Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31876.t1 | XP_013466459.1 | 98.4 | 366 | 5 | 1 | 11 | 375 | 1658 | 2023 | 1.30E-158 | 569.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31876.t1 | Q3ED78 | 62.8 | 366 | 123 | 4 | 5 | 361 | 108 | 469 | 6.3e-77 | 289.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31876.t1 | A0A072VFY2 | 98.4 | 366 | 5 | 1 | 11 | 375 | 1659 | 2024 | 9.4e-159 | 569.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31876.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene31876 | 0.810588 | 1.07E-50 | -1.69E-46 |
| MS.gene049230 | MS.gene31876 | 0.873147 | 1.84E-67 | -1.69E-46 |
| MS.gene049378 | MS.gene31876 | 0.8495 | 3.11E-60 | -1.69E-46 |
| MS.gene050105 | MS.gene31876 | 0.842473 | 2.53E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene31876 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene31876 | 0.809876 | 1.52E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene31876 | 0.81134 | 7.35E-51 | -1.69E-46 |
| MS.gene050605 | MS.gene31876 | 0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene31876 | -0.825999 | 3.45E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene31876 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene31876 | 0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene31876 | 0.807847 | 4.14E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene31876 | 0.808454 | 3.07E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene31876 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene31876 | 0.815692 | 8.11E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene31876 | 0.82673 | 2.31E-54 | -1.69E-46 |
| MS.gene051368 | MS.gene31876 | 0.806134 | 9.53E-50 | -1.69E-46 |
| MS.gene051924 | MS.gene31876 | -0.837934 | 3.88E-57 | -1.69E-46 |
| MS.gene051926 | MS.gene31876 | -0.838625 | 2.57E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene31876 | 0.832039 | 1.19E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene31876 | 0.802653 | 5.06E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene31876 | 0.840082 | 1.08E-57 | -1.69E-46 |
| MS.gene052863 | MS.gene31876 | 0.81725 | 3.63E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene31876 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene31876 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene31876 | 0.813309 | 2.73E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene31876 | 0.825669 | 4.13E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene31876 | 0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene31876 | 0.804339 | 2.27E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene31876 | 0.80049 | 1.41E-48 | -1.69E-46 |
| MS.gene05510 | MS.gene31876 | 0.81567 | 8.21E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene31876 | 0.860417 | 2.10E-63 | -1.69E-46 |
| MS.gene055818 | MS.gene31876 | 0.801821 | 7.52E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene31876 | 0.833062 | 6.62E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene31876 | 0.835777 | 1.38E-56 | -1.69E-46 |
| MS.gene057026 | MS.gene31876 | 0.858365 | 8.66E-63 | -1.69E-46 |
| MS.gene058223 | MS.gene31876 | -0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene31876 | 0.811604 | 6.44E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene31876 | 0.820408 | 6.97E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene31876 | 0.801054 | 1.08E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene31876 | 0.816141 | 6.44E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene31876 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene31876 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene31876 | 0.836509 | 8.98E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene31876 | 0.836568 | 8.67E-57 | -1.69E-46 |
| MS.gene060802 | MS.gene31876 | 0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene31876 | 0.822282 | 2.58E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene31876 | -0.812343 | 4.45E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31876.t1 | MTR_1g029710 | 98.361 | 366 | 5 | 1 | 11 | 375 | 1659 | 2024 | 0.0 | 758 |
| MS.gene31876.t1 | MTR_1g029710 | 98.361 | 366 | 5 | 1 | 11 | 375 | 1658 | 2023 | 0.0 | 758 |
| MS.gene31876.t1 | MTR_1g029710 | 96.957 | 230 | 7 | 0 | 11 | 240 | 1659 | 1888 | 1.05e-154 | 478 |
| MS.gene31876.t1 | MTR_1g029710 | 96.957 | 230 | 7 | 0 | 11 | 240 | 1658 | 1887 | 1.30e-154 | 478 |
| MS.gene31876.t1 | MTR_1g029710 | 98.864 | 176 | 2 | 0 | 11 | 186 | 1658 | 1833 | 5.76e-115 | 368 |
| MS.gene31876.t1 | MTR_1g029710 | 98.864 | 176 | 2 | 0 | 11 | 186 | 1659 | 1834 | 5.78e-115 | 368 |
