCG+AGG | + | chr2.4:9020184-9020203 | MS.gene31360:CDS | 40.0% | |
| AAGGATGAGAGAGAACAGTT+TGG | - | chr2.4:9021969-9021988 | None:intergenic | 40.0% | |
| AGAGCTCGGAAAGATGAAAA+TGG | + | chr2.4:9019277-9019296 | MS.gene31360:CDS | 40.0% | |
| AGATAACAACTTAGAACCGG+AGG | + | chr2.4:9022479-9022498 | MS.gene31360:CDS | 40.0% | |
| AGCACATATTTCAGCTTCCT+CGG | - | chr2.4:9021145-9021164 | None:intergenic | 40.0% | |
| ATTTCAACTCTCCTTGACAG+AGG | - | chr2.4:9019110-9019129 | None:intergenic | 40.0% | |
| CAAACTTCTTTCATCAACGG+CGG | - | chr2.4:9021212-9021231 | None:intergenic | 40.0% | |
| CAATCAAGTCGTCCATCAAA+CGG | - | chr2.4:9019391-9019410 | None:intergenic | 40.0% | |
| CCAAAAGAGAAGCAGTTTGA+GGG | + | chr2.4:9020376-9020395 | MS.gene31360:CDS | 40.0% | |
| CCAGTCCATAAATTGACAGA+AGG | - | chr2.4:9021549-9021568 | None:intergenic | 40.0% | |
| CCTTCTGTCAATTTATGGAC+TGG | + | chr2.4:9021546-9021565 | MS.gene31360:CDS | 40.0% | |
| CGAATCTCTCAAGAATTTGC+AGG | + | chr2.4:9019316-9019335 | MS.gene31360:CDS | 40.0% | |
| CGATGTTCCTGTTAAGAAGA+GGG | + | chr2.4:9018965-9018984 | MS.gene31360:CDS | 40.0% | |
| CTCCTCGTAATCTCTCTTTA+TGG | - | chr2.4:9019249-9019268 | None:intergenic | 40.0% | |
| CTTTGTCAACAAGGTTATCC+CGG | + | chr2.4:9018904-9018923 | MS.gene31360:CDS | 40.0% | |
| GAAATTCAAAGCTCGAATGC+AGG | + | chr2.4:9020231-9020250 | MS.gene31360:CDS | 40.0% | |
| GAAGCAGCTAGAGTTAAAAG+AGG | + | chr2.4:9019955-9019974 | MS.gene31360:CDS | 40.0% | |
| GAAGCTGTAGTACAGTGTAT+TGG | + | chr2.4:9022456-9022475 | MS.gene31360:CDS | 40.0% | |
| GAAGGAGTTTCGTTCAAAAG+AGG | + | chr2.4:9019997-9020016 | MS.gene31360:CDS | 40.0% | |
| GACATGTTGGTCAATATGCT+TGG | + | chr2.4:9022001-9022020 | MS.gene31360:intron | 40.0% | |
| GAGAGAGGCAATTTGAAGAA+CGG | + | chr2.4:9019930-9019949 | MS.gene31360:CDS | 40.0% | |
| GATGTTCCTGTTAAGAAGAG+GGG | + | chr2.4:9018966-9018985 | MS.gene31360:CDS | 40.0% | |
| GCTTCCTCGGTATTTATTGA+AGG | - | chr2.4:9021132-9021151 | None:intergenic | 40.0% | |
| GGGATAACCTTGTTGACAAA+GGG | - | chr2.4:9018905-9018924 | None:intergenic | 40.0% | |
| GTTCATTGAGCAGATGAATG+TGG | - | chr2.4:9021402-9021421 | None:intergenic | 40.0% | |
| TATGCAGTTACATCGTACAC+AGG | + | chr2.4:9021172-9021191 | MS.gene31360:intron | 40.0% | |
