Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44526.t1 | KEH31492.1 | 96.6 | 827 | 19 | 2 | 1 | 827 | 1 | 818 | 0.00E+00 | 1473.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44526.t1 | Q9M3H5 | 74.6 | 723 | 179 | 2 | 104 | 826 | 102 | 819 | 7.4e-312 | 1070.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44526.t1 | A0A072UP92 | 96.6 | 827 | 19 | 2 | 1 | 827 | 1 | 818 | 0.0e+00 | 1473.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene44526 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene049794 | MS.gene44526 | 0.818903 | 1.54E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene44526 | 0.825814 | 3.82E-54 | -1.69E-46 |
| MS.gene050520 | MS.gene44526 | 0.836456 | 9.26E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene44526 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene050704 | MS.gene44526 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene44526 | 0.826966 | 2.03E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene44526 | 0.82592 | 3.60E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene44526 | 0.856442 | 3.21E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene44526 | 0.835152 | 1.98E-56 | -1.69E-46 |
| MS.gene051521 | MS.gene44526 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene44526 | 0.810299 | 1.24E-50 | -1.69E-46 |
| MS.gene051588 | MS.gene44526 | 0.812794 | 3.54E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene44526 | 0.833485 | 5.19E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene44526 | 0.838732 | 2.42E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene44526 | 0.848868 | 4.66E-60 | -1.69E-46 |
| MS.gene052413 | MS.gene44526 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene44526 | 0.827994 | 1.15E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene44526 | 0.837682 | 4.50E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene44526 | 0.820561 | 6.43E-53 | -1.69E-46 |
| MS.gene052999 | MS.gene44526 | 0.835431 | 1.69E-56 | -1.69E-46 |
| MS.gene053169 | MS.gene44526 | 0.871223 | 8.05E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene44526 | 0.837835 | 4.11E-57 | -1.69E-46 |
| MS.gene053318 | MS.gene44526 | 0.892976 | 9.65E-75 | -1.69E-46 |
| MS.gene053436 | MS.gene44526 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene44526 | 0.812187 | 4.81E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene44526 | 0.828259 | 9.93E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene44526 | 0.807289 | 5.44E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene44526 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene05492 | MS.gene44526 | 0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene44526 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene44526 | 0.808725 | 2.69E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene44526 | 0.813563 | 2.40E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene44526 | 0.857019 | 2.17E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene44526 | 0.850773 | 1.37E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene44526 | 0.844008 | 9.86E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene44526 | 0.84879 | 4.90E-60 | -1.69E-46 |
| MS.gene05601 | MS.gene44526 | 0.872692 | 2.62E-67 | -1.69E-46 |
