Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33907.t1 | XP_013469576.1 | 100 | 141 | 0 | 0 | 1 | 141 | 116 | 256 | 1.10E-73 | 285.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33907.t1 | Q9M9G7 | 80.9 | 141 | 27 | 0 | 1 | 141 | 116 | 256 | 2.8e-62 | 239.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33907.t1 | A0A072VNL1 | 100.0 | 141 | 0 | 0 | 1 | 141 | 116 | 256 | 7.8e-74 | 285.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049756 | MS.gene33907 | 0.811663 | 6.25E-51 | -1.69E-46 |
| MS.gene050277 | MS.gene33907 | 0.83966 | 1.39E-57 | -1.69E-46 |
| MS.gene050317 | MS.gene33907 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene051245 | MS.gene33907 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene051451 | MS.gene33907 | 0.826889 | 2.12E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene33907 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene051687 | MS.gene33907 | 0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene33907 | 0.833591 | 4.88E-56 | -1.69E-46 |
| MS.gene051748 | MS.gene33907 | 0.833765 | 4.42E-56 | -1.69E-46 |
| MS.gene051756 | MS.gene33907 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene33907 | 0.837663 | 4.55E-57 | -1.69E-46 |
| MS.gene052286 | MS.gene33907 | 0.810528 | 1.10E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene33907 | 0.845921 | 3.00E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene33907 | 0.833746 | 4.47E-56 | -1.69E-46 |
| MS.gene052856 | MS.gene33907 | 0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene33907 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene053109 | MS.gene33907 | 0.814359 | 1.60E-51 | -1.69E-46 |
| MS.gene053437 | MS.gene33907 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene33907 | 0.800215 | 1.60E-48 | -1.69E-46 |
| MS.gene055174 | MS.gene33907 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene055424 | MS.gene33907 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene055591 | MS.gene33907 | -0.836104 | 1.14E-56 | -1.69E-46 |
| MS.gene056631 | MS.gene33907 | 0.803664 | 3.13E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene33907 | 0.847969 | 8.26E-60 | -1.69E-46 |
| MS.gene057094 | MS.gene33907 | 0.840017 | 1.12E-57 | -1.69E-46 |
| MS.gene057234 | MS.gene33907 | 0.862299 | 5.59E-64 | -1.69E-46 |
| MS.gene058055 | MS.gene33907 | 0.821271 | 4.41E-53 | -1.69E-46 |
| MS.gene058074 | MS.gene33907 | 0.81988 | 9.21E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene33907 | 0.845508 | 3.89E-59 | -1.69E-46 |
| MS.gene058238 | MS.gene33907 | 0.837797 | 4.21E-57 | -1.69E-46 |
