AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47818


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47818.t1 MTR_2g101890 94.737 209 1 1 1 199 1 209 1.44e-146 405
MS.gene47818.t1 MTR_4g012940 90.732 205 9 1 5 199 3 207 1.23e-138 385
MS.gene47818.t1 MTR_4g069850 81.463 205 27 2 5 199 3 206 4.32e-121 341
MS.gene47818.t1 MTR_1g097420 70.647 201 42 2 6 189 4 204 9.56e-102 292
MS.gene47818.t1 MTR_1g097420 62.281 228 42 3 6 189 4 231 1.64e-95 278
MS.gene47818.t1 MTR_8g092020 61.353 207 70 1 1 197 3 209 3.33e-92 268
MS.gene47818.t1 MTR_6g039490 63.536 181 56 1 7 177 5 185 4.08e-80 238
MS.gene47818.t1 MTR_1452s0010 81.579 76 13 1 28 102 8 83 2.23e-40 133
MS.gene47818.t1 MTR_2g005510 36.486 222 105 8 5 197 3 217 3.21e-36 126
MS.gene47818.t1 MTR_2g005500 36.816 201 107 5 10 197 9 202 1.03e-35 124
MS.gene47818.t1 MTR_8g006970 37.313 201 106 5 10 197 22 215 2.24e-35 124
MS.gene47818.t1 MTR_7g081700 37.811 201 104 6 10 197 8 200 8.83e-35 122
MS.gene47818.t1 MTR_4g064897 38.788 165 84 4 10 164 12 169 1.95e-34 121
MS.gene47818.t1 MTR_1g068740 36.098 205 110 6 10 199 15 213 5.11e-34 120
MS.gene47818.t1 MTR_2g014990 37.563 197 95 7 10 186 13 201 7.08e-34 120
MS.gene47818.t1 MTR_5g013900 35.784 204 108 4 12 199 11 207 9.15e-34 119
MS.gene47818.t1 MTR_3g069510 38.788 165 84 4 10 164 12 169 9.52e-34 120
MS.gene47818.t1 MTR_1g068730 35.610 205 111 6 10 199 15 213 1.39e-33 119
MS.gene47818.t1 MTR_1663s0010 70.667 75 22 0 102 176 1 75 1.54e-33 115
MS.gene47818.t1 MTR_4g088090 36.548 197 97 7 10 186 13 201 2.09e-33 119
MS.gene47818.t1 MTR_4g079350 39.286 168 84 5 10 166 13 173 2.74e-33 119
MS.gene47818.t1 MTR_2g096550 37.097 186 102 5 1 176 6 186 6.50e-33 117
MS.gene47818.t1 MTR_1g115325 35.437 206 109 5 10 197 15 214 1.28e-32 117
MS.gene47818.t1 MTR_8g006970 39.011 182 93 5 10 181 8 181 1.71e-32 115
MS.gene47818.t1 MTR_7g100020 39.286 168 86 4 10 167 15 176 3.19e-32 115
MS.gene47818.t1 MTR_1g052475 37.037 189 102 5 10 188 15 196 8.21e-32 115
MS.gene47818.t1 MTR_8g090215 36.765 204 106 5 12 199 11 207 1.52e-31 114
MS.gene47818.t1 MTR_3g087160 35.784 204 107 5 12 199 11 206 1.65e-31 114
MS.gene47818.t1 MTR_7g405790 35.393 178 98 4 10 177 15 185 4.23e-31 113
MS.gene47818.t1 MTR_4g099470 38.418 177 97 6 25 197 8 176 4.78e-31 112
MS.gene47818.t1 MTR_2g075950 33.493 209 111 6 10 197 13 214 5.90e-31 112
MS.gene47818.t1 MTR_4g098950 34.975 203 110 4 12 199 11 206 6.45e-31 112
MS.gene47818.t1 MTR_2g090865 38.462 169 84 6 10 166 11 171 2.49e-30 111
MS.gene47818.t1 MTR_8g036220 38.889 162 82 4 10 161 16 170 2.53e-30 111
MS.gene47818.t1 MTR_1686s0010 67.647 68 22 0 32 99 13 80 4.11e-30 106
MS.gene47818.t1 MTR_7g051940 35.465 172 94 4 10 171 13 177 5.20e-30 110
MS.gene47818.t1 MTR_6g079550 38.095 168 86 5 10 166 12 172 1.44e-29 109
MS.gene47818.t1 MTR_4g063160 35.266 207 109 7 10 197 15 215 2.43e-29 108
MS.gene47818.t1 MTR_3g064390 33.514 185 106 4 1 175 1 178 3.09e-29 107
MS.gene47818.t1 MTR_6g021790 36.628 172 92 4 10 171 6 170 4.18e-29 107
MS.gene47818.t1 MTR_5g076590 33.514 185 106 4 1 175 1 178 4.21e-29 107
MS.gene47818.t1 MTR_2g083860 37.654 162 84 4 10 161 13 167 5.17e-29 107
MS.gene47818.t1 MTR_8g103550 33.696 184 105 4 3 176 2 178 9.13e-29 106
MS.gene47818.t1 MTR_8g089985 33.721 172 97 4 3 164 10 174 1.01e-28 107
MS.gene47818.t1 MTR_3g086980 36.364 165 88 4 10 164 16 173 1.01e-28 107
MS.gene47818.t1 MTR_0262s0050 37.576 165 86 4 10 164 15 172 1.14e-28 107
MS.gene47818.t1 MTR_1g078200 35.928 167 90 5 10 166 14 173 2.05e-28 106
MS.gene47818.t1 MTR_8g093740 38.650 163 84 5 10 162 13 169 2.87e-28 105
MS.gene47818.t1 MTR_8g031680 37.430 179 92 5 3 171 2 170 7.38e-28 104
MS.gene47818.t1 MTR_8g107070 38.272 162 83 4 10 161 14 168 8.44e-28 105
MS.gene47818.t1 MTR_2g027660 37.037 162 85 4 10 161 6 160 2.22e-27 103
MS.gene47818.t1 MTR_8g027220 36.420 162 86 4 10 161 26 180 5.67e-27 102
MS.gene47818.t1 MTR_1812s0010 60.274 73 29 0 103 175 2 74 1.50e-26 97.1
MS.gene47818.t1 MTR_2g093510 79.104 67 14 0 111 177 761 827 2.68e-26 105
MS.gene47818.t1 MTR_1g029450 34.328 201 98 6 10 182 17 211 2.79e-26 100
MS.gene47818.t1 MTR_8g031870 35.152 165 90 4 7 161 3 160 3.08e-26 99.8
MS.gene47818.t1 MTR_8g031660 36.686 169 87 5 3 161 2 160 1.35e-25 98.6
MS.gene47818.t1 MTR_1g062760 38.272 162 84 5 11 162 15 170 3.00e-25 97.8
MS.gene47818.t1 MTR_7g117910 36.486 148 76 4 10 147 20 159 3.80e-25 97.4