| MS.gene31876.t1 | MTR_1g029710 | 98.810 | 84 | 1 | 0 | 11 | 94 | 1658 | 1741 | 5.63e-46 | 169 |
| MS.gene31876.t1 | MTR_1g029710 | 98.810 | 84 | 1 | 0 | 11 | 94 | 1659 | 1742 | 5.63e-46 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31876.t1 | AT1G21580 | 61.308 | 367 | 119 | 5 | 11 | 366 | 1810 | 2164 | 1.61e-140 | 441 |
| MS.gene31876.t1 | AT1G21580 | 70.870 | 230 | 62 | 1 | 11 | 235 | 1810 | 2039 | 1.04e-107 | 347 |
| MS.gene31876.t1 | AT1G21580 | 70.619 | 194 | 52 | 1 | 11 | 199 | 1810 | 2003 | 4.03e-86 | 285 |
| MS.gene31876.t1 | AT1G21580 | 70.619 | 194 | 52 | 1 | 11 | 199 | 1810 | 2003 | 4.03e-86 | 285 |
| MS.gene31876.t1 | AT1G21580 | 68.508 | 181 | 52 | 1 | 11 | 186 | 1810 | 1990 | 3.96e-75 | 253 |
| MS.gene31876.t1 | AT1G21580 | 68.508 | 181 | 52 | 1 | 11 | 186 | 1810 | 1990 | 3.96e-75 | 253 |
| MS.gene31876.t1 | AT1G21580 | 68.508 | 181 | 52 | 1 | 11 | 186 | 1810 | 1990 | 5.28e-75 | 253 |
| MS.gene31876.t1 | AT1G21580 | 68.508 | 181 | 52 | 1 | 11 | 186 | 1810 | 1990 | 5.28e-75 | 253 |
Find 87 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGGAATGTAACCTCTTT+TGG | 0.157292 | 1.4:-14794532 | None:intergenic |
| AATTTCCGAGTTCGTTTCTT+TGG | 0.166773 | 1.4:-14794823 | None:intergenic |
| TGCCTAAGTTTGCAGGCTTC+TGG | 0.188482 | 1.4:-14796188 | None:intergenic |
| CGGACACTTCAGAGGATTTC+AGG | 0.205586 | 1.4:+14793930 | MS.gene31876:CDS |
| TTCCACTTGCCTAAGTTTGC+AGG | 0.249050 | 1.4:-14796195 | None:intergenic |
| TGTAGGAGAACGTATATTTC+GGG | 0.268613 | 1.4:+14793872 | MS.gene31876:intron |
| AAAGAAACGAACTCGGAAAT+TGG | 0.282079 | 1.4:+14794825 | MS.gene31876:CDS |
| GTGTAGGAGAACGTATATTT+CGG | 0.329890 | 1.4:+14793871 | MS.gene31876:intron |
| TTATGAGTCAATTTGCAGTT+TGG | 0.355985 | 1.4:-14795030 | None:intergenic |
| GAGATGAACATAAACCATTC+AGG | 0.356110 | 1.4:-14795008 | None:intergenic |
| ATTTGCAGATATGTTCGAAT+TGG | 0.364842 | 1.4:+14794775 | MS.gene31876:intron |
| ATTTCCGAGTTCGTTTCTTT+GGG | 0.365094 | 1.4:-14794822 | None:intergenic |
| TTCACATTGACATGTCTATA+TGG | 0.366726 | 1.4:-14795290 | None:intergenic |
| AACTTTGCTATTATAGAAAC+AGG | 0.370339 | 1.4:-14796148 | None:intergenic |
| CCCGTTGAAATTTCTGAACC+TGG | 0.370725 | 1.4:+14795944 | MS.gene31876:CDS |
| TGCCTCAATCGGTACAAGTT+TGG | 0.372418 | 1.4:+14794506 | MS.gene31876:CDS |
| ATTTGTGAAGGGTTTCTTAA+GGG | 0.386422 | 1.4:+14795326 | MS.gene31876:CDS |
| CCTTCACAAATAGATGCCTT+AGG | 0.391268 | 1.4:-14795314 | None:intergenic |
| TCACTCTGTTGAGGATGTCT+TGG | 0.396450 | 1.4:-14795980 | None:intergenic |
| TATTTGTGAAGGGTTTCTTA+AGG | 0.399181 | 1.4:+14795325 | MS.gene31876:CDS |
| TCCTTCCTACTCTTTGTTTG+AGG | 0.409887 | 1.4:-14793707 | None:intergenic |
| TTTGAGGGATCATGAATGTA+AGG | 0.416603 | 1.4:-14794964 | None:intergenic |
| GCATTTGCTTCCTTGAGTAC+AGG | 0.431437 | 1.4:-14795828 | None:intergenic |
| CTTACGAGCCAACCGCTGTC+TGG | 0.435458 | 1.4:-14794881 | None:intergenic |
| GATACAGAATGGATCCTTCC+AGG | 0.437592 | 1.4:+14793907 | MS.gene31876:CDS |
| GTTCCCGTTGCGTCAAAACT+TGG | 0.437909 | 1.4:-14795806 | None:intergenic |
| CCAAAAGAGGTTACATTCCA+AGG | 0.445326 | 1.4:+14794532 | MS.gene31876:CDS |
| CTTAAGGGATATTGTGCTGA+TGG | 0.446744 | 1.4:+14795341 | MS.gene31876:CDS |
| AACGGTAGAGGGCGTTACTT+TGG | 0.450943 | 1.4:+14795914 | MS.gene31876:CDS |
| ACAAGTTTGGTTTCCAAAAG+AGG | 0.454779 | 1.4:+14794519 | MS.gene31876:CDS |
| GAATCAATGTTGACAGTGGA+TGG | 0.455429 | 1.4:+14792592 | None:intergenic |
| TTTCCTATCACTAATCTCCT+TGG | 0.458417 | 1.4:-14794549 | None:intergenic |
| TCTTTGGGTCTCTGATAAGT+TGG | 0.466038 | 1.4:-14794807 | None:intergenic |
| ATTCCAAGGAGATTAGTGAT+AGG | 0.468741 | 1.4:+14794546 | MS.gene31876:CDS |
| CCAGGTTCAGAAATTTCAAC+GGG | 0.469421 | 1.4:-14795944 | None:intergenic |
| CACAGTTGACCAATCATTTG+AGG | 0.470258 | 1.4:+14796060 | MS.gene31876:CDS |
| AAACTGCAAATTGACTCATA+AGG | 0.479230 | 1.4:+14795032 | MS.gene31876:CDS |
| ACCGATTGAGGCAGAGGATA+GGG | 0.480266 | 1.4:-14794496 | None:intergenic |
| TCCCTATCCTCTGCCTCAAT+CGG | 0.487240 | 1.4:+14794495 | MS.gene31876:CDS |
| GTTTGAGGACCAACACAAGC+TGG | 0.489116 | 1.4:-14793692 | None:intergenic |
| ACTTGTACCGATTGAGGCAG+AGG | 0.489706 | 1.4:-14794502 | None:intergenic |
| CTTCACAAATAGATGCCTTA+GGG | 0.496991 | 1.4:-14795313 | None:intergenic |
| GTCTGTACTAAGTTCCTGAA+TGG | 0.502495 | 1.4:+14794994 | MS.gene31876:CDS |
| TCATGTTCCTCACTCTGTTG+AGG | 0.504360 | 1.4:-14795989 | None:intergenic |
| CTCTGAAGTGTCCGCCTGGA+AGG | 0.505460 | 1.4:-14793921 | None:intergenic |
| CCGTTGAAATTTCTGAACCT+GGG | 0.513315 | 1.4:+14795945 | MS.gene31876:CDS |
| TGGTTCAGTTCGATACAGAA+TGG | 0.524893 | 1.4:+14793896 | MS.gene31876:CDS |
| TTAAGGGATATTGTGCTGAT+GGG | 0.525592 | 1.4:+14795342 | MS.gene31876:CDS |
