Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42128.t1 | XP_003623468.1 | 98 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 5.60E-48 | 199.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42128.t1 | G7KV21 | 98.0 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 4.0e-48 | 199.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049208 | MS.gene42128 | 0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene42128 | 0.812407 | 4.31E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene42128 | 0.822114 | 2.82E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene42128 | 0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene42128 | 0.817512 | 3.17E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene42128 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene051831 | MS.gene42128 | 0.818898 | 1.54E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene42128 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene42128 | 0.829491 | 5.00E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene42128 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene42128 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene42128 | 0.820326 | 7.28E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene42128 | 0.836873 | 7.25E-57 | -1.69E-46 |
| MS.gene055314 | MS.gene42128 | 0.815042 | 1.13E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene42128 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene42128 | 0.829408 | 5.24E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene42128 | 0.802425 | 5.64E-49 | -1.69E-46 |
| MS.gene056403 | MS.gene42128 | 0.82769 | 1.36E-54 | -1.69E-46 |
| MS.gene056605 | MS.gene42128 | 0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene056638 | MS.gene42128 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene42128 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene42128 | 0.81593 | 7.18E-52 | -1.69E-46 |
| MS.gene056901 | MS.gene42128 | 0.830021 | 3.71E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene42128 | 0.817095 | 3.94E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene42128 | 0.821336 | 4.26E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene42128 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene42128 | 0.806499 | 7.99E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene42128 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene42128 | 0.818174 | 2.25E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene42128 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene42128 | 0.804048 | 2.60E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene42128 | 0.824777 | 6.72E-54 | -1.69E-46 |
| MS.gene060870 | MS.gene42128 | 0.817921 | 2.57E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42128.t1 | MTR_7g071210 | 98.000 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 1.34e-67 | 197 |
| MS.gene42128.t1 | MTR_3g072010 | 63.415 | 82 | 30 | 0 | 12 | 93 | 66 | 147 | 2.66e-35 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42128.t1 | AT2G38450 | 80.000 | 85 | 16 | 1 | 12 | 95 | 53 | 137 | 3.21e-46 | 145 |