| TATTATCGAGCTGAAGAGAC+AGG | + | chr2.4:9022527-9022546 | MS.gene31360:CDS | 40.0% | |
| TCAAAGGAAAAGCTCCTTGA+AGG | + | chr2.4:9019758-9019777 | MS.gene31360:CDS | 40.0% | |
| TCTTCTTAACAGGAACATCG+CGG | - | chr2.4:9018965-9018984 | None:intergenic | 40.0% | |
| TGAATATGAAGACCGAGGAA+AGG | + | chr2.4:9020189-9020208 | MS.gene31360:CDS | 40.0% | |
| TGATCCACGAACTCAAATGA+TGG | + | chr2.4:9019643-9019662 | MS.gene31360:CDS | 40.0% | |
| TGGACTTAAGTTCCTTTCCT+CGG | - | chr2.4:9020204-9020223 | None:intergenic | 40.0% | |
| TGTCCCAACTTCTCTTTGAT+GGG | - | chr2.4:9021786-9021805 | None:intergenic | 40.0% | |
| TTCATCTGCTCAATGAACTG+AGG | + | chr2.4:9021404-9021423 | MS.gene31360:CDS | 40.0% | |
| TTGTCCCAACTTCTCTTTGA+TGG | - | chr2.4:9021787-9021806 | None:intergenic | 40.0% | |
| TTTCATCTTTCCGAGCTCTT+TGG | - | chr2.4:9019276-9019295 | None:intergenic | 40.0% | |
| ! | AACTCCATCATTTGAGTTCG+TGG | - | chr2.4:9019650-9019669 | None:intergenic | 40.0% |
| ! | ACTTGTTTCTCAGCACAACT+TGG | + | chr2.4:9021609-9021628 | MS.gene31360:CDS | 40.0% |
| !! | AAAGAAGCATTTCGATAGCC+AGG | + | chr2.4:9019889-9019908 | MS.gene31360:CDS | 40.0% |
| !! | AGCTTTGAATTTCTCCTCTC+TGG | - | chr2.4:9020224-9020243 | None:intergenic | 40.0% |
| AAACACTGAAAATTCGGCGG+CGG | + | chr2.4:9021507-9021526 | MS.gene31360:CDS | 45.0% | |
| AACTTGGCTGTAGAGCTGTT+TGG | + | chr2.4:9021625-9021644 | MS.gene31360:CDS | 45.0% | |
| ACTTGGCTGTAGAGCTGTTT+GGG | + | chr2.4:9021626-9021645 | MS.gene31360:CDS | 45.0% | |
| AGGAGATGGAATCAAGAGAG+AGG | + | chr2.4:9019915-9019934 | MS.gene31360:CDS | 45.0% | |
| ATGACGTCCCTTTGTCAACA+AGG | + | chr2.4:9018895-9018914 | MS.gene31360:CDS | 45.0% | |
| ATGTTCTCGAATCGGACATC+CGG | - | chr2.4:9018926-9018945 | None:intergenic | 45.0% | |
| CAGTTTGAGGGATGCATGAA+GGG | + | chr2.4:9020388-9020407 | MS.gene31360:CDS | 45.0% | |
| CCTCCCATCAAAGAGAAGTT+GGG | + | chr2.4:9021780-9021799 | MS.gene31360:intron | 45.0% | |
| CCTTACAAACTATGTGGGAG+AGG | + | chr2.4:9021042-9021061 | MS.gene31360:intron | 45.0% | |
| CGGGATAACCTTGTTGACAA+AGG | - | chr2.4:9018906-9018925 | None:intergenic | 45.0% | |
| CTGTCTGACGATGACATTCT+AGG | + | chr2.4:9021268-9021287 | MS.gene31360:CDS | 45.0% | |
| GAAGTTCAAAGTAGACGCGA+AGG | + | chr2.4:9020345-9020364 | MS.gene31360:CDS | 45.0% | |
