Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43449.t1 | XP_013458671.1 | 99 | 710 | 3 | 1 | 1 | 710 | 1 | 706 | 0.00E+00 | 1178.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43449.t1 | P93008 | 88.1 | 570 | 68 | 0 | 139 | 708 | 162 | 731 | 2.0e-294 | 1012.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43449.t1 | A0A072UUE3 | 99.0 | 710 | 3 | 1 | 1 | 710 | 1 | 706 | 0.0e+00 | 1178.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04918 | MS.gene43449 | 0.804284 | 2.33E-49 | -1.69E-46 |
MS.gene04920 | MS.gene43449 | 0.821629 | 3.65E-53 | -1.69E-46 |
MS.gene049283 | MS.gene43449 | 0.846898 | 1.63E-59 | -1.69E-46 |
MS.gene049499 | MS.gene43449 | 0.863713 | 2.04E-64 | -1.69E-46 |
MS.gene049983 | MS.gene43449 | 0.814004 | 1.92E-51 | -1.69E-46 |
MS.gene050646 | MS.gene43449 | 0.814411 | 1.56E-51 | -1.69E-46 |
MS.gene050945 | MS.gene43449 | 0.809484 | 1.85E-50 | -1.69E-46 |
MS.gene051198 | MS.gene43449 | 0.808075 | 3.70E-50 | -1.69E-46 |
MS.gene051343 | MS.gene43449 | 0.829162 | 6.01E-55 | -1.69E-46 |
MS.gene051597 | MS.gene43449 | 0.830041 | 3.67E-55 | -1.69E-46 |
MS.gene051628 | MS.gene43449 | 0.810323 | 1.22E-50 | -1.69E-46 |
MS.gene052037 | MS.gene43449 | 0.812726 | 3.67E-51 | -1.69E-46 |
MS.gene052519 | MS.gene43449 | 0.806771 | 7.00E-50 | -1.69E-46 |
MS.gene052584 | MS.gene43449 | 0.801552 | 8.53E-49 | -1.69E-46 |
MS.gene052954 | MS.gene43449 | 0.81373 | 2.21E-51 | -1.69E-46 |
MS.gene053079 | MS.gene43449 | 0.820923 | 5.31E-53 | -1.69E-46 |
MS.gene05308 | MS.gene43449 | 0.806246 | 9.03E-50 | -1.69E-46 |
MS.gene053122 | MS.gene43449 | 0.802864 | 4.58E-49 | -1.69E-46 |
MS.gene053226 | MS.gene43449 | 0.803459 | 3.45E-49 | -1.69E-46 |
MS.gene053541 | MS.gene43449 | 0.816638 | 4.99E-52 | -1.69E-46 |
MS.gene053542 | MS.gene43449 | 0.828681 | 7.85E-55 | -1.69E-46 |
MS.gene053931 | MS.gene43449 | 0.809135 | 2.20E-50 | -1.69E-46 |
MS.gene054651 | MS.gene43449 | 0.835383 | 1.73E-56 | -1.69E-46 |
MS.gene054709 | MS.gene43449 | 0.806455 | 8.16E-50 | -1.69E-46 |
MS.gene054957 | MS.gene43449 | 0.82554 | 4.43E-54 | -1.69E-46 |
MS.gene055513 | MS.gene43449 | 0.802787 | 4.75E-49 | -1.69E-46 |
MS.gene055694 | MS.gene43449 | 0.800412 | 1.46E-48 | -1.69E-46 |
MS.gene055841 | MS.gene43449 | 0.807375 | 5.21E-50 | -1.69E-46 |
MS.gene056366 | MS.gene43449 | 0.813049 | 3.12E-51 | -1.69E-46 |
MS.gene056539 | MS.gene43449 | 0.802718 | 4.91E-49 | -1.69E-46 |
MS.gene056831 | MS.gene43449 | 0.812915 | 3.33E-51 | -1.69E-46 |
MS.gene05686 | MS.gene43449 | 0.809154 | 2.18E-50 | -1.69E-46 |
MS.gene057208 | MS.gene43449 | 0.861112 | 1.29E-63 | -1.69E-46 |
MS.gene05781 | MS.gene43449 | 0.80088 | 1.17E-48 | -1.69E-46 |
MS.gene058008 | MS.gene43449 | 0.840291 | 9.50E-58 | -1.69E-46 |
MS.gene058009 | MS.gene43449 | 0.840612 | 7.83E-58 | -1.69E-46 |
MS.gene058010 | MS.gene43449 | 0.819149 | 1.35E-52 | -1.69E-46 |
MS.gene058292 | MS.gene43449 | 0.803804 | 2.93E-49 | -1.69E-46 |
MS.gene058781 | MS.gene43449 | 0.882811 | 7.61E-71 | -1.69E-46 |
MS.gene058783 | MS.gene43449 | 0.869959 | 2.09E-66 | -1.69E-46 |
MS.gene058979 | MS.gene43449 | 0.802096 | 6.60E-49 | -1.69E-46 |
MS.gene059146 | MS.gene43449 | 0.816144 | 6.43E-52 | -1.69E-46 |
MS.gene059842 | MS.gene43449 | 0.807566 | 4.75E-50 | -1.69E-46 |
MS.gene060244 | MS.gene43449 | 0.832556 | 8.84E-56 | -1.69E-46 |
MS.gene060365 | MS.gene43449 | 0.822714 | 2.04E-53 | -1.69E-46 |
MS.gene060933 | MS.gene43449 | 0.823555 | 1.30E-53 | -1.69E-46 |
MS.gene060935 | MS.gene43449 | 0.854639 | 1.08E-61 | -1.69E-46 |
MS.gene060937 | MS.gene43449 | 0.855501 | 6.05E-62 | -1.69E-46 |
MS.gene061100 | MS.gene43449 | 0.834088 | 3.67E-56 | -1.69E-46 |
MS.gene061160 | MS.gene43449 | 0.804259 | 2.35E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43449.t1 | MTR_4g134170 | 97.750 | 711 | 10 | 2 | 1 | 710 | 1 | 706 | 0.0 | 1423 |
MS.gene43449.t1 | MTR_6g005320 | 89.943 | 696 | 35 | 5 | 16 | 710 | 5 | 666 | 0.0 | 1202 |
MS.gene43449.t1 | MTR_7g109720 | 40.783 | 434 | 234 | 6 | 253 | 683 | 194 | 607 | 7.88e-102 | 329 |
MS.gene43449.t1 | MTR_3g083690 | 40.972 | 432 | 231 | 6 | 274 | 694 | 128 | 546 | 1.14e-101 | 324 |
MS.gene43449.t1 | MTR_2g100230 | 41.371 | 423 | 226 | 5 | 264 | 684 | 69 | 471 | 2.82e-100 | 317 |
MS.gene43449.t1 | MTR_3g467550 | 43.069 | 404 | 192 | 7 | 275 | 665 | 101 | 479 | 1.20e-99 | 317 |
MS.gene43449.t1 | MTR_1g054630 | 39.294 | 453 | 243 | 8 | 248 | 688 | 115 | 547 | 1.27e-98 | 316 |
MS.gene43449.t1 | MTR_6g005550 | 41.446 | 415 | 218 | 5 | 272 | 683 | 146 | 538 | 1.40e-98 | 319 |
MS.gene43449.t1 | MTR_3g467550 | 44.241 | 382 | 175 | 7 | 297 | 665 | 92 | 448 | 9.53e-97 | 309 |
MS.gene43449.t1 | MTR_2g007000 | 40.326 | 429 | 232 | 5 | 259 | 683 | 472 | 880 | 2.01e-96 | 322 |
MS.gene43449.t1 | MTR_4g105100 | 39.202 | 426 | 237 | 5 | 261 | 684 | 172 | 577 | 4.10e-94 | 305 |
MS.gene43449.t1 | MTR_4g114120 | 38.263 | 426 | 238 | 6 | 274 | 687 | 123 | 535 | 1.61e-90 | 296 |
MS.gene43449.t1 | MTR_1g095810 | 36.449 | 428 | 247 | 4 | 264 | 684 | 118 | 527 | 2.82e-89 | 291 |
MS.gene43449.t1 | MTR_1g026830 | 36.111 | 432 | 243 | 6 | 264 | 684 | 120 | 529 | 8.51e-87 | 285 |
MS.gene43449.t1 | MTR_3g467550 | 41.351 | 370 | 181 | 6 | 275 | 631 | 101 | 447 | 1.02e-85 | 278 |
MS.gene43449.t1 | MTR_2g032630 | 38.657 | 432 | 239 | 6 | 271 | 699 | 476 | 884 | 1.48e-83 | 287 |
MS.gene43449.t1 | MTR_7g056830 | 36.364 | 385 | 221 | 3 | 289 | 672 | 8 | 369 | 1.82e-74 | 247 |
MS.gene43449.t1 | MTR_4g105100 | 37.838 | 370 | 208 | 5 | 261 | 628 | 172 | 521 | 3.10e-74 | 249 |
MS.gene43449.t1 | MTR_6g082080 | 36.364 | 385 | 221 | 3 | 289 | 672 | 8 | 369 | 4.31e-74 | 246 |
MS.gene43449.t1 | MTR_5g027840 | 36.855 | 407 | 225 | 6 | 288 | 685 | 101 | 484 | 5.78e-74 | 248 |
MS.gene43449.t1 | MTR_3g449250 | 40.806 | 397 | 195 | 9 | 297 | 677 | 96 | 468 | 1.07e-73 | 249 |
MS.gene43449.t1 | MTR_3g449250 | 40.806 | 397 | 195 | 9 | 297 | 677 | 96 | 468 | 4.35e-73 | 248 |
MS.gene43449.t1 | MTR_5g090120 | 39.782 | 367 | 192 | 7 | 297 | 658 | 87 | 429 | 5.83e-71 | 242 |
MS.gene43449.t1 | MTR_3g049990 | 36.148 | 379 | 216 | 4 | 291 | 665 | 152 | 508 | 1.08e-68 | 240 |
MS.gene43449.t1 | MTR_6g033070 | 31.765 | 425 | 257 | 8 | 271 | 687 | 121 | 520 | 6.79e-68 | 233 |
MS.gene43449.t1 | MTR_4g079320 | 35.476 | 389 | 225 | 5 | 297 | 682 | 25 | 390 | 8.02e-68 | 238 |
MS.gene43449.t1 | MTR_2g041140 | 36.031 | 383 | 212 | 6 | 291 | 665 | 141 | 498 | 3.59e-64 | 227 |
MS.gene43449.t1 | MTR_7g100820 | 33.570 | 423 | 250 | 9 | 266 | 683 | 106 | 502 | 1.36e-63 | 223 |
MS.gene43449.t1 | MTR_7g076830 | 31.948 | 385 | 236 | 3 | 297 | 681 | 149 | 507 | 1.32e-62 | 218 |
MS.gene43449.t1 | MTR_7g076820 | 31.948 | 385 | 236 | 4 | 297 | 681 | 156 | 514 | 2.13e-62 | 217 |
MS.gene43449.t1 | MTR_7g076800 | 31.948 | 385 | 236 | 3 | 297 | 681 | 147 | 505 | 2.14e-62 | 217 |
MS.gene43449.t1 | MTR_2g039960 | 33.254 | 421 | 234 | 7 | 258 | 668 | 17 | 400 | 3.81e-61 | 211 |
MS.gene43449.t1 | MTR_2g099620 | 34.301 | 379 | 217 | 7 | 297 | 671 | 31 | 381 | 8.98e-61 | 209 |
MS.gene43449.t1 | MTR_2g099620 | 34.301 | 379 | 217 | 7 | 297 | 671 | 47 | 397 | 9.68e-61 | 210 |