| MS.gene056040 | MS.gene44526 | 0.821483 | 3.94E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene44526 | 0.843871 | 1.07E-58 | -1.69E-46 |
| MS.gene056346 | MS.gene44526 | 0.804771 | 1.84E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene44526 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene44526 | 0.822825 | 1.93E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene44526 | 0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene057289 | MS.gene44526 | 0.818381 | 2.02E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene44526 | 0.823147 | 1.62E-53 | -1.69E-46 |
| MS.gene058090 | MS.gene44526 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene44526 | 0.870498 | 1.39E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene44526 | 0.813783 | 2.15E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene44526 | 0.885926 | 5.33E-72 | -1.69E-46 |
| MS.gene058948 | MS.gene44526 | 0.883234 | 5.33E-71 | -1.69E-46 |
| MS.gene059129 | MS.gene44526 | 0.824185 | 9.26E-54 | -1.69E-46 |
| MS.gene059303 | MS.gene44526 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene44526 | 0.800583 | 1.35E-48 | -1.69E-46 |
| MS.gene059368 | MS.gene44526 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene44526 | 0.804217 | 2.40E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene44526 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene44526 | 0.844677 | 6.52E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene44526 | 0.803668 | 3.12E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene44526 | 0.85842 | 8.34E-63 | -1.69E-46 |
| MS.gene060485 | MS.gene44526 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene44526 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene44526 | 0.864193 | 1.45E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44526 | MS.gene89039 | PPI |
| MS.gene44526 | MS.gene060874 | PPI |
| MS.gene44526 | MS.gene064391 | PPI |
| MS.gene44526 | MS.gene36218 | PPI |
| MS.gene44526 | MS.gene86378 | PPI |
| MS.gene44526 | MS.gene043599 | PPI |
| MS.gene44526 | MS.gene064361 | PPI |
| MS.gene44526 | MS.gene36217 | PPI |
| MS.gene44526 | MS.gene035831 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44526.t1 | MTR_4g094985 | 96.614 | 827 | 19 | 3 | 1 | 827 | 1 | 818 | 0.0 | 1623 |
| MS.gene44526.t1 | MTR_2g036380 | 28.257 | 637 | 389 | 14 | 161 | 789 | 27 | 603 | 1.93e-63 | 227 |
| MS.gene44526.t1 | MTR_2g036380 | 28.257 | 637 | 389 | 14 | 161 | 789 | 117 | 693 | 7.11e-63 | 227 |
| MS.gene44526.t1 | MTR_2g036380 | 28.647 | 569 | 346 | 12 | 227 | 789 | 27 | 541 | 3.08e-57 | 208 |
| MS.gene44526.t1 | MTR_2g036380 | 28.957 | 556 | 335 | 12 | 240 | 789 | 9 | 510 | 9.13e-57 | 206 |
| MS.gene44526.t1 | MTR_4g127580 | 26.357 | 645 | 397 | 12 | 160 | 784 | 109 | 695 | 4.11e-56 | 209 |
| MS.gene44526.t1 | MTR_4g094232 | 29.524 | 525 | 330 | 13 | 263 | 778 | 390 | 883 | 5.59e-54 | 202 |
| MS.gene44526.t1 | MTR_5g010420 | 29.374 | 623 | 376 | 21 | 171 | 767 | 362 | 946 | 8.43e-47 | 181 |
| MS.gene44526.t1 | MTR_8g079250 | 27.885 | 624 | 385 | 19 | 172 | 767 | 369 | 955 | 2.18e-44 | 173 |
| MS.gene44526.t1 | MTR_3g105190 | 29.119 | 522 | 322 | 11 | 263 | 763 | 354 | 848 | 2.19e-42 | 167 |