| MS.gene058399 | MS.gene33907 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene33907 | 0.83806 | 3.60E-57 | -1.69E-46 |
| MS.gene059171 | MS.gene33907 | 0.808624 | 2.83E-50 | -1.69E-46 |
| MS.gene059898 | MS.gene33907 | 0.828447 | 8.95E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene33907 | 0.851039 | 1.15E-60 | -1.69E-46 |
| MS.gene060463 | MS.gene33907 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene060465 | MS.gene33907 | 0.821647 | 3.61E-53 | -1.69E-46 |
| MS.gene060619 | MS.gene33907 | 0.821825 | 3.29E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33907.t1 | MTR_1g097380 | 100.000 | 141 | 0 | 0 | 1 | 141 | 116 | 256 | 9.88e-103 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33907.t1 | AT1G71790 | 80.851 | 141 | 27 | 0 | 1 | 141 | 116 | 256 | 2.13e-84 | 248 |
Find 40 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGTCTTCCTCTTCTTC+TGG | 0.258033 | 1.4:+75764627 | None:intergenic |
| TGTACTGGTTAACCGATAAT+TGG | 0.318575 | 1.4:+75764608 | None:intergenic |
| TGCATATTACAGGTATACTT+TGG | 0.347203 | 1.4:-75763203 | MS.gene33907:intron |
| GGGAAGGATGATTGAAGAAA+TGG | 0.378396 | 1.4:-75763435 | MS.gene33907:CDS |
| CTTTACCTCTATTACATGTA+TGG | 0.387843 | 1.4:+75764796 | None:intergenic |
| CTTTGGGAAGACAAGAGAAA+TGG | 0.432004 | 1.4:-75763186 | MS.gene33907:CDS |
| TCGGGAACCTTCAGTCTGTC+TGG | 0.445337 | 1.4:-75764552 | MS.gene33907:CDS |
| ATTAAAGATGGCTCAAAGAC+AGG | 0.445790 | 1.4:-75764860 | MS.gene33907:intron |
| CAAAGACAGGGCAAGGTCGA+CGG | 0.449990 | 1.4:-75764847 | MS.gene33907:CDS |
| GCATATTACAGGTATACTTT+GGG | 0.451989 | 1.4:-75763202 | MS.gene33907:intron |
| GCTTGCTTCTTGATAAAGAA+AGG | 0.453915 | 1.4:-75764974 | MS.gene33907:intron |
| AAAGACAGGGCAAGGTCGAC+GGG | 0.456664 | 1.4:-75764846 | MS.gene33907:CDS |
| GCTGAGGAACTCGCTTGATC+AGG | 0.466199 | 1.4:-75763405 | MS.gene33907:intron |
| CTCATTTGCGCCACTTCAGA+CGG | 0.466227 | 1.4:+75763146 | None:intergenic |
| AAGAGGAAGACACCAATTAT+CGG | 0.467000 | 1.4:-75764620 | MS.gene33907:CDS |
| GTCTGGATCAATTAGACGTC+AGG | 0.467500 | 1.4:-75764535 | MS.gene33907:intron |
| TGTTATATTAGATGAGTATG+AGG | 0.476440 | 1.4:-75763490 | MS.gene33907:intron |
| GACTACAAATAATGAGTCAT+CGG | 0.487491 | 1.4:-75764571 | MS.gene33907:CDS |
| CAAAGTCAACATAACTGTAC+TGG | 0.498763 | 1.4:+75764593 | None:intergenic |
| ATGTGGGAAGATGAAAATGA+AGG | 0.521959 | 1.4:-75765004 | MS.gene33907:CDS |
| GATATCTAGAGGAAGGAGCA+TGG | 0.524163 | 1.4:-75764823 | MS.gene33907:CDS |
| GGATGCCATACATGTAATAG+AGG | 0.526858 | 1.4:-75764801 | MS.gene33907:intron |
| GTGCAATGCAATCAGCTCTC+GGG | 0.527836 | 1.4:+75763119 | None:intergenic |