| GCAATTCAAAGGCCAAGTGA+AGG | + | chr2.4:9020021-9020040 | MS.gene31360:CDS | 45.0% | |
| GCCAAAAGAGAAGCAGTTTG+AGG | + | chr2.4:9020375-9020394 | MS.gene31360:CDS | 45.0% | |
| GCGATGTTCCTGTTAAGAAG+AGG | + | chr2.4:9018964-9018983 | MS.gene31360:CDS | 45.0% | |
| GCTACTGCATGTTCTCGAAT+CGG | - | chr2.4:9018934-9018953 | None:intergenic | 45.0% | |
| GTACTACCCCTCTTCTTAAC+AGG | - | chr2.4:9018975-9018994 | None:intergenic | 45.0% | |
| TCAGCGTCGTCATAAGAAAC+TGG | - | chr2.4:9018867-9018886 | None:intergenic | 45.0% | |
| TCCTCCCATCAAAGAGAAGT+TGG | + | chr2.4:9021779-9021798 | MS.gene31360:intron | 45.0% | |
| TCTCATTTGCATGGCCTTCA+AGG | - | chr2.4:9019775-9019794 | None:intergenic | 45.0% | |
| TCTTTGATGGGAGGAACACA+TGG | - | chr2.4:9021774-9021793 | None:intergenic | 45.0% | |
| TGAACTGAGGAGAATCTCAC+CGG | + | chr2.4:9021417-9021436 | MS.gene31360:CDS | 45.0% | |
| TTGACTGAAGGTCCTTCACT+TGG | - | chr2.4:9020036-9020055 | None:intergenic | 45.0% | |
| TTGATTCCATCTCCTTCACC+TGG | - | chr2.4:9019910-9019929 | None:intergenic | 45.0% | |
| ! | CAAGCGTTTTGCAAGCCAAA+TGG | + | chr2.4:9020258-9020277 | MS.gene31360:CDS | 45.0% |
| ! | CCCTCAAACTGCTTCTCTTT+TGG | - | chr2.4:9020379-9020398 | None:intergenic | 45.0% |
| ! | CCTCTCCCACATAGTTTGTA+AGG | - | chr2.4:9021045-9021064 | None:intergenic | 45.0% |
| ! | CGTTTGATGGACGACTTGAT+TGG | + | chr2.4:9019389-9019408 | MS.gene31360:CDS | 45.0% |
| ! | GAAAAGGTGCGAAGAAAGAG+AGG | + | chr2.4:9019724-9019743 | MS.gene31360:CDS | 45.0% |
| !! | AAGAGAGTACTCCTCTGTCA+AGG | + | chr2.4:9019096-9019115 | MS.gene31360:CDS | 45.0% |
| AAGGTGCGAAGAAAGAGAGG+TGG | + | chr2.4:9019727-9019746 | MS.gene31360:CDS | 50.0% | |
| ATCGAGCTGAAGAGACAGGA+CGG | + | chr2.4:9022531-9022550 | MS.gene31360:CDS | 50.0% | |
| CAGATTCAAGCTCCCTCGTT+TGG | - | chr2.4:9019868-9019887 | None:intergenic | 50.0% | |
| CCAACTTGATGTCTGGGTGA+AGG | + | chr2.4:9020063-9020082 | MS.gene31360:CDS | 50.0% | |
| CCCAACTTCTCTTTGATGGG+AGG | - | chr2.4:9021783-9021802 | None:intergenic | 50.0% | |
| CCTTCACCCAGACATCAAGT+TGG | - | chr2.4:9020066-9020085 | None:intergenic | 50.0% | |
| CTTGGCTGTAGAGCTGTTTG+GGG | + | chr2.4:9021627-9021646 | MS.gene31360:CDS | 50.0% | |
| GCAACTGAAAGGCCGAATGA+AGG | + | chr2.4:9019979-9019998 | MS.gene31360:CDS | 50.0% | |
