Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47818.t1 | XP_003597752.1 | 94.7 | 209 | 1 | 1 | 1 | 199 | 1 | 209 | 4.30E-108 | 400.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47818.t1 | O24461 | 88.3 | 205 | 14 | 1 | 5 | 199 | 3 | 207 | 3.0e-102 | 372.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47818.t1 | G7II22 | 94.7 | 209 | 1 | 1 | 1 | 199 | 1 | 209 | 3.1e-108 | 400.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene47818 | 0.800204 | 1.61E-48 | -1.69E-46 |
MS.gene049424 | MS.gene47818 | 0.815265 | 1.01E-51 | -1.69E-46 |
MS.gene049674 | MS.gene47818 | 0.800024 | 1.75E-48 | -1.69E-46 |
MS.gene049861 | MS.gene47818 | 0.811438 | 7.00E-51 | -1.69E-46 |
MS.gene049951 | MS.gene47818 | 0.815474 | 9.08E-52 | -1.69E-46 |
MS.gene049983 | MS.gene47818 | 0.80653 | 7.87E-50 | -1.69E-46 |
MS.gene050084 | MS.gene47818 | 0.811355 | 7.30E-51 | -1.69E-46 |
MS.gene050085 | MS.gene47818 | 0.836393 | 9.61E-57 | -1.69E-46 |
MS.gene050359 | MS.gene47818 | 0.829624 | 4.64E-55 | -1.69E-46 |
MS.gene050384 | MS.gene47818 | 0.80078 | 1.23E-48 | -1.69E-46 |
MS.gene050386 | MS.gene47818 | 0.814906 | 1.21E-51 | -1.69E-46 |
MS.gene050752 | MS.gene47818 | 0.822323 | 2.52E-53 | -1.69E-46 |
MS.gene050955 | MS.gene47818 | 0.802037 | 6.78E-49 | -1.69E-46 |
MS.gene051003 | MS.gene47818 | 0.832657 | 8.34E-56 | -1.69E-46 |
MS.gene051184 | MS.gene47818 | 0.824818 | 6.57E-54 | -1.69E-46 |
MS.gene051987 | MS.gene47818 | 0.812713 | 3.69E-51 | -1.69E-46 |
MS.gene052242 | MS.gene47818 | -0.827783 | 1.29E-54 | -1.69E-46 |
MS.gene052954 | MS.gene47818 | 0.807116 | 5.92E-50 | -1.69E-46 |
MS.gene053058 | MS.gene47818 | 0.841085 | 5.89E-58 | -1.69E-46 |
MS.gene05344 | MS.gene47818 | -0.827665 | 1.38E-54 | -1.69E-46 |
MS.gene053564 | MS.gene47818 | 0.800604 | 1.33E-48 | -1.69E-46 |
MS.gene053575 | MS.gene47818 | 0.839432 | 1.59E-57 | -1.69E-46 |
MS.gene053879 | MS.gene47818 | 0.808089 | 3.68E-50 | -1.69E-46 |
MS.gene054403 | MS.gene47818 | 0.821116 | 4.79E-53 | -1.69E-46 |
MS.gene056071 | MS.gene47818 | 0.81353 | 2.44E-51 | -1.69E-46 |
MS.gene056097 | MS.gene47818 | 0.803957 | 2.72E-49 | -1.69E-46 |
MS.gene056787 | MS.gene47818 | 0.827276 | 1.71E-54 | -1.69E-46 |
MS.gene056849 | MS.gene47818 | 0.843934 | 1.03E-58 | -1.69E-46 |
MS.gene057108 | MS.gene47818 | 0.81187 | 5.64E-51 | -1.69E-46 |
MS.gene057109 | MS.gene47818 | 0.813809 | 2.12E-51 | -1.69E-46 |
MS.gene057110 | MS.gene47818 | 0.807109 | 5.93E-50 | -1.69E-46 |
MS.gene057234 | MS.gene47818 | 0.806719 | 7.18E-50 | -1.69E-46 |
MS.gene057392 | MS.gene47818 | 0.824459 | 7.98E-54 | -1.69E-46 |
MS.gene05781 | MS.gene47818 | 0.816513 | 5.32E-52 | -1.69E-46 |
MS.gene057999 | MS.gene47818 | 0.850844 | 1.31E-60 | -1.69E-46 |
MS.gene058008 | MS.gene47818 | 0.801547 | 8.55E-49 | -1.69E-46 |
MS.gene058054 | MS.gene47818 | 0.849033 | 4.19E-60 | -1.69E-46 |
MS.gene058055 | MS.gene47818 | 0.826336 | 2.87E-54 | -1.69E-46 |
MS.gene058238 | MS.gene47818 | 0.800076 | 1.71E-48 | -1.69E-46 |
MS.gene059007 | MS.gene47818 | 0.814694 | 1.35E-51 | -1.69E-46 |
MS.gene059050 | MS.gene47818 | 0.80637 | 8.50E-50 | -1.69E-46 |
MS.gene059146 | MS.gene47818 | 0.825138 | 5.52E-54 | -1.69E-46 |
MS.gene059290 | MS.gene47818 | 0.80911 | 2.22E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47818.t1 | MTR_2g101890 | 94.737 | 209 | 1 | 1 | 1 | 199 | 1 | 209 | 1.44e-146 | 405 |
MS.gene47818.t1 | MTR_4g012940 | 90.732 | 205 | 9 | 1 | 5 | 199 | 3 | 207 | 1.23e-138 | 385 |
MS.gene47818.t1 | MTR_4g069850 | 81.463 | 205 | 27 | 2 | 5 | 199 | 3 | 206 | 4.32e-121 | 341 |
MS.gene47818.t1 | MTR_1g097420 | 70.647 | 201 | 42 | 2 | 6 | 189 | 4 | 204 | 9.56e-102 | 292 |
MS.gene47818.t1 | MTR_1g097420 | 62.281 | 228 | 42 | 3 | 6 | 189 | 4 | 231 | 1.64e-95 | 278 |
MS.gene47818.t1 | MTR_8g092020 | 61.353 | 207 | 70 | 1 | 1 | 197 | 3 | 209 | 3.33e-92 | 268 |
MS.gene47818.t1 | MTR_6g039490 | 63.536 | 181 | 56 | 1 | 7 | 177 | 5 | 185 | 4.08e-80 | 238 |
MS.gene47818.t1 | MTR_1452s0010 | 81.579 | 76 | 13 | 1 | 28 | 102 | 8 | 83 | 2.23e-40 | 133 |
MS.gene47818.t1 | MTR_2g005510 | 36.486 | 222 | 105 | 8 | 5 | 197 | 3 | 217 | 3.21e-36 | 126 |
MS.gene47818.t1 | MTR_2g005500 | 36.816 | 201 | 107 | 5 | 10 | 197 | 9 | 202 | 1.03e-35 | 124 |
MS.gene47818.t1 | MTR_8g006970 | 37.313 | 201 | 106 | 5 | 10 | 197 | 22 | 215 | 2.24e-35 | 124 |
MS.gene47818.t1 | MTR_7g081700 | 37.811 | 201 | 104 | 6 | 10 | 197 | 8 | 200 | 8.83e-35 | 122 |
MS.gene47818.t1 | MTR_4g064897 | 38.788 | 165 | 84 | 4 | 10 | 164 | 12 | 169 | 1.95e-34 | 121 |