| ACTACAAATAATGAGTCATC+GGG | 0.543741 | 1.4:-75764570 | MS.gene33907:CDS |
| GGTGCAATGCAATCAGCTCT+CGG | 0.549682 | 1.4:+75763118 | None:intergenic |
| GACATCTTTGTAACATGGGA+AGG | 0.552251 | 1.4:-75763451 | MS.gene33907:CDS |
| ACTGAGACCACCGTCTGAAG+TGG | 0.552812 | 1.4:-75763156 | MS.gene33907:CDS |
| ATATCTAGAGGAAGGAGCAT+GGG | 0.554029 | 1.4:-75764822 | MS.gene33907:CDS |
| TTAGGTGGGACCAGAAGAAG+AGG | 0.576408 | 1.4:-75764637 | MS.gene33907:intron |
| GATGGCTCAAAGACAGGGCA+AGG | 0.582436 | 1.4:-75764854 | MS.gene33907:CDS |
| ATGAGGCTATCAGTTGCTGA+TGG | 0.584016 | 1.4:-75763473 | MS.gene33907:CDS |
| CGACGGGGATATCTAGAGGA+AGG | 0.596843 | 1.4:-75764830 | MS.gene33907:CDS |
| TTAAAGATGGCTCAAAGACA+GGG | 0.602124 | 1.4:-75764859 | MS.gene33907:intron |
| TGATGGACATCTTTGTAACA+TGG | 0.618055 | 1.4:-75763456 | MS.gene33907:CDS |
| ATTTGCGCCACTTCAGACGG+TGG | 0.620496 | 1.4:+75763149 | None:intergenic |
| AGGTCGACGGGGATATCTAG+AGG | 0.636896 | 1.4:-75764834 | MS.gene33907:CDS |
| AAGAAATGGAGAGTAAGCTG+AGG | 0.653835 | 1.4:-75763421 | MS.gene33907:CDS |
| AATTGATCCAGACAGACTGA+AGG | 0.662056 | 1.4:+75764545 | None:intergenic |
| GATGGACATCTTTGTAACAT+GGG | 0.688546 | 1.4:-75763455 | MS.gene33907:CDS |
| AAGACAGGGCAAGGTCGACG+GGG | 0.707118 | 1.4:-75764845 | MS.gene33907:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAATTAGGATTAATA+GGG | + | chr1.4:75764160-75764179 | None:intergenic | 10.0% |
| !! | ATATACATTTATACAAAAGA+TGG | - | chr1.4:75764039-75764058 | MS.gene33907:intron | 15.0% |
| !! | GTTATTTAATTAGGATTAAT+AGG | + | chr1.4:75764161-75764180 | None:intergenic | 15.0% |
| !! | GTTATTTGAGTATATTATAA+TGG | - | chr1.4:75763190-75763209 | MS.gene33907:CDS | 15.0% |
| !! | TACATAATAGTCATATATTA+AGG | + | chr1.4:75764542-75764561 | None:intergenic | 15.0% |
| !! | TATTTAATTAGGATTAATAG+GGG | + | chr1.4:75764159-75764178 | None:intergenic | 15.0% |
| !!! | TAATGCATTGTTATTTAATT+AGG | + | chr1.4:75764170-75764189 | None:intergenic | 15.0% |
| !! | ATAACAGGAAAAGATTATTT+GGG | + | chr1.4:75764630-75764649 | None:intergenic | 20.0% |
| !! | ATTCTTCTTACCAATAATTA+AGG | - | chr1.4:75764472-75764491 | MS.gene33907:intron | 20.0% |
| !! | GATAATTAAGTATATTAGGT+GGG | - | chr1.4:75763816-75763835 | MS.gene33907:intron | 20.0% |
| !! | GTCATATATTAAGGATTTAA+TGG | + | chr1.4:75764533-75764552 | None:intergenic | 20.0% |
| !! | GTGTGATAATTAAGTATATT+AGG | - | chr1.4:75763812-75763831 | MS.gene33907:intron | 20.0% |
| !! | TATAACAGGAAAAGATTATT+TGG | + | chr1.4:75764631-75764650 | None:intergenic | 20.0% |
| !! | TCTTTAATGTTAATTTAGGT+GGG | - | chr1.4:75763483-75763502 | MS.gene33907:intron | 20.0% |