MS.gene43449.t1 | MTR_4g125970 | 34.286 | 385 | 209 | 7 | 297 | 668 | 47 | 400 | 1.12e-59 | 207 |
MS.gene43449.t1 | MTR_8g018400 | 31.050 | 438 | 261 | 7 | 251 | 684 | 10 | 410 | 1.86e-59 | 206 |
MS.gene43449.t1 | MTR_4g125970 | 34.286 | 385 | 209 | 7 | 297 | 668 | 64 | 417 | 1.08e-58 | 205 |
MS.gene43449.t1 | MTR_2g438110 | 30.390 | 385 | 242 | 4 | 287 | 670 | 30 | 389 | 1.22e-58 | 204 |
MS.gene43449.t1 | MTR_7g057250 | 32.339 | 436 | 245 | 9 | 291 | 676 | 163 | 598 | 1.19e-57 | 209 |
MS.gene43449.t1 | MTR_2g066050 | 32.732 | 388 | 230 | 5 | 291 | 672 | 53 | 415 | 5.17e-57 | 202 |
MS.gene43449.t1 | MTR_3g107420 | 34.565 | 379 | 208 | 7 | 297 | 665 | 53 | 401 | 1.13e-56 | 199 |
MS.gene43449.t1 | MTR_1g012420 | 34.037 | 379 | 210 | 7 | 297 | 665 | 53 | 401 | 5.55e-56 | 197 |
MS.gene43449.t1 | MTR_4g010565 | 34.501 | 371 | 204 | 6 | 297 | 658 | 130 | 470 | 3.34e-55 | 197 |
MS.gene43449.t1 | MTR_3g071620 | 33.943 | 383 | 211 | 9 | 297 | 657 | 22 | 384 | 1.92e-52 | 191 |
MS.gene43449.t1 | MTR_6g056080 | 36.313 | 358 | 183 | 9 | 315 | 656 | 127 | 455 | 2.09e-51 | 190 |
MS.gene43449.t1 | MTR_1g102410 | 34.694 | 392 | 197 | 10 | 296 | 656 | 49 | 412 | 3.43e-51 | 189 |
MS.gene43449.t1 | MTR_8g027780 | 31.762 | 403 | 237 | 11 | 294 | 680 | 109 | 489 | 1.40e-49 | 183 |
MS.gene43449.t1 | MTR_8g027775 | 31.818 | 396 | 230 | 10 | 302 | 680 | 113 | 485 | 5.51e-49 | 181 |
MS.gene43449.t1 | MTR_8g097000 | 28.713 | 404 | 248 | 8 | 294 | 680 | 291 | 671 | 3.39e-46 | 176 |
MS.gene43449.t1 | MTR_8g027770 | 30.348 | 402 | 244 | 9 | 294 | 680 | 204 | 584 | 5.85e-46 | 174 |
MS.gene43449.t1 | MTR_4g059460 | 27.896 | 423 | 243 | 9 | 306 | 670 | 60 | 478 | 2.17e-44 | 169 |
MS.gene43449.t1 | MTR_4g112340 | 29.921 | 381 | 227 | 10 | 303 | 670 | 109 | 462 | 9.90e-44 | 166 |
MS.gene43449.t1 | MTR_2g043360 | 28.502 | 414 | 226 | 10 | 306 | 657 | 57 | 462 | 4.79e-43 | 165 |
MS.gene43449.t1 | MTR_2g055850 | 30.435 | 391 | 233 | 9 | 291 | 669 | 91 | 454 | 4.56e-42 | 161 |
MS.gene43449.t1 | MTR_5g069330 | 29.834 | 362 | 229 | 5 | 289 | 647 | 5 | 344 | 5.47e-42 | 158 |
MS.gene43449.t1 | MTR_5g069330 | 29.834 | 362 | 229 | 5 | 289 | 647 | 1 | 340 | 5.62e-42 | 158 |
MS.gene43449.t1 | MTR_2g063080 | 28.085 | 470 | 271 | 10 | 259 | 672 | 67 | 525 | 1.85e-41 | 159 |
MS.gene43449.t1 | MTR_6g039840 | 29.487 | 390 | 243 | 7 | 297 | 672 | 116 | 487 | 3.22e-41 | 160 |
MS.gene43449.t1 | MTR_5g092560 | 30.270 | 370 | 223 | 9 | 310 | 669 | 95 | 439 | 8.38e-41 | 160 |
MS.gene43449.t1 | MTR_1g083130 | 27.804 | 428 | 244 | 7 | 290 | 672 | 25 | 432 | 5.60e-40 | 156 |
MS.gene43449.t1 | MTR_0915s0010 | 28.664 | 307 | 193 | 4 | 304 | 610 | 2 | 282 | 2.10e-39 | 147 |
MS.gene43449.t1 | MTR_4g068990 | 29.255 | 376 | 230 | 10 | 316 | 681 | 101 | 450 | 2.37e-39 | 155 |
MS.gene43449.t1 | MTR_8g027780 | 31.319 | 364 | 206 | 13 | 294 | 639 | 109 | 446 | 2.47e-39 | 151 |
MS.gene43449.t1 | MTR_8g018370 | 28.969 | 359 | 196 | 9 | 320 | 671 | 2 | 308 | 1.48e-34 | 134 |
MS.gene43449.t1 | MTR_6g039840 | 29.712 | 313 | 201 | 5 | 367 | 672 | 11 | 311 | 2.73e-31 | 129 |
MS.gene43449.t1 | MTR_4g049910 | 28.535 | 396 | 214 | 10 | 291 | 658 | 55 | 409 | 5.13e-31 | 127 |
MS.gene43449.t1 | MTR_1g061970 | 28.861 | 395 | 230 | 12 | 291 | 658 | 80 | 450 | 7.24e-30 | 124 |
MS.gene43449.t1 | MTR_2g043360 | 26.176 | 340 | 194 | 7 | 373 | 657 | 7 | 344 | 2.29e-29 | 122 |
MS.gene43449.t1 | MTR_4g112320 | 27.723 | 303 | 188 | 9 | 375 | 670 | 2 | 280 | 2.05e-28 | 118 |
MS.gene43449.t1 | MTR_5g077690 | 26.087 | 414 | 247 | 10 | 297 | 658 | 35 | 441 | 4.78e-28 | 119 |
MS.gene43449.t1 | MTR_1g022305 | 28.075 | 374 | 180 | 9 | 289 | 658 | 1 | 289 | 7.33e-28 | 118 |
MS.gene43449.t1 | MTR_4g019280 | 71.831 | 71 | 20 | 0 | 153 | 223 | 52 | 122 | 1.69e-27 | 108 |
MS.gene43449.t1 | MTR_1g046570 | 25.641 | 390 | 221 | 9 | 309 | 658 | 9 | 369 | 2.77e-27 | 115 |
MS.gene43449.t1 | MTR_8g032230 | 36.875 | 160 | 93 | 2 | 287 | 445 | 6 | 158 | 2.92e-27 | 108 |
MS.gene43449.t1 | MTR_4g459350 | 31.818 | 198 | 126 | 5 | 306 | 498 | 57 | 250 | 1.40e-25 | 107 |
MS.gene43449.t1 | MTR_4g131750 | 26.420 | 405 | 243 | 12 | 285 | 659 | 76 | 455 | 2.29e-25 | 110 |
MS.gene43449.t1 | MTR_4g077370 | 31.081 | 222 | 125 | 4 | 291 | 509 | 250 | 446 | 1.63e-23 | 104 |
MS.gene43449.t1 | MTR_4g077370 | 33.696 | 184 | 92 | 6 | 291 | 469 | 2 | 160 | 1.38e-17 | 86.7 |
MS.gene43449.t1 | MTR_3g118120 | 24.870 | 386 | 248 | 14 | 289 | 649 | 130 | 498 | 3.39e-23 | 104 |
MS.gene43449.t1 | MTR_5g092560 | 30.085 | 236 | 143 | 5 | 439 | 669 | 10 | 228 | 3.56e-23 | 104 |
MS.gene43449.t1 | MTR_1g113970 | 70.732 | 82 | 22 | 2 | 13 | 94 | 10 | 89 | 1.57e-21 | 90.1 |
MS.gene43449.t1 | MTR_4g068990 | 28.395 | 243 | 151 | 6 | 444 | 681 | 15 | 239 | 3.09e-21 | 98.6 |
MS.gene43449.t1 | MTR_3g107420 | 30.088 | 226 | 120 | 5 | 297 | 514 | 53 | 248 | 1.44e-19 | 90.5 |
MS.gene43449.t1 | MTR_8g062720 | 30.208 | 192 | 114 | 8 | 291 | 468 | 91 | 276 | 7.58e-16 | 81.6 |
MS.gene43449.t1 | MTR_8g062720 | 40.196 | 102 | 60 | 1 | 557 | 658 | 439 | 539 | 1.47e-14 | 77.8 |
MS.gene43449.t1 | MTR_2g031570 | 50.000 | 66 | 33 | 0 | 291 | 356 | 72 | 137 | 9.71e-14 | 69.3 |
MS.gene43449.t1 | MTR_8g080160 | 22.977 | 383 | 245 | 15 | 300 | 672 | 266 | 608 | 2.50e-13 | 74.3 |
MS.gene43449.t1 | MTR_8g079462 | 25.523 | 239 | 153 | 5 | 445 | 658 | 19 | 257 | 3.35e-13 | 71.6 |
MS.gene43449.t1 | MTR_1g064370 | 92.857 | 56 | 3 | 1 | 30 | 85 | 42 | 96 | 2.41e-12 | 65.9 |
MS.gene43449.t1 | MTR_8g042690 | 30.370 | 135 | 88 | 2 | 526 | 657 | 238 | 369 | 4.91e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43449.t1 | AT2G33730 | 87.648 | 591 | 73 | 0 | 118 | 708 | 141 | 731 | 0.0 | 1084 |
MS.gene43449.t1 | AT1G28180 | 70.052 | 384 | 93 | 4 | 318 | 699 | 1 | 364 | 0.0 | 550 |
MS.gene43449.t1 | AT3G58510 | 40.995 | 422 | 229 | 5 | 274 | 688 | 135 | 543 | 2.81e-104 | 331 |
MS.gene43449.t1 | AT3G58510 | 40.995 | 422 | 229 | 5 | 274 | 688 | 135 | 543 | 2.81e-104 | 331 |
MS.gene43449.t1 | AT3G58510 | 40.995 | 422 | 229 | 5 | 274 | 688 | 135 | 543 | 2.81e-104 | 331 |
MS.gene43449.t1 | AT1G55150 | 40.667 | 450 | 241 | 6 | 261 | 704 | 70 | 499 | 5.86e-103 | 324 |
MS.gene43449.t1 | AT5G63120 | 40.610 | 426 | 231 | 5 | 261 | 684 | 136 | 541 | 4.09e-102 | 325 |
MS.gene43449.t1 | AT1G55150 | 40.940 | 447 | 238 | 6 | 264 | 704 | 98 | 524 | 7.45e-102 | 322 |
MS.gene43449.t1 | AT2G42520 | 40.835 | 431 | 232 | 6 | 274 | 694 | 143 | 560 | 2.95e-101 | 324 |
MS.gene43449.t1 | AT2G42520 | 40.835 | 431 | 232 | 6 | 274 | 694 | 143 | 560 | 2.95e-101 | 324 |
MS.gene43449.t1 | AT2G42520 | 40.835 | 431 | 232 | 6 | 274 | 694 | 143 | 560 | 2.95e-101 | 324 |
MS.gene43449.t1 | AT3G58570 | 41.038 | 424 | 228 | 4 | 274 | 688 | 130 | 540 | 8.30e-101 | 323 |
MS.gene43449.t1 | AT2G47330 | 40.610 | 426 | 230 | 6 | 261 | 683 | 199 | 604 | 4.44e-99 | 322 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.627 | 429 | 235 | 5 | 259 | 683 | 498 | 906 | 1.56e-98 | 329 |
MS.gene43449.t1 | AT1G20920 | 39.052 | 443 | 244 | 6 | 245 | 683 | 148 | 568 | 2.10e-98 | 322 |
MS.gene43449.t1 | AT3G01540 | 39.173 | 411 | 225 | 5 | 276 | 683 | 144 | 532 | 2.32e-91 | 298 |