| MS.gene44526.t1 | MTR_8g012390 | 28.519 | 547 | 310 | 16 | 246 | 763 | 420 | 914 | 1.26e-41 | 164 |
| MS.gene44526.t1 | MTR_2g035840 | 25.140 | 716 | 420 | 19 | 121 | 767 | 287 | 955 | 3.88e-38 | 154 |
| MS.gene44526.t1 | MTR_4g094695 | 26.804 | 582 | 334 | 16 | 232 | 767 | 421 | 956 | 7.43e-38 | 153 |
| MS.gene44526.t1 | MTR_8g079250 | 26.386 | 523 | 329 | 16 | 172 | 673 | 369 | 856 | 3.02e-30 | 129 |
| MS.gene44526.t1 | MTR_3g105190 | 27.896 | 423 | 260 | 8 | 263 | 665 | 354 | 751 | 3.09e-30 | 128 |
| MS.gene44526.t1 | MTR_8g012390 | 26.477 | 457 | 258 | 13 | 246 | 673 | 420 | 827 | 7.03e-28 | 121 |
| MS.gene44526.t1 | MTR_8g079250 | 29.642 | 307 | 195 | 8 | 172 | 463 | 369 | 669 | 2.69e-24 | 109 |
| MS.gene44526.t1 | MTR_7g100110 | 27.053 | 207 | 109 | 7 | 605 | 770 | 638 | 843 | 4.68e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44526.t1 | AT4G37270 | 76.028 | 705 | 168 | 1 | 104 | 808 | 102 | 805 | 0.0 | 1092 |
| MS.gene44526.t1 | AT4G30110 | 25.000 | 652 | 418 | 15 | 150 | 789 | 104 | 696 | 1.63e-52 | 198 |
| MS.gene44526.t1 | AT4G30110 | 25.000 | 652 | 418 | 15 | 150 | 789 | 104 | 696 | 1.63e-52 | 198 |
| MS.gene44526.t1 | AT5G21930 | 30.256 | 585 | 348 | 16 | 209 | 763 | 286 | 840 | 1.27e-51 | 195 |
| MS.gene44526.t1 | AT5G21930 | 30.256 | 585 | 348 | 16 | 209 | 763 | 286 | 840 | 1.27e-51 | 195 |
| MS.gene44526.t1 | AT2G19110 | 25.806 | 620 | 385 | 16 | 184 | 789 | 147 | 705 | 4.23e-51 | 194 |
| MS.gene44526.t1 | AT2G19110 | 25.806 | 620 | 385 | 16 | 184 | 789 | 147 | 705 | 4.23e-51 | 194 |
| MS.gene44526.t1 | AT2G19110 | 25.806 | 620 | 385 | 16 | 184 | 789 | 147 | 705 | 4.23e-51 | 194 |
| MS.gene44526.t1 | AT5G21930 | 30.474 | 548 | 322 | 15 | 209 | 726 | 286 | 804 | 1.16e-48 | 186 |
| MS.gene44526.t1 | AT4G33520 | 28.916 | 581 | 361 | 18 | 209 | 778 | 353 | 892 | 9.52e-48 | 184 |
| MS.gene44526.t1 | AT4G33520 | 29.094 | 574 | 361 | 18 | 209 | 770 | 353 | 892 | 1.93e-47 | 182 |
| MS.gene44526.t1 | AT1G63440 | 28.185 | 628 | 378 | 19 | 171 | 767 | 369 | 954 | 6.31e-44 | 172 |
| MS.gene44526.t1 | AT5G44790 | 25.852 | 704 | 423 | 20 | 121 | 765 | 293 | 956 | 4.22e-43 | 169 |
| MS.gene44526.t1 | AT5G21930 | 28.718 | 585 | 334 | 18 | 209 | 763 | 286 | 817 | 2.47e-41 | 163 |
| MS.gene44526.t1 | AT4G30120 | 26.410 | 390 | 236 | 10 | 165 | 546 | 129 | 475 | 1.00e-31 | 131 |
| MS.gene44526.t1 | AT4G30120 | 26.836 | 354 | 213 | 9 | 201 | 546 | 1 | 316 | 3.89e-30 | 123 |
Find 189 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAGAGGTTTGATAGAAAT+TGG | 0.118156 | 8.1:-26168311 | None:intergenic |
| GGCTTCCCTTCCGTCAGTTT+TGG | 0.178850 | 8.1:+26176765 | MS.gene44526:CDS |
| TCAATTGCTATTGCTGTTCT+TGG | 0.210359 | 8.1:+26171173 | MS.gene44526:CDS |
| TATGATTATGATTATGAGTA+TGG | 0.221106 | 8.1:-26168406 | None:intergenic |
| GGCATTGTCTAGCATATTCT+TGG | 0.228426 | 8.1:+26176744 | MS.gene44526:CDS |
| AGTGAGCATCCATGTGTTAA+TGG | 0.260560 | 8.1:+26168903 | MS.gene44526:CDS |
| TGCCCTTATAATTAATAAAA+AGG | 0.279604 | 8.1:+26174152 | MS.gene44526:CDS |
| CAAAGGTGGCTGGATGAATT+TGG | 0.281364 | 8.1:+26171119 | MS.gene44526:CDS |
| TCCAGCCACCTTTGAAGTTT+AGG | 0.293991 | 8.1:-26171110 | None:intergenic |
| CGACCAGAATGAACGAGTTT+TGG | 0.294272 | 8.1:-26168667 | None:intergenic |
| GCTATTAATGCATCTTCTTA+TGG | 0.295250 | 8.1:+26174111 | MS.gene44526:CDS |