MS.gene47818.t1 MTR_3g096350 36.810 163 87 5 10 162 12 168 7.21e-25 96.7
MS.gene47818.t1 MTR_7g103070 38.889 162 82 6 12 162 18 173 8.26e-25 96.7
MS.gene47818.t1 MTR_1g068730 39.837 123 60 2 10 122 15 133 1.00e-24 95.5
MS.gene47818.t1 MTR_1g090717 37.427 171 89 5 11 169 16 180 1.05e-24 96.3
MS.gene47818.t1 MTR_1g094220 31.868 182 106 5 7 177 28 202 1.06e-24 96.3
MS.gene47818.t1 MTR_1g068740 39.837 123 60 2 10 122 15 133 1.37e-24 95.9
MS.gene47818.t1 MTR_1g094220 32.749 171 97 5 7 166 28 191 2.10e-24 95.5
MS.gene47818.t1 MTR_2g102060 31.579 190 113 4 12 191 12 194 3.19e-24 94.7
MS.gene47818.t1 MTR_1g094220 31.282 195 107 8 7 188 28 208 4.16e-23 92.8
MS.gene47818.t1 MTR_8g031830 34.568 162 89 4 7 158 3 157 5.88e-23 91.7
MS.gene47818.t1 MTR_1g094220 32.143 168 96 5 7 163 28 188 6.00e-23 91.7
MS.gene47818.t1 MTR_3g064390 35.606 132 71 2 1 122 1 128 1.36e-22 89.4
MS.gene47818.t1 MTR_8g093740 39.098 133 74 4 31 162 10 136 1.01e-21 87.8
MS.gene47818.t1 MTR_3g096350 38.843 121 61 3 10 120 12 129 4.19e-21 85.5
MS.gene47818.t1 MTR_3g096350 38.843 121 61 3 10 120 12 129 6.30e-21 85.1
MS.gene47818.t1 MTR_5g036990 47.561 82 41 2 19 99 21 101 2.29e-18 77.4
MS.gene47818.t1 MTR_3g107713 31.325 166 84 6 11 161 14 164 1.47e-17 77.8
MS.gene47818.t1 MTR_3g107717 30.435 161 92 4 11 161 14 164 1.52e-17 77.8
MS.gene47818.t1 MTR_3g107707 30.435 161 92 4 11 161 14 164 1.55e-17 77.8
MS.gene47818.t1 MTR_6g087980 29.469 207 114 7 10 198 6 198 3.19e-17 76.6
MS.gene47818.t1 MTR_4g113620 29.775 178 100 6 11 180 14 174 3.78e-17 76.6
MS.gene47818.t1 MTR_7g103070 40.870 115 61 5 49 162 9 117 1.75e-16 73.6
MS.gene47818.t1 MTR_4g088055 29.775 178 102 6 10 169 6 178 7.20e-15 70.1
MS.gene47818.t1 MTR_2g090875 29.213 178 103 6 10 169 6 178 3.79e-14 68.2
MS.gene47818.t1 MTR_5g022600 29.213 178 103 7 10 169 6 178 1.36e-13 66.6
MS.gene47818.t1 MTR_8g075240 29.775 178 102 7 10 169 6 178 2.69e-13 65.9
MS.gene47818.t1 MTR_4g073250 27.568 185 111 6 10 176 6 185 7.71e-13 64.7
MS.gene47818.t1 MTR_3g078260 29.255 188 108 6 1 170 1 181 1.77e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47818.t1 AT1G52280 85.922 206 18 2 4 199 2 206 4.66e-130 364
MS.gene47818.t1 AT3G16100 84.390 205 21 2 5 199 3 206 1.27e-127 358
MS.gene47818.t1 AT3G18820 83.902 205 22 2 5 199 3 206 6.50e-123 346
MS.gene47818.t1 AT1G49300 80.976 205 28 2 5 199 3 206 5.34e-119 336
MS.gene47818.t1 AT1G49300 80.976 205 28 2 5 199 3 206 5.34e-119 336
MS.gene47818.t1 AT1G22740 69.417 206 47 4 5 199 3 203 3.61e-99 286
MS.gene47818.t1 AT4G09720 65.865 208 54 3 5 199 3 206 2.46e-97 281
MS.gene47818.t1 AT4G09720 62.557 219 54 4 5 199 3 217 8.40e-94 273
MS.gene47818.t1 AT4G09720 63.850 213 55 4 5 199 3 211 1.05e-93 272
MS.gene47818.t1 AT2G21880 67.222 180 49 1 6 175 5 184 1.07e-85 252
MS.gene47818.t1 AT4G09720 65.341 176 54 2 27 199 1 172 4.42e-82 241
MS.gene47818.t1 AT4G09720 65.341 176 54 2 27 199 1 172 4.42e-82 241
MS.gene47818.t1 AT4G09720 65.341 176 54 2 27 199 1 172 4.42e-82 241
MS.gene47818.t1 AT2G21880 62.778 180 49 2 6 175 5 176 6.49e-76 227
MS.gene47818.t1 AT2G21880 65.409 159 45 1 27 175 1 159 2.57e-72 217
MS.gene47818.t1 AT2G21880 65.409 159 45 1 27 175 1 159 2.57e-72 217
MS.gene47818.t1 AT5G39620 56.977 172 64 1 11 172 6 177 8.32e-67 204
MS.gene47818.t1 AT1G28550 35.714 210 106 6 10 197 13 215 3.37e-36 126
MS.gene47818.t1 AT1G09630 40.606 165 81 4 10 164 12 169 1.60e-35 124
MS.gene47818.t1 AT4G17530 38.308 201 103 6 10 197 8 200 1.90e-35 124
MS.gene47818.t1 AT5G47200 38.308 201 103 6 10 197 8 200 2.86e-35 123
MS.gene47818.t1 AT1G02130 35.821 201 109 5 10 197 8 201 6.05e-34 120
MS.gene47818.t1 AT2G33870 36.548 197 98 6 10 186 13 202 6.14e-34 120
MS.gene47818.t1 AT2G44610 36.098 205 107 4 12 199 11 208 7.20e-34 120
MS.gene47818.t1 AT5G59840 36.408 206 107 6 10 197 15 214 7.30e-34 120
MS.gene47818.t1 AT5G60860 40.741 162 79 4 10 161 13 167 9.70e-34 120
MS.gene47818.t1 AT3G53610 36.098 205 110 7 10 199 15 213 1.62e-33 119
MS.gene47818.t1 AT3G53610 36.098 205 110 7 10 199 15 213 1.62e-33 119
MS.gene47818.t1 AT3G53610 36.098 205 110 7 10 199 15 213 1.62e-33 119
MS.gene47818.t1 AT3G15060 39.877 163 81 4 9 161 12 167 1.68e-33 119
MS.gene47818.t1 AT5G45750 34.928 209 107 7 10 197 13 213 6.82e-33 117
MS.gene47818.t1 AT3G46060 35.922 206 108 6 10 197 15 214 8.92e-33 117
MS.gene47818.t1 AT3G46060 35.922 206 108 6 10 197 15 214 8.92e-33 117
MS.gene47818.t1 AT3G46060 35.922 206 108 6 10 197 15 214 8.92e-33 117