| GCAGTTTGAGGGATGCATGA+AGG | + | chr2.4:9020387-9020406 | MS.gene31360:CDS | 50.0% | |
| GCATTTCGATAGCCAGGTGA+AGG | + | chr2.4:9019895-9019914 | MS.gene31360:CDS | 50.0% | |
| TGTTCTCGAATCGGACATCC+GGG | - | chr2.4:9018925-9018944 | None:intergenic | 50.0% | |
| ! | AGAATCGGCTCATAGGCGAA+AGG | + | chr2.4:9019807-9019826 | MS.gene31360:CDS | 50.0% |
| ! | GAAAGCACAGCTCCGTTTGA+TGG | + | chr2.4:9019376-9019395 | MS.gene31360:CDS | 50.0% |
| ! | GCGTTTTGCAAGCCAAATGG+AGG | + | chr2.4:9020261-9020280 | MS.gene31360:CDS | 50.0% |
| AGAGGTGGCGCTTGAGTCAA+AGG | + | chr2.4:9019742-9019761 | MS.gene31360:CDS | 55.0% | |
| CATTCTGCACGTGTTCTCGC+AGG | - | chr2.4:9022259-9022278 | None:intergenic | 55.0% | |
| CGATAGCCAGGTGAAGGAGA+TGG | + | chr2.4:9019901-9019920 | MS.gene31360:CDS | 55.0% | |
| GAAAATTCGGCGGCGGTTCT+TGG | + | chr2.4:9021514-9021533 | MS.gene31360:CDS | 55.0% | |
| TAACAGGAACATCGCGGTCG+CGG | - | chr2.4:9018959-9018978 | None:intergenic | 55.0% | |
| TCGGCTCATAGGCGAAAGGA+AGG | + | chr2.4:9019811-9019830 | MS.gene31360:CDS | 55.0% | |
| ! | GTAGAGCTGTTTGGGGCCAT+GGG | + | chr2.4:9021634-9021653 | MS.gene31360:CDS | 55.0% |
| ! | TGTAGAGCTGTTTGGGGCCA+TGG | + | chr2.4:9021633-9021652 | MS.gene31360:CDS | 55.0% |
| !! | GAGGAGTGCTCCAAAGAGCT+CGG | + | chr2.4:9019263-9019282 | MS.gene31360:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 9018825 | 9022560 | 9018825 | ID=MS.gene31360 |
| chr2.4 | mRNA | 9018825 | 9022560 | 9018825 | ID=MS.gene31360.t1;Parent=MS.gene31360 |
| chr2.4 | exon | 9018825 | 9020517 | 9018825 | ID=MS.gene31360.t1.exon1;Parent=MS.gene31360.t1 |
| chr2.4 | CDS | 9018825 | 9020517 | 9018825 | ID=cds.MS.gene31360.t1;Parent=MS.gene31360.t1 |
| chr2.4 | exon | 9021194 | 9021676 | 9021194 | ID=MS.gene31360.t1.exon2;Parent=MS.gene31360.t1 |
| chr2.4 | CDS | 9021194 | 9021676 | 9021194 | ID=cds.MS.gene31360.t1;Parent=MS.gene31360.t1 |
| chr2.4 | exon | 9022159 | 9022331 | 9022159 | ID=MS.gene31360.t1.exon3;Parent=MS.gene31360.t1 |
| chr2.4 | CDS | 9022159 | 9022331 | 9022159 | ID=cds.MS.gene31360.t1;Parent=MS.gene31360.t1 |
| chr2.4 | exon | 9022423 | 9022560 | 9022423 | ID=MS.gene31360.t1.exon4;Parent=MS.gene31360.t1 |
| chr2.4 | CDS | 9022423 | 9022560 | 9022423 | ID=cds.MS.gene31360.t1;Parent=MS.gene31360.t1 |
| Gene Sequence |
| Protein sequence |