| GTCCAGAAGCCTGCAAACTT+AGG | 0.530038 | 1.4:+14796186 | MS.gene31876:CDS |
| GCACACTGCCAGACAGCGGT+TGG | 0.530194 | 1.4:+14794873 | MS.gene31876:CDS |
| GGAGATCAGAACAACGGTAG+AGG | 0.536667 | 1.4:+14795902 | MS.gene31876:CDS |
| TACCGATTGAGGCAGAGGAT+AGG | 0.539737 | 1.4:-14794497 | None:intergenic |
| TTTGGGAAATGTAACAAGGA+TGG | 0.540343 | 1.4:+14794931 | MS.gene31876:CDS |
| GAACAATCAGGCATTCTCTC+CGG | 0.541323 | 1.4:-14795157 | None:intergenic |
| AATTTCTGAACCTGGGATGA+TGG | 0.542172 | 1.4:+14795952 | MS.gene31876:CDS |
| AACCAAACTTGTACCGATTG+AGG | 0.544384 | 1.4:-14794508 | None:intergenic |
| AATCCTCTGAAGTGTCCGCC+TGG | 0.545967 | 1.4:-14793925 | None:intergenic |
| GGGAAATGTAACAAGGATGG+AGG | 0.556998 | 1.4:+14794934 | MS.gene31876:CDS |
| AACTGCAGCAACAGCAAGTG+TGG | 0.559009 | 1.4:-14793642 | None:intergenic |
| TTTGAGGACCAACACAAGCT+GGG | 0.559552 | 1.4:-14793691 | None:intergenic |
| CCTAAGGCATCTATTTGTGA+AGG | 0.561509 | 1.4:+14795314 | MS.gene31876:CDS |
| TGATACCGTGGATCTTCAGT+TGG | 0.564677 | 1.4:+14796102 | MS.gene31876:CDS |
| CTAAGGCATCTATTTGTGAA+GGG | 0.567857 | 1.4:+14795315 | MS.gene31876:CDS |
| ATGTTGATGCCTCAAATGAT+TGG | 0.568553 | 1.4:-14796069 | None:intergenic |
| GGAGAACGTATATTTCGGGT+TGG | 0.571358 | 1.4:+14793876 | MS.gene31876:intron |
| CCCAGGTTCAGAAATTTCAA+CGG | 0.578777 | 1.4:-14795945 | None:intergenic |
| GAGATCAGAACAACGGTAGA+GGG | 0.585190 | 1.4:+14795903 | MS.gene31876:CDS |
| GCAACGGGAACCTGTACTCA+AGG | 0.599202 | 1.4:+14795818 | MS.gene31876:CDS |
| CAGTCTTGATGTGTATGAAG+CGG | 0.599633 | 1.4:+14796033 | MS.gene31876:CDS |
| CTTGGAGCGACCATCATCCC+AGG | 0.599643 | 1.4:-14795962 | None:intergenic |
| CTTCCAGGCGGACACTTCAG+AGG | 0.600445 | 1.4:+14793922 | MS.gene31876:CDS |
| ACATGTCAATGTGAACCCTA+AGG | 0.610155 | 1.4:+14795298 | MS.gene31876:CDS |
| AGATATGTTCGAATTGGCAA+CGG | 0.610724 | 1.4:+14794781 | MS.gene31876:intron |
| AAGAAAGACCCAGCTTGTGT+TGG | 0.613201 | 1.4:+14793683 | MS.gene31876:CDS |
| AATCAATGTTGACAGTGGAT+GGG | 0.614776 | 1.4:+14792593 | None:intergenic |
| GGAAATGTAACAAGGATGGA+GGG | 0.638135 | 1.4:+14794935 | MS.gene31876:CDS |
| ATATTGTGCTGATGGGAATG+AGG | 0.638195 | 1.4:+14795349 | MS.gene31876:CDS |
| GGATGGGCTTGAGCTTGTAA+AGG | 0.641210 | 1.4:+14792609 | MS.gene31876:CDS |
| GAGACCCAAAGAAACGAACT+CGG | 0.645153 | 1.4:+14794818 | MS.gene31876:CDS |
| AAGACATCCTCAACAGAGTG+AGG | 0.651701 | 1.4:+14795982 | MS.gene31876:CDS |
| AGTATCCAACTGAAGATCCA+CGG | 0.652683 | 1.4:-14796107 | None:intergenic |
| CACATCAAGACTGATGTAGT+CGG | 0.657143 | 1.4:-14796023 | None:intergenic |
| AAGATTTGGGAAATGTAACA+AGG | 0.682665 | 1.4:+14794927 | MS.gene31876:CDS |
| GCTTGCACACTGCCAGACAG+CGG | 0.682822 | 1.4:+14794869 | MS.gene31876:CDS |
| ACCCGAATCAATGTTGACAG+TGG | 0.705023 | 1.4:+14792588 | None:intergenic |
| AGATCAGGAGATCAGAACAA+CGG | 0.707242 | 1.4:+14795896 | MS.gene31876:CDS |
| ACAGAATGGATCCTTCCAGG+CGG | 0.770674 | 1.4:+14793910 | MS.gene31876:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTAATGACCATAA+AGG | - | chr1.4:14794332-14794351 | None:intergenic | 15.0% |
| !! | AACAATATAAAAACAGAAAA+AGG | - | chr1.4:14794364-14794383 | None:intergenic | 15.0% |
| !! | AATTGTTAATAACTTACAAA+AGG | - | chr1.4:14793589-14793608 | None:intergenic | 15.0% |
| !! | ACAATATAAAAACAGAAAAA+GGG | - | chr1.4:14794363-14794382 | None:intergenic | 15.0% |
| !! | TAATAATAGCAAAAAAGAAA+AGG | - | chr1.4:14793774-14793793 | None:intergenic | 15.0% |
| !!! | AAGGTTTTGTATATATATAT+GGG | + | chr1.4:14795051-14795070 | MS.gene31876:intron | 15.0% |
| !!! | AGTTTAATATCTTTTATGAT+TGG | + | chr1.4:14794603-14794622 | MS.gene31876:intron | 15.0% |
| !!! | GTTTAATATCTTTTATGATT+GGG | + | chr1.4:14794604-14794623 | MS.gene31876:intron | 15.0% |
| !!! | TAAGGTTTTGTATATATATA+TGG | + | chr1.4:14795050-14795069 | MS.gene31876:intron | 15.0% |
| !!! | TAATTTCTCATTATCATTTT+AGG | + | chr1.4:14793616-14793635 | MS.gene31876:intron | 15.0% |
| !! | ATTGCAATTGAATATCATTA+AGG | - | chr1.4:14793348-14793367 | None:intergenic | 20.0% |
| !! | TTACTACAAATTTCAATGAT+TGG | + | chr1.4:14792648-14792667 | MS.gene31876:intron | 20.0% |
| !!! | AGGTTTTGTATATATATATG+GGG | + | chr1.4:14795052-14795071 | MS.gene31876:intron | 20.0% |
| !!! | ATTATTTCTTGTTGAATTAC+CGG | + | chr1.4:14795387-14795406 | MS.gene31876:intron | 20.0% |
| !!! | TGATTCTGACAAATTTTTTT+TGG | + | chr1.4:14795241-14795260 | MS.gene31876:intron | 20.0% |
| !!! | TTGATTCTATGTTTTTTCAA+GGG | + | chr1.4:14794228-14794247 | MS.gene31876:intron | 20.0% |
| !!! | TTTGATTCTATGTTTTTTCA+AGG | + | chr1.4:14794227-14794246 | MS.gene31876:intron | 20.0% |
| ! | AAATGTGAGCTAAAATTCAA+TGG | - | chr1.4:14792969-14792988 | None:intergenic | 25.0% |