MS.gene47818.t1 AT5G59150 36.970 165 87 4 10 164 12 169 1.74e-32 116
MS.gene47818.t1 AT3G11730 36.139 202 108 5 10 197 8 202 2.34e-32 116
MS.gene47818.t1 AT1G05810 35.165 182 101 4 6 177 8 182 3.19e-32 116
MS.gene47818.t1 AT1G07410 36.970 165 87 4 10 164 12 169 4.06e-32 115
MS.gene47818.t1 AT3G46830 37.576 165 86 4 10 164 12 169 4.57e-32 115
MS.gene47818.t1 AT3G46830 37.576 165 86 4 10 164 12 169 4.57e-32 115
MS.gene47818.t1 AT1G05810 35.165 182 101 4 6 177 54 228 6.80e-32 116
MS.gene47818.t1 AT5G03520 40.476 168 84 4 10 167 15 176 8.30e-32 115
MS.gene47818.t1 AT2G31680 34.831 178 99 4 10 177 12 182 1.06e-31 114
MS.gene47818.t1 AT5G64990 37.619 210 97 7 12 199 9 206 5.63e-31 112
MS.gene47818.t1 AT3G12160 38.788 165 84 4 10 164 15 172 6.62e-31 112
MS.gene47818.t1 AT3G09900 41.071 168 83 5 10 167 15 176 7.12e-31 112
MS.gene47818.t1 AT4G18430 32.381 210 112 8 10 197 13 214 7.99e-31 112
MS.gene47818.t1 AT1G18200 39.506 162 81 4 10 161 13 167 8.27e-31 112
MS.gene47818.t1 AT2G43130 34.831 178 99 4 10 177 12 182 1.15e-30 112
MS.gene47818.t1 AT1G06400 35.025 197 103 6 10 196 13 194 1.17e-30 112
MS.gene47818.t1 AT5G47960 33.491 212 110 6 10 197 15 219 1.87e-30 111
MS.gene47818.t1 AT4G18800 38.095 168 86 5 10 166 13 173 2.19e-30 111
MS.gene47818.t1 AT5G45130 35.135 185 103 4 1 175 1 178 2.81e-30 110
MS.gene47818.t1 AT1G16920 38.095 168 86 6 10 166 13 173 4.61e-30 110
MS.gene47818.t1 AT5G10260 35.122 205 108 5 12 199 11 207 5.31e-30 110
MS.gene47818.t1 AT4G35860 37.209 172 91 4 10 171 6 170 1.31e-29 109
MS.gene47818.t1 AT4G39990 36.364 165 88 4 10 164 17 174 2.03e-29 108
MS.gene47818.t1 AT1G73640 38.272 162 83 4 10 161 13 167 2.19e-29 109
MS.gene47818.t1 AT4G19640 34.054 185 105 4 1 175 1 178 4.70e-29 107
MS.gene47818.t1 AT5G47520 35.928 167 90 4 10 166 14 173 4.74e-29 108
MS.gene47818.t1 AT3G07410 34.884 172 95 4 10 171 12 176 5.51e-29 107
MS.gene47818.t1 AT4G39890 37.805 164 86 3 11 164 10 167 7.14e-29 107
MS.gene47818.t1 AT5G65270 34.545 165 91 4 10 164 17 174 2.23e-28 106
MS.gene47818.t1 AT5G64990 36.406 217 97 8 12 199 9 213 2.57e-28 105
MS.gene47818.t1 AT4G17160 37.888 161 83 4 11 161 7 160 3.65e-28 105
MS.gene47818.t1 AT2G22290 33.981 206 109 5 12 199 11 207 1.42e-27 103
MS.gene47818.t1 AT5G45130 35.465 172 94 4 14 175 22 186 1.68e-27 103
MS.gene47818.t1 AT4G17170 37.037 162 85 4 10 161 6 160 1.90e-27 103
MS.gene47818.t1 AT1G43890 38.650 163 84 5 10 162 13 169 8.37e-27 102
MS.gene47818.t1 AT1G43890 38.650 163 84 5 10 162 13 169 8.37e-27 102
MS.gene47818.t1 AT1G43890 38.650 163 84 5 10 162 13 169 8.37e-27 102
MS.gene47818.t1 AT5G03530 36.082 194 90 7 11 176 14 201 2.32e-26 100
MS.gene47818.t1 AT5G03530 36.082 194 90 7 11 176 14 201 2.32e-26 100
MS.gene47818.t1 AT1G01200 35.185 162 89 3 10 161 28 183 8.70e-26 100
MS.gene47818.t1 AT3G54840 33.333 168 94 5 7 163 30 190 2.25e-25 97.8
MS.gene47818.t1 AT3G54840 32.584 178 102 5 7 173 30 200 5.21e-25 97.1
MS.gene47818.t1 AT5G03520 41.667 132 71 3 36 167 41 166 5.48e-25 97.1
MS.gene47818.t1 AT3G54840 33.140 172 97 5 13 173 2 166 2.93e-24 94.4
MS.gene47818.t1 AT4G19640 35.135 148 81 3 1 138 1 143 3.81e-24 93.2
MS.gene47818.t1 AT4G19640 36.641 131 69 2 1 121 1 127 9.25e-23 90.9
MS.gene47818.t1 AT5G59150 37.398 123 70 3 42 164 3 118 6.02e-22 88.2
MS.gene47818.t1 AT3G09910 35.088 171 95 5 11 171 14 178 1.05e-21 88.2
MS.gene47818.t1 AT3G09910 35.088 171 95 5 11 171 14 178 1.05e-21 88.2
MS.gene47818.t1 AT3G09910 35.802 162 88 5 11 162 14 169 1.79e-21 87.8
MS.gene47818.t1 AT3G09910 35.802 162 88 5 11 162 14 169 1.79e-21 87.8
MS.gene47818.t1 AT3G09910 35.802 162 88 5 11 162 14 169 1.79e-21 87.8
MS.gene47818.t1 AT4G35860 36.923 130 75 3 42 171 2 124 6.16e-21 85.5
MS.gene47818.t1 AT5G20020 31.325 166 84 6 11 161 14 164 1.56e-17 77.8
MS.gene47818.t1 AT5G55190 31.325 166 84 6 11 161 14 164 1.64e-17 77.8
MS.gene47818.t1 AT5G20010 31.325 166 84 6 11 161 14 164 1.68e-17 77.8
MS.gene47818.t1 AT5G55080 29.193 161 94 4 11 161 14 164 2.58e-17 77.4
MS.gene47818.t1 AT4G28950 30.435 184 107 6 10 177 6 184 1.10e-16 75.5
MS.gene47818.t1 AT5G45970 28.492 179 105 6 10 170 6 179 3.97e-14 68.2
MS.gene47818.t1 AT4G35020 29.050 179 104 6 10 170 6 179 5.34e-13 65.1
MS.gene47818.t1 AT4G35020 29.050 179 104 6 10 170 6 179 5.34e-13 65.1
MS.gene47818.t1 AT4G35020 29.050 179 104 6 10 170 6 179 5.34e-13 65.1
MS.gene47818.t1 AT5G62880 29.787 188 107 6 1 170 1 181 6.95e-13 65.1