MS.gene43449.t1 | AT5G14610 | 39.806 | 412 | 221 | 6 | 276 | 683 | 147 | 535 | 2.32e-91 | 298 |
MS.gene43449.t1 | AT3G01540 | 39.173 | 411 | 225 | 5 | 276 | 683 | 144 | 532 | 2.40e-91 | 297 |
MS.gene43449.t1 | AT3G01540 | 39.173 | 411 | 225 | 5 | 276 | 683 | 144 | 532 | 2.40e-91 | 297 |
MS.gene43449.t1 | AT3G01540 | 39.173 | 411 | 225 | 5 | 276 | 683 | 144 | 532 | 2.40e-91 | 297 |
MS.gene43449.t1 | AT5G14610 | 39.806 | 412 | 221 | 6 | 276 | 683 | 147 | 535 | 2.46e-91 | 298 |
MS.gene43449.t1 | AT5G14610 | 39.806 | 412 | 221 | 6 | 276 | 683 | 155 | 543 | 3.62e-91 | 298 |
MS.gene43449.t1 | AT4G33370 | 36.818 | 440 | 247 | 6 | 256 | 684 | 61 | 480 | 2.24e-89 | 290 |
MS.gene43449.t1 | AT5G51280 | 36.866 | 434 | 243 | 6 | 261 | 684 | 117 | 529 | 1.07e-87 | 287 |
MS.gene43449.t1 | AT3G06480 | 38.221 | 416 | 232 | 5 | 271 | 683 | 416 | 809 | 4.34e-86 | 293 |
MS.gene43449.t1 | AT5G14610 | 40.470 | 383 | 201 | 6 | 305 | 683 | 45 | 404 | 3.01e-84 | 276 |
MS.gene43449.t1 | AT5G14610 | 40.470 | 383 | 201 | 6 | 305 | 683 | 45 | 404 | 3.01e-84 | 276 |
MS.gene43449.t1 | AT3G09620 | 37.063 | 429 | 217 | 6 | 259 | 683 | 365 | 744 | 7.41e-84 | 286 |
MS.gene43449.t1 | AT3G09620 | 37.063 | 429 | 217 | 6 | 259 | 683 | 366 | 745 | 1.01e-83 | 285 |
MS.gene43449.t1 | AT5G14610 | 40.260 | 385 | 203 | 6 | 303 | 683 | 242 | 603 | 7.66e-83 | 277 |
MS.gene43449.t1 | AT5G63120 | 39.554 | 359 | 195 | 5 | 261 | 617 | 136 | 474 | 1.65e-79 | 262 |
MS.gene43449.t1 | AT5G63120 | 39.554 | 359 | 195 | 5 | 261 | 617 | 136 | 474 | 1.65e-79 | 262 |
MS.gene43449.t1 | AT5G63120 | 39.554 | 359 | 195 | 5 | 261 | 617 | 136 | 474 | 1.65e-79 | 262 |
MS.gene43449.t1 | AT5G63120 | 39.554 | 359 | 195 | 5 | 261 | 617 | 136 | 474 | 1.87e-79 | 262 |
MS.gene43449.t1 | AT1G31970 | 38.575 | 407 | 217 | 8 | 289 | 685 | 115 | 498 | 3.80e-74 | 249 |
MS.gene43449.t1 | AT5G60990 | 33.835 | 399 | 242 | 3 | 289 | 682 | 8 | 389 | 8.24e-72 | 241 |
MS.gene43449.t1 | AT5G14610 | 38.177 | 351 | 190 | 6 | 276 | 622 | 155 | 482 | 1.38e-70 | 239 |
MS.gene43449.t1 | AT3G02065 | 33.255 | 424 | 260 | 5 | 265 | 683 | 83 | 488 | 6.51e-70 | 237 |
MS.gene43449.t1 | AT3G02065 | 33.255 | 424 | 260 | 5 | 265 | 683 | 83 | 488 | 6.51e-70 | 237 |
MS.gene43449.t1 | AT4G16630 | 37.731 | 379 | 210 | 5 | 291 | 665 | 168 | 524 | 1.22e-67 | 238 |
MS.gene43449.t1 | AT1G77030 | 34.961 | 389 | 227 | 5 | 297 | 682 | 35 | 400 | 1.13e-66 | 236 |
MS.gene43449.t1 | AT3G22310 | 37.569 | 362 | 197 | 6 | 297 | 653 | 123 | 460 | 1.19e-66 | 231 |
MS.gene43449.t1 | AT3G22310 | 37.569 | 362 | 197 | 6 | 297 | 653 | 123 | 460 | 1.62e-66 | 231 |
MS.gene43449.t1 | AT3G06480 | 35.376 | 359 | 207 | 5 | 271 | 626 | 416 | 752 | 6.12e-66 | 233 |
MS.gene43449.t1 | AT4G00660 | 32.817 | 387 | 234 | 4 | 297 | 683 | 138 | 498 | 9.54e-66 | 226 |
MS.gene43449.t1 | AT4G00660 | 32.817 | 387 | 234 | 4 | 297 | 683 | 138 | 498 | 9.54e-66 | 226 |
MS.gene43449.t1 | AT3G22330 | 38.017 | 363 | 200 | 8 | 294 | 653 | 108 | 448 | 1.06e-65 | 229 |
MS.gene43449.t1 | AT2G45810 | 31.948 | 385 | 234 | 5 | 297 | 680 | 161 | 518 | 2.65e-63 | 220 |
MS.gene43449.t1 | AT5G26742 | 40.107 | 374 | 191 | 9 | 295 | 658 | 105 | 455 | 4.59e-63 | 224 |
MS.gene43449.t1 | AT5G26742 | 40.107 | 374 | 191 | 9 | 295 | 658 | 105 | 455 | 4.65e-63 | 224 |
MS.gene43449.t1 | AT3G61240 | 31.443 | 388 | 238 | 5 | 297 | 683 | 131 | 491 | 6.92e-62 | 215 |
MS.gene43449.t1 | AT3G61240 | 31.443 | 388 | 238 | 5 | 297 | 683 | 131 | 491 | 6.92e-62 | 215 |
MS.gene43449.t1 | AT3G13920 | 32.737 | 391 | 233 | 5 | 297 | 684 | 46 | 409 | 8.56e-61 | 210 |
MS.gene43449.t1 | AT3G13920 | 32.737 | 391 | 233 | 5 | 297 | 684 | 36 | 399 | 9.67e-61 | 209 |
MS.gene43449.t1 | AT3G09720 | 32.391 | 460 | 274 | 13 | 258 | 706 | 106 | 539 | 1.20e-60 | 213 |
MS.gene43449.t1 | AT3G09720 | 32.391 | 460 | 274 | 13 | 258 | 706 | 106 | 539 | 1.20e-60 | 213 |
MS.gene43449.t1 | AT1G54270 | 34.565 | 379 | 216 | 5 | 297 | 671 | 46 | 396 | 1.57e-60 | 209 |
MS.gene43449.t1 | AT3G13920 | 32.921 | 404 | 233 | 7 | 297 | 697 | 50 | 418 | 1.71e-60 | 209 |
MS.gene43449.t1 | AT3G13920 | 32.921 | 404 | 233 | 7 | 297 | 697 | 46 | 414 | 2.35e-60 | 209 |
MS.gene43449.t1 | AT1G72730 | 33.690 | 374 | 218 | 4 | 291 | 661 | 42 | 388 | 8.48e-60 | 207 |
MS.gene43449.t1 | AT3G19760 | 30.729 | 384 | 240 | 4 | 288 | 670 | 33 | 391 | 2.51e-59 | 206 |
MS.gene43449.t1 | AT3G13920 | 32.982 | 379 | 224 | 5 | 309 | 684 | 53 | 404 | 4.70e-59 | 205 |
MS.gene43449.t1 | AT5G26742 | 39.942 | 343 | 175 | 8 | 319 | 653 | 38 | 357 | 6.24e-59 | 211 |
MS.gene43449.t1 | AT1G16280 | 32.368 | 380 | 226 | 4 | 297 | 670 | 65 | 419 | 7.59e-59 | 207 |
MS.gene43449.t1 | AT1G54270 | 34.877 | 367 | 207 | 5 | 309 | 671 | 53 | 391 | 1.23e-58 | 204 |
MS.gene43449.t1 | AT1G51380 | 31.865 | 386 | 237 | 4 | 277 | 661 | 9 | 369 | 1.82e-58 | 203 |
MS.gene43449.t1 | AT3G02065 | 33.333 | 369 | 225 | 4 | 318 | 683 | 1 | 351 | 6.69e-58 | 201 |
MS.gene43449.t1 | AT1G28180 | 76.068 | 117 | 28 | 0 | 318 | 434 | 1 | 117 | 2.86e-57 | 190 |
MS.gene43449.t1 | AT5G11170 | 33.594 | 384 | 215 | 7 | 297 | 670 | 53 | 406 | 3.60e-55 | 195 |
MS.gene43449.t1 | AT5G11200 | 33.594 | 384 | 215 | 7 | 297 | 670 | 53 | 406 | 3.60e-55 | 195 |
MS.gene43449.t1 | AT5G05450 | 34.190 | 389 | 207 | 12 | 293 | 657 | 19 | 382 | 6.12e-54 | 196 |
MS.gene43449.t1 | AT1G71370 | 32.391 | 389 | 227 | 10 | 288 | 663 | 14 | 379 | 1.02e-52 | 191 |
MS.gene43449.t1 | AT5G08620 | 31.951 | 410 | 239 | 11 | 297 | 690 | 87 | 472 | 2.87e-51 | 187 |
MS.gene43449.t1 | AT5G63630 | 32.915 | 398 | 233 | 9 | 297 | 680 | 255 | 632 | 5.90e-51 | 189 |
MS.gene43449.t1 | AT3G16840 | 30.612 | 441 | 255 | 10 | 291 | 681 | 191 | 630 | 8.82e-51 | 190 |
MS.gene43449.t1 | AT3G16840 | 30.612 | 441 | 255 | 10 | 291 | 681 | 192 | 631 | 1.00e-50 | 190 |
MS.gene43449.t1 | AT5G08610 | 31.000 | 400 | 240 | 9 | 297 | 681 | 389 | 767 | 1.14e-50 | 190 |
MS.gene43449.t1 | AT5G62190 | 33.750 | 400 | 235 | 7 | 296 | 685 | 102 | 481 | 2.00e-50 | 187 |
MS.gene43449.t1 | AT5G63630 | 32.915 | 398 | 233 | 9 | 297 | 680 | 61 | 438 | 4.26e-50 | 183 |
MS.gene43449.t1 | AT5G11170 | 33.523 | 352 | 194 | 7 | 329 | 670 | 2 | 323 | 2.19e-48 | 174 |
MS.gene43449.t1 | AT5G11200 | 30.353 | 425 | 215 | 8 | 297 | 670 | 53 | 447 | 2.53e-47 | 174 |
MS.gene43449.t1 | AT2G40700 | 27.706 | 462 | 259 | 11 | 293 | 685 | 37 | 492 | 7.69e-46 | 173 |
MS.gene43449.t1 | AT3G18600 | 31.880 | 367 | 221 | 6 | 297 | 657 | 96 | 439 | 8.95e-46 | 172 |
MS.gene43449.t1 | AT5G11200 | 32.000 | 425 | 226 | 13 | 297 | 670 | 53 | 465 | 1.11e-45 | 170 |
MS.gene43449.t1 | AT5G65900 | 30.390 | 385 | 242 | 7 | 290 | 669 | 154 | 517 | 7.84e-45 | 171 |
MS.gene43449.t1 | AT2G07750 | 29.630 | 405 | 249 | 11 | 294 | 683 | 379 | 762 | 9.06e-43 | 166 |
MS.gene43449.t1 | AT1G63250 | 30.073 | 409 | 242 | 11 | 294 | 683 | 332 | 715 | 1.25e-42 | 166 |
MS.gene43449.t1 | AT4G09730 | 28.788 | 396 | 259 | 7 | 274 | 661 | 99 | 479 | 8.81e-41 | 159 |
MS.gene43449.t1 | AT5G54910 | 28.502 | 414 | 259 | 11 | 289 | 689 | 70 | 459 | 3.52e-40 | 158 |
MS.gene43449.t1 | AT1G12770 | 27.765 | 443 | 264 | 11 | 281 | 678 | 98 | 529 | 7.12e-39 | 152 |