| MS.gene42128.t1 | AT5G05360 | 67.416 | 89 | 29 | 0 | 6 | 94 | 71 | 159 | 2.47e-41 | 134 |
| MS.gene42128.t1 | AT5G05360 | 64.634 | 82 | 29 | 0 | 6 | 87 | 71 | 152 | 4.81e-36 | 120 |
| MS.gene42128.t1 | AT2G38450 | 76.471 | 51 | 11 | 1 | 12 | 61 | 53 | 103 | 1.82e-23 | 87.4 |
Find 24 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTGAAACGTTGGTTTA+AGG | 0.206492 | 7.3:+33362505 | MS.gene42128:CDS |
| GTTGGTTTAAGGATACTCTT+AGG | 0.251388 | 7.3:+33362516 | MS.gene42128:CDS |
| TGATGTTAATATGCAGATTT+TGG | 0.257808 | 7.3:+33362553 | MS.gene42128:CDS |
| GGATATATGGAGAGCAGTAT+AGG | 0.337976 | 7.3:+33362437 | None:intergenic |
| CGAGGGTTAGGTCTTCAGTT+TGG | 0.387633 | 7.3:+33364453 | MS.gene42128:CDS |
| GATATATGGAGAGCAGTATA+GGG | 0.394996 | 7.3:+33362438 | None:intergenic |
| TGACAAAAGCATCGAGGGTT+AGG | 0.410197 | 7.3:+33364441 | MS.gene42128:CDS |
| AGGTCTTCAGTTTGGAAAGT+TGG | 0.443829 | 7.3:+33364461 | MS.gene42128:CDS |
| GTTGGTCAGATGTATTATAG+TGG | 0.448023 | 7.3:+33362575 | MS.gene42128:CDS |
| GAGAGCAGTATAGGGAAAGA+TGG | 0.460620 | 7.3:+33362446 | MS.gene42128:CDS |
| TTGGTTTAAGGATACTCTTA+GGG | 0.499307 | 7.3:+33362517 | MS.gene42128:CDS |
| GTATAGGGAAAGATGGAAAC+GGG | 0.507255 | 7.3:+33362453 | MS.gene42128:CDS |
| TCTGCCACAACCCCAGATAG+AGG | 0.532783 | 7.3:-33362482 | None:intergenic |
| ACTCTTAGGGAGGCTAAAGC+TGG | 0.533054 | 7.3:+33362530 | MS.gene42128:CDS |
| CAGATGTATTATAGTGGCTA+TGG | 0.541971 | 7.3:+33362581 | MS.gene42128:CDS |
| AAAGTTGGAGATAAGCGTCC+AGG | 0.548549 | 7.3:+33364476 | MS.gene42128:CDS |
| TGGGAATGAAGGGAAAACTT+TGG | 0.550885 | 7.3:+33364417 | MS.gene42128:intron |
| AGTATAGGGAAAGATGGAAA+CGG | 0.551781 | 7.3:+33362452 | MS.gene42128:CDS |
| TGGCAGATTGTGTGAAACGT+TGG | 0.602973 | 7.3:+33362498 | MS.gene42128:CDS |
| GTTTAAGGATACTCTTAGGG+AGG | 0.610668 | 7.3:+33362520 | MS.gene42128:CDS |
| TTGGCTGACAAAAGCATCGA+GGG | 0.617055 | 7.3:+33364436 | MS.gene42128:CDS |
| TGTTGCAAAAGATGCTCAGA+AGG | 0.654531 | 7.3:+33362604 | MS.gene42128:CDS |
| TGACTCTGATGCATCAAACG+AGG | 0.684174 | 7.3:+33364604 | MS.gene42128:CDS |
| TTTGGCTGACAAAAGCATCG+AGG | 0.704862 | 7.3:+33364435 | MS.gene42128:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTCATAAAAATGTG+TGG | - | chr7.3:33364063-33364082 | None:intergenic | 15.0% |
| !! | TATTTGAATATATAGAGTAA+TGG | + | chr7.3:33364300-33364319 | MS.gene42128:intron | 15.0% |
| !!! | TAACTTTTAATTTATGTTTC+TGG | + | chr7.3:33363833-33363852 | MS.gene42128:intron | 15.0% |
| !!! | TTTAATTTATATATCAGAAG+TGG | + | chr7.3:33364245-33364264 | MS.gene42128:intron | 15.0% |
| !! | AAAATAAAATAATGCTGAGT+TGG | + | chr7.3:33363670-33363689 | MS.gene42128:intron | 20.0% |
| !! | AAATAAAATAATGCTGAGTT+GGG | + | chr7.3:33363671-33363690 | MS.gene42128:intron | 20.0% |
| !! | AAATATGAAGTAAAGTATGA+AGG | - | chr7.3:33363796-33363815 | None:intergenic | 20.0% |
| !! | AATATGAAGTAAAGTATGAA+GGG | - | chr7.3:33363795-33363814 | None:intergenic | 20.0% |