MS.gene47818.t1 AT2G44690 28.655 171 99 6 10 162 18 183 7.97e-13 65.1
MS.gene47818.t1 AT1G20090 28.090 178 105 6 10 169 5 177 8.06e-13 64.7
MS.gene47818.t1 AT3G48040 29.787 188 107 6 1 170 1 181 8.88e-13 64.7
MS.gene47818.t1 AT1G75840 28.090 178 105 6 10 169 6 178 1.59e-12 63.9
MS.gene47818.t1 AT3G51300 28.652 178 104 6 10 169 6 178 1.67e-12 63.9
MS.gene47818.t1 AT5G09910 24.855 173 91 5 11 146 23 193 5.43e-12 63.9
MS.gene47818.t1 AT5G09910 24.855 173 91 5 11 146 23 193 5.43e-12 63.9
MS.gene47818.t1 AT2G17800 28.090 178 105 6 10 169 6 178 1.07e-11 61.6
MS.gene47818.t1 AT2G17800 28.090 178 105 6 10 169 6 178 1.07e-11 61.6
MS.gene47818.t1 AT4G35950 28.090 178 105 6 10 169 6 178 1.30e-11 61.2
MS.gene47818.t1 AT5G64813 24.873 197 102 6 11 163 23 217 1.82e-11 62.4
MS.gene47818.t1 AT5G64813 24.873 197 102 6 11 163 23 217 1.82e-11 62.4
MS.gene47818.t1 AT5G64813 24.873 197 102 6 11 163 23 217 1.82e-11 62.4

Find 53 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCGACATCAATTGTTTC+TGG 0.232108 2.1:-3354589 None:intergenic
AAAACTCACAATTCTTCTTC+AGG 0.319718 2.1:-3354232 None:intergenic
GCGAGAAGAGTTCCTTATTC+AGG 0.320875 2.1:+3353765 MS.gene47818:CDS
TTGTTTCCCAACACCACAAA+TGG 0.348208 2.1:-3353902 None:intergenic
ACTCTTCTCGCCAGTGGTTA+AGG 0.372983 2.1:-3353753 None:intergenic
TCCTGAAAACTTCCCATTTG+TGG 0.376974 2.1:+3353889 MS.gene47818:CDS
AGACAGGTTGTTCACATTGC+AGG 0.381648 2.1:+3352276 MS.gene47818:CDS
TTTGCAGAGGTCTCAAAGTA+TGG 0.397953 2.1:-3354148 None:intergenic
AACTTCCCATTTGTGGTGTT+GGG 0.400986 2.1:+3353896 MS.gene47818:CDS
GTCTTCAACTTGAACTTCCT+TGG 0.413731 2.1:-3352257 None:intergenic
GTCATCATCCTCGGTGATAG+TGG 0.414536 2.1:+3352001 MS.gene47818:CDS
ACAATTGATGTCGGTGGCGG+TGG 0.446109 2.1:+3354595 MS.gene47818:CDS
CAACTTGAACTTCCTTGGTA+AGG 0.448202 2.1:-3352252 None:intergenic
AAAGGCATGGTGTGCTTCCA+AGG 0.464084 2.1:+3354117 MS.gene47818:CDS
GATCTGGGATACTGCTGGTC+AGG 0.467671 2.1:+3353639 MS.gene47818:intron
CAGGAGAGGTTTCAAAGTCT+TGG 0.475629 2.1:+3353658 MS.gene47818:CDS
AAACTTCCCATTTGTGGTGT+TGG 0.495054 2.1:+3353895 MS.gene47818:CDS
GGAAACAAAGTAGATGTTGA+TGG 0.512592 2.1:+3353917 MS.gene47818:CDS
CTTTGAGACCTCTGCAAAGG+AGG 0.516360 2.1:+3354153 MS.gene47818:CDS
AAAGTATGGTATATTCCCCT+TGG 0.522925 2.1:-3354134 None:intergenic
AGGAAGTTCAAGTTGAAGAC+AGG 0.529226 2.1:+3352260 MS.gene47818:CDS
GGACGGCAACAGAGGTCACC+AGG 0.534201 2.1:+3354616 MS.gene47818:CDS
TGTTTCCCAACACCACAAAT+GGG 0.537488 2.1:-3353901 None:intergenic
TTGATGTCGGTGGCGGTGGA+CGG 0.543988 2.1:+3354599 MS.gene47818:CDS
TTGCAGATCTGGGATACTGC+TGG 0.559169 2.1:+3353634 MS.gene47818:intron
GCGGCGAGAATGAGAAGCCA+TGG 0.559756 2.1:-3351963 None:intergenic
GAAACAATTGATGTCGGTGG+CGG 0.576334 2.1:+3354592 MS.gene47818:CDS
GAGGTTTCAAAGTCTTGGTG+TGG 0.576541 2.1:+3353663 MS.gene47818:CDS
CTTGGTGTGGCTTTCTACCG+AGG 0.578330 2.1:+3353676 MS.gene47818:CDS
AATCAGTATAAGGCTACCAT+TGG 0.580849 2.1:+3352220 MS.gene47818:intron
TTTGAGACCTCTGCAAAGGA+GGG 0.585589 2.1:+3354154 MS.gene47818:CDS
AAGGCATGGTGTGCTTCCAA+GGG 0.586547 2.1:+3354118 MS.gene47818:CDS
GGTAAGGAAATCAGCACCAA+TGG 0.599639 2.1:-3352236 None:intergenic
TCTTATCAACATTCACAGCC+TGG 0.599998 2.1:-3354634 None:intergenic
AACAAAGTAGATGTTGATGG+TGG 0.603728 2.1:+3353920 MS.gene47818:CDS
GTGGCGGTGGACGGCAACAG+AGG 0.605632 2.1:+3354608 MS.gene47818:CDS
CTGAGAAGAAAGCAAAGGCA+TGG 0.611252 2.1:+3354104 MS.gene47818:CDS
TAAGGAACTCTTCTCGCCAG+TGG 0.617763 2.1:-3353759 None:intergenic
TCATCATCCTCGGTGATAGT+GGG 0.618638 2.1:+3352002 MS.gene47818:CDS
TTATTGAAAGTCATCATCCT+CGG 0.622878 2.1:+3351992 MS.gene47818:CDS
CCAGAAACAATTGATGTCGG+TGG 0.629506 2.1:+3354589 MS.gene47818:CDS
GGGATACTGCTGGTCAGGAG+AGG 0.630015 2.1:+3353644 MS.gene47818:CDS
TGGTGCTGATTTCCTTACCA+AGG 0.632236 2.1:+3352240 MS.gene47818:CDS
GGTTTCTGAGAAGAAAGCAA+AGG 0.639361 2.1:+3354099 MS.gene47818:intron
ATTAAAACCCTCCTTTGCAG+AGG 0.646100 2.1:-3354161 None:intergenic
ATACTTTGAGACCTCTGCAA+AGG 0.653339 2.1:+3354150 MS.gene47818:CDS
ATGCCAGAAACAATTGATGT+CGG 0.654391 2.1:+3354586 MS.gene47818:CDS
TGACATTTACATCATAAACA+AGG 0.673979 2.1:-3353714 None:intergenic
TGATGACTTTCAATAACATG+CGG 0.690006 2.1:-3351985 None:intergenic
GGACACAGCAATCTGCACCT+CGG 0.707086 2.1:-3353693 None:intergenic
AGGCATGGTGTGCTTCCAAG+GGG 0.713588 2.1:+3354119 MS.gene47818:CDS
TGACTTTCAATAACATGCGG+CGG 0.715122 2.1:-3351982 None:intergenic