| ! | AGTCCAAAATTCAAATTATC+CGG | - | chr1.4:14795409-14795428 | None:intergenic | 25.0% |
| ! | CTCGAATAATAATCTTTGTA+AGG | - | chr1.4:14794742-14794761 | None:intergenic | 25.0% |
| ! | GATAACAAACAAATTTACGA+AGG | - | chr1.4:14795757-14795776 | None:intergenic | 25.0% |
| ! | TACAAATTTCAATGATTGGT+TGG | + | chr1.4:14792652-14792671 | MS.gene31876:intron | 25.0% |
| ! | TACGAATGAATTATCTGTTT+GGG | + | chr1.4:14795540-14795559 | MS.gene31876:intron | 25.0% |
| ! | TCATTTCCCTTACATATATA+TGG | - | chr1.4:14792707-14792726 | None:intergenic | 25.0% |
| ! | TTACGAATGAATTATCTGTT+TGG | + | chr1.4:14795539-14795558 | MS.gene31876:intron | 25.0% |
| ! | TTGATGCCATATATATGTAA+GGG | + | chr1.4:14792698-14792717 | MS.gene31876:intron | 25.0% |
| ! | TTGATTCATTGTGCTAAAAA+AGG | - | chr1.4:14795436-14795455 | None:intergenic | 25.0% |
| ! | TTTGATGCCATATATATGTA+AGG | + | chr1.4:14792697-14792716 | MS.gene31876:intron | 25.0% |
| !! | AAATATGTTGTTCTTTTCCA+TGG | - | chr1.4:14793206-14793225 | None:intergenic | 25.0% |
| !! | ACAAATTTCAATGATTGGTT+GGG | + | chr1.4:14792653-14792672 | MS.gene31876:intron | 25.0% |
| !! | ATACTTTGTGTGTATTTTTC+CGG | + | chr1.4:14795627-14795646 | MS.gene31876:intron | 25.0% |
| !! | CAATGAATCAATTTTGGATT+TGG | + | chr1.4:14795445-14795464 | MS.gene31876:intron | 25.0% |
| !! | TTACCGGATAATTTGAATTT+TGG | + | chr1.4:14795403-14795422 | MS.gene31876:intron | 25.0% |
| !! | TTAGCACAATGAATCAATTT+TGG | + | chr1.4:14795439-14795458 | MS.gene31876:intron | 25.0% |
| !!! | AACTTTGCTATTATAGAAAC+AGG | - | chr1.4:14796151-14796170 | None:intergenic | 25.0% |
| !!! | AATTTGTTTGTTATCAGTGT+CGG | + | chr1.4:14795762-14795781 | MS.gene31876:intron | 25.0% |
| !!! | GTTTAATTGATTTTTTGTGC+AGG | + | chr1.4:14795129-14795148 | MS.gene31876:intron | 25.0% |
| !!! | TGATTCTATGTTTTTTCAAG+GGG | + | chr1.4:14794229-14794248 | MS.gene31876:intron | 25.0% |
| AAATTAAAGAGCGGAAAACA+TGG | - | chr1.4:14793316-14793335 | None:intergenic | 30.0% | |
| AAATTTACGAAGGTTAGTGT+AGG | - | chr1.4:14795747-14795766 | None:intergenic | 30.0% | |
| AACACAACCAAATTAAAGAG+CGG | - | chr1.4:14793325-14793344 | None:intergenic | 30.0% | |
| AAGATTTGGGAAATGTAACA+AGG | + | chr1.4:14794927-14794946 | MS.gene31876:CDS | 30.0% | |
| AAGTTTAAATGAGACAGTAC+TGG | - | chr1.4:14793010-14793029 | None:intergenic | 30.0% | |
| AATAGCAAAAAAGAAAAGGC+AGG | - | chr1.4:14793770-14793789 | None:intergenic | 30.0% | |
| AATGAAGAAAGACTTAACTG+TGG | + | chr1.4:14793048-14793067 | MS.gene31876:intron | 30.0% | |
| ATTTGCAGATATGTTCGAAT+TGG | + | chr1.4:14794775-14794794 | MS.gene31876:intron | 30.0% | |
| ATTTGTGAAGGGTTTCTTAA+GGG | + | chr1.4:14795326-14795345 | MS.gene31876:CDS | 30.0% | |
| GGAAAGAAAAGAAAAAGATC+AGG | + | chr1.4:14795881-14795900 | MS.gene31876:CDS | 30.0% | |
| GGATATTAGTATTGCCTTTA+TGG | + | chr1.4:14794315-14794334 | MS.gene31876:intron | 30.0% | |
| TATTGATATGACAAAAGCTC+TGG | - | chr1.4:14793739-14793758 | None:intergenic | 30.0% | |
| TATTTGTGAAGGGTTTCTTA+AGG | + | chr1.4:14795325-14795344 | MS.gene31876:CDS | 30.0% | |
| TGGCAATTGAAAAAGTTAGA+TGG | + | chr1.4:14794845-14794864 | MS.gene31876:CDS | 30.0% | |
| TGTGTAAATGAGTATGATGA+TGG | + | chr1.4:14794088-14794107 | MS.gene31876:intron | 30.0% | |
| TTATGAGTCAATTTGCAGTT+TGG | - | chr1.4:14795033-14795052 | None:intergenic | 30.0% | |
| TTCACATTGACATGTCTATA+TGG | - | chr1.4:14795293-14795312 | None:intergenic | 30.0% | |
| ! | AAAATTCTTCTGGAAATGAC+AGG | + | chr1.4:14793141-14793160 | MS.gene31876:intron | 30.0% |
| ! | AAACTGCAAATTGACTCATA+AGG | + | chr1.4:14795032-14795051 | MS.gene31876:CDS | 30.0% |
| ! | AAATTCTTCTGGAAATGACA+GGG | + | chr1.4:14793142-14793161 | MS.gene31876:intron | 30.0% |
| ! | ATCATGCTAACAAACTTTTG+TGG | - | chr1.4:14794203-14794222 | None:intergenic | 30.0% |
| ! | ATGTTTTCCGCTCTTTAATT+TGG | + | chr1.4:14793315-14793334 | MS.gene31876:intron | 30.0% |
| ! | ATTTTGTAACAATGATACCG+TGG | + | chr1.4:14796090-14796109 | MS.gene31876:CDS | 30.0% |
| ! | CTGATCAAACTCTAAAAACA+CGG | + | chr1.4:14793998-14794017 | MS.gene31876:intron | 30.0% |
| ! | CTTAGCATTTTATGACACAA+TGG | + | chr1.4:14793973-14793992 | MS.gene31876:intron | 30.0% |
| ! | GATTTGGTATTTCAAGAACA+GGG | + | chr1.4:14795461-14795480 | MS.gene31876:intron | 30.0% |
| ! | GTCAGTTTTTCACAAGATTT+GGG | + | chr1.4:14794914-14794933 | MS.gene31876:CDS | 30.0% |
| ! | TGCAAAAAGTATGAACAATC+AGG | - | chr1.4:14795172-14795191 | None:intergenic | 30.0% |
| ! | TGTCAGTTTTTCACAAGATT+TGG | + | chr1.4:14794913-14794932 | MS.gene31876:CDS | 30.0% |
| !! | AATGAGTATGATGATGGTTA+AGG | + | chr1.4:14794094-14794113 | MS.gene31876:intron | 30.0% |