| !! | AATATTGCATGATAATAGTT+AGG | + | chr7.3:33362745-33362764 | MS.gene42128:intron | 20.0% |
| !! | ACCACTATTATATATCATAT+CGG | + | chr7.3:33363460-33363479 | MS.gene42128:intron | 20.0% |
| !! | ACTAATTTCTTTATTCACTT+TGG | - | chr7.3:33363096-33363115 | None:intergenic | 20.0% |
| !! | ATAATTACGAATGTTAGTAA+TGG | + | chr7.3:33363215-33363234 | MS.gene42128:intron | 20.0% |
| !! | CTGATATATAAATTAAAGCA+AGG | - | chr7.3:33364242-33364261 | None:intergenic | 20.0% |
| !! | TAAAGAAATGAATAAAACCT+AGG | + | chr7.3:33362786-33362805 | MS.gene42128:intron | 20.0% |
| !! | TAAAGAAATTAGTAAAACCT+AGG | + | chr7.3:33363103-33363122 | MS.gene42128:intron | 20.0% |
| !!! | ATGTCTTAAATTTGAAGTAT+CGG | + | chr7.3:33363253-33363272 | MS.gene42128:intron | 20.0% |
| !!! | TTAAGTTGCATTGAATTTTT+TGG | + | chr7.3:33362677-33362696 | MS.gene42128:intron | 20.0% |
| !!! | TTTCTTTGTTTTCTTGTTTT+TGG | + | chr7.3:33362631-33362650 | MS.gene42128:intron | 20.0% |
| ! | AATAAAATAATGCTGAGTTG+GGG | + | chr7.3:33363672-33363691 | MS.gene42128:intron | 25.0% |
| ! | ATTATTTGTTTGGGAATGAA+GGG | + | chr7.3:33364407-33364426 | MS.gene42128:intron | 25.0% |
| ! | CCACTATTATATATCATATC+GGG | + | chr7.3:33363461-33363480 | MS.gene42128:intron | 25.0% |
| ! | CTAATCTTCACATATAAAAC+AGG | - | chr7.3:33364100-33364119 | None:intergenic | 25.0% |
| ! | GAGGTTAACATTATTTGTTT+GGG | + | chr7.3:33364398-33364417 | MS.gene42128:intron | 25.0% |
| ! | GATATATAATAGTGGTTTAG+CGG | - | chr7.3:33363456-33363475 | None:intergenic | 25.0% |
| ! | TAAAATCCAATGAGAAAAAG+TGG | - | chr7.3:33363910-33363929 | None:intergenic | 25.0% |
| ! | TGTGAAGATTAGAAAAACAT+TGG | + | chr7.3:33364108-33364127 | MS.gene42128:intron | 25.0% |
| ! | TGTTAGCATTTACAAGTATT+AGG | - | chr7.3:33363314-33363333 | None:intergenic | 25.0% |
| ! | TTATATATCATATCGGGATT+TGG | + | chr7.3:33363467-33363486 | MS.gene42128:intron | 25.0% |
| !! | TCATAAAAATGTGTGGATTT+TGG | - | chr7.3:33364056-33364075 | None:intergenic | 25.0% |
| !! | TGATGTTAATATGCAGATTT+TGG | + | chr7.3:33362553-33362572 | MS.gene42128:CDS | 25.0% |
| !! | TTTGTTGCTGCATTTTTATT+AGG | + | chr7.3:33364563-33364582 | MS.gene42128:intron | 25.0% |
| !!! | ACTTTTTCTCATTGGATTTT+AGG | + | chr7.3:33363909-33363928 | MS.gene42128:intron | 25.0% |
| AACATTGGAAGTTCTATTGT+AGG | + | chr7.3:33364123-33364142 | MS.gene42128:intron | 30.0% | |
| ATAAGCTGCTAAAACATTAG+AGG | - | chr7.3:33364506-33364525 | None:intergenic | 30.0% | |
| CATTATTTGTTTGGGAATGA+AGG | + | chr7.3:33364406-33364425 | MS.gene42128:intron | 30.0% | |
| CCCGATATGATATATAATAG+TGG | - | chr7.3:33363464-33363483 | None:intergenic | 30.0% | |
| CTATAGCAGTTATTGCATAT+TGG | + | chr7.3:33363565-33363584 | MS.gene42128:intron | 30.0% | |
| GGAGGTTAACATTATTTGTT+TGG | + | chr7.3:33364397-33364416 | MS.gene42128:intron | 30.0% | |
| TAAAACATTAGAGGTTTACC+TGG | - | chr7.3:33364497-33364516 | None:intergenic | 30.0% | |
| TTAGCAACACTAACTTACAA+AGG | - | chr7.3:33364541-33364560 | None:intergenic | 30.0% | |
| TTGGTTTAAGGATACTCTTA+GGG | + | chr7.3:33362517-33362536 | MS.gene42128:CDS | 30.0% | |