MS.gene47818.t1 | MTR_1g068740 | 36.098 | 205 | 110 | 6 | 10 | 199 | 15 | 213 | 5.11e-34 | 120 |
MS.gene47818.t1 | MTR_2g014990 | 37.563 | 197 | 95 | 7 | 10 | 186 | 13 | 201 | 7.08e-34 | 120 |
MS.gene47818.t1 | MTR_5g013900 | 35.784 | 204 | 108 | 4 | 12 | 199 | 11 | 207 | 9.15e-34 | 119 |
MS.gene47818.t1 | MTR_3g069510 | 38.788 | 165 | 84 | 4 | 10 | 164 | 12 | 169 | 9.52e-34 | 120 |
MS.gene47818.t1 | MTR_1g068730 | 35.610 | 205 | 111 | 6 | 10 | 199 | 15 | 213 | 1.39e-33 | 119 |
MS.gene47818.t1 | MTR_1663s0010 | 70.667 | 75 | 22 | 0 | 102 | 176 | 1 | 75 | 1.54e-33 | 115 |
MS.gene47818.t1 | MTR_4g088090 | 36.548 | 197 | 97 | 7 | 10 | 186 | 13 | 201 | 2.09e-33 | 119 |
MS.gene47818.t1 | MTR_4g079350 | 39.286 | 168 | 84 | 5 | 10 | 166 | 13 | 173 | 2.74e-33 | 119 |
MS.gene47818.t1 | MTR_2g096550 | 37.097 | 186 | 102 | 5 | 1 | 176 | 6 | 186 | 6.50e-33 | 117 |
MS.gene47818.t1 | MTR_1g115325 | 35.437 | 206 | 109 | 5 | 10 | 197 | 15 | 214 | 1.28e-32 | 117 |
MS.gene47818.t1 | MTR_8g006970 | 39.011 | 182 | 93 | 5 | 10 | 181 | 8 | 181 | 1.71e-32 | 115 |
MS.gene47818.t1 | MTR_7g100020 | 39.286 | 168 | 86 | 4 | 10 | 167 | 15 | 176 | 3.19e-32 | 115 |
MS.gene47818.t1 | MTR_1g052475 | 37.037 | 189 | 102 | 5 | 10 | 188 | 15 | 196 | 8.21e-32 | 115 |
MS.gene47818.t1 | MTR_8g090215 | 36.765 | 204 | 106 | 5 | 12 | 199 | 11 | 207 | 1.52e-31 | 114 |
MS.gene47818.t1 | MTR_3g087160 | 35.784 | 204 | 107 | 5 | 12 | 199 | 11 | 206 | 1.65e-31 | 114 |
MS.gene47818.t1 | MTR_7g405790 | 35.393 | 178 | 98 | 4 | 10 | 177 | 15 | 185 | 4.23e-31 | 113 |
MS.gene47818.t1 | MTR_4g099470 | 38.418 | 177 | 97 | 6 | 25 | 197 | 8 | 176 | 4.78e-31 | 112 |
MS.gene47818.t1 | MTR_2g075950 | 33.493 | 209 | 111 | 6 | 10 | 197 | 13 | 214 | 5.90e-31 | 112 |
MS.gene47818.t1 | MTR_4g098950 | 34.975 | 203 | 110 | 4 | 12 | 199 | 11 | 206 | 6.45e-31 | 112 |
MS.gene47818.t1 | MTR_2g090865 | 38.462 | 169 | 84 | 6 | 10 | 166 | 11 | 171 | 2.49e-30 | 111 |
MS.gene47818.t1 | MTR_8g036220 | 38.889 | 162 | 82 | 4 | 10 | 161 | 16 | 170 | 2.53e-30 | 111 |
MS.gene47818.t1 | MTR_1686s0010 | 67.647 | 68 | 22 | 0 | 32 | 99 | 13 | 80 | 4.11e-30 | 106 |
MS.gene47818.t1 | MTR_7g051940 | 35.465 | 172 | 94 | 4 | 10 | 171 | 13 | 177 | 5.20e-30 | 110 |
MS.gene47818.t1 | MTR_6g079550 | 38.095 | 168 | 86 | 5 | 10 | 166 | 12 | 172 | 1.44e-29 | 109 |
MS.gene47818.t1 | MTR_4g063160 | 35.266 | 207 | 109 | 7 | 10 | 197 | 15 | 215 | 2.43e-29 | 108 |
MS.gene47818.t1 | MTR_3g064390 | 33.514 | 185 | 106 | 4 | 1 | 175 | 1 | 178 | 3.09e-29 | 107 |
MS.gene47818.t1 | MTR_6g021790 | 36.628 | 172 | 92 | 4 | 10 | 171 | 6 | 170 | 4.18e-29 | 107 |
MS.gene47818.t1 | MTR_5g076590 | 33.514 | 185 | 106 | 4 | 1 | 175 | 1 | 178 | 4.21e-29 | 107 |
MS.gene47818.t1 | MTR_2g083860 | 37.654 | 162 | 84 | 4 | 10 | 161 | 13 | 167 | 5.17e-29 | 107 |
MS.gene47818.t1 | MTR_8g103550 | 33.696 | 184 | 105 | 4 | 3 | 176 | 2 | 178 | 9.13e-29 | 106 |
MS.gene47818.t1 | MTR_8g089985 | 33.721 | 172 | 97 | 4 | 3 | 164 | 10 | 174 | 1.01e-28 | 107 |
MS.gene47818.t1 | MTR_3g086980 | 36.364 | 165 | 88 | 4 | 10 | 164 | 16 | 173 | 1.01e-28 | 107 |
MS.gene47818.t1 | MTR_0262s0050 | 37.576 | 165 | 86 | 4 | 10 | 164 | 15 | 172 | 1.14e-28 | 107 |
MS.gene47818.t1 | MTR_1g078200 | 35.928 | 167 | 90 | 5 | 10 | 166 | 14 | 173 | 2.05e-28 | 106 |
MS.gene47818.t1 | MTR_8g093740 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 2.87e-28 | 105 |
MS.gene47818.t1 | MTR_8g031680 | 37.430 | 179 | 92 | 5 | 3 | 171 | 2 | 170 | 7.38e-28 | 104 |
MS.gene47818.t1 | MTR_8g107070 | 38.272 | 162 | 83 | 4 | 10 | 161 | 14 | 168 | 8.44e-28 | 105 |
MS.gene47818.t1 | MTR_2g027660 | 37.037 | 162 | 85 | 4 | 10 | 161 | 6 | 160 | 2.22e-27 | 103 |
MS.gene47818.t1 | MTR_8g027220 | 36.420 | 162 | 86 | 4 | 10 | 161 | 26 | 180 | 5.67e-27 | 102 |
MS.gene47818.t1 | MTR_1812s0010 | 60.274 | 73 | 29 | 0 | 103 | 175 | 2 | 74 | 1.50e-26 | 97.1 |
MS.gene47818.t1 | MTR_2g093510 | 79.104 | 67 | 14 | 0 | 111 | 177 | 761 | 827 | 2.68e-26 | 105 |
MS.gene47818.t1 | MTR_1g029450 | 34.328 | 201 | 98 | 6 | 10 | 182 | 17 | 211 | 2.79e-26 | 100 |
MS.gene47818.t1 | MTR_8g031870 | 35.152 | 165 | 90 | 4 | 7 | 161 | 3 | 160 | 3.08e-26 | 99.8 |
MS.gene47818.t1 | MTR_8g031660 | 36.686 | 169 | 87 | 5 | 3 | 161 | 2 | 160 | 1.35e-25 | 98.6 |
MS.gene47818.t1 | MTR_1g062760 | 38.272 | 162 | 84 | 5 | 11 | 162 | 15 | 170 | 3.00e-25 | 97.8 |
MS.gene47818.t1 | MTR_7g117910 | 36.486 | 148 | 76 | 4 | 10 | 147 | 20 | 159 | 3.80e-25 | 97.4 |