| GGATTTGATTCTTGTGGTTT+TGG | 0.298046 | 8.1:-26168258 | None:intergenic |
| ACCATTGCATTTGATAAAAC+AGG | 0.313148 | 8.1:+26173041 | MS.gene44526:CDS |
| GTCAATCCATTTGGTAGCTT+TGG | 0.315025 | 8.1:-26168534 | None:intergenic |
| GCAACTTATCTTCAGGCTTC+AGG | 0.315496 | 8.1:-26175248 | None:intergenic |
| TATTTGAAATCAAATGTATT+AGG | 0.327072 | 8.1:-26169755 | None:intergenic |
| TCAAGAACAAGTGCAAATTC+TGG | 0.329012 | 8.1:-26169713 | None:intergenic |
| ATGTTTAATCTTGCACATAT+TGG | 0.331244 | 8.1:+26168988 | MS.gene44526:CDS |
| TGGTCGCATTTCCGTTGGTT+GGG | 0.332817 | 8.1:+26168684 | MS.gene44526:CDS |
| ACTCAAAGGTGGACATGTTC+TGG | 0.334899 | 8.1:+26172998 | MS.gene44526:CDS |
| AGAGAGGTTTGATAGAAATT+GGG | 0.342658 | 8.1:-26168310 | None:intergenic |
| AAGGCAATTGAGCCTGTTTA+CGG | 0.342799 | 8.1:+26173092 | MS.gene44526:CDS |
| AAAGGATATCTCAAGAGATA+TGG | 0.345113 | 8.1:+26175278 | MS.gene44526:CDS |
| TGTCCAAAACTCGTTCATTC+TGG | 0.352789 | 8.1:+26168664 | MS.gene44526:CDS |
| GGTTCTATCTACAGAGCCTT+AGG | 0.363004 | 8.1:+26171925 | MS.gene44526:CDS |
| GACAGGTTTGATGAGTGATT+TGG | 0.363726 | 8.1:-26168645 | None:intergenic |
| AAAGTTGGAGATAGAGTTCC+TGG | 0.368979 | 8.1:+26170228 | MS.gene44526:CDS |
| CACTTGCTGCTGCAACTGTT+GGG | 0.374065 | 8.1:+26176461 | MS.gene44526:CDS |
| CTGTAATATATCATGCTTCC+AGG | 0.374765 | 8.1:-26177305 | None:intergenic |
| TGAAGTTGTCTGCCGAGATT+TGG | 0.379930 | 8.1:-26176578 | None:intergenic |
| CATGATATATTACAGTTGAT+TGG | 0.380717 | 8.1:+26177313 | MS.gene44526:CDS |
| TGCCTTGGCTGTGGCTCCAT+TGG | 0.384104 | 8.1:+26171972 | MS.gene44526:CDS |
| AATCTAGACTCTCCTCTCTT+AGG | 0.385080 | 8.1:+26177344 | MS.gene44526:CDS |
| TATGATTATGAGTATGGTTA+TGG | 0.386196 | 8.1:-26168400 | None:intergenic |
| ATGATGGAGAATGAGGAATT+TGG | 0.390636 | 8.1:-26168339 | None:intergenic |
| CTGGTCGCATTTCCGTTGGT+TGG | 0.392485 | 8.1:+26168683 | MS.gene44526:CDS |
| AGTGAGTGAAATTTGGTAGA+AGG | 0.403086 | 8.1:-26168224 | None:intergenic |
| ACATGACGCAACTTATCTTC+AGG | 0.418228 | 8.1:-26175255 | None:intergenic |
| ATTCGCTAGGTCAATCCATT+TGG | 0.420166 | 8.1:-26168543 | None:intergenic |
| GCACTTGCTGCTGCAACTGT+TGG | 0.421771 | 8.1:+26176460 | MS.gene44526:CDS |
| TCTCTTAGGACAAATATAAC+AGG | 0.423503 | 8.1:+26177358 | MS.gene44526:CDS |
| AGTGATTTGGGCAAAGTATG+AGG | 0.430434 | 8.1:-26168632 | None:intergenic |
| ATTACCATTGAGCACTTGAC+AGG | 0.431899 | 8.1:+26170183 | MS.gene44526:CDS |
| ACAGGTTTGATGAGTGATTT+GGG | 0.433483 | 8.1:-26168644 | None:intergenic |
| GATGTGAAGTGAGTGAAATT+TGG | 0.440429 | 8.1:-26168231 | None:intergenic |
| TGTTGCGGCAGCCATGGAAA+AGG | 0.442091 | 8.1:+26173187 | MS.gene44526:CDS |
| CTAATGCGATGACCGTAAAC+AGG | 0.447398 | 8.1:-26173104 | None:intergenic |
| ACAGTTGCAGCAGCAAGTGC+TGG | 0.448739 | 8.1:-26176457 | None:intergenic |
| TTGGTCCACTTGTATTTAAG+TGG | 0.454297 | 8.1:+26171192 | MS.gene44526:CDS |
| TTTGAGTACTTTCCTGGTAG+AGG | 0.454663 | 8.1:+26173625 | MS.gene44526:CDS |
| TACTGGTGGACTTGTATTCA+AGG | 0.458170 | 8.1:+26173073 | MS.gene44526:CDS |
| ACCCAAGTGATGCTTTCAAT+AGG | 0.465409 | 8.1:-26174029 | None:intergenic |
| GTGAGTGAAATTTGGTAGAA+GGG | 0.465625 | 8.1:-26168223 | None:intergenic |
| AGGAACTCTATCTCCAACTT+TGG | 0.466602 | 8.1:-26170226 | None:intergenic |