| !! | CTTTGGAAATCCAAAGTTTT+AGG | + | chr1.4:14793455-14793474 | MS.gene31876:intron | 30.0% |
| !! | GATTGTTCATACTTTTTGCA+AGG | + | chr1.4:14795172-14795191 | MS.gene31876:CDS | 30.0% |
| !!! | AAATCCAAAGTTTTAGGCAT+TGG | + | chr1.4:14793461-14793480 | MS.gene31876:intron | 30.0% |
| !!! | ATTTTTTGTGCAGGTTATTC+CGG | + | chr1.4:14795138-14795157 | MS.gene31876:intron | 30.0% |
| !!! | TCTGACAAATTTTTTTTGGC+AGG | + | chr1.4:14795245-14795264 | MS.gene31876:intron | 30.0% |
| AAAGAAACGAACTCGGAAAT+TGG | + | chr1.4:14794825-14794844 | MS.gene31876:CDS | 35.0% | |
| AAAGGACACAGATCTCATTT+AGG | - | chr1.4:14792841-14792860 | None:intergenic | 35.0% | |
| AAATTGCTTCTGTGAGAAAG+AGG | + | chr1.4:14793396-14793415 | MS.gene31876:intron | 35.0% | |
| AACTGTAGATCTGTCATTCA+TGG | + | chr1.4:14794127-14794146 | MS.gene31876:intron | 35.0% | |
| AATGAATTATCTGTTTGGGC+CGG | + | chr1.4:14795544-14795563 | MS.gene31876:intron | 35.0% | |
| AATTGCTTCTGTGAGAAAGA+GGG | + | chr1.4:14793397-14793416 | MS.gene31876:intron | 35.0% | |
| AATTTCCGAGTTCGTTTCTT+TGG | - | chr1.4:14794826-14794845 | None:intergenic | 35.0% | |
| ACACTCGTGCAAAATATACA+AGG | - | chr1.4:14792905-14792924 | None:intergenic | 35.0% | |
| AGATATGTTCGAATTGGCAA+CGG | + | chr1.4:14794781-14794800 | MS.gene31876:intron | 35.0% | |
| ATGACTAAAGCAAAGTCAAG+AGG | + | chr1.4:14792723-14792742 | MS.gene31876:intron | 35.0% | |
| ATGTTGATGCCTCAAATGAT+TGG | - | chr1.4:14796072-14796091 | None:intergenic | 35.0% | |
| ATTCCAAGGAGATTAGTGAT+AGG | + | chr1.4:14794546-14794565 | MS.gene31876:CDS | 35.0% | |
| ATTTCCAAAGAGAAAACCCA+CGG | - | chr1.4:14793445-14793464 | None:intergenic | 35.0% | |
| ATTTCCGAGTTCGTTTCTTT+GGG | - | chr1.4:14794825-14794844 | None:intergenic | 35.0% | |
| CAAAATATACAAGGTCTCCA+GGG | - | chr1.4:14792896-14792915 | None:intergenic | 35.0% | |
| CATCAATTGTGCATTTCAGA+TGG | - | chr1.4:14792865-14792884 | None:intergenic | 35.0% | |
| CTCAACTAACAAACCCTTTA+CGG | - | chr1.4:14794039-14794058 | None:intergenic | 35.0% | |
| CTTCACAAATAGATGCCTTA+GGG | - | chr1.4:14795316-14795335 | None:intergenic | 35.0% | |
| CTTTATGCTTACTCTGACTT+TGG | + | chr1.4:14793833-14793852 | MS.gene31876:intron | 35.0% | |
| GAGATGAACATAAACCATTC+AGG | - | chr1.4:14795011-14795030 | None:intergenic | 35.0% | |
| GTGTAGGAGAACGTATATTT+CGG | + | chr1.4:14793871-14793890 | MS.gene31876:intron | 35.0% | |
| TATTCACCTACTTTCTGCAT+AGG | - | chr1.4:14794675-14794694 | None:intergenic | 35.0% | |
| TGACTAAAGCAAAGTCAAGA+GGG | + | chr1.4:14792724-14792743 | MS.gene31876:intron | 35.0% | |
| TGTAGGAGAACGTATATTTC+GGG | + | chr1.4:14793872-14793891 | MS.gene31876:intron | 35.0% | |
| TTGTGCATTTCAGATGGAAA+AGG | - | chr1.4:14792859-14792878 | None:intergenic | 35.0% | |
| TTTCCTATCACTAATCTCCT+TGG | - | chr1.4:14794552-14794571 | None:intergenic | 35.0% | |
| TTTGAGGGATCATGAATGTA+AGG | - | chr1.4:14794967-14794986 | None:intergenic | 35.0% | |
| TTTGGGAAATGTAACAAGGA+TGG | + | chr1.4:14794931-14794950 | MS.gene31876:CDS | 35.0% | |
| ! | AAGTCAAACTTGCTTGGAAA+AGG | - | chr1.4:14794403-14794422 | None:intergenic | 35.0% |
| ! | ACAAGTTTGGTTTCCAAAAG+AGG | + | chr1.4:14794519-14794538 | MS.gene31876:CDS | 35.0% |
| ! | AGTACAGACAGCAATTTTTG+AGG | - | chr1.4:14794983-14795002 | None:intergenic | 35.0% |
| ! | CAAAACAAGTCAAACTTGCT+TGG | - | chr1.4:14794409-14794428 | None:intergenic | 35.0% |
| ! | CAATTGATGATTGATAACCC+TGG | + | chr1.4:14792876-14792895 | MS.gene31876:intron | 35.0% |
| ! | CTAAGGCATCTATTTGTGAA+GGG | + | chr1.4:14795315-14795334 | MS.gene31876:CDS | 35.0% |
| ! | CTTGGTAGCAAAAATTCTTC+TGG | + | chr1.4:14793131-14793150 | MS.gene31876:intron | 35.0% |
| ! | GGATTTGGTATTTCAAGAAC+AGG | + | chr1.4:14795460-14795479 | MS.gene31876:intron | 35.0% |
| ! | GTACAGACAGCAATTTTTGA+GGG | - | chr1.4:14794982-14795001 | None:intergenic | 35.0% |
| ! | TGTATATTTTGCACGAGTGT+TGG | + | chr1.4:14792905-14792924 | MS.gene31876:intron | 35.0% |
| ! | TTAAGGGATATTGTGCTGAT+GGG | + | chr1.4:14795342-14795361 | MS.gene31876:CDS | 35.0% |
| !!! | ATTTTAGCTCACATTTGCTG+AGG | + | chr1.4:14792973-14792992 | MS.gene31876:intron | 35.0% |
| !!! | TTCTATGTTTTTTCAAGGGG+AGG | + | chr1.4:14794232-14794251 | MS.gene31876:intron | 35.0% |
| !!! | TTTCCCCTGCTTTGTTTTTT+CGG | - | chr1.4:14795866-14795885 | None:intergenic | 35.0% |
| AACAACCAGAGAAGAGTTAC+CGG | - | chr1.4:14795566-14795585 | None:intergenic | 40.0% | |
| AACACTGCCAACATAGCAAT+CGG | - | chr1.4:14795602-14795621 | None:intergenic | 40.0% | |
| AACTAACAAACCCTTTACGG+AGG | - | chr1.4:14794036-14794055 | None:intergenic | 40.0% | |
| AATTTCTGAACCTGGGATGA+TGG | + | chr1.4:14795952-14795971 | MS.gene31876:CDS | 40.0% | |