| !! | TGATAATTAAGTATATTAGG+TGG | - | chr1.4:75763815-75763834 | MS.gene33907:intron | 20.0% |
| !! | TTCTTCTTACCAATAATTAA+GGG | - | chr1.4:75764473-75764492 | MS.gene33907:intron | 20.0% |
| !! | TTGCTCTTTAATGTTAATTT+AGG | - | chr1.4:75763479-75763498 | MS.gene33907:CDS | 20.0% |
| !!! | TTCCTCATTACAATTTTATT+TGG | - | chr1.4:75764258-75764277 | MS.gene33907:intron | 20.0% |
| ! | ATAAACTGACCCTTAATTAT+TGG | + | chr1.4:75764485-75764504 | None:intergenic | 25.0% |
| ! | ATCAGAGTTTATTTATCCTT+AGG | + | chr1.4:75764021-75764040 | None:intergenic | 25.0% |
| ! | CTCTTTAATGTTAATTTAGG+TGG | - | chr1.4:75763482-75763501 | MS.gene33907:CDS | 25.0% |
| ! | GACCAAATAAAATTGTAATG+AGG | + | chr1.4:75764263-75764282 | None:intergenic | 25.0% |
| ! | TAAATTCAACTGAAGGTTTA+AGG | + | chr1.4:75763878-75763897 | None:intergenic | 25.0% |
| ! | TCATACTCATCTAATATAAC+AGG | + | chr1.4:75764645-75764664 | None:intergenic | 25.0% |
| ! | TCCAATTTCATGATTAAAGA+TGG | - | chr1.4:75763262-75763281 | MS.gene33907:intron | 25.0% |
| ! | TGTATGTTATTGCATATTAC+AGG | - | chr1.4:75764921-75764940 | MS.gene33907:intron | 25.0% |
| ! | TGTTATATTAGATGAGTATG+AGG | - | chr1.4:75764644-75764663 | MS.gene33907:intron | 25.0% |
| ! | TTATTCTCCATTAATTGATC+TGG | - | chr1.4:75764209-75764228 | MS.gene33907:intron | 25.0% |
| ! | TTCACTAAATCCTAAATAAC+AGG | - | chr1.4:75763942-75763961 | MS.gene33907:intron | 25.0% |
| ! | TTGAAATGTCATAGTTATGA+AGG | + | chr1.4:75764865-75764884 | None:intergenic | 25.0% |
| !! | ACTTCATTGACTGAATTATA+TGG | - | chr1.4:75763726-75763745 | MS.gene33907:intron | 25.0% |
| !! | ATTCATTTTCTTTCTCAACA+AGG | - | chr1.4:75763685-75763704 | MS.gene33907:intron | 25.0% |
| !! | CACTCTTTAACTATGTATTT+TGG | - | chr1.4:75764772-75764791 | MS.gene33907:intron | 25.0% |
| !!! | AAGTTAGTCTTAAGTGAAAT+AGG | - | chr1.4:75764358-75764377 | MS.gene33907:intron | 25.0% |
| !!! | ACATGAGTTGATAGATAAAA+AGG | + | chr1.4:75764091-75764110 | None:intergenic | 25.0% |
| !!! | CACTTAAGACTAACTTTTTT+GGG | + | chr1.4:75764354-75764373 | None:intergenic | 25.0% |
| !!! | CTTTAACTATGTATTTTGGT+AGG | - | chr1.4:75764776-75764795 | MS.gene33907:intron | 25.0% |
| !!! | TCACTTAAGACTAACTTTTT+TGG | + | chr1.4:75764355-75764374 | None:intergenic | 25.0% |
| AAAGATTGGTGGAATATATG+TGG | + | chr1.4:75763768-75763787 | None:intergenic | 30.0% | |
| AACCTTCAGTTGAATTTAGA+AGG | - | chr1.4:75763880-75763899 | MS.gene33907:intron | 30.0% | |
| ACCTTCAGTTGAATTTAGAA+GGG | - | chr1.4:75763881-75763900 | MS.gene33907:intron | 30.0% | |
| ACTACAAATAATGAGTCATC+GGG | - | chr1.4:75763564-75763583 | MS.gene33907:intron | 30.0% | |
| ATATTCCACCAATCTTTAGA+AGG | - | chr1.4:75763771-75763790 | MS.gene33907:intron | 30.0% | |