| ! | AGCAGTGAAATTTTGCAAAT+CGG | + | chr7.3:33363542-33363561 | MS.gene42128:intron | 30.0% |
| !! | GCGTTTTAACATCATTAAAC+TGG | - | chr7.3:33364199-33364218 | None:intergenic | 30.0% |
| !! | GTTAATATGCAGATTTTGGT+TGG | + | chr7.3:33362557-33362576 | MS.gene42128:CDS | 30.0% |
| !!! | ACTTGAAAGTCTTTTGAAGT+TGG | + | chr7.3:33364157-33364176 | MS.gene42128:intron | 30.0% |
| !!! | CATTGAATTTTTTGGTTGGT+TGG | + | chr7.3:33362685-33362704 | MS.gene42128:intron | 30.0% |
| !!! | CTTGAAAGTCTTTTGAAGTT+GGG | + | chr7.3:33364158-33364177 | MS.gene42128:intron | 30.0% |
| !!! | GTTGCATTGAATTTTTTGGT+TGG | + | chr7.3:33362681-33362700 | MS.gene42128:intron | 30.0% |
| !!! | TTGGTTGGTGTTGATTTTTT+GGG | + | chr7.3:33362700-33362719 | MS.gene42128:intron | 30.0% |
| AGTATAGGGAAAGATGGAAA+CGG | + | chr7.3:33362452-33362471 | MS.gene42128:CDS | 35.0% | |
| ATTGGAAGTTCTATTGTAGG+TGG | + | chr7.3:33364126-33364145 | MS.gene42128:intron | 35.0% | |
| CAGATGTATTATAGTGGCTA+TGG | + | chr7.3:33362581-33362600 | MS.gene42128:CDS | 35.0% | |
| GTCGAATCACAATAGGATAT+CGG | - | chr7.3:33363510-33363529 | None:intergenic | 35.0% | |
| GTTGGTCAGATGTATTATAG+TGG | + | chr7.3:33362575-33362594 | MS.gene42128:CDS | 35.0% | |
| TATGAAGTATGAACAATGCG+TGG | + | chr7.3:33364329-33364348 | MS.gene42128:intron | 35.0% | |
| TATTGATAAAACTGTCGTGG+AGG | + | chr7.3:33363957-33363976 | MS.gene42128:intron | 35.0% | |
| TTAATGATGAGAGGTTACCT+AGG | - | chr7.3:33363735-33363754 | None:intergenic | 35.0% | |
| ! | AAACGCAATGATTTGTGCTT+TGG | + | chr7.3:33364213-33364232 | MS.gene42128:intron | 35.0% |
| ! | CGAAGATAGAAGTTGATTGT+TGG | + | chr7.3:33362872-33362891 | MS.gene42128:intron | 35.0% |
| ! | GCTAACAACGCTTTAAATCA+CGG | + | chr7.3:33362962-33362981 | MS.gene42128:intron | 35.0% |
| ! | GTACTTGTTTGTCTGTCTTT+TGG | + | chr7.3:33364370-33364389 | MS.gene42128:intron | 35.0% |
| ! | GTTGGTTTAAGGATACTCTT+AGG | + | chr7.3:33362516-33362535 | MS.gene42128:CDS | 35.0% |
| ! | GTTTTATCAATAGCGAATCG+CGG | - | chr7.3:33363949-33363968 | None:intergenic | 35.0% |
| !! | GCTAACAACGTTTTAAGTCA+CGG | + | chr7.3:33363327-33363346 | MS.gene42128:intron | 35.0% |
| !! | TGTTTGTCTGTCTTTTGGTT+TGG | + | chr7.3:33364375-33364394 | MS.gene42128:intron | 35.0% |
| !! | TTGTGTGAAACGTTGGTTTA+AGG | + | chr7.3:33362505-33362524 | MS.gene42128:CDS | 35.0% |
| !!! | GTTGGTTGGTGTTGATTTTT+TGG | + | chr7.3:33362699-33362718 | MS.gene42128:intron | 35.0% |
| !!! | GTTTGTCTGTCTTTTGGTTT+GGG | + | chr7.3:33364376-33364395 | MS.gene42128:intron | 35.0% |
| AGAAAAAGTGGATAGCGTAG+CGG | - | chr7.3:33363898-33363917 | None:intergenic | 40.0% | |
| AGAAGCGGTTTAATGATGAG+AGG | - | chr7.3:33363744-33363763 | None:intergenic | 40.0% | |
| AGGTCTTCAGTTTGGAAAGT+TGG | + | chr7.3:33364461-33364480 | MS.gene42128:CDS | 40.0% | |
| AGTCGTAGTCGAATCACAAT+AGG | - | chr7.3:33363517-33363536 | None:intergenic | 40.0% | |
| CGCTATTGATAAAACTGTCG+TGG | + | chr7.3:33363954-33363973 | MS.gene42128:intron | 40.0% | |
| GAGCTGCGTTGTTAAATAAC+TGG | + | chr7.3:33363423-33363442 | MS.gene42128:intron | 40.0% | |