MS.gene43449.t1 | AT1G12770 | 27.765 | 443 | 264 | 11 | 281 | 678 | 98 | 529 | 7.12e-39 | 152 |
MS.gene43449.t1 | AT4G34910 | 28.713 | 404 | 223 | 8 | 290 | 647 | 46 | 430 | 3.21e-36 | 145 |
MS.gene43449.t1 | AT1G71280 | 29.714 | 350 | 184 | 10 | 288 | 625 | 15 | 314 | 3.50e-36 | 142 |
MS.gene43449.t1 | AT3G53110 | 30.952 | 378 | 220 | 12 | 297 | 657 | 98 | 451 | 4.48e-36 | 143 |
MS.gene43449.t1 | AT1G71280 | 29.805 | 359 | 188 | 11 | 288 | 634 | 15 | 321 | 5.61e-36 | 139 |
MS.gene43449.t1 | AT4G15850 | 27.064 | 436 | 260 | 9 | 297 | 681 | 38 | 466 | 5.70e-32 | 131 |
MS.gene43449.t1 | AT1G59990 | 26.141 | 482 | 261 | 17 | 291 | 685 | 81 | 554 | 4.16e-30 | 126 |
MS.gene43449.t1 | AT1G59990 | 26.141 | 482 | 261 | 17 | 291 | 685 | 81 | 554 | 5.29e-30 | 125 |
MS.gene43449.t1 | AT1G51380 | 28.028 | 289 | 182 | 5 | 277 | 564 | 9 | 272 | 5.32e-26 | 108 |
MS.gene43449.t1 | AT5G19210 | 25.510 | 392 | 246 | 10 | 279 | 646 | 65 | 434 | 5.63e-26 | 112 |
MS.gene43449.t1 | AT3G06980 | 23.604 | 394 | 255 | 11 | 290 | 657 | 374 | 747 | 3.78e-23 | 105 |
MS.gene43449.t1 | AT1G51380 | 28.099 | 242 | 149 | 4 | 277 | 518 | 9 | 225 | 6.42e-23 | 100 |
MS.gene43449.t1 | AT1G51380 | 28.099 | 242 | 149 | 4 | 277 | 518 | 9 | 225 | 7.70e-23 | 100 |
MS.gene43449.t1 | AT5G19210 | 26.016 | 246 | 150 | 7 | 419 | 646 | 46 | 277 | 1.55e-13 | 72.8 |
MS.gene43449.t1 | AT5G19210 | 26.016 | 246 | 150 | 7 | 419 | 646 | 46 | 277 | 1.55e-13 | 72.8 |
MS.gene43449.t1 | AT1G27880 | 24.138 | 377 | 231 | 15 | 309 | 671 | 266 | 601 | 4.27e-12 | 70.1 |
MS.gene43449.t1 | AT3G05740 | 23.177 | 384 | 233 | 13 | 309 | 672 | 118 | 459 | 7.41e-12 | 68.9 |
MS.gene43449.t1 | AT1G27880 | 24.138 | 377 | 231 | 15 | 309 | 671 | 266 | 601 | 8.68e-12 | 69.3 |
MS.gene43449.t1 | AT3G05740 | 23.611 | 360 | 216 | 12 | 309 | 648 | 203 | 523 | 1.06e-11 | 68.6 |
Find 208 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAGGGATTGGCGTATATTT+AGG | 0.151902 | 8.4:-548220 | MS.gene43449:CDS |
AGATTATAACATTTCTTATA+AGG | 0.211970 | 8.4:-548195 | MS.gene43449:CDS |
GGCGTTGCTGAGACCGGTTC+TGG | 0.212646 | 8.4:-548023 | MS.gene43449:CDS |
AATAGATCCTGGCTTGAATT+TGG | 0.231521 | 8.4:+546951 | None:intergenic |
AGATTAGTCTTGAAGGATTT+AGG | 0.252142 | 8.4:-547239 | MS.gene43449:CDS |
TTGATGAGAAGAGGATTTAT+AGG | 0.256546 | 8.4:-547572 | MS.gene43449:CDS |
GGTTAAATTTGCTCAGTATA+TGG | 0.266751 | 8.4:-547859 | MS.gene43449:CDS |
GGGATAACGGTGGCGGGGAC+GGG | 0.294516 | 8.4:+548989 | None:intergenic |
GGATAACGGTGGCGGGGACG+GGG | 0.297226 | 8.4:+548990 | None:intergenic |
AAGAAAATCAGCGCTCTTCT+TGG | 0.298072 | 8.4:+547332 | None:intergenic |
GCTTCATGCCTTGCCAATTC+AGG | 0.302855 | 8.4:+546976 | None:intergenic |
GCGGTCGGAATCGGAAGGTT+TGG | 0.311363 | 8.4:+548829 | None:intergenic |
GAGGGATTGGCGTATATTTA+GGG | 0.311480 | 8.4:-548219 | MS.gene43449:CDS |
CCTCATAGGCCTTGGAATCT+TGG | 0.328857 | 8.4:+548169 | None:intergenic |
TTTGGTGAGGAATACTGGTT+TGG | 0.330767 | 8.4:+548967 | None:intergenic |
ATTAAAGTTGTTTCCATTGT+TGG | 0.333853 | 8.4:-547834 | MS.gene43449:CDS |
GCTTCATTCTCCTCACTAAT+AGG | 0.335027 | 8.4:+547948 | None:intergenic |
CGGTCGGAATCGGAAGGTTT+GGG | 0.342546 | 8.4:+548830 | None:intergenic |
GAAACGACCCACTGATGAAT+TGG | 0.345298 | 8.4:-549014 | MS.gene43449:CDS |
TTGGTGAGGAATACTGGTTT+GGG | 0.347969 | 8.4:+548968 | None:intergenic |
GTTAAATTTGCTCAGTATAT+GGG | 0.349756 | 8.4:-547858 | MS.gene43449:CDS |
AGTTCCTCATCTTCATTCTC+TGG | 0.351472 | 8.4:+547594 | None:intergenic |
TGGAAAGGAGAAGTTCTTCT+TGG | 0.356268 | 8.4:+548882 | None:intergenic |
ACAGAGAACGAGAAAGAGAT+AGG | 0.359845 | 8.4:-548760 | MS.gene43449:CDS |
GATTATAACATTTCTTATAA+GGG | 0.361994 | 8.4:-548194 | MS.gene43449:CDS |
TGGGCTTTGGTGAGGAATAC+TGG | 0.364729 | 8.4:+548962 | None:intergenic |
GGGGATAACGGTGGCGGGGA+CGG | 0.368372 | 8.4:+548988 | None:intergenic |
GATAACGGTGGCGGGGACGG+GGG | 0.369325 | 8.4:+548991 | None:intergenic |
AAAGGAGCTTGAATCGATTA+AGG | 0.369624 | 8.4:-548615 | MS.gene43449:CDS |
GGGTCCTTATGCTGTTGTTA+TGG | 0.372233 | 8.4:-547922 | MS.gene43449:CDS |
GGCTGATCGTATGATTGATA+TGG | 0.372547 | 8.4:-547673 | MS.gene43449:CDS |
CTTATGATACGTTTGATATG+AGG | 0.372751 | 8.4:-548286 | MS.gene43449:CDS |
TTCATCAGTGGGTCGTTTCA+TGG | 0.379471 | 8.4:+549018 | None:intergenic |
GCGGTTGCTGTTGTTATTAG+TGG | 0.381704 | 8.4:+548862 | None:intergenic |
CCTCATCTCTTTCTCGTGCT+TGG | 0.383126 | 8.4:+548391 | None:intergenic |
ATATGAGGGTTGATCGTCAT+TGG | 0.389716 | 8.4:-548271 | MS.gene43449:CDS |
TGGTCGTTTGATTGATTGCT+TGG | 0.389906 | 8.4:-547745 | MS.gene43449:CDS |
CTTCAGCAGCGCGATGTTAT+CGG | 0.392814 | 8.4:-548044 | MS.gene43449:CDS |
CAGTCCTGTTCCACCTGAAT+TGG | 0.392949 | 8.4:-546989 | MS.gene43449:CDS |
CCTCAAGAAAATTCTCTAAT+GGG | 0.393770 | 8.4:+546891 | None:intergenic |
CTTGTTGCAACTGATGTTGC+TGG | 0.393795 | 8.4:-547198 | MS.gene43449:CDS |
TACAACATTCCTGACTCTTC+AGG | 0.394751 | 8.4:-547058 | MS.gene43449:CDS |
AAATGTACACCCATCGTATT+GGG | 0.397102 | 8.4:-547113 | MS.gene43449:CDS |
AGCTCGTGAACGTGCTCGAT+TGG | 0.410786 | 8.4:-548663 | MS.gene43449:CDS |
GTACCTATAGTCACGACAAC+AGG | 0.415743 | 8.4:+547480 | None:intergenic |
GGGGTTTGAGCCGCAGGTCA+TGG | 0.418088 | 8.4:-547652 | MS.gene43449:CDS |
CTTAAACCCTTGCTCCTCAA+TGG | 0.420410 | 8.4:+547803 | None:intergenic |
ACCCAACTCCTCATAGGCCT+TGG | 0.421483 | 8.4:+548161 | None:intergenic |
CCGCTGAGCATCAGCCTCCT+CGG | 0.422813 | 8.4:+548331 | None:intergenic |
AAGAGATGAGGGATCAGATT+AGG | 0.424114 | 8.4:-548379 | MS.gene43449:CDS |
GAAATGTACACCCATCGTAT+TGG | 0.424823 | 8.4:-547114 | MS.gene43449:CDS |
CGCTGAGCATCAGCCTCCTC+GGG | 0.425110 | 8.4:+548332 | None:intergenic |
CTTGCCAATTCAGGTGGAAC+AGG | 0.427377 | 8.4:+546985 | None:intergenic |
TTCTTGGTCGCGTTTGTGAC+CGG | 0.430604 | 8.4:+548898 | None:intergenic |
TCTGGTTTGAGATTACTAGA+AGG | 0.435140 | 8.4:+547612 | None:intergenic |
GAGTGCTTGTTGTTCACGTT+GGG | 0.436602 | 8.4:+548943 | None:intergenic |
AACAAGCACATTATATCTCT+TGG | 0.438220 | 8.4:+547215 | None:intergenic |
GAGGGATCAGATTAGGAAGA+AGG | 0.440776 | 8.4:-548372 | MS.gene43449:CDS |
TGATATGGGGTTTGAGCCGC+AGG | 0.441038 | 8.4:-547658 | MS.gene43449:CDS |
CGCAGCAGTCTTCCCAGAAC+CGG | 0.444110 | 8.4:+548010 | None:intergenic |
GTTATCAACTATGATATGCC+TGG | 0.451885 | 8.4:-547144 | MS.gene43449:CDS |
TTATAAGCTTCAGAGATTGT+TGG | 0.455794 | 8.4:-547394 | MS.gene43449:CDS |
AGGAAATGACCGAGAGGGAT+TGG | 0.456302 | 8.4:-548232 | MS.gene43449:CDS |
GCGTTGCTGAGACCGGTTCT+GGG | 0.458342 | 8.4:-548022 | MS.gene43449:CDS |
ACGATCGCGGCGGTCGGAAT+CGG | 0.459745 | 8.4:+548820 | None:intergenic |
CTATGTTGAGTTATATCACT+AGG | 0.463930 | 8.4:-547977 | MS.gene43449:CDS |
TTGTTGTTCACGTTGGGCTT+TGG | 0.464102 | 8.4:+548949 | None:intergenic |
GTTTGGGGATAACGGTGGCG+GGG | 0.469060 | 8.4:+548984 | None:intergenic |
TGGTTTGGGGATAACGGTGG+CGG | 0.470329 | 8.4:+548982 | None:intergenic |
TTCCAAGGCCTATGAGGAGT+TGG | 0.472890 | 8.4:-548163 | MS.gene43449:CDS |
CAGAGGGAGATTAGTCTTGA+AGG | 0.474519 | 8.4:-547246 | MS.gene43449:CDS |
ACGAGAAAGAGATAGGGAAA+GGG | 0.477539 | 8.4:-548753 | MS.gene43449:CDS |
CGAGTGCTTGTTGTTCACGT+TGG | 0.479724 | 8.4:+548942 | None:intergenic |
AACCCTGTTGTCGTGACTAT+AGG | 0.480050 | 8.4:-547483 | MS.gene43449:CDS |