| ATCAGGTACTTCTTGATTAT+AGG | - | chr1.4:75764746-75764765 | MS.gene33907:intron | 30.0% | |
| ATTAGGATTAATAGGGGTTA+CGG | + | chr1.4:75764153-75764172 | None:intergenic | 30.0% | |
| CAATCACATGATTAGAGAAA+AGG | + | chr1.4:75763240-75763259 | None:intergenic | 30.0% | |
| CTTTACCTCTATTACATGTA+TGG | + | chr1.4:75763341-75763360 | None:intergenic | 30.0% | |
| GACTACAAATAATGAGTCAT+CGG | - | chr1.4:75763563-75763582 | MS.gene33907:intron | 30.0% | |
| GCATATTACAGGTATACTTT+GGG | - | chr1.4:75764932-75764951 | MS.gene33907:intron | 30.0% | |
| GCCATCTTTAATCATGAAAT+TGG | + | chr1.4:75763266-75763285 | None:intergenic | 30.0% | |
| GTAAACAGATGAAATTCCTA+AGG | - | chr1.4:75764002-75764021 | MS.gene33907:intron | 30.0% | |
| TGAAATAGGCATCTATCATT+CGG | - | chr1.4:75764372-75764391 | MS.gene33907:intron | 30.0% | |
| TGCATATTACAGGTATACTT+TGG | - | chr1.4:75764931-75764950 | MS.gene33907:intron | 30.0% | |
| ! | ATGGATATAGCCTGTTATTT+AGG | + | chr1.4:75763955-75763974 | None:intergenic | 30.0% |
| ! | GTGTTTTTCCAGTTGATTAA+AGG | + | chr1.4:75763411-75763430 | None:intergenic | 30.0% |
| ! | TTTACAGTCCTTCTAAAGAT+TGG | + | chr1.4:75763782-75763801 | None:intergenic | 30.0% |
| !!! | GGTACTTATTTTACATCTCT+CGG | + | chr1.4:75764333-75764352 | None:intergenic | 30.0% |
| AAGAGGAAGACACCAATTAT+CGG | - | chr1.4:75763514-75763533 | MS.gene33907:intron | 35.0% | |
| AGTAGCTTGAAGAATTATCG+AGG | - | chr1.4:75764306-75764325 | MS.gene33907:intron | 35.0% | |
| ATGTGGGAAGATGAAAATGA+AGG | - | chr1.4:75763130-75763149 | MS.gene33907:CDS | 35.0% | |
| ATTAAAGATGGCTCAAAGAC+AGG | - | chr1.4:75763274-75763293 | MS.gene33907:intron | 35.0% | |
| CAAAGTCAACATAACTGTAC+TGG | + | chr1.4:75763544-75763563 | None:intergenic | 35.0% | |
| CACTTCTCCAGATCAATTAA+TGG | + | chr1.4:75764219-75764238 | None:intergenic | 35.0% | |
| CTATGACATTTCAAACTCGA+AGG | - | chr1.4:75764871-75764890 | MS.gene33907:intron | 35.0% | |
| GAAATAGGCATCTATCATTC+GGG | - | chr1.4:75764373-75764392 | MS.gene33907:intron | 35.0% | |
| GATGGACATCTTTGTAACAT+GGG | - | chr1.4:75764679-75764698 | MS.gene33907:intron | 35.0% | |
| GCTTGCTTCTTGATAAAGAA+AGG | - | chr1.4:75763160-75763179 | MS.gene33907:CDS | 35.0% | |
| TAGAGATCAGATTGTCTTCT+TGG | - | chr1.4:75764814-75764833 | MS.gene33907:CDS | 35.0% | |
| TCCCTTCTAAATTCAACTGA+AGG | + | chr1.4:75763885-75763904 | None:intergenic | 35.0% | |
| TTAAAGATGGCTCAAAGACA+GGG | - | chr1.4:75763275-75763294 | MS.gene33907:intron | 35.0% | |
| TTAAGGCTGACAAGTGTTTA+GGG | + | chr1.4:75763861-75763880 | None:intergenic | 35.0% | |