| ACATGTCAATGTGAACCCTA+AGG | + | chr1.4:14795298-14795317 | MS.gene31876:CDS | 40.0% | |
| ACTAAAGCAAAGTCAAGAGG+GGG | + | chr1.4:14792726-14792745 | MS.gene31876:intron | 40.0% | |
| AGATCAGGAGATCAGAACAA+CGG | + | chr1.4:14795896-14795915 | MS.gene31876:CDS | 40.0% | |
| AGTATCCAACTGAAGATCCA+CGG | - | chr1.4:14796110-14796129 | None:intergenic | 40.0% | |
| AGTTGTTCCTTATCTGCAGT+CGG | + | chr1.4:14793263-14793282 | MS.gene31876:intron | 40.0% | |
| CAAGTACCTATGCAGAAAGT+AGG | + | chr1.4:14794666-14794685 | MS.gene31876:intron | 40.0% | |
| CACAGTTGACCAATCATTTG+AGG | + | chr1.4:14796060-14796079 | MS.gene31876:CDS | 40.0% | |
| CACATCAAGACTGATGTAGT+CGG | - | chr1.4:14796026-14796045 | None:intergenic | 40.0% | |
| CAGTCTTGATGTGTATGAAG+CGG | + | chr1.4:14796033-14796052 | MS.gene31876:CDS | 40.0% | |
| CCAAAAGAGGTTACATTCCA+AGG | + | chr1.4:14794532-14794551 | MS.gene31876:CDS | 40.0% | |
| CCAAAGAATGAACTGTTAGC+CGG | - | chr1.4:14795649-14795668 | None:intergenic | 40.0% | |
| CCAGGTTCAGAAATTTCAAC+GGG | - | chr1.4:14795947-14795966 | None:intergenic | 40.0% | |
| CCCAGGTTCAGAAATTTCAA+CGG | - | chr1.4:14795948-14795967 | None:intergenic | 40.0% | |
| CCGTTGAAATTTCTGAACCT+GGG | + | chr1.4:14795945-14795964 | MS.gene31876:CDS | 40.0% | |
| CCTTCACAAATAGATGCCTT+AGG | - | chr1.4:14795317-14795336 | None:intergenic | 40.0% | |
| CTTAAGGGATATTGTGCTGA+TGG | + | chr1.4:14795341-14795360 | MS.gene31876:CDS | 40.0% | |
| GAAGTAGCGGTTAATTGTGT+AGG | + | chr1.4:14793855-14793874 | MS.gene31876:intron | 40.0% | |
| GACTAAAGCAAAGTCAAGAG+GGG | + | chr1.4:14792725-14792744 | MS.gene31876:intron | 40.0% | |
| GATCTGTCATTCATGGAAGT+AGG | + | chr1.4:14794134-14794153 | MS.gene31876:intron | 40.0% | |
| GCAAAATATACAAGGTCTCC+AGG | - | chr1.4:14792897-14792916 | None:intergenic | 40.0% | |
| GCACTCAAAGAAAGCTAATG+AGG | + | chr1.4:14793520-14793539 | MS.gene31876:intron | 40.0% | |
| GCAGAAAGTAGGTGAATAAG+AGG | + | chr1.4:14794677-14794696 | MS.gene31876:intron | 40.0% | |
| GCTATTTACTCCTCCGTAAA+GGG | + | chr1.4:14794023-14794042 | MS.gene31876:intron | 40.0% | |
| GGAAATGTAACAAGGATGGA+GGG | + | chr1.4:14794935-14794954 | MS.gene31876:CDS | 40.0% | |
| GGTTAGTGTAGGATCACAAT+AGG | - | chr1.4:14795736-14795755 | None:intergenic | 40.0% | |
| GTCTGTACTAAGTTCCTGAA+TGG | + | chr1.4:14794994-14795013 | MS.gene31876:CDS | 40.0% | |
| TCCTCAAACAAAGAGTAGGA+AGG | + | chr1.4:14793706-14793725 | MS.gene31876:intron | 40.0% | |
| TCTTTGGGTCTCTGATAAGT+TGG | - | chr1.4:14794810-14794829 | None:intergenic | 40.0% | |
| TGGCACTATAAAGGTCAATC+TGG | + | chr1.4:14795490-14795509 | MS.gene31876:intron | 40.0% | |
| TGGTTCAGTTCGATACAGAA+TGG | + | chr1.4:14793896-14793915 | MS.gene31876:CDS | 40.0% | |
| TGTAGGATCACAATAGGAGA+AGG | - | chr1.4:14795730-14795749 | None:intergenic | 40.0% | |
| TTAAAGAGCGGAAAACATGG+AGG | - | chr1.4:14793313-14793332 | None:intergenic | 40.0% | |
| TTGGTCCTCAAACAAAGAGT+AGG | + | chr1.4:14793702-14793721 | MS.gene31876:intron | 40.0% | |
| TTTCCAAAGAGAAAACCCAC+GGG | - | chr1.4:14793444-14793463 | None:intergenic | 40.0% | |
| ! | ATATTGTGCTGATGGGAATG+AGG | + | chr1.4:14795349-14795368 | MS.gene31876:CDS | 40.0% |
| ! | CCTAAGGCATCTATTTGTGA+AGG | + | chr1.4:14795314-14795333 | MS.gene31876:CDS | 40.0% |
| ! | CCTTGGAATGTAACCTCTTT+TGG | - | chr1.4:14794535-14794554 | None:intergenic | 40.0% |
| ! | CTTCCTTTTGCTACAATGCT+GGG | + | chr1.4:14794293-14794312 | MS.gene31876:intron | 40.0% |
| ! | GAAAGCTAATGAGGTTAGTC+TGG | + | chr1.4:14793529-14793548 | MS.gene31876:intron | 40.0% |
| ! | TACTCTGACTTTGGAAGTAG+CGG | + | chr1.4:14793842-14793861 | MS.gene31876:intron | 40.0% |
| ! | TCAGAGGATTTCAGGTGAAT+TGG | + | chr1.4:14793938-14793957 | MS.gene31876:intron | 40.0% |
| ! | TCCTTCCTACTCTTTGTTTG+AGG | - | chr1.4:14793710-14793729 | None:intergenic | 40.0% |
| ! | TGCTATTTACTCCTCCGTAA+AGG | + | chr1.4:14794022-14794041 | MS.gene31876:intron | 40.0% |
| ! | TTCCTTTTGCTACAATGCTG+GGG | + | chr1.4:14794294-14794313 | MS.gene31876:intron | 40.0% |
| ! | TTGGTGGGTCTAGTTTAAAG+TGG | + | chr1.4:14793480-14793499 | MS.gene31876:intron | 40.0% |
| ! | TTTTACCACTCTTGTCTCCA+TGG | + | chr1.4:14793186-14793205 | MS.gene31876:intron | 40.0% |
| !! | AACCAAACTTGTACCGATTG+AGG | - | chr1.4:14794511-14794530 | None:intergenic | 40.0% |
| !! | TATGATGATGGTTAAGGTGC+AGG | + | chr1.4:14794100-14794119 | MS.gene31876:intron | 40.0% |
| !!! | CCAAAGTTTTAGGCATTGGT+GGG | + | chr1.4:14793465-14793484 | MS.gene31876:intron | 40.0% |
| !!! | TCCAAAGTTTTAGGCATTGG+TGG | + | chr1.4:14793464-14793483 | MS.gene31876:intron | 40.0% |
| !!! | TTCCCCTGCTTTGTTTTTTC+GGG | - | chr1.4:14795865-14795884 | None:intergenic | 40.0% |