MS.gene47818.t1 | MTR_3g096350 | 36.810 | 163 | 87 | 5 | 10 | 162 | 12 | 168 | 7.21e-25 | 96.7 |
MS.gene47818.t1 | MTR_7g103070 | 38.889 | 162 | 82 | 6 | 12 | 162 | 18 | 173 | 8.26e-25 | 96.7 |
MS.gene47818.t1 | MTR_1g068730 | 39.837 | 123 | 60 | 2 | 10 | 122 | 15 | 133 | 1.00e-24 | 95.5 |
MS.gene47818.t1 | MTR_1g090717 | 37.427 | 171 | 89 | 5 | 11 | 169 | 16 | 180 | 1.05e-24 | 96.3 |
MS.gene47818.t1 | MTR_1g094220 | 31.868 | 182 | 106 | 5 | 7 | 177 | 28 | 202 | 1.06e-24 | 96.3 |
MS.gene47818.t1 | MTR_1g068740 | 39.837 | 123 | 60 | 2 | 10 | 122 | 15 | 133 | 1.37e-24 | 95.9 |
MS.gene47818.t1 | MTR_1g094220 | 32.749 | 171 | 97 | 5 | 7 | 166 | 28 | 191 | 2.10e-24 | 95.5 |
MS.gene47818.t1 | MTR_2g102060 | 31.579 | 190 | 113 | 4 | 12 | 191 | 12 | 194 | 3.19e-24 | 94.7 |
MS.gene47818.t1 | MTR_1g094220 | 31.282 | 195 | 107 | 8 | 7 | 188 | 28 | 208 | 4.16e-23 | 92.8 |
MS.gene47818.t1 | MTR_8g031830 | 34.568 | 162 | 89 | 4 | 7 | 158 | 3 | 157 | 5.88e-23 | 91.7 |
MS.gene47818.t1 | MTR_1g094220 | 32.143 | 168 | 96 | 5 | 7 | 163 | 28 | 188 | 6.00e-23 | 91.7 |
MS.gene47818.t1 | MTR_3g064390 | 35.606 | 132 | 71 | 2 | 1 | 122 | 1 | 128 | 1.36e-22 | 89.4 |
MS.gene47818.t1 | MTR_8g093740 | 39.098 | 133 | 74 | 4 | 31 | 162 | 10 | 136 | 1.01e-21 | 87.8 |
MS.gene47818.t1 | MTR_3g096350 | 38.843 | 121 | 61 | 3 | 10 | 120 | 12 | 129 | 4.19e-21 | 85.5 |
MS.gene47818.t1 | MTR_3g096350 | 38.843 | 121 | 61 | 3 | 10 | 120 | 12 | 129 | 6.30e-21 | 85.1 |
MS.gene47818.t1 | MTR_5g036990 | 47.561 | 82 | 41 | 2 | 19 | 99 | 21 | 101 | 2.29e-18 | 77.4 |
MS.gene47818.t1 | MTR_3g107713 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.47e-17 | 77.8 |
MS.gene47818.t1 | MTR_3g107717 | 30.435 | 161 | 92 | 4 | 11 | 161 | 14 | 164 | 1.52e-17 | 77.8 |
MS.gene47818.t1 | MTR_3g107707 | 30.435 | 161 | 92 | 4 | 11 | 161 | 14 | 164 | 1.55e-17 | 77.8 |
MS.gene47818.t1 | MTR_6g087980 | 29.469 | 207 | 114 | 7 | 10 | 198 | 6 | 198 | 3.19e-17 | 76.6 |
MS.gene47818.t1 | MTR_4g113620 | 29.775 | 178 | 100 | 6 | 11 | 180 | 14 | 174 | 3.78e-17 | 76.6 |
MS.gene47818.t1 | MTR_7g103070 | 40.870 | 115 | 61 | 5 | 49 | 162 | 9 | 117 | 1.75e-16 | 73.6 |
MS.gene47818.t1 | MTR_4g088055 | 29.775 | 178 | 102 | 6 | 10 | 169 | 6 | 178 | 7.20e-15 | 70.1 |
MS.gene47818.t1 | MTR_2g090875 | 29.213 | 178 | 103 | 6 | 10 | 169 | 6 | 178 | 3.79e-14 | 68.2 |
MS.gene47818.t1 | MTR_5g022600 | 29.213 | 178 | 103 | 7 | 10 | 169 | 6 | 178 | 1.36e-13 | 66.6 |
MS.gene47818.t1 | MTR_8g075240 | 29.775 | 178 | 102 | 7 | 10 | 169 | 6 | 178 | 2.69e-13 | 65.9 |
MS.gene47818.t1 | MTR_4g073250 | 27.568 | 185 | 111 | 6 | 10 | 176 | 6 | 185 | 7.71e-13 | 64.7 |
MS.gene47818.t1 | MTR_3g078260 | 29.255 | 188 | 108 | 6 | 1 | 170 | 1 | 181 | 1.77e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47818.t1 | AT1G52280 | 85.922 | 206 | 18 | 2 | 4 | 199 | 2 | 206 | 4.66e-130 | 364 |
MS.gene47818.t1 | AT3G16100 | 84.390 | 205 | 21 | 2 | 5 | 199 | 3 | 206 | 1.27e-127 | 358 |
MS.gene47818.t1 | AT3G18820 | 83.902 | 205 | 22 | 2 | 5 | 199 | 3 | 206 | 6.50e-123 | 346 |
MS.gene47818.t1 | AT1G49300 | 80.976 | 205 | 28 | 2 | 5 | 199 | 3 | 206 | 5.34e-119 | 336 |
MS.gene47818.t1 | AT1G49300 | 80.976 | 205 | 28 | 2 | 5 | 199 | 3 | 206 | 5.34e-119 | 336 |
MS.gene47818.t1 | AT1G22740 | 69.417 | 206 | 47 | 4 | 5 | 199 | 3 | 203 | 3.61e-99 | 286 |
MS.gene47818.t1 | AT4G09720 | 65.865 | 208 | 54 | 3 | 5 | 199 | 3 | 206 | 2.46e-97 | 281 |
MS.gene47818.t1 | AT4G09720 | 62.557 | 219 | 54 | 4 | 5 | 199 | 3 | 217 | 8.40e-94 | 273 |
MS.gene47818.t1 | AT4G09720 | 63.850 | 213 | 55 | 4 | 5 | 199 | 3 | 211 | 1.05e-93 | 272 |
MS.gene47818.t1 | AT2G21880 | 67.222 | 180 | 49 | 1 | 6 | 175 | 5 | 184 | 1.07e-85 | 252 |
MS.gene47818.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 4.42e-82 | 241 |
MS.gene47818.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 4.42e-82 | 241 |
MS.gene47818.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 4.42e-82 | 241 |
MS.gene47818.t1 | AT2G21880 | 62.778 | 180 | 49 | 2 | 6 | 175 | 5 | 176 | 6.49e-76 | 227 |
MS.gene47818.t1 | AT2G21880 | 65.409 | 159 | 45 | 1 | 27 | 175 | 1 | 159 | 2.57e-72 | 217 |
MS.gene47818.t1 | AT2G21880 | 65.409 | 159 | 45 | 1 | 27 | 175 | 1 | 159 | 2.57e-72 | 217 |
MS.gene47818.t1 | AT5G39620 | 56.977 | 172 | 64 | 1 | 11 | 172 | 6 | 177 | 8.32e-67 | 204 |
MS.gene47818.t1 | AT1G28550 | 35.714 | 210 | 106 | 6 | 10 | 197 | 13 | 215 | 3.37e-36 | 126 |
MS.gene47818.t1 | AT1G09630 | 40.606 | 165 | 81 | 4 | 10 | 164 | 12 | 169 | 1.60e-35 | 124 |
MS.gene47818.t1 | AT4G17530 | 38.308 | 201 | 103 | 6 | 10 | 197 | 8 | 200 | 1.90e-35 | 124 |