| GGTTGATGTTAAAGAGTTGA+AGG | 0.467608 | 8.1:+26169682 | MS.gene44526:CDS |
| CTGGAGGATAGGCCTCGTCC+AGG | 0.469698 | 8.1:+26175099 | MS.gene44526:CDS |
| TCAAAATGATACCTTCCAAT+GGG | 0.470455 | 8.1:-26173221 | None:intergenic |
| ACCTAAACTTCAAAGGTGGC+TGG | 0.472188 | 8.1:+26171109 | MS.gene44526:CDS |
| TTGCATTCCCACCTGTGAAA+AGG | 0.475193 | 8.1:+26173154 | MS.gene44526:CDS |
| ATTTCTTCCATTGTGGATAA+CGG | 0.475920 | 8.1:+26176789 | MS.gene44526:CDS |
| GGTCGCATTTCCGTTGGTTG+GGG | 0.477467 | 8.1:+26168685 | MS.gene44526:CDS |
| AAACCTCTGGAGGCCAAAGT+TGG | 0.479488 | 8.1:+26170213 | MS.gene44526:CDS |
| TGCAGCATCACCATGTGCCT+TGG | 0.480763 | 8.1:+26171957 | MS.gene44526:CDS |
| GTATTTCACAAGTCGTTCAA+TGG | 0.480835 | 8.1:+26169661 | MS.gene44526:CDS |
| TGGAGGATAGGCCTCGTCCA+GGG | 0.482722 | 8.1:+26175100 | MS.gene44526:CDS |
| TTCCGTGTGATGATGTTAAC+TGG | 0.483577 | 8.1:+26175162 | MS.gene44526:CDS |
| ATCACCATGTGCCTTGGCTG+TGG | 0.483615 | 8.1:+26171963 | MS.gene44526:CDS |
| AACAACGAAGTTTATGATGA+TGG | 0.484541 | 8.1:-26168355 | None:intergenic |
| GTTTCGCCAAAGCTACCAAA+TGG | 0.487686 | 8.1:+26168528 | MS.gene44526:CDS |
| GGCGGTGCAAGGAACATAGA+TGG | 0.488667 | 8.1:+26170249 | MS.gene44526:CDS |
| TCCAAAACTTGTTACCTCTC+CGG | 0.488744 | 8.1:-26169831 | None:intergenic |
| CTGGACGAGGCCTATCCTCC+AGG | 0.491201 | 8.1:-26175098 | None:intergenic |
| GTGGGATCATATGTCCTTGT+TGG | 0.491264 | 8.1:+26169806 | MS.gene44526:CDS |
| CGTTGATTCACCTGGAGGAT+AGG | 0.491810 | 8.1:+26175088 | MS.gene44526:CDS |
| CATTCTGGTCGCATTTCCGT+TGG | 0.493184 | 8.1:+26168679 | MS.gene44526:CDS |
| TAAATGAACCATCCTGGTCC+TGG | 0.493505 | 8.1:+26177287 | MS.gene44526:CDS |
| GAAATTGGGGATGTGCGAAT+AGG | 0.494228 | 8.1:-26168296 | None:intergenic |
| GGCTTAATTATGGTTGGTGA+AGG | 0.494682 | 8.1:+26176421 | MS.gene44526:CDS |
| ATCGATGATGCGAATCTCAC+TGG | 0.494904 | 8.1:+26168485 | MS.gene44526:CDS |
| TGGTTCATTTAAACCACGTA+TGG | 0.495446 | 8.1:-26177275 | None:intergenic |
| AATAGGAAAAGCGAGGTTAG+AGG | 0.496704 | 8.1:-26168279 | None:intergenic |
| TGGGGAACGCTTTGGAAGGA+GGG | 0.501834 | 8.1:+26168953 | MS.gene44526:CDS |
| GTTGCGGCAGCCATGGAAAA+GGG | 0.505287 | 8.1:+26173188 | MS.gene44526:CDS |
| GTTAGAGGATTTGATTCTTG+TGG | 0.505400 | 8.1:-26168264 | None:intergenic |
| TTCAAAATGATACCTTCCAA+TGG | 0.509760 | 8.1:-26173222 | None:intergenic |
| TCATATGTCCTTGTTGGTGC+CGG | 0.510228 | 8.1:+26169812 | MS.gene44526:CDS |
| AGGAATTTGGAAGAATAGAG+AGG | 0.513522 | 8.1:-26168326 | None:intergenic |
| GATTAAGCAAAATGTAGCTC+TGG | 0.514025 | 8.1:+26176723 | MS.gene44526:intron |
| AAGGATATCTCAAGAGATAT+GGG | 0.514882 | 8.1:+26175279 | MS.gene44526:CDS |
| TGCTGTTAACAGTAGCAGTA+AGG | 0.516956 | 8.1:-26173648 | None:intergenic |
| AACCTATTGAAAGCATCACT+TGG | 0.517138 | 8.1:+26174027 | MS.gene44526:CDS |
| CTACAGAGCCTTAGGGCTCA+TGG | 0.522521 | 8.1:+26171933 | MS.gene44526:CDS |
| CGGTCATCGCATTAGAAACA+AGG | 0.525626 | 8.1:+26173112 | MS.gene44526:CDS |
| AAAGGAAGCTCTTGCTGTTG+CGG | 0.526765 | 8.1:+26173172 | MS.gene44526:CDS |
| TTCCCCTGTCAAGTGCTCAA+TGG | 0.526856 | 8.1:-26170187 | None:intergenic |
| AGATAAGTTGCGTCATGTAA+AGG | 0.529752 | 8.1:+26175260 | MS.gene44526:CDS |
| ATGGGGAACGCTTTGGAAGG+AGG | 0.530613 | 8.1:+26168952 | MS.gene44526:CDS |