| GGGAAGAGAGAAAGATGAAA+AGG | - | chr7.3:33363775-33363794 | None:intergenic | 40.0% | |
| GTATAGGGAAAGATGGAAAC+GGG | + | chr7.3:33362453-33362472 | MS.gene42128:CDS | 40.0% | |
| GTTTAAGGATACTCTTAGGG+AGG | + | chr7.3:33362520-33362539 | MS.gene42128:CDS | 40.0% | |
| TATTGCTTAGATTGCAGTCG+TGG | + | chr7.3:33363998-33364017 | MS.gene42128:intron | 40.0% | |
| TCAGGTGTTCATATGTGTGT+CGG | - | chr7.3:33362817-33362836 | None:intergenic | 40.0% | |
| TGCAATGCTTGGTATTGCAA+TGG | + | chr7.3:33363356-33363375 | MS.gene42128:intron | 40.0% | |
| TGGGAATGAAGGGAAAACTT+TGG | + | chr7.3:33364417-33364436 | MS.gene42128:intron | 40.0% | |
| TGTTGCAAAAGATGCTCAGA+AGG | + | chr7.3:33362604-33362623 | MS.gene42128:CDS | 40.0% | |
| ! | AGATGATATGGCCTTGATTG+CGG | + | chr7.3:33363384-33363403 | MS.gene42128:intron | 40.0% |
| ! | CAATACCAAGCATTGCAATG+TGG | - | chr7.3:33363353-33363372 | None:intergenic | 40.0% |
| !! | GCAATGGATTGCAGATGATA+TGG | + | chr7.3:33363372-33363391 | MS.gene42128:intron | 40.0% |
| !!! | CGCTATCCACTTTTTCTCAT+TGG | + | chr7.3:33363901-33363920 | MS.gene42128:intron | 40.0% |
| !!! | TAGGATATCGGCTTTTGTCA+CGG | - | chr7.3:33363498-33363517 | None:intergenic | 40.0% |
| AAAGTTGGAGATAAGCGTCC+AGG | + | chr7.3:33364476-33364495 | MS.gene42128:CDS | 45.0% | |
| ATCGCAACACAACTGCATTG+AGG | - | chr7.3:33363033-33363052 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | - | chr7.3:33363729-33363748 | None:intergenic | 45.0% | |
| ATGCAGTTGTGTTGCGATTG+TGG | + | chr7.3:33363035-33363054 | MS.gene42128:intron | 45.0% | |
| GAAAAAGTGGATAGCGTAGC+GGG | - | chr7.3:33363897-33363916 | None:intergenic | 45.0% | |
| GAAAAGGCAGAACTCAGAAG+CGG | - | chr7.3:33363759-33363778 | None:intergenic | 45.0% | |
| GAGAGCAGTATAGGGAAAGA+TGG | + | chr7.3:33362446-33362465 | MS.gene42128:CDS | 45.0% | |
| GCGAAGAATTGCAGCTGATA+TGG | + | chr7.3:33363007-33363026 | MS.gene42128:intron | 45.0% | |
| GTCATGTCTGGTATTCGTGT+CGG | - | chr7.3:33363134-33363153 | None:intergenic | 45.0% | |
| TAGCGAATCGCGGAAAATTG+TGG | - | chr7.3:33363939-33363958 | None:intergenic | 45.0% | |
| TGAACAATGCGTGGAGTCTT+TGG | + | chr7.3:33364338-33364357 | MS.gene42128:intron | 45.0% | |
| TGACTCTGATGCATCAAACG+AGG | + | chr7.3:33364604-33364623 | MS.gene42128:CDS | 45.0% | |
| TGAGAGGTTACCTAGGTAGT+GGG | - | chr7.3:33363728-33363747 | None:intergenic | 45.0% | |
| TGCAAAAGATGCTCAGAAGG+TGG | + | chr7.3:33362607-33362626 | MS.gene42128:intron | 45.0% | |
| TGGCAGATTGTGTGAAACGT+TGG | + | chr7.3:33362498-33362517 | MS.gene42128:CDS | 45.0% | |
| TGTCATTGTCGTGTCATGTC+TGG | - | chr7.3:33363146-33363165 | None:intergenic | 45.0% | |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | - | chr7.3:33363720-33363739 | None:intergenic | 45.0% |
| !! | TATTCGTGTCGGTTCTACCT+AGG | - | chr7.3:33363123-33363142 | None:intergenic | 45.0% |
| !! | TGACAAAAGCATCGAGGGTT+AGG | + | chr7.3:33364441-33364460 | MS.gene42128:CDS | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | - | chr7.3:33363721-33363740 | None:intergenic | 45.0% |