MS.gene47818.t1 | AT5G47200 | 38.308 | 201 | 103 | 6 | 10 | 197 | 8 | 200 | 2.86e-35 | 123 |
MS.gene47818.t1 | AT1G02130 | 35.821 | 201 | 109 | 5 | 10 | 197 | 8 | 201 | 6.05e-34 | 120 |
MS.gene47818.t1 | AT2G33870 | 36.548 | 197 | 98 | 6 | 10 | 186 | 13 | 202 | 6.14e-34 | 120 |
MS.gene47818.t1 | AT2G44610 | 36.098 | 205 | 107 | 4 | 12 | 199 | 11 | 208 | 7.20e-34 | 120 |
MS.gene47818.t1 | AT5G59840 | 36.408 | 206 | 107 | 6 | 10 | 197 | 15 | 214 | 7.30e-34 | 120 |
MS.gene47818.t1 | AT5G60860 | 40.741 | 162 | 79 | 4 | 10 | 161 | 13 | 167 | 9.70e-34 | 120 |
MS.gene47818.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 1.62e-33 | 119 |
MS.gene47818.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 1.62e-33 | 119 |
MS.gene47818.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 1.62e-33 | 119 |
MS.gene47818.t1 | AT3G15060 | 39.877 | 163 | 81 | 4 | 9 | 161 | 12 | 167 | 1.68e-33 | 119 |
MS.gene47818.t1 | AT5G45750 | 34.928 | 209 | 107 | 7 | 10 | 197 | 13 | 213 | 6.82e-33 | 117 |
MS.gene47818.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 8.92e-33 | 117 |
MS.gene47818.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 8.92e-33 | 117 |
MS.gene47818.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 8.92e-33 | 117 |
MS.gene47818.t1 | AT5G59150 | 36.970 | 165 | 87 | 4 | 10 | 164 | 12 | 169 | 1.74e-32 | 116 |
MS.gene47818.t1 | AT3G11730 | 36.139 | 202 | 108 | 5 | 10 | 197 | 8 | 202 | 2.34e-32 | 116 |
MS.gene47818.t1 | AT1G05810 | 35.165 | 182 | 101 | 4 | 6 | 177 | 8 | 182 | 3.19e-32 | 116 |
MS.gene47818.t1 | AT1G07410 | 36.970 | 165 | 87 | 4 | 10 | 164 | 12 | 169 | 4.06e-32 | 115 |
MS.gene47818.t1 | AT3G46830 | 37.576 | 165 | 86 | 4 | 10 | 164 | 12 | 169 | 4.57e-32 | 115 |
MS.gene47818.t1 | AT3G46830 | 37.576 | 165 | 86 | 4 | 10 | 164 | 12 | 169 | 4.57e-32 | 115 |
MS.gene47818.t1 | AT1G05810 | 35.165 | 182 | 101 | 4 | 6 | 177 | 54 | 228 | 6.80e-32 | 116 |
MS.gene47818.t1 | AT5G03520 | 40.476 | 168 | 84 | 4 | 10 | 167 | 15 | 176 | 8.30e-32 | 115 |
MS.gene47818.t1 | AT2G31680 | 34.831 | 178 | 99 | 4 | 10 | 177 | 12 | 182 | 1.06e-31 | 114 |
MS.gene47818.t1 | AT5G64990 | 37.619 | 210 | 97 | 7 | 12 | 199 | 9 | 206 | 5.63e-31 | 112 |
MS.gene47818.t1 | AT3G12160 | 38.788 | 165 | 84 | 4 | 10 | 164 | 15 | 172 | 6.62e-31 | 112 |
MS.gene47818.t1 | AT3G09900 | 41.071 | 168 | 83 | 5 | 10 | 167 | 15 | 176 | 7.12e-31 | 112 |
MS.gene47818.t1 | AT4G18430 | 32.381 | 210 | 112 | 8 | 10 | 197 | 13 | 214 | 7.99e-31 | 112 |
MS.gene47818.t1 | AT1G18200 | 39.506 | 162 | 81 | 4 | 10 | 161 | 13 | 167 | 8.27e-31 | 112 |
MS.gene47818.t1 | AT2G43130 | 34.831 | 178 | 99 | 4 | 10 | 177 | 12 | 182 | 1.15e-30 | 112 |
MS.gene47818.t1 | AT1G06400 | 35.025 | 197 | 103 | 6 | 10 | 196 | 13 | 194 | 1.17e-30 | 112 |
MS.gene47818.t1 | AT5G47960 | 33.491 | 212 | 110 | 6 | 10 | 197 | 15 | 219 | 1.87e-30 | 111 |
MS.gene47818.t1 | AT4G18800 | 38.095 | 168 | 86 | 5 | 10 | 166 | 13 | 173 | 2.19e-30 | 111 |
MS.gene47818.t1 | AT5G45130 | 35.135 | 185 | 103 | 4 | 1 | 175 | 1 | 178 | 2.81e-30 | 110 |
MS.gene47818.t1 | AT1G16920 | 38.095 | 168 | 86 | 6 | 10 | 166 | 13 | 173 | 4.61e-30 | 110 |
MS.gene47818.t1 | AT5G10260 | 35.122 | 205 | 108 | 5 | 12 | 199 | 11 | 207 | 5.31e-30 | 110 |
MS.gene47818.t1 | AT4G35860 | 37.209 | 172 | 91 | 4 | 10 | 171 | 6 | 170 | 1.31e-29 | 109 |
MS.gene47818.t1 | AT4G39990 | 36.364 | 165 | 88 | 4 | 10 | 164 | 17 | 174 | 2.03e-29 | 108 |
MS.gene47818.t1 | AT1G73640 | 38.272 | 162 | 83 | 4 | 10 | 161 | 13 | 167 | 2.19e-29 | 109 |
MS.gene47818.t1 | AT4G19640 | 34.054 | 185 | 105 | 4 | 1 | 175 | 1 | 178 | 4.70e-29 | 107 |
MS.gene47818.t1 | AT5G47520 | 35.928 | 167 | 90 | 4 | 10 | 166 | 14 | 173 | 4.74e-29 | 108 |
MS.gene47818.t1 | AT3G07410 | 34.884 | 172 | 95 | 4 | 10 | 171 | 12 | 176 | 5.51e-29 | 107 |
MS.gene47818.t1 | AT4G39890 | 37.805 | 164 | 86 | 3 | 11 | 164 | 10 | 167 | 7.14e-29 | 107 |
MS.gene47818.t1 | AT5G65270 | 34.545 | 165 | 91 | 4 | 10 | 164 | 17 | 174 | 2.23e-28 | 106 |
MS.gene47818.t1 | AT5G64990 | 36.406 | 217 | 97 | 8 | 12 | 199 | 9 | 213 | 2.57e-28 | 105 |
MS.gene47818.t1 | AT4G17160 | 37.888 | 161 | 83 | 4 | 11 | 161 | 7 | 160 | 3.65e-28 | 105 |
MS.gene47818.t1 | AT2G22290 | 33.981 | 206 | 109 | 5 | 12 | 199 | 11 | 207 | 1.42e-27 | 103 |
MS.gene47818.t1 | AT5G45130 | 35.465 | 172 | 94 | 4 | 14 | 175 | 22 | 186 | 1.68e-27 | 103 |
MS.gene47818.t1 | AT4G17170 | 37.037 | 162 | 85 | 4 | 10 | 161 | 6 | 160 | 1.90e-27 | 103 |