| TCTTGCTGTTGCGGCAGCCA+TGG | 0.531269 | 8.1:+26173181 | MS.gene44526:CDS |
| GTTATGATCGGTGTGATTTG+CGG | 0.532890 | 8.1:-26168378 | None:intergenic |
| GAGAGGTTTGATAGAAATTG+GGG | 0.535581 | 8.1:-26168309 | None:intergenic |
| GTTTATGATGATGGAGAATG+AGG | 0.537798 | 8.1:-26168346 | None:intergenic |
| TCTCCAACTTTGGCCTCCAG+AGG | 0.537839 | 8.1:-26170216 | None:intergenic |
| GTGATTTGGGCAAAGTATGA+GGG | 0.538012 | 8.1:-26168631 | None:intergenic |
| TTTGTTGATGCAGCTTGCAG+AGG | 0.543905 | 8.1:+26171904 | MS.gene44526:intron |
| TATCGTGGACAGGAACCCTC+TGG | 0.544668 | 8.1:-26169778 | None:intergenic |
| TATATCATGCTTCCAGGACC+AGG | 0.545479 | 8.1:-26177299 | None:intergenic |
| GACAGGGGAAGTCAAACCTC+TGG | 0.545837 | 8.1:+26170200 | MS.gene44526:CDS |
| GCAGGTCACGTTGATTCACC+TGG | 0.549731 | 8.1:+26175080 | MS.gene44526:intron |
| TGGAAAACTTCACAATCTAC+AGG | 0.552595 | 8.1:-26170147 | None:intergenic |
| ATCTCGGCAGACAACTTCAC+TGG | 0.558427 | 8.1:+26176582 | MS.gene44526:CDS |
| AAGGGCACTACCCACCCCAT+TGG | 0.559044 | 8.1:+26173206 | MS.gene44526:CDS |
| CATTCTGTATTGCCAAATCT+CGG | 0.561945 | 8.1:+26176566 | MS.gene44526:CDS |
| TATATTACAGTTGATTGGCA+AGG | 0.564000 | 8.1:+26177318 | MS.gene44526:CDS |
| TGAATAGACCTAAACTTCAA+AGG | 0.565264 | 8.1:+26171102 | MS.gene44526:CDS |
| GTACCTGGTGTACTAAAGAA+TGG | 0.569445 | 8.1:-26171215 | None:intergenic |
| CGAGATTTGGCAATACAGAA+TGG | 0.570862 | 8.1:-26176565 | None:intergenic |
| ATGATACCTTCCAATGGGGT+GGG | 0.570870 | 8.1:-26173216 | None:intergenic |
| AATGATACCTTCCAATGGGG+TGG | 0.571569 | 8.1:-26173217 | None:intergenic |
| CCCACAGTTATATCGTGGAC+AGG | 0.573819 | 8.1:-26169788 | None:intergenic |
| GTTCTATCTACAGAGCCTTA+GGG | 0.574940 | 8.1:+26171926 | MS.gene44526:CDS |
| CCATTGCATTTGATAAAACA+GGG | 0.581955 | 8.1:+26173042 | MS.gene44526:CDS |
| ATAGAGTTCCTGGCGGTGCA+AGG | 0.582278 | 8.1:+26170238 | MS.gene44526:CDS |
| GTTTGTCTCAACTCCATACG+TGG | 0.582771 | 8.1:+26177262 | MS.gene44526:CDS |
| TCTATGTTCCTTGCACCGCC+AGG | 0.583235 | 8.1:-26170246 | None:intergenic |
| TGCTGCAACCATGAGCCCTA+AGG | 0.586386 | 8.1:-26171941 | None:intergenic |
| TGCTACTGTTAACAGCATTG+AGG | 0.587811 | 8.1:+26173654 | MS.gene44526:CDS |
| TGCACAGGAGCTGATTGCTG+TGG | 0.588322 | 8.1:-26172001 | None:intergenic |
| AAAACAGGGACATTGACTAC+TGG | 0.589422 | 8.1:+26173056 | MS.gene44526:CDS |
| TAAAATGAATTGCAGGGCTG+TGG | 0.592347 | 8.1:+26173555 | MS.gene44526:intron |
| TGGCCATTCTTTAGTACACC+AGG | 0.592719 | 8.1:+26171212 | MS.gene44526:CDS |
| GAAATCCCAAAACTGACGGA+AGG | 0.592946 | 8.1:-26176771 | None:intergenic |
| TTACCATTGAGCACTTGACA+GGG | 0.593656 | 8.1:+26170184 | MS.gene44526:CDS |
| GGAGGATAGGCCTCGTCCAG+GGG | 0.594240 | 8.1:+26175101 | MS.gene44526:CDS |
| ACAGGGACATTGACTACTGG+TGG | 0.595895 | 8.1:+26173059 | MS.gene44526:CDS |
| TTGTTATAGTCAGGAGCTGG+AGG | 0.596664 | 8.1:+26174000 | MS.gene44526:intron |
| GTGGTTTAAATGAACCATCC+TGG | 0.596951 | 8.1:+26177281 | MS.gene44526:CDS |
| AATGGCCACTTAAATACAAG+TGG | 0.597154 | 8.1:-26171197 | None:intergenic |
| TTTATGGGGAACGCTTTGGA+AGG | 0.597574 | 8.1:+26168949 | MS.gene44526:CDS |
| GCTCTCTCAAGAAATTCGCT+AGG | 0.601109 | 8.1:-26168556 | None:intergenic |
| TAGTTTCTTACCCCAACCAA+CGG | 0.601581 | 8.1:-26168695 | None:intergenic |