GGGTTTGAGCCGCAGGTCAT+GGG | 0.480370 | 8.4:-547651 | MS.gene43449:CDS |
CTCTCAACCCAACTCCTCAT+AGG | 0.482587 | 8.4:+548155 | None:intergenic |
GCAAGGGTTTAAGATAAGAC+AGG | 0.485716 | 8.4:-547793 | MS.gene43449:CDS |
CCGAGGGTTTAGAGCTGGAA+TGG | 0.485919 | 8.4:-548441 | MS.gene43449:CDS |
CAGATGGCTGCTATTCCGCT+TGG | 0.486395 | 8.4:-548068 | MS.gene43449:CDS |
TGCTCAGCGGCGTAAGGAGG+AGG | 0.486502 | 8.4:-548318 | MS.gene43449:CDS |
TCCAAGGCCTATGAGGAGTT+GGG | 0.486930 | 8.4:-548162 | MS.gene43449:CDS |
GGCTTGCTAGAAAGTATTTG+AGG | 0.491288 | 8.4:-547506 | MS.gene43449:CDS |
GGCTGATGCTCAGCGGCGTA+AGG | 0.492621 | 8.4:-548324 | MS.gene43449:CDS |
GAAAATCGAAATTTCTCACT+AGG | 0.493364 | 8.4:+548548 | None:intergenic |
AACGAGAAAGAGATAGGGAA+AGG | 0.494581 | 8.4:-548754 | MS.gene43449:CDS |
CCAAGATTCCAAGGCCTATG+AGG | 0.495513 | 8.4:-548169 | MS.gene43449:CDS |
GCTGATCGTATGATTGATAT+GGG | 0.495582 | 8.4:-547672 | MS.gene43449:CDS |
GGTTTGGGGATAACGGTGGC+GGG | 0.496558 | 8.4:+548983 | None:intergenic |
TTGATAACATGAGCCACATC+AGG | 0.497781 | 8.4:+547159 | None:intergenic |
TTGAAGGCTGTGGAGAAGGC+AGG | 0.498092 | 8.4:-548113 | MS.gene43449:CDS |
ACCCATCGTATTGGGCGTAC+TGG | 0.502956 | 8.4:-547105 | MS.gene43449:CDS |
CGAGCTTGCTCAGCAGATTG+AGG | 0.503683 | 8.4:-547889 | MS.gene43449:CDS |
TTTGGCCGAGGGTTTAGAGC+TGG | 0.505228 | 8.4:-548446 | MS.gene43449:CDS |
TGCTGTTGTTATTAGTGGAA+AGG | 0.507369 | 8.4:+548867 | None:intergenic |
TGCTACCATGCCTCCTGCGG+TGG | 0.509902 | 8.4:-547532 | MS.gene43449:CDS |
GGAATAGCAGCCATCTGAAT+GGG | 0.513142 | 8.4:+548074 | None:intergenic |
CGGAATAGCAGCCATCTGAA+TGG | 0.513321 | 8.4:+548073 | None:intergenic |
ACTGGTCGTGCAGGAAAGAC+GGG | 0.515003 | 8.4:-547087 | MS.gene43449:CDS |
TATCGCGTGACCACTTTGCA+TGG | 0.515234 | 8.4:-547285 | MS.gene43449:CDS |
CATCAGTGTCCTGAAGAGTC+AGG | 0.517770 | 8.4:+547049 | None:intergenic |
GATAAAGAACATTCATATCA+CGG | 0.517997 | 8.4:+548495 | None:intergenic |
CCATGCCTCCTGCGGTGGAG+AGG | 0.521827 | 8.4:-547527 | MS.gene43449:CDS |
TACTGGTCGTGCAGGAAAGA+CGG | 0.523897 | 8.4:-547088 | MS.gene43449:CDS |
ATTTCGCCTAGGTGGTCTGT+CGG | 0.525141 | 8.4:+546927 | None:intergenic |
TAGGAAGAAGGATGGTGTGG+AGG | 0.525902 | 8.4:-548360 | MS.gene43449:CDS |
GCGTGACCACTTTGCATGGA+GGG | 0.527382 | 8.4:-547281 | MS.gene43449:CDS |
GTTATCGGCGTTGCTGAGAC+CGG | 0.527614 | 8.4:-548029 | MS.gene43449:CDS |
GAATACTGGTTTGGGGATAA+CGG | 0.527799 | 8.4:+548976 | None:intergenic |
ATAAAGAACATTCATATCAC+GGG | 0.530659 | 8.4:+548496 | None:intergenic |
GGTCTGTCGGGAATAGATCC+TGG | 0.531479 | 8.4:+546940 | None:intergenic |
ATGAGGAACTTGATGAGAAG+AGG | 0.531706 | 8.4:-547581 | MS.gene43449:CDS |
GGTGCCATAACAACAGCATA+AGG | 0.532681 | 8.4:+547918 | None:intergenic |
GCTAAGAATTTGGACAAGGA+AGG | 0.533137 | 8.4:-547309 | MS.gene43449:CDS |
TTTCGCCTAGGTGGTCTGTC+GGG | 0.533463 | 8.4:+546928 | None:intergenic |
GCAACTGATGTTGCTGGACG+TGG | 0.534104 | 8.4:-547192 | MS.gene43449:CDS |
CATCTCTTTCTCGTGCTTGG+CGG | 0.534514 | 8.4:+548394 | None:intergenic |
CTTTCATCATGATCACATGC+TGG | 0.534873 | 8.4:+547430 | None:intergenic |
TGCGGAACGAGAACGTGAAA+AGG | 0.537366 | 8.4:-548633 | MS.gene43449:CDS |
ATTGGGCGTACTGGTCGTGC+AGG | 0.537891 | 8.4:-547096 | MS.gene43449:CDS |
CTAGCAAGCCTCTCCACCGC+AGG | 0.541300 | 8.4:+547519 | None:intergenic |
TGCTGAGCAAGCTCGCGAGT+CGG | 0.542852 | 8.4:+547897 | None:intergenic |
CAGCCATCTGAATGGGAGAA+GGG | 0.544407 | 8.4:+548081 | None:intergenic |
TTAAATTTGCTCAGTATATG+GGG | 0.545312 | 8.4:-547857 | MS.gene43449:CDS |
CGGCAAGCTTCTTCTGCTCA+CGG | 0.545361 | 8.4:+548414 | None:intergenic |
AATGGACTGACCACCAACAA+TGG | 0.547761 | 8.4:+547821 | None:intergenic |
TGTTGGTGGTCAGTCCATTG+AGG | 0.549272 | 8.4:-547817 | MS.gene43449:CDS |
GTCGTGACTATAGGTACTGC+TGG | 0.550829 | 8.4:-547474 | MS.gene43449:CDS |
CCTCTCCACCGCAGGAGGCA+TGG | 0.551441 | 8.4:+547527 | None:intergenic |
GTCAGTCCATTGAGGAGCAA+GGG | 0.551504 | 8.4:-547809 | MS.gene43449:CDS |
TTATGATACGTTTGATATGA+GGG | 0.551866 | 8.4:-548285 | MS.gene43449:CDS |
CAGAGAACGAGAAAGAGATA+GGG | 0.554136 | 8.4:-548759 | MS.gene43449:CDS |
GATCAGATTAGGAAGAAGGA+TGG | 0.554146 | 8.4:-548368 | MS.gene43449:CDS |
AAAGTTGTTTCCATTGTTGG+TGG | 0.555528 | 8.4:-547831 | MS.gene43449:CDS |
GTGTACATTTCAATATTCCC+AGG | 0.556474 | 8.4:+547126 | None:intergenic |
GCAAGCCTCTCCACCGCAGG+AGG | 0.558194 | 8.4:+547522 | None:intergenic |
ACGGTCACGATCGCGGCGGT+CGG | 0.560584 | 8.4:+548814 | None:intergenic |
TTATCAACTATGATATGCCT+GGG | 0.566309 | 8.4:-547143 | MS.gene43449:CDS |
GAAATTGTGATTGCGACTCC+TGG | 0.569519 | 8.4:-547765 | MS.gene43449:CDS |
CGCCGCCACAATCAAGTCGC+CGG | 0.570411 | 8.4:-548917 | MS.gene43449:CDS |
ATAAGGGTTCCAAGATTCCA+AGG | 0.571931 | 8.4:-548178 | MS.gene43449:CDS |
ATCGGAAGGTTTGGGATCGG+AGG | 0.574487 | 8.4:+548838 | None:intergenic |
ACCAGTACGCCCAATACGAT+GGG | 0.574501 | 8.4:+547104 | None:intergenic |
GCCGCAGGTCATGGGTGTGT+TGG | 0.578251 | 8.4:-547643 | MS.gene43449:CDS |
GCAGCCATCTGAATGGGAGA+AGG | 0.578307 | 8.4:+548080 | None:intergenic |
TCATGCCTTGCCAATTCAGG+TGG | 0.578546 | 8.4:+546979 | None:intergenic |
AAATATACGCCAATCCCTCT+CGG | 0.583923 | 8.4:+548223 | None:intergenic |
GAAGCTTCCAAATTCAAGCC+AGG | 0.584125 | 8.4:-546958 | MS.gene43449:CDS |
GAGGGAAATCACAGGATCAG+AGG | 0.584484 | 8.4:-547263 | MS.gene43449:CDS |
AAGGTTTGGGATCGGAGGAG+CGG | 0.584503 | 8.4:+548843 | None:intergenic |
GGTCAGTCCATTGAGGAGCA+AGG | 0.586693 | 8.4:-547810 | MS.gene43449:CDS |
AACTGTCTCGATCGTGACCA+CGG | 0.588393 | 8.4:+548789 | None:intergenic |
CACGGTCACGGTCACGATCG+CGG | 0.590545 | 8.4:+548807 | None:intergenic |
GACCAGTACGCCCAATACGA+TGG | 0.591341 | 8.4:+547103 | None:intergenic |
AACCCCTTCTCCCATTCAGA+TGG | 0.591572 | 8.4:-548084 | MS.gene43449:CDS |
TGTGACCGGCGACTTGATTG+TGG | 0.592023 | 8.4:+548912 | None:intergenic |
TCGTGCAGGAAAGACGGGTG+TGG | 0.592030 | 8.4:-547082 | MS.gene43449:CDS |
GATTAGGAAGAAGGATGGTG+TGG | 0.593928 | 8.4:-548363 | MS.gene43449:CDS |
TCATTCTCCTCACTAATAGG+AGG | 0.596345 | 8.4:+547951 | None:intergenic |
CTCGATCGTGACCACGGTCA+CGG | 0.597771 | 8.4:+548795 | None:intergenic |
TGATGCTCAGCGGCGTAAGG+AGG | 0.601003 | 8.4:-548321 | MS.gene43449:CDS |
AAAAGAAGCTGAGCTTCATG+AGG | 0.602412 | 8.4:+548467 | None:intergenic |
CTAGTGATATAACTCAACAT+AGG | 0.604406 | 8.4:+547978 | None:intergenic |
CCATTCCAGCTCTAAACCCT+CGG | 0.605302 | 8.4:+548441 | None:intergenic |
CTGTTCCACCTGAATTGGCA+AGG | 0.607946 | 8.4:-546984 | MS.gene43449:CDS |
TGGTGAGGAATACTGGTTTG+GGG | 0.607986 | 8.4:+548969 | None:intergenic |
TAATTATGTTGTTCTTGATG+AGG | 0.610318 | 8.4:-547694 | MS.gene43449:CDS |
CAAGGGTTTAAGATAAGACA+GGG | 0.610952 | 8.4:-547792 | MS.gene43449:CDS |
AGGGAAATCACAGGATCAGA+GGG | 0.612491 | 8.4:-547262 | MS.gene43449:CDS |
TCGCGGCGGTCGGAATCGGA+AGG | 0.612857 | 8.4:+548824 | None:intergenic |
CAAGCACGAGAAAGAGATGA+GGG | 0.613888 | 8.4:-548390 | MS.gene43449:CDS |
CGCGTGACCACTTTGCATGG+AGG | 0.615726 | 8.4:-547282 | MS.gene43449:CDS |
CGCGATCGTGACCGTGACCG+TGG | 0.617023 | 8.4:-548806 | MS.gene43449:CDS |
TAGTGAGGAGAATGAAGCTG+AGG | 0.619427 | 8.4:-547943 | MS.gene43449:CDS |
TTGCTTGGAGCGTCGCTATG+CGG | 0.622750 | 8.4:-547730 | MS.gene43449:CDS |
TGGTGTGGAGGAGAAGCCCG+AGG | 0.624682 | 8.4:-548348 | MS.gene43449:CDS |