MS.gene47818.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 8.37e-27 | 102 |
MS.gene47818.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 8.37e-27 | 102 |
MS.gene47818.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 8.37e-27 | 102 |
MS.gene47818.t1 | AT5G03530 | 36.082 | 194 | 90 | 7 | 11 | 176 | 14 | 201 | 2.32e-26 | 100 |
MS.gene47818.t1 | AT5G03530 | 36.082 | 194 | 90 | 7 | 11 | 176 | 14 | 201 | 2.32e-26 | 100 |
MS.gene47818.t1 | AT1G01200 | 35.185 | 162 | 89 | 3 | 10 | 161 | 28 | 183 | 8.70e-26 | 100 |
MS.gene47818.t1 | AT3G54840 | 33.333 | 168 | 94 | 5 | 7 | 163 | 30 | 190 | 2.25e-25 | 97.8 |
MS.gene47818.t1 | AT3G54840 | 32.584 | 178 | 102 | 5 | 7 | 173 | 30 | 200 | 5.21e-25 | 97.1 |
MS.gene47818.t1 | AT5G03520 | 41.667 | 132 | 71 | 3 | 36 | 167 | 41 | 166 | 5.48e-25 | 97.1 |
MS.gene47818.t1 | AT3G54840 | 33.140 | 172 | 97 | 5 | 13 | 173 | 2 | 166 | 2.93e-24 | 94.4 |
MS.gene47818.t1 | AT4G19640 | 35.135 | 148 | 81 | 3 | 1 | 138 | 1 | 143 | 3.81e-24 | 93.2 |
MS.gene47818.t1 | AT4G19640 | 36.641 | 131 | 69 | 2 | 1 | 121 | 1 | 127 | 9.25e-23 | 90.9 |
MS.gene47818.t1 | AT5G59150 | 37.398 | 123 | 70 | 3 | 42 | 164 | 3 | 118 | 6.02e-22 | 88.2 |
MS.gene47818.t1 | AT3G09910 | 35.088 | 171 | 95 | 5 | 11 | 171 | 14 | 178 | 1.05e-21 | 88.2 |
MS.gene47818.t1 | AT3G09910 | 35.088 | 171 | 95 | 5 | 11 | 171 | 14 | 178 | 1.05e-21 | 88.2 |
MS.gene47818.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.79e-21 | 87.8 |
MS.gene47818.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.79e-21 | 87.8 |
MS.gene47818.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.79e-21 | 87.8 |
MS.gene47818.t1 | AT4G35860 | 36.923 | 130 | 75 | 3 | 42 | 171 | 2 | 124 | 6.16e-21 | 85.5 |
MS.gene47818.t1 | AT5G20020 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.56e-17 | 77.8 |
MS.gene47818.t1 | AT5G55190 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.64e-17 | 77.8 |
MS.gene47818.t1 | AT5G20010 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.68e-17 | 77.8 |
MS.gene47818.t1 | AT5G55080 | 29.193 | 161 | 94 | 4 | 11 | 161 | 14 | 164 | 2.58e-17 | 77.4 |
MS.gene47818.t1 | AT4G28950 | 30.435 | 184 | 107 | 6 | 10 | 177 | 6 | 184 | 1.10e-16 | 75.5 |
MS.gene47818.t1 | AT5G45970 | 28.492 | 179 | 105 | 6 | 10 | 170 | 6 | 179 | 3.97e-14 | 68.2 |
MS.gene47818.t1 | AT4G35020 | 29.050 | 179 | 104 | 6 | 10 | 170 | 6 | 179 | 5.34e-13 | 65.1 |
MS.gene47818.t1 | AT4G35020 | 29.050 | 179 | 104 | 6 | 10 | 170 | 6 | 179 | 5.34e-13 | 65.1 |
MS.gene47818.t1 | AT4G35020 | 29.050 | 179 | 104 | 6 | 10 | 170 | 6 | 179 | 5.34e-13 | 65.1 |
MS.gene47818.t1 | AT5G62880 | 29.787 | 188 | 107 | 6 | 1 | 170 | 1 | 181 | 6.95e-13 | 65.1 |
MS.gene47818.t1 | AT2G44690 | 28.655 | 171 | 99 | 6 | 10 | 162 | 18 | 183 | 7.97e-13 | 65.1 |
MS.gene47818.t1 | AT1G20090 | 28.090 | 178 | 105 | 6 | 10 | 169 | 5 | 177 | 8.06e-13 | 64.7 |
MS.gene47818.t1 | AT3G48040 | 29.787 | 188 | 107 | 6 | 1 | 170 | 1 | 181 | 8.88e-13 | 64.7 |
MS.gene47818.t1 | AT1G75840 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.59e-12 | 63.9 |
MS.gene47818.t1 | AT3G51300 | 28.652 | 178 | 104 | 6 | 10 | 169 | 6 | 178 | 1.67e-12 | 63.9 |
MS.gene47818.t1 | AT5G09910 | 24.855 | 173 | 91 | 5 | 11 | 146 | 23 | 193 | 5.43e-12 | 63.9 |
MS.gene47818.t1 | AT5G09910 | 24.855 | 173 | 91 | 5 | 11 | 146 | 23 | 193 | 5.43e-12 | 63.9 |
MS.gene47818.t1 | AT2G17800 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.07e-11 | 61.6 |
MS.gene47818.t1 | AT2G17800 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.07e-11 | 61.6 |
MS.gene47818.t1 | AT4G35950 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.30e-11 | 61.2 |
MS.gene47818.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 1.82e-11 | 62.4 |
MS.gene47818.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 1.82e-11 | 62.4 |
MS.gene47818.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 1.82e-11 | 62.4 |
Find 53 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACCGACATCAATTGTTTC+TGG | 0.232108 | 2.1:-3354589 | None:intergenic |
AAAACTCACAATTCTTCTTC+AGG | 0.319718 | 2.1:-3354232 | None:intergenic |
GCGAGAAGAGTTCCTTATTC+AGG | 0.320875 | 2.1:+3353765 | MS.gene47818:CDS |
TTGTTTCCCAACACCACAAA+TGG | 0.348208 | 2.1:-3353902 | None:intergenic |
ACTCTTCTCGCCAGTGGTTA+AGG | 0.372983 | 2.1:-3353753 | None:intergenic |
TCCTGAAAACTTCCCATTTG+TGG | 0.376974 | 2.1:+3353889 | MS.gene47818:CDS |
AGACAGGTTGTTCACATTGC+AGG | 0.381648 | 2.1:+3352276 | MS.gene47818:CDS |
TTTGCAGAGGTCTCAAAGTA+TGG | 0.397953 | 2.1:-3354148 | None:intergenic |