| TGGTAATTGTGGCACCGCCG+TGG | 0.601583 | 8.1:-26170167 | None:intergenic |
| GTAGCAGTAAGGCCTCTACC+AGG | 0.601894 | 8.1:-26173637 | None:intergenic |
| ACCTATTGAAAGCATCACTT+GGG | 0.602175 | 8.1:+26174028 | MS.gene44526:CDS |
| CATCCATGTGTTAATGGCAA+TGG | 0.607256 | 8.1:+26168909 | MS.gene44526:CDS |
| TGCCAATGGAGCCACAGCCA+AGG | 0.608775 | 8.1:-26171974 | None:intergenic |
| TGTTATATTTGTCCTAAGAG+AGG | 0.609994 | 8.1:-26177356 | None:intergenic |
| CTGCCATTGCCATTAACACA+TGG | 0.611691 | 8.1:-26168912 | None:intergenic |
| CATCACAGGTAACAAAGACA+TGG | 0.612204 | 8.1:+26171030 | MS.gene44526:intron |
| ATTGCTGTGGCATATGCCAA+TGG | 0.613253 | 8.1:-26171988 | None:intergenic |
| CTGTGGTTGAACATAGTGAA+GGG | 0.614550 | 8.1:+26173572 | MS.gene44526:CDS |
| TGATTTGGGCAAAGTATGAG+GGG | 0.620042 | 8.1:-26168630 | None:intergenic |
| GCACTACCCACCCCATTGGA+AGG | 0.620348 | 8.1:+26173210 | MS.gene44526:CDS |
| ATTTGATTTCAAATACCAGA+GGG | 0.624066 | 8.1:+26169763 | MS.gene44526:CDS |
| AAATCCCAAAACTGACGGAA+GGG | 0.625234 | 8.1:-26176770 | None:intergenic |
| ATGCAGGTTCTCTTACATGA+AGG | 0.625523 | 8.1:+26177226 | MS.gene44526:intron |
| GGAGCCACAGCCAAGGCACA+TGG | 0.627092 | 8.1:-26171967 | None:intergenic |
| TGTCATACCGTTATCCACAA+TGG | 0.627678 | 8.1:-26176796 | None:intergenic |
| CTACACACATCACAAATTCG+CGG | 0.629168 | 8.1:-26177398 | None:intergenic |
| GCGTTACAGCAAAGTTGTTG+TGG | 0.631820 | 8.1:+26171145 | MS.gene44526:CDS |
| AAGAGAGTTGCAAGTGCTGT+GGG | 0.633487 | 8.1:+26175204 | MS.gene44526:CDS |
| TTGCAGGGCATATTACTCAA+AGG | 0.636255 | 8.1:+26172984 | MS.gene44526:intron |
| AAAGAGAGTTGCAAGTGCTG+TGG | 0.636430 | 8.1:+26175203 | MS.gene44526:CDS |
| GCTGTGGTTGAACATAGTGA+AGG | 0.636595 | 8.1:+26173571 | MS.gene44526:CDS |
| ACAGGTAACAAAGACATGGA+AGG | 0.636600 | 8.1:+26171034 | MS.gene44526:intron |
| TTACCTCTCCGGCACCAACA+AGG | 0.637057 | 8.1:-26169820 | None:intergenic |
| CAGGGCATATTACTCAAAGG+TGG | 0.637638 | 8.1:+26172987 | MS.gene44526:intron |
| TCCTGTCCACGATATAACTG+TGG | 0.638620 | 8.1:+26169787 | MS.gene44526:CDS |
| CCTGTCCACGATATAACTGT+GGG | 0.640509 | 8.1:+26169788 | MS.gene44526:CDS |
| TGTCCTTGTTGGTGCCGGAG+AGG | 0.641083 | 8.1:+26169817 | MS.gene44526:CDS |
| AGATGGTAGAATAATTGTGA+AGG | 0.643350 | 8.1:+26170266 | MS.gene44526:CDS |
| TCATGCTTCCAGGACCAGGA+TGG | 0.644114 | 8.1:-26177295 | None:intergenic |
| GCTCTAATTGAAATGAGTGG+TGG | 0.647769 | 8.1:+26168877 | MS.gene44526:CDS |
| ATGATCCCACAGTTATATCG+TGG | 0.648538 | 8.1:-26169793 | None:intergenic |
| AGTATGGTTATGGTTATGAT+CGG | 0.651815 | 8.1:-26168390 | None:intergenic |
| GGAAGAAATCCCAAAACTGA+CGG | 0.653538 | 8.1:-26176775 | None:intergenic |
| CACCAGTTAACATCATCACA+CGG | 0.657313 | 8.1:-26175164 | None:intergenic |
| CATTTGATTTCAAATACCAG+AGG | 0.660551 | 8.1:+26169762 | MS.gene44526:CDS |
| TACCATTGAGCACTTGACAG+GGG | 0.669528 | 8.1:+26170185 | MS.gene44526:CDS |
| GGAGTTGAGACAAACAAGCA+AGG | 0.669963 | 8.1:-26177254 | None:intergenic |
| ATAGACCTAAACTTCAAAGG+TGG | 0.670685 | 8.1:+26171105 | MS.gene44526:CDS |
| AGGGGAAGTCAAACCTCTGG+AGG | 0.671091 | 8.1:+26170203 | MS.gene44526:CDS |
| CAGGTTCTCTTACATGAAGG+CGG | 0.671593 | 8.1:+26177229 | MS.gene44526:intron |
| CAAGTGCTCAATGGTAATTG+TGG | 0.696113 | 8.1:-26170178 | None:intergenic |