TCCAACACACCCATGACCTG+CGG | 0.624778 | 8.4:+547642 | None:intergenic |
AAAGAAGCTGAGCTTCATGA+GGG | 0.625643 | 8.4:+548468 | None:intergenic |
AAAACAGTGTCATTTCGCCT+AGG | 0.628001 | 8.4:+546916 | None:intergenic |
CCAAGCACGAGAAAGAGATG+AGG | 0.628079 | 8.4:-548391 | MS.gene43449:CDS |
CAAACCAGAGAATGAAGATG+AGG | 0.629792 | 8.4:-547598 | MS.gene43449:CDS |
TGATTTCCCTCCATGCAAAG+TGG | 0.631438 | 8.4:+547275 | None:intergenic |
TTTGCATGGAGGGAAATCAC+AGG | 0.635122 | 8.4:-547271 | MS.gene43449:CDS |
AGTGAGGAGAATGAAGCTGA+GGG | 0.635359 | 8.4:-547942 | MS.gene43449:CDS |
AAGCAATCAATCAAACGACC+AGG | 0.636109 | 8.4:+547747 | None:intergenic |
AGCCATCTGAATGGGAGAAG+GGG | 0.636200 | 8.4:+548082 | None:intergenic |
CAGTGCTACCATGCCTCCTG+CGG | 0.636466 | 8.4:-547535 | MS.gene43449:CDS |
TGCTCGATTGGAGAAGCTTG+CGG | 0.638934 | 8.4:-548651 | MS.gene43449:CDS |
TCAGCAGATTGAGGATGAGA+CGG | 0.638997 | 8.4:-547880 | MS.gene43449:CDS |
TCGATTAAGGAACAATACCT+AGG | 0.640164 | 8.4:-548602 | MS.gene43449:CDS |
ACAGTGTCATTTCGCCTAGG+TGG | 0.641491 | 8.4:+546919 | None:intergenic |
TCTTGCTAAGAATTTGGACA+AGG | 0.643179 | 8.4:-547313 | MS.gene43449:CDS |
GTTCACGTTGGGCTTTGGTG+AGG | 0.643761 | 8.4:+548954 | None:intergenic |
TTGGAGTGAGAAGAAGCTTG+AGG | 0.645359 | 8.4:-548252 | MS.gene43449:CDS |
GCTTGAGGAAATGACCGAGA+GGG | 0.646556 | 8.4:-548237 | MS.gene43449:CDS |
TGGTATTGACATTCCTGATG+TGG | 0.647427 | 8.4:-547172 | MS.gene43449:CDS |
TACCTATAGTCACGACAACA+GGG | 0.648496 | 8.4:+547481 | None:intergenic |
CTTCTTCACGTTCTTTATCG+CGG | 0.650719 | 8.4:+548693 | None:intergenic |
GGAATCGGAAGGTTTGGGAT+CGG | 0.661284 | 8.4:+548835 | None:intergenic |
CCGAGGAGGCTGATGCTCAG+CGG | 0.665561 | 8.4:-548331 | MS.gene43449:CDS |
TAGGCTTCCTCCTATTAGTG+AGG | 0.666705 | 8.4:-547958 | MS.gene43449:CDS |
CTGATCGTATGATTGATATG+GGG | 0.672880 | 8.4:-547671 | MS.gene43449:CDS |
TACTGGTTTGGGGATAACGG+TGG | 0.679567 | 8.4:+548979 | None:intergenic |
TCGCGCTGCTGAAGTCCAAG+CGG | 0.697186 | 8.4:+548053 | None:intergenic |
CTATTCCCGACAGACCACCT+AGG | 0.700511 | 8.4:-546933 | MS.gene43449:CDS |
AGCTTGAGGAAATGACCGAG+AGG | 0.702757 | 8.4:-548238 | MS.gene43449:CDS |
TGTGGAGGAGAAGCCCGAGG+AGG | 0.708475 | 8.4:-548345 | MS.gene43449:CDS |
GACCGGCGACTTGATTGTGG+CGG | 0.719948 | 8.4:+548915 | None:intergenic |
GGTCACGGTCACGATCGCGG+CGG | 0.799686 | 8.4:+548810 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATTATAACATTTCTTATA+AGG | - | chr8.4:547727-547746 | MS.gene43449:CDS | 15.0% |
!! | GATTATAACATTTCTTATAA+GGG | - | chr8.4:547728-547747 | MS.gene43449:CDS | 15.0% |
!! | TTCAAAAAAACCTAAAAAAA+GGG | - | chr8.4:547343-547362 | MS.gene43449:CDS | 15.0% |
!! | GTTCAAAAAAACCTAAAAAA+AGG | - | chr8.4:547342-547361 | MS.gene43449:CDS | 20.0% |
! | ATAAAGAACATTCATATCAC+GGG | + | chr8.4:547429-547448 | None:intergenic | 25.0% |
! | GATAAAGAACATTCATATCA+CGG | + | chr8.4:547430-547449 | None:intergenic | 25.0% |
! | TAATTATGTTGTTCTTGATG+AGG | - | chr8.4:548228-548247 | MS.gene43449:CDS | 25.0% |
! | TTATGATACGTTTGATATGA+GGG | - | chr8.4:547637-547656 | MS.gene43449:CDS | 25.0% |
!! | AATTTCGATTTTCCTTTGAT+TGG | - | chr8.4:547384-547403 | MS.gene43449:CDS | 25.0% |
!! | ATTAAAGTTGTTTCCATTGT+TGG | - | chr8.4:548088-548107 | MS.gene43449:CDS | 25.0% |
!! | ATTTCGATTTTCCTTTGATT+GGG | - | chr8.4:547385-547404 | MS.gene43449:CDS | 25.0% |
!! | GTTAAATTTGCTCAGTATAT+GGG | - | chr8.4:548064-548083 | MS.gene43449:CDS | 25.0% |
!! | TGATTTTCTTGCTAAGAATT+TGG | - | chr8.4:548603-548622 | MS.gene43449:CDS | 25.0% |
!! | TTAAATTTGCTCAGTATATG+GGG | - | chr8.4:548065-548084 | MS.gene43449:CDS | 25.0% |
!!! | GGTTTAATAACCCTTTTTTT+AGG | + | chr8.4:547356-547375 | None:intergenic | 25.0% |
!!! | TTTTAGGTTTTTTTGAACCT+AGG | + | chr8.4:547340-547359 | None:intergenic | 25.0% |
AACAAGCACATTATATCTCT+TGG | + | chr8.4:548710-548729 | None:intergenic | 30.0% | |
CTAGTGATATAACTCAACAT+AGG | + | chr8.4:547947-547966 | None:intergenic | 30.0% | |
CTATGTTGAGTTATATCACT+AGG | - | chr8.4:547945-547964 | MS.gene43449:CDS | 30.0% | |
CTTATGATACGTTTGATATG+AGG | - | chr8.4:547636-547655 | MS.gene43449:CDS | 30.0% | |
GAAAATCGAAATTTCTCACT+AGG | + | chr8.4:547377-547396 | None:intergenic | 30.0% | |
TTATAAGCTTCAGAGATTGT+TGG | - | chr8.4:548528-548547 | MS.gene43449:CDS | 30.0% | |
TTATCAACTATGATATGCCT+GGG | - | chr8.4:548779-548798 | MS.gene43449:CDS | 30.0% | |
TTGATGAGAAGAGGATTTAT+AGG | - | chr8.4:548350-548369 | MS.gene43449:CDS | 30.0% | |
! | GGTTAAATTTGCTCAGTATA+TGG | - | chr8.4:548063-548082 | MS.gene43449:CDS | 30.0% |
! | TTCAGTATTTTCCCAATCAA+AGG | + | chr8.4:547399-547418 | None:intergenic | 30.0% |
!! | AGATTAGTCTTGAAGGATTT+AGG | - | chr8.4:548683-548702 | MS.gene43449:CDS | 30.0% |
AAAGGAGCTTGAATCGATTA+AGG | - | chr8.4:547307-547326 | MS.gene43449:CDS | 35.0% | |
AAATGTACACCCATCGTATT+GGG | - | chr8.4:548809-548828 | MS.gene43449:CDS | 35.0% | |
CTGATCGTATGATTGATATG+GGG | - | chr8.4:548251-548270 | MS.gene43449:CDS | 35.0% | |
GCTGATCGTATGATTGATAT+GGG | - | chr8.4:548250-548269 | MS.gene43449:CDS | 35.0% | |
GTGTACATTTCAATATTCCC+AGG | + | chr8.4:548799-548818 | None:intergenic | 35.0% | |
GTTATCAACTATGATATGCC+TGG | - | chr8.4:548778-548797 | MS.gene43449:CDS | 35.0% | |
TCGATTAAGGAACAATACCT+AGG | - | chr8.4:547320-547339 | MS.gene43449:CDS | 35.0% | |
TCTTGCTAAGAATTTGGACA+AGG | - | chr8.4:548609-548628 | MS.gene43449:CDS | 35.0% | |
! | AAAGTTGTTTCCATTGTTGG+TGG | - | chr8.4:548091-548110 | MS.gene43449:CDS | 35.0% |
! | AATAGATCCTGGCTTGAATT+TGG | + | chr8.4:548974-548993 | None:intergenic | 35.0% |
! | CAAGGGTTTAAGATAAGACA+GGG | - | chr8.4:548130-548149 | MS.gene43449:CDS | 35.0% |
! | TCTGGTTTGAGATTACTAGA+AGG | + | chr8.4:548313-548332 | None:intergenic | 35.0% |
! | TGCTGTTGTTATTAGTGGAA+AGG | + | chr8.4:547058-547077 | None:intergenic | 35.0% |
AAAAGAAGCTGAGCTTCATG+AGG | + | chr8.4:547458-547477 | None:intergenic | 40.0% | |
AAAGAAGCTGAGCTTCATGA+GGG | + | chr8.4:547457-547476 | None:intergenic | 40.0% | |
AAATATACGCCAATCCCTCT+CGG | + | chr8.4:547702-547721 | None:intergenic | 40.0% | |
AACGAGAAAGAGATAGGGAA+AGG | - | chr8.4:547168-547187 | MS.gene43449:CDS | 40.0% | |
AAGAAAATCAGCGCTCTTCT+TGG | + | chr8.4:548593-548612 | None:intergenic | 40.0% | |
AAGAGATGAGGGATCAGATT+AGG | - | chr8.4:547543-547562 | MS.gene43449:CDS | 40.0% | |
AAGCAATCAATCAAACGACC+AGG | + | chr8.4:548178-548197 | None:intergenic | 40.0% | |
ACAGAGAACGAGAAAGAGAT+AGG | - | chr8.4:547162-547181 | MS.gene43449:CDS | 40.0% | |
ACGAGAAAGAGATAGGGAAA+GGG | - | chr8.4:547169-547188 | MS.gene43449:CDS | 40.0% | |
AGTTCCTCATCTTCATTCTC+TGG | + | chr8.4:548331-548350 | None:intergenic | 40.0% | |
ATAAGGGTTCCAAGATTCCA+AGG | - | chr8.4:547744-547763 | MS.gene43449:CDS | 40.0% | |
ATGAGGAACTTGATGAGAAG+AGG | - | chr8.4:548341-548360 | MS.gene43449:CDS | 40.0% | |
CAAACCAGAGAATGAAGATG+AGG | - | chr8.4:548324-548343 | MS.gene43449:CDS | 40.0% | |
CAGAGAACGAGAAAGAGATA+GGG | - | chr8.4:547163-547182 | MS.gene43449:CDS | 40.0% | |
CTTCTTCACGTTCTTTATCG+CGG | + | chr8.4:547232-547251 | None:intergenic | 40.0% | |
CTTTCATCATGATCACATGC+TGG | + | chr8.4:548495-548514 | None:intergenic | 40.0% | |