AACTTCCCATTTGTGGTGTT+GGG | 0.400986 | 2.1:+3353896 | MS.gene47818:CDS |
GTCTTCAACTTGAACTTCCT+TGG | 0.413731 | 2.1:-3352257 | None:intergenic |
GTCATCATCCTCGGTGATAG+TGG | 0.414536 | 2.1:+3352001 | MS.gene47818:CDS |
ACAATTGATGTCGGTGGCGG+TGG | 0.446109 | 2.1:+3354595 | MS.gene47818:CDS |
CAACTTGAACTTCCTTGGTA+AGG | 0.448202 | 2.1:-3352252 | None:intergenic |
AAAGGCATGGTGTGCTTCCA+AGG | 0.464084 | 2.1:+3354117 | MS.gene47818:CDS |
GATCTGGGATACTGCTGGTC+AGG | 0.467671 | 2.1:+3353639 | MS.gene47818:intron |
CAGGAGAGGTTTCAAAGTCT+TGG | 0.475629 | 2.1:+3353658 | MS.gene47818:CDS |
AAACTTCCCATTTGTGGTGT+TGG | 0.495054 | 2.1:+3353895 | MS.gene47818:CDS |
GGAAACAAAGTAGATGTTGA+TGG | 0.512592 | 2.1:+3353917 | MS.gene47818:CDS |
CTTTGAGACCTCTGCAAAGG+AGG | 0.516360 | 2.1:+3354153 | MS.gene47818:CDS |
AAAGTATGGTATATTCCCCT+TGG | 0.522925 | 2.1:-3354134 | None:intergenic |
AGGAAGTTCAAGTTGAAGAC+AGG | 0.529226 | 2.1:+3352260 | MS.gene47818:CDS |
GGACGGCAACAGAGGTCACC+AGG | 0.534201 | 2.1:+3354616 | MS.gene47818:CDS |
TGTTTCCCAACACCACAAAT+GGG | 0.537488 | 2.1:-3353901 | None:intergenic |
TTGATGTCGGTGGCGGTGGA+CGG | 0.543988 | 2.1:+3354599 | MS.gene47818:CDS |
TTGCAGATCTGGGATACTGC+TGG | 0.559169 | 2.1:+3353634 | MS.gene47818:intron |
GCGGCGAGAATGAGAAGCCA+TGG | 0.559756 | 2.1:-3351963 | None:intergenic |
GAAACAATTGATGTCGGTGG+CGG | 0.576334 | 2.1:+3354592 | MS.gene47818:CDS |
GAGGTTTCAAAGTCTTGGTG+TGG | 0.576541 | 2.1:+3353663 | MS.gene47818:CDS |
CTTGGTGTGGCTTTCTACCG+AGG | 0.578330 | 2.1:+3353676 | MS.gene47818:CDS |
AATCAGTATAAGGCTACCAT+TGG | 0.580849 | 2.1:+3352220 | MS.gene47818:intron |
TTTGAGACCTCTGCAAAGGA+GGG | 0.585589 | 2.1:+3354154 | MS.gene47818:CDS |
AAGGCATGGTGTGCTTCCAA+GGG | 0.586547 | 2.1:+3354118 | MS.gene47818:CDS |
GGTAAGGAAATCAGCACCAA+TGG | 0.599639 | 2.1:-3352236 | None:intergenic |
TCTTATCAACATTCACAGCC+TGG | 0.599998 | 2.1:-3354634 | None:intergenic |
AACAAAGTAGATGTTGATGG+TGG | 0.603728 | 2.1:+3353920 | MS.gene47818:CDS |
GTGGCGGTGGACGGCAACAG+AGG | 0.605632 | 2.1:+3354608 | MS.gene47818:CDS |
CTGAGAAGAAAGCAAAGGCA+TGG | 0.611252 | 2.1:+3354104 | MS.gene47818:CDS |
TAAGGAACTCTTCTCGCCAG+TGG | 0.617763 | 2.1:-3353759 | None:intergenic |
TCATCATCCTCGGTGATAGT+GGG | 0.618638 | 2.1:+3352002 | MS.gene47818:CDS |
TTATTGAAAGTCATCATCCT+CGG | 0.622878 | 2.1:+3351992 | MS.gene47818:CDS |
CCAGAAACAATTGATGTCGG+TGG | 0.629506 | 2.1:+3354589 | MS.gene47818:CDS |
GGGATACTGCTGGTCAGGAG+AGG | 0.630015 | 2.1:+3353644 | MS.gene47818:CDS |
TGGTGCTGATTTCCTTACCA+AGG | 0.632236 | 2.1:+3352240 | MS.gene47818:CDS |
GGTTTCTGAGAAGAAAGCAA+AGG | 0.639361 | 2.1:+3354099 | MS.gene47818:intron |
ATTAAAACCCTCCTTTGCAG+AGG | 0.646100 | 2.1:-3354161 | None:intergenic |
ATACTTTGAGACCTCTGCAA+AGG | 0.653339 | 2.1:+3354150 | MS.gene47818:CDS |
ATGCCAGAAACAATTGATGT+CGG | 0.654391 | 2.1:+3354586 | MS.gene47818:CDS |
TGACATTTACATCATAAACA+AGG | 0.673979 | 2.1:-3353714 | None:intergenic |
TGATGACTTTCAATAACATG+CGG | 0.690006 | 2.1:-3351985 | None:intergenic |
GGACACAGCAATCTGCACCT+CGG | 0.707086 | 2.1:-3353693 | None:intergenic |
AGGCATGGTGTGCTTCCAAG+GGG | 0.713588 | 2.1:+3354119 | MS.gene47818:CDS |
TGACTTTCAATAACATGCGG+CGG | 0.715122 | 2.1:-3351982 | None:intergenic |
TTATATACCCACTATCACCG+AGG | 0.799645 | 2.1:-3352009 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAATAAATAAATAATTGA+AGG | + | chr2.1:3353277-3353296 | MS.gene47818:intron | 10.0% |
!! | AATTATGTATGTAATATGAA+AGG | + | chr2.1:3353517-3353536 | MS.gene47818:intron | 15.0% |
!! | ATTATGTATGTAATATGAAA+GGG | + | chr2.1:3353518-3353537 | MS.gene47818:intron | 15.0% |
!! | TTCATATTACATACATAATT+AGG | - | chr2.1:3353517-3353536 | None:intergenic | 15.0% |
!!! | AATCTTATTTTAATATAGAG+TGG | + | chr2.1:3354389-3354408 | MS.gene47818:intron | 15.0% |
!!! | CAAAAAAAAAAAAGTTTTGT+TGG | + | chr2.1:3354319-3354338 | MS.gene47818:intron | 15.0% |
!! | AAAGTTTAGTAATCAGTATA+AGG | + | chr2.1:3352210-3352229 | MS.gene47818:intron | 20.0% |
!! | CTACATGTTAAATGTTAATA+GGG | - | chr2.1:3352752-3352771 | None:intergenic | 20.0% |
!! | TTAGAATATTAAAGATGGTA+GGG | + | chr2.1:3354348-3354367 | MS.gene47818:intron | 20.0% |
!!! | AAAAAAAAAGTTTTGTTGGT+AGG | + | chr2.1:3354323-3354342 | MS.gene47818:intron | 20.0% |
!!! | ACCTAATTGATTTGATTTTT+AGG | + | chr2.1:3353853-3353872 | MS.gene47818:intron | 20.0% |
!!! | AGGATTTAGAATATTAAAGA+TGG | + | chr2.1:3354343-3354362 | MS.gene47818:intron | 20.0% |
!!! | ATATATTTTGACATTGAGAA+TGG | - | chr2.1:3352723-3352742 | None:intergenic | 20.0% |