TTATATACCCACTATCACCG+AGG 0.799645 2.1:-3352009 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAAATAAATAATTGA+AGG + chr2.1:3353277-3353296 MS.gene47818:intron 10.0%
!! AATTATGTATGTAATATGAA+AGG + chr2.1:3353517-3353536 MS.gene47818:intron 15.0%
!! ATTATGTATGTAATATGAAA+GGG + chr2.1:3353518-3353537 MS.gene47818:intron 15.0%
!! TTCATATTACATACATAATT+AGG - chr2.1:3353517-3353536 None:intergenic 15.0%
!!! AATCTTATTTTAATATAGAG+TGG + chr2.1:3354389-3354408 MS.gene47818:intron 15.0%
!!! CAAAAAAAAAAAAGTTTTGT+TGG + chr2.1:3354319-3354338 MS.gene47818:intron 15.0%
!! AAAGTTTAGTAATCAGTATA+AGG + chr2.1:3352210-3352229 MS.gene47818:intron 20.0%
!! CTACATGTTAAATGTTAATA+GGG - chr2.1:3352752-3352771 None:intergenic 20.0%
!! TTAGAATATTAAAGATGGTA+GGG + chr2.1:3354348-3354367 MS.gene47818:intron 20.0%
!!! AAAAAAAAAGTTTTGTTGGT+AGG + chr2.1:3354323-3354342 MS.gene47818:intron 20.0%
!!! ACCTAATTGATTTGATTTTT+AGG + chr2.1:3353853-3353872 MS.gene47818:intron 20.0%
!!! AGGATTTAGAATATTAAAGA+TGG + chr2.1:3354343-3354362 MS.gene47818:intron 20.0%
!!! ATATATTTTGACATTGAGAA+TGG - chr2.1:3352723-3352742 None:intergenic 20.0%
!!! ATTACTATCAGCTTTTAAAT+AGG - chr2.1:3352838-3352857 None:intergenic 20.0%
!!! GAATTCTGAAAAATAATTTG+AGG - chr2.1:3353974-3353993 None:intergenic 20.0%
!!! TTATTTTTATTTGTTTGGCA+GGG + chr2.1:3352150-3352169 MS.gene47818:intron 20.0%
!!! TTTAGAATATTAAAGATGGT+AGG + chr2.1:3354347-3354366 MS.gene47818:intron 20.0%
!!! TTTATTTTTATTTGTTTGGC+AGG + chr2.1:3352149-3352168 MS.gene47818:intron 20.0%
! AAAGAGCAAAACTTCTTAAA+TGG - chr2.1:3354299-3354318 None:intergenic 25.0%
! AATTGAAAAGGAAAAGGAAA+AGG - chr2.1:3352054-3352073 None:intergenic 25.0%
! AGGATCAAACAAAATATCTA+TGG - chr2.1:3354544-3354563 None:intergenic 25.0%
! AGTTATACATTCATTCATAG+CGG - chr2.1:3354454-3354473 None:intergenic 25.0%
! AGTTGAAATTGAAAAGGAAA+AGG - chr2.1:3352060-3352079 None:intergenic 25.0%
! AGTTTATACCCAAAAAAACA+GGG - chr2.1:3352878-3352897 None:intergenic 25.0%
! ATCTTAACACAATTTCTGAA+GGG + chr2.1:3353814-3353833 MS.gene47818:intron 25.0%
! GAATAAAAATCACCTGAATA+AGG - chr2.1:3353780-3353799 None:intergenic 25.0%
! GAGATAAATAACTTACAACT+CGG - chr2.1:3353952-3353971 None:intergenic 25.0%
! GATCCATTTAATCAATACAA+TGG - chr2.1:3353488-3353507 None:intergenic 25.0%
! GCCTAAAAATCAAATCAATT+AGG - chr2.1:3353857-3353876 None:intergenic 25.0%
! GCTACATGTTAAATGTTAAT+AGG - chr2.1:3352753-3352772 None:intergenic 25.0%
! TACTTCATAGATACATATCT+AGG + chr2.1:3353301-3353320 MS.gene47818:intron 25.0%
! TAGAATATTAAAGATGGTAG+GGG + chr2.1:3354349-3354368 MS.gene47818:intron 25.0%
! TAGTTTATACCCAAAAAAAC+AGG - chr2.1:3352879-3352898 None:intergenic 25.0%
! TCCTAAAACATGTCATATAT+TGG - chr2.1:3352332-3352351 None:intergenic 25.0%
! TGACATTTACATCATAAACA+AGG - chr2.1:3353717-3353736 None:intergenic 25.0%
! TGATATTCTGACATCAATTT+GGG - chr2.1:3352790-3352809 None:intergenic 25.0%
! TGTGATAGTTGAAATTGAAA+AGG - chr2.1:3352066-3352085 None:intergenic 25.0%
! TTCAACTATCACATGTTAAA+GGG + chr2.1:3352073-3352092 MS.gene47818:intron 25.0%
! TTTCAACTATCACATGTTAA+AGG + chr2.1:3352072-3352091 MS.gene47818:intron 25.0%
!! AAATTCATGTTTCTTTTTCC+TGG + chr2.1:3353430-3353449 MS.gene47818:intron 25.0%
!! AATTAATGTTCGATTCGATT+CGG + chr2.1:3352117-3352136 MS.gene47818:intron 25.0%
!! CTTTTGTCTAAGAAAGATAA+AGG - chr2.1:3353087-3353106 None:intergenic 25.0%
!! TATCAAAAAACAAAGTGTCA+TGG - chr2.1:3353336-3353355 None:intergenic 25.0%
!! TCCAATATATGACATGTTTT+AGG + chr2.1:3352328-3352347 MS.gene47818:intron 25.0%
!! TTCAGGTGATTTTTATTCTT+TGG + chr2.1:3353782-3353801 MS.gene47818:intron 25.0%
!! TTTGATTTACCATATGTTCA+CGG + chr2.1:3354034-3354053 MS.gene47818:intron 25.0%
!!! AGACCATTGTATTGATTAAA+TGG + chr2.1:3353482-3353501 MS.gene47818:intron 25.0%
!!! ATAGATATTTTGTTTGATCC+TGG + chr2.1:3354543-3354562 MS.gene47818:intron 25.0%
!!! GTATAACTTGCTATTTCAAT+TGG + chr2.1:3354466-3354485 MS.gene47818:intron 25.0%
AAAACTCACAATTCTTCTTC+AGG - chr2.1:3354235-3354254 None:intergenic 30.0%
AACAAGGTTTAAGAAGCTAT+TGG + chr2.1:3353184-3353203 MS.gene47818:intron 30.0%
ACAAGGTTTAAGAAGCTATT+GGG + chr2.1:3353185-3353204 MS.gene47818:intron 30.0%
ACACTGTCGTAAATTGTAAT+CGG - chr2.1:3352640-3352659 None:intergenic 30.0%
AGAATATTAAAGATGGTAGG+GGG + chr2.1:3354350-3354369 MS.gene47818:intron 30.0%
AGATTCTTGAGCAATATGTT+TGG - chr2.1:3353253-3353272 None:intergenic 30.0%
AGTCTATCAACTACATATGA+TGG - chr2.1:3353996-3354015 None:intergenic 30.0%