GAAATGTACACCCATCGTAT+TGG | - | chr8.4:548808-548827 | MS.gene43449:CDS | 40.0% | |
GATCAGATTAGGAAGAAGGA+TGG | - | chr8.4:547554-547573 | MS.gene43449:CDS | 40.0% | |
GCTAAGAATTTGGACAAGGA+AGG | - | chr8.4:548613-548632 | MS.gene43449:CDS | 40.0% | |
GCTTCATTCTCCTCACTAAT+AGG | + | chr8.4:547977-547996 | None:intergenic | 40.0% | |
GGCTGATCGTATGATTGATA+TGG | - | chr8.4:548249-548268 | MS.gene43449:CDS | 40.0% | |
TACAACATTCCTGACTCTTC+AGG | - | chr8.4:548864-548883 | MS.gene43449:CDS | 40.0% | |
TACCTATAGTCACGACAACA+GGG | + | chr8.4:548444-548463 | None:intergenic | 40.0% | |
TCATTCTCCTCACTAATAGG+AGG | + | chr8.4:547974-547993 | None:intergenic | 40.0% | |
TGGAAAGGAGAAGTTCTTCT+TGG | + | chr8.4:547043-547062 | None:intergenic | 40.0% | |
TGGTCGTTTGATTGATTGCT+TGG | - | chr8.4:548177-548196 | MS.gene43449:CDS | 40.0% | |
! | AGAGGGATTGGCGTATATTT+AGG | - | chr8.4:547702-547721 | MS.gene43449:CDS | 40.0% |
! | ATATGAGGGTTGATCGTCAT+TGG | - | chr8.4:547651-547670 | MS.gene43449:CDS | 40.0% |
! | CATGAAGCTCAGCTTCTTTT+TGG | - | chr8.4:547458-547477 | MS.gene43449:CDS | 40.0% |
! | GAGGGATTGGCGTATATTTA+GGG | - | chr8.4:547703-547722 | MS.gene43449:CDS | 40.0% |
! | GCAAGGGTTTAAGATAAGAC+AGG | - | chr8.4:548129-548148 | MS.gene43449:CDS | 40.0% |
! | GTTGAGTCAAGAGCTTTTGA+AGG | - | chr8.4:547793-547812 | MS.gene43449:CDS | 40.0% |
! | TTGATAACATGAGCCACATC+AGG | + | chr8.4:548766-548785 | None:intergenic | 40.0% |
! | TTTGGTGAGGAATACTGGTT+TGG | + | chr8.4:546958-546977 | None:intergenic | 40.0% |
!! | AAAACAGTGTCATTTCGCCT+AGG | + | chr8.4:549009-549028 | None:intergenic | 40.0% |
!! | GAATACTGGTTTGGGGATAA+CGG | + | chr8.4:546949-546968 | None:intergenic | 40.0% |
!! | GGCTTGCTAGAAAGTATTTG+AGG | - | chr8.4:548416-548435 | MS.gene43449:CDS | 40.0% |
!! | TGGTATTGACATTCCTGATG+TGG | - | chr8.4:548750-548769 | MS.gene43449:CDS | 40.0% |
!! | TTGGTGAGGAATACTGGTTT+GGG | + | chr8.4:546957-546976 | None:intergenic | 40.0% |
AACCCTGTTGTCGTGACTAT+AGG | - | chr8.4:548439-548458 | MS.gene43449:CDS | 45.0% | |
AGGGAAATCACAGGATCAGA+GGG | - | chr8.4:548660-548679 | MS.gene43449:CDS | 45.0% | |
AGTGAGGAGAATGAAGCTGA+GGG | - | chr8.4:547980-547999 | MS.gene43449:CDS | 45.0% | |
CAAGCACGAGAAAGAGATGA+GGG | - | chr8.4:547532-547551 | MS.gene43449:CDS | 45.0% | |
CTTAAACCCTTGCTCCTCAA+TGG | + | chr8.4:548122-548141 | None:intergenic | 45.0% | |
CTTGTTGCAACTGATGTTGC+TGG | - | chr8.4:548724-548743 | MS.gene43449:CDS | 45.0% | |
GAAACGACCCACTGATGAAT+TGG | - | chr8.4:546908-546927 | MS.gene43449:CDS | 45.0% | |
GAAATTGTGATTGCGACTCC+TGG | - | chr8.4:548157-548176 | MS.gene43449:CDS | 45.0% | |
GAAGCTTCCAAATTCAAGCC+AGG | - | chr8.4:548964-548983 | MS.gene43449:CDS | 45.0% | |
GAGGGATCAGATTAGGAAGA+AGG | - | chr8.4:547550-547569 | MS.gene43449:CDS | 45.0% | |
GATTAGGAAGAAGGATGGTG+TGG | - | chr8.4:547559-547578 | MS.gene43449:CDS | 45.0% | |
GGAATAGCAGCCATCTGAAT+GGG | + | chr8.4:547851-547870 | None:intergenic | 45.0% | |
GGGTCCTTATGCTGTTGTTA+TGG | - | chr8.4:548000-548019 | MS.gene43449:CDS | 45.0% | |
GTACCTATAGTCACGACAAC+AGG | + | chr8.4:548445-548464 | None:intergenic | 45.0% | |
TAGGCTTCCTCCTATTAGTG+AGG | - | chr8.4:547964-547983 | MS.gene43449:CDS | 45.0% | |
TAGTGAGGAGAATGAAGCTG+AGG | - | chr8.4:547979-547998 | MS.gene43449:CDS | 45.0% | |
TCAGCAGATTGAGGATGAGA+CGG | - | chr8.4:548042-548061 | MS.gene43449:CDS | 45.0% | |
TGATTTCCCTCCATGCAAAG+TGG | + | chr8.4:548650-548669 | None:intergenic | 45.0% | |
TTGGAGTGAGAAGAAGCTTG+AGG | - | chr8.4:547670-547689 | MS.gene43449:CDS | 45.0% | |
TTTGCATGGAGGGAAATCAC+AGG | - | chr8.4:548651-548670 | MS.gene43449:CDS | 45.0% | |
! | GCGGTTGCTGTTGTTATTAG+TGG | + | chr8.4:547063-547082 | None:intergenic | 45.0% |
! | GGTGCCATAACAACAGCATA+AGG | + | chr8.4:548007-548026 | None:intergenic | 45.0% |
! | TTGTTGTTCACGTTGGGCTT+TGG | + | chr8.4:546976-546995 | None:intergenic | 45.0% |
!! | AATGGACTGACCACCAACAA+TGG | + | chr8.4:548104-548123 | None:intergenic | 45.0% |
!! | CAGAGGGAGATTAGTCTTGA+AGG | - | chr8.4:548676-548695 | MS.gene43449:CDS | 45.0% |
!! | GAGTGCTTGTTGTTCACGTT+GGG | + | chr8.4:546982-547001 | None:intergenic | 45.0% |
!! | TCAAGAGCTTTTGAAGGCTG+TGG | - | chr8.4:547799-547818 | MS.gene43449:CDS | 45.0% |
!! | TGGTGAGGAATACTGGTTTG+GGG | + | chr8.4:546956-546975 | None:intergenic | 45.0% |
AACCCCTTCTCCCATTCAGA+TGG | - | chr8.4:547838-547857 | MS.gene43449:CDS | 50.0% | |
AACTGTCTCGATCGTGACCA+CGG | + | chr8.4:547136-547155 | None:intergenic | 50.0% | |
ACCAGTACGCCCAATACGAT+GGG | + | chr8.4:548821-548840 | None:intergenic | 50.0% | |
AGCCATCTGAATGGGAGAAG+GGG | + | chr8.4:547843-547862 | None:intergenic | 50.0% | |
AGCTTGAGGAAATGACCGAG+AGG | - | chr8.4:547684-547703 | MS.gene43449:CDS | 50.0% | |
AGGAAATGACCGAGAGGGAT+TGG | - | chr8.4:547690-547709 | MS.gene43449:CDS | 50.0% | |
ATTTCGCCTAGGTGGTCTGT+CGG | + | chr8.4:548998-549017 | None:intergenic | 50.0% | |
CAGCCATCTGAATGGGAGAA+GGG | + | chr8.4:547844-547863 | None:intergenic | 50.0% | |
CAGTCCTGTTCCACCTGAAT+TGG | - | chr8.4:548933-548952 | MS.gene43449:CDS | 50.0% | |
CATCAGTGTCCTGAAGAGTC+AGG | + | chr8.4:548876-548895 | None:intergenic | 50.0% | |
CATCTCTTTCTCGTGCTTGG+CGG | + | chr8.4:547531-547550 | None:intergenic | 50.0% | |
CCAAGATTCCAAGGCCTATG+AGG | - | chr8.4:547753-547772 | MS.gene43449:CDS | 50.0% | |
CCAAGCACGAGAAAGAGATG+AGG | - | chr8.4:547531-547550 | MS.gene43449:CDS | 50.0% | |
CCTCATAGGCCTTGGAATCT+TGG | + | chr8.4:547756-547775 | None:intergenic | 50.0% | |
CCTCATCTCTTTCTCGTGCT+TGG | + | chr8.4:547534-547553 | None:intergenic | 50.0% | |
CGGAATAGCAGCCATCTGAA+TGG | + | chr8.4:547852-547871 | None:intergenic | 50.0% | |
CTCTCAACCCAACTCCTCAT+AGG | + | chr8.4:547770-547789 | None:intergenic | 50.0% | |
CTGTTCCACCTGAATTGGCA+AGG | - | chr8.4:548938-548957 | MS.gene43449:CDS | 50.0% | |
CTTCAGCAGCGCGATGTTAT+CGG | - | chr8.4:547878-547897 | MS.gene43449:CDS | 50.0% | |
CTTGCCAATTCAGGTGGAAC+AGG | + | chr8.4:548940-548959 | None:intergenic | 50.0% | |
GAGGGAAATCACAGGATCAG+AGG | - | chr8.4:548659-548678 | MS.gene43449:CDS | 50.0% | |
GCTTCATGCCTTGCCAATTC+AGG | + | chr8.4:548949-548968 | None:intergenic | 50.0% | |
GCTTGAGGAAATGACCGAGA+GGG | - | chr8.4:547685-547704 | MS.gene43449:CDS | 50.0% | |
GTCAGTCCATTGAGGAGCAA+GGG | - | chr8.4:548113-548132 | MS.gene43449:CDS | 50.0% | |
TACTGGTCGTGCAGGAAAGA+CGG | - | chr8.4:548834-548853 | MS.gene43449:CDS | 50.0% | |
TAGGAAGAAGGATGGTGTGG+AGG | - | chr8.4:547562-547581 | MS.gene43449:CDS | 50.0% | |
TATCGCGTGACCACTTTGCA+TGG | - | chr8.4:548637-548656 | MS.gene43449:CDS | 50.0% | |
TCATGCCTTGCCAATTCAGG+TGG | + | chr8.4:548946-548965 | None:intergenic | 50.0% | |
TCCAAGGCCTATGAGGAGTT+GGG | - | chr8.4:547760-547779 | MS.gene43449:CDS | 50.0% | |
TGCGGAACGAGAACGTGAAA+AGG | - | chr8.4:547289-547308 | MS.gene43449:CDS | 50.0% | |
TGCTCGATTGGAGAAGCTTG+CGG | - | chr8.4:547271-547290 | MS.gene43449:CDS | 50.0% | |
TTCCAAGGCCTATGAGGAGT+TGG | - | chr8.4:547759-547778 | MS.gene43449:CDS | 50.0% | |
TTCTTGGTCGCGTTTGTGAC+CGG | + | chr8.4:547027-547046 | None:intergenic | 50.0% | |
! | GGAATCGGAAGGTTTGGGAT+CGG | + | chr8.4:547090-547109 | None:intergenic | 50.0% |