| AAGAAAGACCCAGCTTGTGT+TGG | + | chr1.4:14793683-14793702 | MS.gene31876:CDS | 45.0% | |
| AAGACATCCTCAACAGAGTG+AGG | + | chr1.4:14795982-14796001 | MS.gene31876:CDS | 45.0% | |
| ACCAAGTGTCCACACTAATG+AGG | - | chr1.4:14793117-14793136 | None:intergenic | 45.0% | |
| ACCACCCGAAAAAACAAAGC+AGG | + | chr1.4:14795858-14795877 | MS.gene31876:CDS | 45.0% | |
| ACCTTCTAACGCAATAGCAG+TGG | + | chr1.4:14792777-14792796 | MS.gene31876:intron | 45.0% | |
| AGAGGGATACTGTATACACC+AGG | + | chr1.4:14793414-14793433 | MS.gene31876:intron | 45.0% | |
| AGCGACCACATTCAATTCGT+TGG | - | chr1.4:14795079-14795098 | None:intergenic | 45.0% | |
| AGGATCACAATAGGAGAAGG+AGG | - | chr1.4:14795727-14795746 | None:intergenic | 45.0% | |
| ATCACAATAGGAGAAGGAGG+CGG | - | chr1.4:14795724-14795743 | None:intergenic | 45.0% | |
| ATCCCCAGCATTGTAGCAAA+AGG | - | chr1.4:14794299-14794318 | None:intergenic | 45.0% | |
| CACCCGAAAAAACAAAGCAG+GGG | + | chr1.4:14795860-14795879 | MS.gene31876:CDS | 45.0% | |
| CCACCCGAAAAAACAAAGCA+GGG | + | chr1.4:14795859-14795878 | MS.gene31876:CDS | 45.0% | |
| CCAGCATTGTAGCAAAAGGA+AGG | - | chr1.4:14794295-14794314 | None:intergenic | 45.0% | |
| CCCACCAATGCCTAAAACTT+TGG | - | chr1.4:14793468-14793487 | None:intergenic | 45.0% | |
| CCCGTTGAAATTTCTGAACC+TGG | + | chr1.4:14795944-14795963 | MS.gene31876:CDS | 45.0% | |
| CCGGCTAACAGTTCATTCTT+TGG | + | chr1.4:14795646-14795665 | MS.gene31876:intron | 45.0% | |
| CCTTCTAACGCAATAGCAGT+GGG | + | chr1.4:14792778-14792797 | MS.gene31876:intron | 45.0% | |
| CTAAAGCAAAGTCAAGAGGG+GGG | + | chr1.4:14792727-14792746 | MS.gene31876:intron | 45.0% | |
| CTTCAAGAGCCTCATTAGTG+TGG | + | chr1.4:14793105-14793124 | MS.gene31876:intron | 45.0% | |
| CTTCTCTGGTTGTTCTTCTC+TGG | + | chr1.4:14795572-14795591 | MS.gene31876:intron | 45.0% | |
| GAACAATCAGGCATTCTCTC+CGG | - | chr1.4:14795160-14795179 | None:intergenic | 45.0% | |
| GAGACCCAAAGAAACGAACT+CGG | + | chr1.4:14794818-14794837 | MS.gene31876:CDS | 45.0% | |
| GAGATCAGAACAACGGTAGA+GGG | + | chr1.4:14795903-14795922 | MS.gene31876:CDS | 45.0% | |
| GATACAGAATGGATCCTTCC+AGG | + | chr1.4:14793907-14793926 | MS.gene31876:CDS | 45.0% | |
| GCATTTGCTTCCTTGAGTAC+AGG | - | chr1.4:14795831-14795850 | None:intergenic | 45.0% | |
| GGACTCTAGGCATTATCAGA+AGG | + | chr1.4:14793163-14793182 | MS.gene31876:intron | 45.0% | |
| GGGAAATGTAACAAGGATGG+AGG | + | chr1.4:14794934-14794953 | MS.gene31876:CDS | 45.0% | |
| GTTGTTCCTTATCTGCAGTC+GGG | + | chr1.4:14793264-14793283 | MS.gene31876:intron | 45.0% | |
| TAAAGCAAAGTCAAGAGGGG+GGG | + | chr1.4:14792728-14792747 | MS.gene31876:intron | 45.0% | |
| TAACGCAATAGCAGTGGGAA+TGG | + | chr1.4:14792783-14792802 | MS.gene31876:intron | 45.0% | |
| TAAGTACCCGACTGCAGATA+AGG | - | chr1.4:14793273-14793292 | None:intergenic | 45.0% | |
| TCACTCTGTTGAGGATGTCT+TGG | - | chr1.4:14795983-14796002 | None:intergenic | 45.0% | |
| TCATGTTCCTCACTCTGTTG+AGG | - | chr1.4:14795992-14796011 | None:intergenic | 45.0% | |
| TGATACCGTGGATCTTCAGT+TGG | + | chr1.4:14796102-14796121 | MS.gene31876:CDS | 45.0% | |
| TGCCTCAATCGGTACAAGTT+TGG | + | chr1.4:14794506-14794525 | MS.gene31876:CDS | 45.0% | |
| TGGATTGCATTTGCAGTAGC+TGG | + | chr1.4:14793068-14793087 | MS.gene31876:intron | 45.0% | |
| TGGTTGTCCGATTGCTATGT+TGG | + | chr1.4:14795592-14795611 | MS.gene31876:intron | 45.0% | |
| TTTCAAGAACAGGGTGTGCT+TGG | + | chr1.4:14795470-14795489 | MS.gene31876:intron | 45.0% | |
| TTTGAGGACCAACACAAGCT+GGG | - | chr1.4:14793694-14793713 | None:intergenic | 45.0% | |
| ! | CCTTCCTTTTGCTACAATGC+TGG | + | chr1.4:14794292-14794311 | MS.gene31876:intron | 45.0% |
| ! | CTCACATTTGCTGAGGATTC+TGG | + | chr1.4:14792980-14792999 | MS.gene31876:intron | 45.0% |
| ! | CTTTTCCATGGAGACAAGAG+TGG | - | chr1.4:14793194-14793213 | None:intergenic | 45.0% |
| ! | GGAGAACGTATATTTCGGGT+TGG | + | chr1.4:14793876-14793895 | MS.gene31876:intron | 45.0% |
| !! | CTGTCCAAGTTTTGACGCAA+CGG | + | chr1.4:14795802-14795821 | MS.gene31876:CDS | 45.0% |
| !! | TGTCCAAGTTTTGACGCAAC+GGG | + | chr1.4:14795803-14795822 | MS.gene31876:CDS | 45.0% |
| AACTGCAGCAACAGCAAGTG+TGG | - | chr1.4:14793645-14793664 | None:intergenic | 50.0% | |
| ACAGAATGGATCCTTCCAGG+CGG | + | chr1.4:14793910-14793929 | MS.gene31876:CDS | 50.0% | |
| ACCGATTGAGGCAGAGGATA+GGG | - | chr1.4:14794499-14794518 | None:intergenic | 50.0% | |
| CCCACTGCTATTGCGTTAGA+AGG | - | chr1.4:14792781-14792800 | None:intergenic | 50.0% | |
| CGGACACTTCAGAGGATTTC+AGG | + | chr1.4:14793930-14793949 | MS.gene31876:CDS | 50.0% | |
| CTGGAAATGACAGGGACTCT+AGG | + | chr1.4:14793150-14793169 | MS.gene31876:intron | 50.0% | |