CAATATTAAGTGTATGACCT+TGG - chr2.1:3352447-3352466 None:intergenic 30.0%
CATGTCATATATTGGAAACA+CGG - chr2.1:3352324-3352343 None:intergenic 30.0%
CTTAGACAAAAGTCAAATGT+TGG + chr2.1:3353095-3353114 MS.gene47818:intron 30.0%
GACAAATGTTAGTAAGTTAG+CGG + chr2.1:3352392-3352411 MS.gene47818:intron 30.0%
GAGAATGGAAAAAAGAAGTA+TGG - chr2.1:3352708-3352727 None:intergenic 30.0%
GATATCTCTTCAATGTGATT+TGG - chr2.1:3353230-3353249 None:intergenic 30.0%
GATCTTAACACAATTTCTGA+AGG + chr2.1:3353813-3353832 MS.gene47818:intron 30.0%
GATTCTTGAGCAATATGTTT+GGG - chr2.1:3353252-3353271 None:intergenic 30.0%
GTGATATTCTGACATCAATT+TGG - chr2.1:3352791-3352810 None:intergenic 30.0%
TCAATATGTAACCGAATTAG+TGG + chr2.1:3352611-3352630 MS.gene47818:intron 30.0%
TCACTACATGATGAAAAACA+AGG + chr2.1:3353168-3353187 MS.gene47818:intron 30.0%
TGATGACTTTCAATAACATG+CGG - chr2.1:3351988-3352007 None:intergenic 30.0%
TTATTGAAAGTCATCATCCT+CGG + chr2.1:3351992-3352011 MS.gene47818:CDS 30.0%
TTGATTTACCATATGTTCAC+GGG + chr2.1:3354035-3354054 MS.gene47818:intron 30.0%
! AATTTAATCCTGTGCACTTT+TGG + chr2.1:3353128-3353147 MS.gene47818:intron 30.0%
! GTTTCTTTTTCCTGGATAAA+AGG + chr2.1:3353438-3353457 MS.gene47818:intron 30.0%
! TATCAGCTTTTAAATAGGAC+TGG - chr2.1:3352833-3352852 None:intergenic 30.0%
!! ACAAAAGCATCTTCTAACTT+TGG + chr2.1:3352955-3352974 MS.gene47818:intron 30.0%
!!! GTTTTAGGATCTATAAAGCT+CGG + chr2.1:3352343-3352362 MS.gene47818:intron 30.0%
!!! TTCATCTACCCTGTTTTTTT+GGG + chr2.1:3352867-3352886 MS.gene47818:intron 30.0%
!!! TTCATTCTTGAGAGCATTTT+TGG - chr2.1:3354212-3354231 None:intergenic 30.0%
!!! TTTCATCTACCCTGTTTTTT+TGG + chr2.1:3352866-3352885 MS.gene47818:intron 30.0%
AAAGGAAAAGGAAAAGGAGA+AGG - chr2.1:3352048-3352067 None:intergenic 35.0%
AAAGTATGGTATATTCCCCT+TGG - chr2.1:3354137-3354156 None:intergenic 35.0%
AATCAGTATAAGGCTACCAT+TGG + chr2.1:3352220-3352239 MS.gene47818:intron 35.0%
ATCTGTCATAATCAACAACC+AGG - chr2.1:3354564-3354583 None:intergenic 35.0%
ATGCCAGAAACAATTGATGT+CGG + chr2.1:3354586-3354605 MS.gene47818:CDS 35.0%
ATGTAGTGAGAGGAACAAAA+TGG - chr2.1:3353157-3353176 None:intergenic 35.0%
ATTAAGTGTATGACCTTGGT+AGG - chr2.1:3352443-3352462 None:intergenic 35.0%
GAGACAAGAATGTCAAACAT+TGG - chr2.1:3353051-3353070 None:intergenic 35.0%
GGAAACAAAGTAGATGTTGA+TGG + chr2.1:3353917-3353936 MS.gene47818:CDS 35.0%
TGAGATATGATGACATGGTT+GGG + chr2.1:3353405-3353424 MS.gene47818:intron 35.0%
TGATTTACCATATGTTCACG+GGG + chr2.1:3354036-3354055 MS.gene47818:intron 35.0%
TTGAGATATGATGACATGGT+TGG + chr2.1:3353404-3353423 MS.gene47818:intron 35.0%
TTTATGCGCATTGTTAACTG+TGG + chr2.1:3354272-3354291 MS.gene47818:intron 35.0%
! AACAAAGTAGATGTTGATGG+TGG + chr2.1:3353920-3353939 MS.gene47818:CDS 35.0%
! GTTTCAAGTGATTCTCTTTG+AGG + chr2.1:3354500-3354519 MS.gene47818:intron 35.0%
! GTTTTTCATCATGTAGTGAG+AGG - chr2.1:3353167-3353186 None:intergenic 35.0%
! TTAACACAATTTCTGAAGGG+CGG + chr2.1:3353817-3353836 MS.gene47818:intron 35.0%
! TTTAAATAGGACTGGTGAAG+TGG - chr2.1:3352825-3352844 None:intergenic 35.0%
! TTTTGTGACTAGTGTGAACA+AGG - chr2.1:3352941-3352960 None:intergenic 35.0%
!! AAAGGAGGGTTTTAATGTTG+AGG + chr2.1:3354168-3354187 MS.gene47818:CDS 35.0%
!! CTTTTGAAAACCTTAACCAC+TGG + chr2.1:3353743-3353762 MS.gene47818:CDS 35.0%
!! TTTTATTTGTTTGGCAGGGT+TGG + chr2.1:3352154-3352173 MS.gene47818:intron 35.0%
AAACTTCCCATTTGTGGTGT+TGG + chr2.1:3353895-3353914 MS.gene47818:CDS 40.0%
AACTTCCCATTTGTGGTGTT+GGG + chr2.1:3353896-3353915 MS.gene47818:CDS 40.0%
AGACTTTCTTCCTCTTGAGA+GGG + chr2.1:3354011-3354030 MS.gene47818:intron 40.0%
AGTCTGTGCTTCTTTCGTTA+CGG - chr2.1:3352671-3352690 None:intergenic 40.0%
ATTAAAACCCTCCTTTGCAG+AGG - chr2.1:3354164-3354183 None:intergenic 40.0%
ATTTACCATATGTTCACGGG+GGG + chr2.1:3354038-3354057 MS.gene47818:intron 40.0%
CAACTTGAACTTCCTTGGTA+AGG - chr2.1:3352255-3352274 None:intergenic 40.0%
GATTTACCATATGTTCACGG+GGG + chr2.1:3354037-3354056 MS.gene47818:intron 40.0%
GTAAATCAAACCCTCTCAAG+AGG - chr2.1:3354024-3354043 None:intergenic 40.0%
GTAATCGGCATCCACTAATT+CGG - chr2.1:3352625-3352644 None:intergenic 40.0%
GTCTTCAACTTGAACTTCCT+TGG - chr2.1:3352260-3352279 None:intergenic 40.0%
GTGCTTGAGATATGATGACA+TGG + chr2.1:3353400-3353419 MS.gene47818:intron 40.0%
TAGACTTTCTTCCTCTTGAG+AGG + chr2.1:3354010-3354029 MS.gene47818:intron 40.0%
TCCTGAAAACTTCCCATTTG+TGG + chr2.1:3353889-3353908 MS.gene47818:CDS 40.0%
TCGACGAGACAACACATATA+CGG + chr2.1:3352471-3352490 MS.gene47818:intron 40.0%