| GATGCTCTAATTGAAATGAG+TGG | 0.707083 | 8.1:+26168874 | MS.gene44526:CDS |
| CAAAATGATACCTTCCAATG+GGG | 0.711661 | 8.1:-26173220 | None:intergenic |
| TTTCAACAGAGACAGAAGGG+AGG | 0.724915 | 8.1:-26173600 | None:intergenic |
| GGTCACGTTGATTCACCTGG+AGG | 0.730026 | 8.1:+26175083 | MS.gene44526:intron |
| ATGTGCGAATAGGAAAAGCG+AGG | 0.738586 | 8.1:-26168286 | None:intergenic |
| GTTGGAGATAGAGTTCCTGG+CGG | 0.796828 | 8.1:+26170231 | MS.gene44526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 26168200 | 26177411 | 26168200 | ID=MS.gene44526 |
| chr8.1 | mRNA | 26168200 | 26177411 | 26168200 | ID=MS.gene44526.t1;Parent=MS.gene44526 |
| chr8.1 | exon | 26168200 | 26168706 | 26168200 | ID=MS.gene44526.t1.exon1;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26168200 | 26168706 | 26168200 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26168859 | 26169009 | 26168859 | ID=MS.gene44526.t1.exon2;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26168859 | 26169009 | 26168859 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26169654 | 26169838 | 26169654 | ID=MS.gene44526.t1.exon3;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26169654 | 26169838 | 26169654 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26170141 | 26170287 | 26170141 | ID=MS.gene44526.t1.exon4;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26170141 | 26170287 | 26170141 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26171038 | 26171233 | 26171038 | ID=MS.gene44526.t1.exon5;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26171038 | 26171233 | 26171038 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26171917 | 26172029 | 26171917 | ID=MS.gene44526.t1.exon6;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26171917 | 26172029 | 26171917 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26172990 | 26173231 | 26172990 | ID=MS.gene44526.t1.exon7;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26172990 | 26173231 | 26172990 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26173570 | 26173675 | 26173570 | ID=MS.gene44526.t1.exon8;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26173570 | 26173675 | 26173570 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26174009 | 26174173 | 26174009 | ID=MS.gene44526.t1.exon9;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26174009 | 26174173 | 26174009 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26175084 | 26175300 | 26175084 | ID=MS.gene44526.t1.exon10;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26175084 | 26175300 | 26175084 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26176416 | 26176603 | 26176416 | ID=MS.gene44526.t1.exon11;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26176416 | 26176603 | 26176416 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26176724 | 26176810 | 26176724 | ID=MS.gene44526.t1.exon12;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26176724 | 26176810 | 26176724 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| chr8.1 | exon | 26177232 | 26177411 | 26177232 | ID=MS.gene44526.t1.exon13;Parent=MS.gene44526.t1 |
| chr8.1 | CDS | 26177232 | 26177411 | 26177232 | ID=cds.MS.gene44526.t1;Parent=MS.gene44526.t1 |
| Gene Sequence |
| Protein sequence |