!!! | ATTACTATCAGCTTTTAAAT+AGG | - | chr2.1:3352838-3352857 | None:intergenic | 20.0% |
!!! | GAATTCTGAAAAATAATTTG+AGG | - | chr2.1:3353974-3353993 | None:intergenic | 20.0% |
!!! | TTATTTTTATTTGTTTGGCA+GGG | + | chr2.1:3352150-3352169 | MS.gene47818:intron | 20.0% |
!!! | TTTAGAATATTAAAGATGGT+AGG | + | chr2.1:3354347-3354366 | MS.gene47818:intron | 20.0% |
!!! | TTTATTTTTATTTGTTTGGC+AGG | + | chr2.1:3352149-3352168 | MS.gene47818:intron | 20.0% |
! | AAAGAGCAAAACTTCTTAAA+TGG | - | chr2.1:3354299-3354318 | None:intergenic | 25.0% |
! | AATTGAAAAGGAAAAGGAAA+AGG | - | chr2.1:3352054-3352073 | None:intergenic | 25.0% |
! | AGGATCAAACAAAATATCTA+TGG | - | chr2.1:3354544-3354563 | None:intergenic | 25.0% |
! | AGTTATACATTCATTCATAG+CGG | - | chr2.1:3354454-3354473 | None:intergenic | 25.0% |
! | AGTTGAAATTGAAAAGGAAA+AGG | - | chr2.1:3352060-3352079 | None:intergenic | 25.0% |
! | AGTTTATACCCAAAAAAACA+GGG | - | chr2.1:3352878-3352897 | None:intergenic | 25.0% |
! | ATCTTAACACAATTTCTGAA+GGG | + | chr2.1:3353814-3353833 | MS.gene47818:intron | 25.0% |
! | GAATAAAAATCACCTGAATA+AGG | - | chr2.1:3353780-3353799 | None:intergenic | 25.0% |
! | GAGATAAATAACTTACAACT+CGG | - | chr2.1:3353952-3353971 | None:intergenic | 25.0% |
! | GATCCATTTAATCAATACAA+TGG | - | chr2.1:3353488-3353507 | None:intergenic | 25.0% |
! | GCCTAAAAATCAAATCAATT+AGG | - | chr2.1:3353857-3353876 | None:intergenic | 25.0% |
! | GCTACATGTTAAATGTTAAT+AGG | - | chr2.1:3352753-3352772 | None:intergenic | 25.0% |
! | TACTTCATAGATACATATCT+AGG | + | chr2.1:3353301-3353320 | MS.gene47818:intron | 25.0% |
! | TAGAATATTAAAGATGGTAG+GGG | + | chr2.1:3354349-3354368 | MS.gene47818:intron | 25.0% |
! | TAGTTTATACCCAAAAAAAC+AGG | - | chr2.1:3352879-3352898 | None:intergenic | 25.0% |
! | TCCTAAAACATGTCATATAT+TGG | - | chr2.1:3352332-3352351 | None:intergenic | 25.0% |
! | TGACATTTACATCATAAACA+AGG | - | chr2.1:3353717-3353736 | None:intergenic | 25.0% |
! | TGATATTCTGACATCAATTT+GGG | - | chr2.1:3352790-3352809 | None:intergenic | 25.0% |
! | TGTGATAGTTGAAATTGAAA+AGG | - | chr2.1:3352066-3352085 | None:intergenic | 25.0% |
! | TTCAACTATCACATGTTAAA+GGG | + | chr2.1:3352073-3352092 | MS.gene47818:intron | 25.0% |
! | TTTCAACTATCACATGTTAA+AGG | + | chr2.1:3352072-3352091 | MS.gene47818:intron | 25.0% |
!! | AAATTCATGTTTCTTTTTCC+TGG | + | chr2.1:3353430-3353449 | MS.gene47818:intron | 25.0% |
!! | AATTAATGTTCGATTCGATT+CGG | + | chr2.1:3352117-3352136 | MS.gene47818:intron | 25.0% |
!! | CTTTTGTCTAAGAAAGATAA+AGG | - | chr2.1:3353087-3353106 | None:intergenic | 25.0% |
!! | TATCAAAAAACAAAGTGTCA+TGG | - | chr2.1:3353336-3353355 | None:intergenic | 25.0% |
!! | TCCAATATATGACATGTTTT+AGG | + | chr2.1:3352328-3352347 | MS.gene47818:intron | 25.0% |
!! | TTCAGGTGATTTTTATTCTT+TGG | + | chr2.1:3353782-3353801 | MS.gene47818:intron | 25.0% |
!! | TTTGATTTACCATATGTTCA+CGG | + | chr2.1:3354034-3354053 | MS.gene47818:intron | 25.0% |
!!! | AGACCATTGTATTGATTAAA+TGG | + | chr2.1:3353482-3353501 | MS.gene47818:intron | 25.0% |
!!! | ATAGATATTTTGTTTGATCC+TGG | + | chr2.1:3354543-3354562 | MS.gene47818:intron | 25.0% |
!!! | GTATAACTTGCTATTTCAAT+TGG | + | chr2.1:3354466-3354485 | MS.gene47818:intron | 25.0% |
AAAACTCACAATTCTTCTTC+AGG | - | chr2.1:3354235-3354254 | None:intergenic | 30.0% | |
AACAAGGTTTAAGAAGCTAT+TGG | + | chr2.1:3353184-3353203 | MS.gene47818:intron | 30.0% | |
ACAAGGTTTAAGAAGCTATT+GGG | + | chr2.1:3353185-3353204 | MS.gene47818:intron | 30.0% | |
ACACTGTCGTAAATTGTAAT+CGG | - | chr2.1:3352640-3352659 | None:intergenic | 30.0% | |
AGAATATTAAAGATGGTAGG+GGG | + | chr2.1:3354350-3354369 | MS.gene47818:intron | 30.0% | |
AGATTCTTGAGCAATATGTT+TGG | - | chr2.1:3353253-3353272 | None:intergenic | 30.0% | |
AGTCTATCAACTACATATGA+TGG | - | chr2.1:3353996-3354015 | None:intergenic | 30.0% | |
CAATATTAAGTGTATGACCT+TGG | - | chr2.1:3352447-3352466 | None:intergenic | 30.0% | |
CATGTCATATATTGGAAACA+CGG | - | chr2.1:3352324-3352343 | None:intergenic | 30.0% | |
CTTAGACAAAAGTCAAATGT+TGG | + | chr2.1:3353095-3353114 | MS.gene47818:intron | 30.0% | |
GACAAATGTTAGTAAGTTAG+CGG | + | chr2.1:3352392-3352411 | MS.gene47818:intron | 30.0% | |
GAGAATGGAAAAAAGAAGTA+TGG | - | chr2.1:3352708-3352727 | None:intergenic | 30.0% | |
GATATCTCTTCAATGTGATT+TGG | - | chr2.1:3353230-3353249 | None:intergenic | 30.0% | |
GATCTTAACACAATTTCTGA+AGG | + | chr2.1:3353813-3353832 | MS.gene47818:intron | 30.0% | |
GATTCTTGAGCAATATGTTT+GGG | - | chr2.1:3353252-3353271 | None:intergenic | 30.0% | |