TGACTTTCAATAACATGCGG+CGG - chr2.1:3351985-3352004 None:intergenic 40.0%
TGTTTCCCAACACCACAAAT+GGG - chr2.1:3353904-3353923 None:intergenic 40.0%
TTACATGACCCACTTGAAGA+TGG - chr2.1:3353021-3353040 None:intergenic 40.0%
TTATATACCCACTATCACCG+AGG - chr2.1:3352012-3352031 None:intergenic 40.0%
TTGTTTCCCAACACCACAAA+TGG - chr2.1:3353905-3353924 None:intergenic 40.0%
TTTGCAGAGGTCTCAAAGTA+TGG - chr2.1:3354151-3354170 None:intergenic 40.0%
! AATGGATTCCAAAAGTGCAC+AGG - chr2.1:3353139-3353158 None:intergenic 40.0%
! ACCACAAATGGGAAGTTTTC+AGG - chr2.1:3353893-3353912 None:intergenic 40.0%
! GAAGCTATTGGGCATGTTTT+TGG + chr2.1:3353196-3353215 MS.gene47818:intron 40.0%
! GCATTTGTTGCTTCTGTTTC+AGG + chr2.1:3354078-3354097 MS.gene47818:intron 40.0%
! GGTTTCTGAGAAGAAAGCAA+AGG + chr2.1:3354099-3354118 MS.gene47818:intron 40.0%
! TCAAGTGATTCTCTTTGAGG+AGG + chr2.1:3354503-3354522 MS.gene47818:intron 40.0%
!! AGGAAGTTCAAGTTGAAGAC+AGG + chr2.1:3352260-3352279 MS.gene47818:CDS 40.0%
!! ATACTTTGAGACCTCTGCAA+AGG + chr2.1:3354150-3354169 MS.gene47818:CDS 40.0%
!!! AAGCATCGATCCTTTTATCC+AGG - chr2.1:3353451-3353470 None:intergenic 40.0%
ACCAATTGAGCTTCCTACCA+AGG + chr2.1:3352427-3352446 MS.gene47818:intron 45.0%
ACCTTGGTAGGAAGCTCAAT+TGG - chr2.1:3352431-3352450 None:intergenic 45.0%
AGACAGGTTGTTCACATTGC+AGG + chr2.1:3352276-3352295 MS.gene47818:CDS 45.0%
AGTTCACCACCATCTTCAAG+TGG + chr2.1:3353009-3353028 MS.gene47818:intron 45.0%
CAGGAGAGGTTTCAAAGTCT+TGG + chr2.1:3353658-3353677 MS.gene47818:CDS 45.0%
CCACCGACATCAATTGTTTC+TGG - chr2.1:3354592-3354611 None:intergenic 45.0%
CCAGAAACAATTGATGTCGG+TGG + chr2.1:3354589-3354608 MS.gene47818:CDS 45.0%
CGACGAGACAACACATATAC+GGG + chr2.1:3352472-3352491 MS.gene47818:intron 45.0%
CGTTGTGTACTTGCAGATCT+GGG + chr2.1:3353624-3353643 MS.gene47818:intron 45.0%
CTGAGAAGAAAGCAAAGGCA+TGG + chr2.1:3354104-3354123 MS.gene47818:CDS 45.0%
GAAACAATTGATGTCGGTGG+CGG + chr2.1:3354592-3354611 MS.gene47818:CDS 45.0%
GAGGTTTCAAAGTCTTGGTG+TGG + chr2.1:3353663-3353682 MS.gene47818:CDS 45.0%
GCGAGAAGAGTTCCTTATTC+AGG + chr2.1:3353765-3353784 MS.gene47818:CDS 45.0%
GGTAAGGAAATCAGCACCAA+TGG - chr2.1:3352239-3352258 None:intergenic 45.0%
GTCTGTGCTTCTTTCGTTAC+GGG - chr2.1:3352670-3352689 None:intergenic 45.0%
GTTCACCACCATCTTCAAGT+GGG + chr2.1:3353010-3353029 MS.gene47818:intron 45.0%
TCATCATCCTCGGTGATAGT+GGG + chr2.1:3352002-3352021 MS.gene47818:CDS 45.0%
TCGTTGTGTACTTGCAGATC+TGG + chr2.1:3353623-3353642 MS.gene47818:intron 45.0%
TTTACCATATGTTCACGGGG+GGG + chr2.1:3354039-3354058 MS.gene47818:intron 45.0%
! GTGATTCTCTTTGAGGAGGA+TGG + chr2.1:3354507-3354526 MS.gene47818:intron 45.0%
! TGGTGGTGAACTTCATGAAC+AGG - chr2.1:3353001-3353020 None:intergenic 45.0%
! TTCTCTTTGAGGAGGATGGT+TGG + chr2.1:3354511-3354530 MS.gene47818:intron 45.0%
! TTTGAGACCTCTGCAAAGGA+GGG + chr2.1:3354154-3354173 MS.gene47818:CDS 45.0%
!! GGGAAGTTTTCAGGATCAGA+TGG - chr2.1:3353884-3353903 None:intergenic 45.0%
!! TGGTGCTGATTTCCTTACCA+AGG + chr2.1:3352240-3352259 MS.gene47818:CDS 45.0%
!!! TTTTTTTATTTTTATTTGTT+TGG + chr2.1:3352145-3352164 MS.gene47818:intron 5.0%
AAGGCATGGTGTGCTTCCAA+GGG + chr2.1:3354118-3354137 MS.gene47818:CDS 50.0%
ACTCTTCTCGCCAGTGGTTA+AGG - chr2.1:3353756-3353775 None:intergenic 50.0%
CATGACCCACTTGAAGATGG+TGG - chr2.1:3353018-3353037 None:intergenic 50.0%
GTCATCATCCTCGGTGATAG+TGG + chr2.1:3352001-3352020 MS.gene47818:CDS 50.0%
TAAGGAACTCTTCTCGCCAG+TGG - chr2.1:3353762-3353781 None:intergenic 50.0%
TTAACCCCCCCGTGAACATA+TGG - chr2.1:3354046-3354065 None:intergenic 50.0%
! AAAGGCATGGTGTGCTTCCA+AGG + chr2.1:3354117-3354136 MS.gene47818:CDS 50.0%
! TAGGACTGGTGAAGTGGTGA+TGG - chr2.1:3352819-3352838 None:intergenic 50.0%
! TTGCAGATCTGGGATACTGC+TGG + chr2.1:3353634-3353653 MS.gene47818:intron 50.0%
!! CTTTGAGACCTCTGCAAAGG+AGG + chr2.1:3354153-3354172 MS.gene47818:CDS 50.0%
AGGCATGGTGTGCTTCCAAG+GGG + chr2.1:3354119-3354138 MS.gene47818:CDS 55.0%
GGACACAGCAATCTGCACCT+CGG - chr2.1:3353696-3353715 None:intergenic 55.0%
! ACAATTGATGTCGGTGGCGG+TGG + chr2.1:3354595-3354614 MS.gene47818:CDS 55.0%
! CTTGGTGTGGCTTTCTACCG+AGG + chr2.1:3353676-3353695 MS.gene47818:CDS 55.0%
! GATCTGGGATACTGCTGGTC+AGG + chr2.1:3353639-3353658 MS.gene47818:intron 55.0%
GGGATACTGCTGGTCAGGAG+AGG + chr2.1:3353644-3353663 MS.gene47818:CDS 60.0%
! TTGATGTCGGTGGCGGTGGA+CGG + chr2.1:3354599-3354618 MS.gene47818:CDS 60.0%