! | GTCGTGACTATAGGTACTGC+TGG | - | chr8.4:548448-548467 | MS.gene43449:CDS | 50.0% |
! | TGGGCTTTGGTGAGGAATAC+TGG | + | chr8.4:546963-546982 | None:intergenic | 50.0% |
!! | ACAGTGTCATTTCGCCTAGG+TGG | + | chr8.4:549006-549025 | None:intergenic | 50.0% |
!! | CCATTCCAGCTCTAAACCCT+CGG | + | chr8.4:547484-547503 | None:intergenic | 50.0% |
!! | CGAGTGCTTGTTGTTCACGT+TGG | + | chr8.4:546983-547002 | None:intergenic | 50.0% |
!! | CTCAGCTTCTTTTTGGCCGA+GGG | - | chr8.4:547465-547484 | MS.gene43449:CDS | 50.0% |
!! | GCTTTTGAAGGCTGTGGAGA+AGG | - | chr8.4:547805-547824 | MS.gene43449:CDS | 50.0% |
!! | TACTGGTTTGGGGATAACGG+TGG | + | chr8.4:546946-546965 | None:intergenic | 50.0% |
!! | TGTTGGTGGTCAGTCCATTG+AGG | - | chr8.4:548105-548124 | MS.gene43449:CDS | 50.0% |
ACCCAACTCCTCATAGGCCT+TGG | + | chr8.4:547764-547783 | None:intergenic | 55.0% | |
ACCCATCGTATTGGGCGTAC+TGG | - | chr8.4:548817-548836 | MS.gene43449:CDS | 55.0% | |
ACGGGGGCCAATTCATCAGT+GGG | + | chr8.4:546918-546937 | None:intergenic | 55.0% | |
ACTGGTCGTGCAGGAAAGAC+GGG | - | chr8.4:548835-548854 | MS.gene43449:CDS | 55.0% | |
AGCTCGTGAACGTGCTCGAT+TGG | - | chr8.4:547259-547278 | MS.gene43449:CDS | 55.0% | |
CAGATGGCTGCTATTCCGCT+TGG | - | chr8.4:547854-547873 | MS.gene43449:CDS | 55.0% | |
CGGCAAGCTTCTTCTGCTCA+CGG | + | chr8.4:547511-547530 | None:intergenic | 55.0% | |
CGGTCGGAATCGGAAGGTTT+GGG | + | chr8.4:547095-547114 | None:intergenic | 55.0% | |
CTATTCCCGACAGACCACCT+AGG | - | chr8.4:548989-549008 | MS.gene43449:CDS | 55.0% | |
GACCAGTACGCCCAATACGA+TGG | + | chr8.4:548822-548841 | None:intergenic | 55.0% | |
GCAACTGATGTTGCTGGACG+TGG | - | chr8.4:548730-548749 | MS.gene43449:CDS | 55.0% | |
GCAGCCATCTGAATGGGAGA+AGG | + | chr8.4:547845-547864 | None:intergenic | 55.0% | |
GCGTGACCACTTTGCATGGA+GGG | - | chr8.4:548641-548660 | MS.gene43449:CDS | 55.0% | |
GGTCAGTCCATTGAGGAGCA+AGG | - | chr8.4:548112-548131 | MS.gene43449:CDS | 55.0% | |
GGTCTGTCGGGAATAGATCC+TGG | + | chr8.4:548985-549004 | None:intergenic | 55.0% | |
GTTATCGGCGTTGCTGAGAC+CGG | - | chr8.4:547893-547912 | MS.gene43449:CDS | 55.0% | |
TCCAACACACCCATGACCTG+CGG | + | chr8.4:548283-548302 | None:intergenic | 55.0% | |
TGATATGGGGTTTGAGCCGC+AGG | - | chr8.4:548264-548283 | MS.gene43449:CDS | 55.0% | |
TGTGACCGGCGACTTGATTG+TGG | + | chr8.4:547013-547032 | None:intergenic | 55.0% | |
TTGAAGGCTGTGGAGAAGGC+AGG | - | chr8.4:547809-547828 | MS.gene43449:CDS | 55.0% | |
TTTCGCCTAGGTGGTCTGTC+GGG | + | chr8.4:548997-549016 | None:intergenic | 55.0% | |
! | AAGGTTTGGGATCGGAGGAG+CGG | + | chr8.4:547082-547101 | None:intergenic | 55.0% |
! | ATCGGAAGGTTTGGGATCGG+AGG | + | chr8.4:547087-547106 | None:intergenic | 55.0% |
! | CCGAGGGTTTAGAGCTGGAA+TGG | - | chr8.4:547481-547500 | MS.gene43449:CDS | 55.0% |
! | CGAGCTTGCTCAGCAGATTG+AGG | - | chr8.4:548033-548052 | MS.gene43449:CDS | 55.0% |
! | GTTCACGTTGGGCTTTGGTG+AGG | + | chr8.4:546971-546990 | None:intergenic | 55.0% |
! | TGGTTTGGGGATAACGGTGG+CGG | + | chr8.4:546943-546962 | None:intergenic | 55.0% |
! | TTTGGCCGAGGGTTTAGAGC+TGG | - | chr8.4:547476-547495 | MS.gene43449:CDS | 55.0% |
!! | GCTCAGCTTCTTTTTGGCCG+AGG | - | chr8.4:547464-547483 | MS.gene43449:CDS | 55.0% |
!! | TTGCTTGGAGCGTCGCTATG+CGG | - | chr8.4:548192-548211 | MS.gene43449:CDS | 55.0% |
CAGTGCTACCATGCCTCCTG+CGG | - | chr8.4:548387-548406 | MS.gene43449:CDS | 60.0% | |
CGCAGCAGTCTTCCCAGAAC+CGG | + | chr8.4:547915-547934 | None:intergenic | 60.0% | |
CGCGTGACCACTTTGCATGG+AGG | - | chr8.4:548640-548659 | MS.gene43449:CDS | 60.0% | |
CTCGATCGTGACCACGGTCA+CGG | + | chr8.4:547130-547149 | None:intergenic | 60.0% | |
GACCGGCGACTTGATTGTGG+CGG | + | chr8.4:547010-547029 | None:intergenic | 60.0% | |
GACGGGGGCCAATTCATCAG+TGG | + | chr8.4:546919-546938 | None:intergenic | 60.0% | |
GCGGTCGGAATCGGAAGGTT+TGG | + | chr8.4:547096-547115 | None:intergenic | 60.0% | |
GGGTTTGAGCCGCAGGTCAT+GGG | - | chr8.4:548271-548290 | MS.gene43449:CDS | 60.0% | |
TCGCGCTGCTGAAGTCCAAG+CGG | + | chr8.4:547872-547891 | None:intergenic | 60.0% | |
TCGTGCAGGAAAGACGGGTG+TGG | - | chr8.4:548840-548859 | MS.gene43449:CDS | 60.0% | |
TGATGCTCAGCGGCGTAAGG+AGG | - | chr8.4:547601-547620 | MS.gene43449:CDS | 60.0% | |
TGCTGAGCAAGCTCGCGAGT+CGG | + | chr8.4:548028-548047 | None:intergenic | 60.0% | |
! | ATTGGGCGTACTGGTCGTGC+AGG | - | chr8.4:548826-548845 | MS.gene43449:CDS | 60.0% |
! | GCGTTGCTGAGACCGGTTCT+GGG | - | chr8.4:547900-547919 | MS.gene43449:CDS | 60.0% |
! | GGTTTGGGGATAACGGTGGC+GGG | + | chr8.4:546942-546961 | None:intergenic | 60.0% |
! | GTTTGGGGATAACGGTGGCG+GGG | + | chr8.4:546941-546960 | None:intergenic | 60.0% |
ACGATCGCGGCGGTCGGAAT+CGG | + | chr8.4:547105-547124 | None:intergenic | 65.0% | |
CACGGTCACGGTCACGATCG+CGG | + | chr8.4:547118-547137 | None:intergenic | 65.0% | |
CCGAGGAGGCTGATGCTCAG+CGG | - | chr8.4:547591-547610 | MS.gene43449:CDS | 65.0% | |
CCGCTGAGCATCAGCCTCCT+CGG | + | chr8.4:547594-547613 | None:intergenic | 65.0% | |
CGCCGCCACAATCAAGTCGC+CGG | - | chr8.4:547005-547024 | MS.gene43449:CDS | 65.0% | |
CGCTGAGCATCAGCCTCCTC+GGG | + | chr8.4:547593-547612 | None:intergenic | 65.0% | |
CTAGCAAGCCTCTCCACCGC+AGG | + | chr8.4:548406-548425 | None:intergenic | 65.0% | |
GCCGCAGGTCATGGGTGTGT+TGG | - | chr8.4:548279-548298 | MS.gene43449:CDS | 65.0% | |
GGCTGATGCTCAGCGGCGTA+AGG | - | chr8.4:547598-547617 | MS.gene43449:CDS | 65.0% | |
GGGGTTTGAGCCGCAGGTCA+TGG | - | chr8.4:548270-548289 | MS.gene43449:CDS | 65.0% | |
TGCTACCATGCCTCCTGCGG+TGG | - | chr8.4:548390-548409 | MS.gene43449:CDS | 65.0% | |
TGCTCAGCGGCGTAAGGAGG+AGG | - | chr8.4:547604-547623 | MS.gene43449:CDS | 65.0% | |
TGGTGTGGAGGAGAAGCCCG+AGG | - | chr8.4:547574-547593 | MS.gene43449:CDS | 65.0% | |
TGTGGAGGAGAAGCCCGAGG+AGG | - | chr8.4:547577-547596 | MS.gene43449:CDS | 65.0% | |
! | GGCGTTGCTGAGACCGGTTC+TGG | - | chr8.4:547899-547918 | MS.gene43449:CDS | 65.0% |
ACGGTCACGATCGCGGCGGT+CGG | + | chr8.4:547111-547130 | None:intergenic | 70.0% | |
CCATGCCTCCTGCGGTGGAG+AGG | - | chr8.4:548395-548414 | MS.gene43449:CDS | 70.0% | |
CCTCTCCACCGCAGGAGGCA+TGG | + | chr8.4:548398-548417 | None:intergenic | 70.0% | |
CGCGATCGTGACCGTGACCG+TGG | - | chr8.4:547116-547135 | MS.gene43449:CDS | 70.0% | |
GCAAGCCTCTCCACCGCAGG+AGG | + | chr8.4:548403-548422 | None:intergenic | 70.0% | |
GGTCACGGTCACGATCGCGG+CGG | + | chr8.4:547115-547134 | None:intergenic | 70.0% | |
TCGCGGCGGTCGGAATCGGA+AGG | + | chr8.4:547101-547120 | None:intergenic | 70.0% | |
!! | GATAACGGTGGCGGGGACGG+GGG | + | chr8.4:546934-546953 | None:intergenic | 70.0% |
!! | GGATAACGGTGGCGGGGACG+GGG | + | chr8.4:546935-546954 | None:intergenic | 70.0% |
!! | GGGATAACGGTGGCGGGGAC+GGG | + | chr8.4:546936-546955 | None:intergenic | 70.0% |
!! | GGGGATAACGGTGGCGGGGA+CGG | + | chr8.4:546937-546956 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 546906 | 549038 | 546906 | ID=MS.gene43449 |
chr8.4 | mRNA | 546906 | 549038 | 546906 | ID=MS.gene43449.t1;Parent=MS.gene43449 |
chr8.4 | exon | 546906 | 549038 | 546906 | ID=MS.gene43449.t1.exon1;Parent=MS.gene43449.t1 |
chr8.4 | CDS | 546906 | 549038 | 546906 | ID=cds.MS.gene43449.t1;Parent=MS.gene43449.t1 |
Gene Sequence |
Protein sequence |