| GAGGCATGTAGATAAGCAGC+AGG | - | chr1.4:14795702-14795721 | None:intergenic | 50.0% | |
| GCATGTAGATAAGCAGCAGG+AGG | - | chr1.4:14795699-14795718 | None:intergenic | 50.0% | |
| GCCTCATTAGTGTGGACACT+TGG | + | chr1.4:14793113-14793132 | MS.gene31876:intron | 50.0% | |
| GGAGATCAGAACAACGGTAG+AGG | + | chr1.4:14795902-14795921 | MS.gene31876:CDS | 50.0% | |
| GGGGTCCAACGAATTGAATG+TGG | + | chr1.4:14795071-14795090 | MS.gene31876:intron | 50.0% | |
| GGGTGTGCTTGGCACTATAA+AGG | + | chr1.4:14795481-14795500 | MS.gene31876:intron | 50.0% | |
| GTTCCCGTTGCGTCAAAACT+TGG | - | chr1.4:14795809-14795828 | None:intergenic | 50.0% | |
| GTTTGAGGACCAACACAAGC+TGG | - | chr1.4:14793695-14793714 | None:intergenic | 50.0% | |
| TCCCTATCCTCTGCCTCAAT+CGG | + | chr1.4:14794495-14794514 | MS.gene31876:CDS | 50.0% | |
| ! | GGATGGGCTTGAGCTTGTAA+AGG | + | chr1.4:14792609-14792628 | MS.gene31876:CDS | 50.0% |
| ! | TACCGATTGAGGCAGAGGAT+AGG | - | chr1.4:14794500-14794519 | None:intergenic | 50.0% |
| !! | AACGGTAGAGGGCGTTACTT+TGG | + | chr1.4:14795914-14795933 | MS.gene31876:CDS | 50.0% |
| !! | ACTTGTACCGATTGAGGCAG+AGG | - | chr1.4:14794505-14794524 | None:intergenic | 50.0% |
| !!! | CCCTGCTTTGTTTTTTCGGG+TGG | - | chr1.4:14795862-14795881 | None:intergenic | 50.0% |
| ACAATAGGAGAAGGAGGCGG+AGG | - | chr1.4:14795721-14795740 | None:intergenic | 55.0% | |
| GCAACGGGAACCTGTACTCA+AGG | + | chr1.4:14795818-14795837 | MS.gene31876:CDS | 55.0% | |
| TATACACCAGGTCGACCCGT+GGG | + | chr1.4:14793426-14793445 | MS.gene31876:intron | 55.0% | |
| TTGGGCCGGTAACTCTTCTC+TGG | + | chr1.4:14795558-14795577 | MS.gene31876:intron | 55.0% | |
| ! | AAAGTCAAGAGGGGGGGTGT+GGG | + | chr1.4:14792734-14792753 | MS.gene31876:intron | 55.0% |
| ! | CGACCCGTGGGTTTTCTCTT+TGG | + | chr1.4:14793438-14793457 | MS.gene31876:intron | 55.0% |
| !! | AATCCTCTGAAGTGTCCGCC+TGG | - | chr1.4:14793928-14793947 | None:intergenic | 55.0% |
| AGAAAACCCACGGGTCGACC+TGG | - | chr1.4:14793435-14793454 | None:intergenic | 60.0% | |
| CAAAGTCAAGAGGGGGGGTG+TGG | + | chr1.4:14792733-14792752 | MS.gene31876:intron | 60.0% | |
| CTTACGAGCCAACCGCTGTC+TGG | - | chr1.4:14794884-14794903 | None:intergenic | 60.0% | |
| CTTCCAGGCGGACACTTCAG+AGG | + | chr1.4:14793922-14793941 | MS.gene31876:CDS | 60.0% | |
| CTTGGAGCGACCATCATCCC+AGG | - | chr1.4:14795965-14795984 | None:intergenic | 60.0% | |
| GCTTGCACACTGCCAGACAG+CGG | + | chr1.4:14794869-14794888 | MS.gene31876:CDS | 60.0% | |
| GTATACACCAGGTCGACCCG+TGG | + | chr1.4:14793425-14793444 | MS.gene31876:intron | 60.0% | |
| !! | CTCTGAAGTGTCCGCCTGGA+AGG | - | chr1.4:14793924-14793943 | None:intergenic | 60.0% |
| GCACACTGCCAGACAGCGGT+TGG | + | chr1.4:14794873-14794892 | MS.gene31876:CDS | 65.0% | |
| ! | GAGGGGGGGTGTGGGCAATG+TGG | + | chr1.4:14792742-14792761 | MS.gene31876:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 14792598 | 14796207 | 14792598 | ID=MS.gene31876 |
| chr1.4 | mRNA | 14792598 | 14796207 | 14792598 | ID=MS.gene31876.t1;Parent=MS.gene31876 |
| chr1.4 | exon | 14792598 | 14792630 | 14792598 | ID=MS.gene31876.t1.exon1;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14792598 | 14792630 | 14792598 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14793638 | 14793719 | 14793638 | ID=MS.gene31876.t1.exon2;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14793638 | 14793719 | 14793638 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14793877 | 14793951 | 14793877 | ID=MS.gene31876.t1.exon3;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14793877 | 14793951 | 14793877 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14794487 | 14794577 | 14794487 | ID=MS.gene31876.t1.exon4;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14794487 | 14794577 | 14794487 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14794783 | 14795053 | 14794783 | ID=MS.gene31876.t1.exon5;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14794783 | 14795053 | 14794783 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14795151 | 14795193 | 14795151 | ID=MS.gene31876.t1.exon6;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14795151 | 14795193 | 14795151 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14795267 | 14795370 | 14795267 | ID=MS.gene31876.t1.exon7;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14795267 | 14795370 | 14795267 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| chr1.4 | exon | 14795779 | 14796207 | 14795779 | ID=MS.gene31876.t1.exon8;Parent=MS.gene31876.t1 |
| chr1.4 | CDS | 14795779 | 14796207 | 14795779 | ID=cds.MS.gene31876.t1;Parent=MS.gene31876.t1 |
| Gene Sequence |
| Protein sequence |