GGACGGCAACAGAGGTCACC+AGG + chr2.1:3354616-3354635 MS.gene47818:CDS 65.0%
GTGGCGGTGGACGGCAACAG+AGG + chr2.1:3354608-3354627 MS.gene47818:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 3351965 3354651 3351965 ID=MS.gene47818
chr2.1 mRNA 3351965 3354651 3351965 ID=MS.gene47818.t1;Parent=MS.gene47818
chr2.1 exon 3351965 3352023 3351965 ID=MS.gene47818.t1.exon1;Parent=MS.gene47818.t1
chr2.1 CDS 3351965 3352023 3351965 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3352171 3352201 3352171 ID=MS.gene47818.t1.exon2;Parent=MS.gene47818.t1
chr2.1 CDS 3352171 3352201 3352171 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3352232 3352297 3352232 ID=MS.gene47818.t1.exon3;Parent=MS.gene47818.t1
chr2.1 CDS 3352232 3352297 3352232 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3353640 3353786 3353640 ID=MS.gene47818.t1.exon4;Parent=MS.gene47818.t1
chr2.1 CDS 3353640 3353786 3353640 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3353875 3353955 3353875 ID=MS.gene47818.t1.exon5;Parent=MS.gene47818.t1
chr2.1 CDS 3353875 3353955 3353875 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3354100 3354245 3354100 ID=MS.gene47818.t1.exon6;Parent=MS.gene47818.t1
chr2.1 CDS 3354100 3354245 3354100 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
chr2.1 exon 3354582 3354651 3354582 ID=MS.gene47818.t1.exon7;Parent=MS.gene47818.t1
chr2.1 CDS 3354582 3354651 3354582 ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1
Gene Sequence

>MS.gene47818

ATGGCTTCTCATTCTCGCCGCCGCATGTTATTGAAAGTCATCATCCTCGGTGATAGTGGGTATATAATATATATTCTTCTCCTTCTCCTTTTCCTTTTCCTTTTCAATTTCAACTATCACATGTTAAAGGGTCGAATAGATTTATTAGATTAAATTAATGTTCGATTCGATTCGGTTTTTTTTTTTTATTTTTATTTGTTTGGCAGGGTTGGCAAAACATCACTCATGAATCAGTATGTGAATCGAAAGTTTAGTAATCAGTATAAGGCTACCATTGGTGCTGATTTCCTTACCAAGGAAGTTCAAGTTGAAGACAGGTTGTTCACATTGCAGGTATTTAATCTAAATCATTTTTACCGTGTTTCCAATATATGACATGTTTTAGGATCTATAAAGCTCGGATATTTTTTTTCTTTTTTTTTTTATAGACAAATGTTAGTAAGTTAGCGGTTATGTTAGTTAACCAATTGAGCTTCCTACCAAGGTCATACACTTAATATTGCACGTCGACGAGACAACACATATACGGGAAAAATTTTAAACGCTCGAGATACACGATATGTTCAATTAAGTTAACATGAATTTATTGCATACATACACATTACAAATAAATGCATAACGTTTGTAAAGACGTTAAAATATCTAATCAATATGTAACCGAATTAGTGGATGCCGATTACAATTTACGACAGTGTAGTTGTGCCCGTAACGAAAGAAGCACAGACTCATAGATTTGTATACCATACTTCTTTTTTCCATTCTCAATGTCAAAATATATTCTTTTCCCTATTAACATTTAACATGTAGCACAAATTTGTTTTTCCCAAATTGATGTCAGAATATCACTAAGACCATCACCACTTCACCAGTCCTATTTAAAAGCTGATAGTAATTGTGTCATTTTCATCTACCCTGTTTTTTTGGGTATAAACTACAATTTACAATCTAATAGTAACTGTGTCATTTTCATCTACCTTGTTCACACTAGTCACAAAAGCATCTTCTAACTTTGGTTCTGCAAGCAACAAAACTACCTGTTCATGAAGTTCACCACCATCTTCAAGTGGGTCATGTAAATATTTACCAATGTTTGACATTCTTGTCTCTCATTTAGTATATCCTTTATCTTTCTTAGACAAAAGTCAAATGTTGGAATGCACGCAAATTTAATCCTGTGCACTTTTGGAATCCATTTTGTTCCTCTCACTACATGATGAAAAACAAGGTTTAAGAAGCTATTGGGCATGTTTTTGGAGCAGTATCCAAATCACATTGAAGAGATATCCCAAACATATTGCTCAAGAATCTCATGAACAATAAATAAATAATTGAAGGATACTTCATAGATACATATCTAGGCATATTTTACCATGACACTTTGTTTTTTGATATATATGCTGTCAGTATGTGACTTTTCTACTGAGTACTTTCTACTGTGCTTGAGATATGATGACATGGTTGGGTTAAATTCATGTTTCTTTTTCCTGGATAAAAGGATCGATGCTTAAGTTTTTTGTAGACCATTGTATTGATTAAATGGATCTGCTTTCCTAATTATGTATGTAATATGAAAGGGAGATCAAATGTTTTTGATTGCTCACAAATTGCATTGATTTAAGAGAATCTTTTAATTGTATATATCTAAAATAAAGATGTTCTCGTTGTGTACTTGCAGATCTGGGATACTGCTGGTCAGGAGAGGTTTCAAAGTCTTGGTGTGGCTTTCTACCGAGGTGCAGATTGCTGTGTCCTTGTTTATGATGTAAATGTCATGAAATCTTTTGAAAACCTTAACCACTGGCGAGAAGAGTTCCTTATTCAGGTGATTTTTATTCTTTGGCTTCTTAAGATCTTAACACAATTTCTGAAGGGCGGTGATTAATATCACACCTAATTGATTTGATTTTTAGGCTAGTCCATCTGATCCTGAAAACTTCCCATTTGTGGTGTTGGGAAACAAAGTAGATGTTGATGGTGGAAATAGCCGAGTTGTAAGTTATTTATCTCCTCAAATTATTTTTCAGAATTCCATCATATGTAGTTGATAGACTTTCTTCCTCTTGAGAGGGTTTGATTTACCATATGTTCACGGGGGGGTTAATTCTACATGTCTGCATTTGTTGCTTCTGTTTCAGGTTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCCAAGGGGAATATACCATACTTTGAGACCTCTGCAAAGGAGGGTTTTAATGTTGAGGCTGCTTTTGAGTGTATTACCAAAAATGCTCTCAAGAATGAACCTGAAGAAGAATTGTGAGTTTTCGTAAATTTTAGTGTTTTTTATGCGCATTGTTAACTGTGGACCATTTAAGAAGTTTTGCTCTTTCAAAAAAAAAAAAGTTTTGTTGGTAGGATTTAGAATATTAAAGATGGTAGGGGGAGAAAGAAAAAGATGCAATCTTATTTTAATATAGAGTGGCTTTGATTCACAACTTTGATTTGTTTTTCATTTCTTTCACCGCTATGAATGAATGTATAACTTGCTATTTCAATTGGAGCACTAGCTAGTTTCAAGTGATTCTCTTTGAGGAGGATGGTTGGAATACTTCCATAGATATTTTGTTTGATCCTGGTTGTTGATTATGACAGATACATGCCAGAAACAATTGATGTCGGTGGCGGTGGACGGCAACAGAGGTCACCAGGCTGTGAATGTTGA

Protein sequence

>MS.gene47818.t1

MASHSRRRMLLKVIILGDSGVGKTSLMNQYATIGADFLTKEVQVEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECITKNALKNEPEEELYMPETIDVGGGGRQQRSPGCEC