| TTAGGATTAATAGGGGTTAC+GGG | + | chr1.4:75764152-75764171 | None:intergenic | 35.0% | |
| ! | ATGTGAAGTCAGAAAGCATA+TGG | + | chr1.4:75763974-75763993 | None:intergenic | 35.0% |
| ! | TGATGGACATCTTTGTAACA+TGG | - | chr1.4:75764678-75764697 | MS.gene33907:intron | 35.0% |
| ! | TTTAAGGCTGACAAGTGTTT+AGG | + | chr1.4:75763862-75763881 | None:intergenic | 35.0% |
| !! | ATTAAGTTGACACAAGCAAG+GGG | + | chr1.4:75764586-75764605 | None:intergenic | 35.0% |
| !! | CATTAAGTTGACACAAGCAA+GGG | + | chr1.4:75764587-75764606 | None:intergenic | 35.0% |
| !! | TGTACTGGTTAACCGATAAT+TGG | + | chr1.4:75763529-75763548 | None:intergenic | 35.0% |
| AAGAAATGGAGAGTAAGCTG+AGG | - | chr1.4:75764713-75764732 | MS.gene33907:intron | 40.0% | |
| AATTGATCCAGACAGACTGA+AGG | + | chr1.4:75763592-75763611 | None:intergenic | 40.0% | |
| CACAGCAACCTTTAATCAAC+TGG | - | chr1.4:75763400-75763419 | MS.gene33907:intron | 40.0% | |
| GACATCTTTGTAACATGGGA+AGG | - | chr1.4:75764683-75764702 | MS.gene33907:intron | 40.0% | |
| GGATGCCATACATGTAATAG+AGG | - | chr1.4:75763333-75763352 | MS.gene33907:intron | 40.0% | |
| GGGAAGGATGATTGAAGAAA+TGG | - | chr1.4:75764699-75764718 | MS.gene33907:intron | 40.0% | |
| TAAGGCTGACAAGTGTTTAG+GGG | + | chr1.4:75763860-75763879 | None:intergenic | 40.0% | |
| ! | ACAGTCCTTCTAAAGATTGG+TGG | + | chr1.4:75763779-75763798 | None:intergenic | 40.0% |
| ! | ACCCATGGTCTTGAAAACAA+AGG | + | chr1.4:75763366-75763385 | None:intergenic | 40.0% |
| ! | ATATCTAGAGGAAGGAGCAT+GGG | - | chr1.4:75763312-75763331 | MS.gene33907:intron | 40.0% |
| ! | CTTTGGGAAGACAAGAGAAA+TGG | - | chr1.4:75764948-75764967 | MS.gene33907:intron | 40.0% |
| ! | TCTGGAGAAGTGTGAACATT+AGG | - | chr1.4:75764227-75764246 | MS.gene33907:intron | 40.0% |
| !! | GCATTAAGTTGACACAAGCA+AGG | + | chr1.4:75764588-75764607 | None:intergenic | 40.0% |
| !!! | ATGTATTTTGGTAGGAGAGC+TGG | - | chr1.4:75764784-75764803 | MS.gene33907:intron | 40.0% |
| !!! | GCCTTTGTTTTCAAGACCAT+GGG | - | chr1.4:75763362-75763381 | MS.gene33907:intron | 40.0% |
| !!! | GTGTTGCTTTTATCAACCCA+TGG | + | chr1.4:75763381-75763400 | None:intergenic | 40.0% |
| !!! | TGCCTTTGTTTTCAAGACCA+TGG | - | chr1.4:75763361-75763380 | MS.gene33907:intron | 40.0% |
| !!! | TGTATTTTGGTAGGAGAGCT+GGG | - | chr1.4:75764785-75764804 | MS.gene33907:intron | 40.0% |
| AGAACAATCAGAGAACACGC+TGG | - | chr1.4:75764433-75764452 | MS.gene33907:intron | 45.0% | |
| ATGAGGCTATCAGTTGCTGA+TGG | - | chr1.4:75764661-75764680 | MS.gene33907:intron | 45.0% | |
| GATATCTAGAGGAAGGAGCA+TGG | - | chr1.4:75763311-75763330 | MS.gene33907:intron | 45.0% | |
| GTCTGGATCAATTAGACGTC+AGG | - | chr1.4:75763599-75763618 | MS.gene33907:intron | 45.0% | |