| !! | TTGGCTGACAAAAGCATCGA+GGG | + | chr7.3:33364436-33364455 | MS.gene42128:CDS | 45.0% |
| !! | TTTGGCTGACAAAAGCATCG+AGG | + | chr7.3:33364435-33364454 | MS.gene42128:CDS | 45.0% |
| !! | TTTTCCTCTATCTGGGGTTG+TGG | + | chr7.3:33362478-33362497 | MS.gene42128:CDS | 45.0% |
| !!! | TGTCTGTCTTTTGGTTTGGG+AGG | + | chr7.3:33364379-33364398 | MS.gene42128:intron | 45.0% |
| !!! | ATATTTTTAATATTATGATT+TGG | - | chr7.3:33363616-33363635 | None:intergenic | 5.0% |
| !!! | TATTTTTAATATTATGATTT+GGG | - | chr7.3:33363615-33363634 | None:intergenic | 5.0% |
| ACTCTTAGGGAGGCTAAAGC+TGG | + | chr7.3:33362530-33362549 | MS.gene42128:CDS | 50.0% | |
| CGAGGGTTAGGTCTTCAGTT+TGG | + | chr7.3:33364453-33364472 | MS.gene42128:CDS | 50.0% | |
| CTACGTGTCAGTGTCATGTC+AGG | - | chr7.3:33362835-33362854 | None:intergenic | 50.0% | |
| GAGAGGTTACCTAGGTAGTG+GGG | - | chr7.3:33363727-33363746 | None:intergenic | 50.0% | |
| TCGCAACACAACCGCAATCA+AGG | - | chr7.3:33363398-33363417 | None:intergenic | 50.0% | |
| TTGCGGTTGTGTTGCGATTG+TGG | + | chr7.3:33363401-33363420 | MS.gene42128:intron | 50.0% | |
| ! | AACGGGCGTTTTCCTCTATC+TGG | + | chr7.3:33362470-33362489 | MS.gene42128:CDS | 50.0% |
| ! | ACGGGCGTTTTCCTCTATCT+GGG | + | chr7.3:33362471-33362490 | MS.gene42128:CDS | 50.0% |
| ! | ATGCTGAGTTGGGGATGAGA+TGG | + | chr7.3:33363681-33363700 | MS.gene42128:intron | 50.0% |
| ! | CAACACTGAGCATTGCAACG+TGG | - | chr7.3:33362988-33363007 | None:intergenic | 50.0% |
| ! | TATGTGTGTCGGTGCTTCCT+AGG | - | chr7.3:33362806-33362825 | None:intergenic | 50.0% |
| ! | TGCTGAGTTGGGGATGAGAT+GGG | + | chr7.3:33363682-33363701 | MS.gene42128:intron | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | - | chr7.3:33363719-33363738 | None:intergenic | 50.0% |
| ACCCCTAAACCCCACTACCT+AGG | + | chr7.3:33363715-33363734 | MS.gene42128:intron | 55.0% | |
| CACGGCCACATTGCAATGCT+TGG | + | chr7.3:33363345-33363364 | MS.gene42128:intron | 55.0% | |
| TCTGCCACAACCCCAGATAG+AGG | - | chr7.3:33362485-33362504 | None:intergenic | 55.0% | |
| ! | CGGGCGTTTTCCTCTATCTG+GGG | + | chr7.3:33362472-33362491 | MS.gene42128:CDS | 55.0% |
| ! | GCTGAGTTGGGGATGAGATG+GGG | + | chr7.3:33363683-33363702 | MS.gene42128:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 33362443 | 33364634 | 33362443 | ID=MS.gene42128 |
| chr7.3 | mRNA | 33362443 | 33364634 | 33362443 | ID=MS.gene42128.t1;Parent=MS.gene42128 |
| chr7.3 | exon | 33362443 | 33362625 | 33362443 | ID=MS.gene42128.t1.exon1;Parent=MS.gene42128.t1 |
| chr7.3 | CDS | 33362443 | 33362625 | 33362443 | ID=cds.MS.gene42128.t1;Parent=MS.gene42128.t1 |
| chr7.3 | exon | 33364428 | 33364497 | 33364428 | ID=MS.gene42128.t1.exon2;Parent=MS.gene42128.t1 |
| chr7.3 | CDS | 33364428 | 33364497 | 33364428 | ID=cds.MS.gene42128.t1;Parent=MS.gene42128.t1 |
| chr7.3 | exon | 33364585 | 33364634 | 33364585 | ID=MS.gene42128.t1.exon3;Parent=MS.gene42128.t1 |
| chr7.3 | CDS | 33364585 | 33364634 | 33364585 | ID=cds.MS.gene42128.t1;Parent=MS.gene42128.t1 |
| Gene Sequence |
| Protein sequence |