| ! | TTGGTGTCTTCCTCTTCTTC+TGG | + | chr1.4:75763510-75763529 | None:intergenic | 45.0% |
| CTCATTTGCGCCACTTCAGA+CGG | + | chr1.4:75764991-75765010 | None:intergenic | 50.0% | |
| TTAGGTGGGACCAGAAGAAG+AGG | - | chr1.4:75763497-75763516 | MS.gene33907:intron | 50.0% | |
| TTTGGTAGGAGAGCTGGGTT+GGG | - | chr1.4:75764790-75764809 | MS.gene33907:intron | 50.0% | |
| ! | TTTTGGTAGGAGAGCTGGGT+TGG | - | chr1.4:75764789-75764808 | MS.gene33907:intron | 50.0% |
| AAAGACAGGGCAAGGTCGAC+GGG | - | chr1.4:75763288-75763307 | MS.gene33907:intron | 55.0% | |
| ACTGAGACCACCGTCTGAAG+TGG | - | chr1.4:75764978-75764997 | MS.gene33907:CDS | 55.0% | |
| AGGTCGACGGGGATATCTAG+AGG | - | chr1.4:75763300-75763319 | MS.gene33907:intron | 55.0% | |
| ATTTGCGCCACTTCAGACGG+TGG | + | chr1.4:75764988-75765007 | None:intergenic | 55.0% | |
| CAAAGACAGGGCAAGGTCGA+CGG | - | chr1.4:75763287-75763306 | MS.gene33907:intron | 55.0% | |
| CGACGGGGATATCTAGAGGA+AGG | - | chr1.4:75763304-75763323 | MS.gene33907:intron | 55.0% | |
| GATGGCTCAAAGACAGGGCA+AGG | - | chr1.4:75763280-75763299 | MS.gene33907:intron | 55.0% | |
| GCTGAGGAACTCGCTTGATC+AGG | - | chr1.4:75764729-75764748 | MS.gene33907:intron | 55.0% | |
| TCGGGAACCTTCAGTCTGTC+TGG | - | chr1.4:75763582-75763601 | MS.gene33907:intron | 55.0% | |
| AAGACAGGGCAAGGTCGACG+GGG | - | chr1.4:75763289-75763308 | MS.gene33907:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 75763130 | 75765026 | 75763130 | ID=MS.gene33907 |
| chr1.4 | mRNA | 75763130 | 75765026 | 75763130 | ID=MS.gene33907.t1;Parent=MS.gene33907 |
| chr1.4 | exon | 75764975 | 75765026 | 75764975 | ID=MS.gene33907.t1.exon1;Parent=MS.gene33907.t1 |
| chr1.4 | CDS | 75764975 | 75765026 | 75764975 | ID=cds.MS.gene33907.t1;Parent=MS.gene33907.t1 |
| chr1.4 | exon | 75764802 | 75764875 | 75764802 | ID=MS.gene33907.t1.exon2;Parent=MS.gene33907.t1 |
| chr1.4 | CDS | 75764802 | 75764875 | 75764802 | ID=cds.MS.gene33907.t1;Parent=MS.gene33907.t1 |
| chr1.4 | exon | 75764536 | 75764655 | 75764536 | ID=MS.gene33907.t1.exon3;Parent=MS.gene33907.t1 |
| chr1.4 | CDS | 75764536 | 75764655 | 75764536 | ID=cds.MS.gene33907.t1;Parent=MS.gene33907.t1 |
| chr1.4 | exon | 75763406 | 75763501 | 75763406 | ID=MS.gene33907.t1.exon4;Parent=MS.gene33907.t1 |
| chr1.4 | CDS | 75763406 | 75763501 | 75763406 | ID=cds.MS.gene33907.t1;Parent=MS.gene33907.t1 |
| chr1.4 | exon | 75763130 | 75763213 | 75763130 | ID=MS.gene33907.t1.exon5;Parent=MS.gene33907.t1 |
| chr1.4 | CDS | 75763130 | 75763213 | 75763130 | ID=cds.MS.gene33907.t1;Parent=MS.gene33907.t1 |
| Gene Sequence |
| Protein sequence |