GTGATATTCTGACATCAATT+TGG | - | chr2.1:3352791-3352810 | None:intergenic | 30.0% | |
TCAATATGTAACCGAATTAG+TGG | + | chr2.1:3352611-3352630 | MS.gene47818:intron | 30.0% | |
TCACTACATGATGAAAAACA+AGG | + | chr2.1:3353168-3353187 | MS.gene47818:intron | 30.0% | |
TGATGACTTTCAATAACATG+CGG | - | chr2.1:3351988-3352007 | None:intergenic | 30.0% | |
TTATTGAAAGTCATCATCCT+CGG | + | chr2.1:3351992-3352011 | MS.gene47818:CDS | 30.0% | |
TTGATTTACCATATGTTCAC+GGG | + | chr2.1:3354035-3354054 | MS.gene47818:intron | 30.0% | |
! | AATTTAATCCTGTGCACTTT+TGG | + | chr2.1:3353128-3353147 | MS.gene47818:intron | 30.0% |
! | GTTTCTTTTTCCTGGATAAA+AGG | + | chr2.1:3353438-3353457 | MS.gene47818:intron | 30.0% |
! | TATCAGCTTTTAAATAGGAC+TGG | - | chr2.1:3352833-3352852 | None:intergenic | 30.0% |
!! | ACAAAAGCATCTTCTAACTT+TGG | + | chr2.1:3352955-3352974 | MS.gene47818:intron | 30.0% |
!!! | GTTTTAGGATCTATAAAGCT+CGG | + | chr2.1:3352343-3352362 | MS.gene47818:intron | 30.0% |
!!! | TTCATCTACCCTGTTTTTTT+GGG | + | chr2.1:3352867-3352886 | MS.gene47818:intron | 30.0% |
!!! | TTCATTCTTGAGAGCATTTT+TGG | - | chr2.1:3354212-3354231 | None:intergenic | 30.0% |
!!! | TTTCATCTACCCTGTTTTTT+TGG | + | chr2.1:3352866-3352885 | MS.gene47818:intron | 30.0% |
AAAGGAAAAGGAAAAGGAGA+AGG | - | chr2.1:3352048-3352067 | None:intergenic | 35.0% | |
AAAGTATGGTATATTCCCCT+TGG | - | chr2.1:3354137-3354156 | None:intergenic | 35.0% | |
AATCAGTATAAGGCTACCAT+TGG | + | chr2.1:3352220-3352239 | MS.gene47818:intron | 35.0% | |
ATCTGTCATAATCAACAACC+AGG | - | chr2.1:3354564-3354583 | None:intergenic | 35.0% | |
ATGCCAGAAACAATTGATGT+CGG | + | chr2.1:3354586-3354605 | MS.gene47818:CDS | 35.0% | |
ATGTAGTGAGAGGAACAAAA+TGG | - | chr2.1:3353157-3353176 | None:intergenic | 35.0% | |
ATTAAGTGTATGACCTTGGT+AGG | - | chr2.1:3352443-3352462 | None:intergenic | 35.0% | |
GAGACAAGAATGTCAAACAT+TGG | - | chr2.1:3353051-3353070 | None:intergenic | 35.0% | |
GGAAACAAAGTAGATGTTGA+TGG | + | chr2.1:3353917-3353936 | MS.gene47818:CDS | 35.0% | |
TGAGATATGATGACATGGTT+GGG | + | chr2.1:3353405-3353424 | MS.gene47818:intron | 35.0% | |
TGATTTACCATATGTTCACG+GGG | + | chr2.1:3354036-3354055 | MS.gene47818:intron | 35.0% | |
TTGAGATATGATGACATGGT+TGG | + | chr2.1:3353404-3353423 | MS.gene47818:intron | 35.0% | |
TTTATGCGCATTGTTAACTG+TGG | + | chr2.1:3354272-3354291 | MS.gene47818:intron | 35.0% | |
! | AACAAAGTAGATGTTGATGG+TGG | + | chr2.1:3353920-3353939 | MS.gene47818:CDS | 35.0% |
! | GTTTCAAGTGATTCTCTTTG+AGG | + | chr2.1:3354500-3354519 | MS.gene47818:intron | 35.0% |
! | GTTTTTCATCATGTAGTGAG+AGG | - | chr2.1:3353167-3353186 | None:intergenic | 35.0% |
! | TTAACACAATTTCTGAAGGG+CGG | + | chr2.1:3353817-3353836 | MS.gene47818:intron | 35.0% |
! | TTTAAATAGGACTGGTGAAG+TGG | - | chr2.1:3352825-3352844 | None:intergenic | 35.0% |
! | TTTTGTGACTAGTGTGAACA+AGG | - | chr2.1:3352941-3352960 | None:intergenic | 35.0% |
!! | AAAGGAGGGTTTTAATGTTG+AGG | + | chr2.1:3354168-3354187 | MS.gene47818:CDS | 35.0% |
!! | CTTTTGAAAACCTTAACCAC+TGG | + | chr2.1:3353743-3353762 | MS.gene47818:CDS | 35.0% |
!! | TTTTATTTGTTTGGCAGGGT+TGG | + | chr2.1:3352154-3352173 | MS.gene47818:intron | 35.0% |
AAACTTCCCATTTGTGGTGT+TGG | + | chr2.1:3353895-3353914 | MS.gene47818:CDS | 40.0% | |
AACTTCCCATTTGTGGTGTT+GGG | + | chr2.1:3353896-3353915 | MS.gene47818:CDS | 40.0% | |
AGACTTTCTTCCTCTTGAGA+GGG | + | chr2.1:3354011-3354030 | MS.gene47818:intron | 40.0% | |
AGTCTGTGCTTCTTTCGTTA+CGG | - | chr2.1:3352671-3352690 | None:intergenic | 40.0% | |
ATTAAAACCCTCCTTTGCAG+AGG | - | chr2.1:3354164-3354183 | None:intergenic | 40.0% | |
ATTTACCATATGTTCACGGG+GGG | + | chr2.1:3354038-3354057 | MS.gene47818:intron | 40.0% | |
CAACTTGAACTTCCTTGGTA+AGG | - | chr2.1:3352255-3352274 | None:intergenic | 40.0% | |
GATTTACCATATGTTCACGG+GGG | + | chr2.1:3354037-3354056 | MS.gene47818:intron | 40.0% | |
GTAAATCAAACCCTCTCAAG+AGG | - | chr2.1:3354024-3354043 | None:intergenic | 40.0% | |
GTAATCGGCATCCACTAATT+CGG | - | chr2.1:3352625-3352644 | None:intergenic | 40.0% | |
GTCTTCAACTTGAACTTCCT+TGG | - | chr2.1:3352260-3352279 | None:intergenic | 40.0% | |
GTGCTTGAGATATGATGACA+TGG | + | chr2.1:3353400-3353419 | MS.gene47818:intron | 40.0% | |
TAGACTTTCTTCCTCTTGAG+AGG | + | chr2.1:3354010-3354029 | MS.gene47818:intron | 40.0% | |
TCCTGAAAACTTCCCATTTG+TGG | + | chr2.1:3353889-3353908 | MS.gene47818:CDS | 40.0% | |
TCGACGAGACAACACATATA+CGG | + | chr2.1:3352471-3352490 | MS.gene47818:intron | 40.0% | |
TGACTTTCAATAACATGCGG+CGG | - | chr2.1:3351985-3352004 | None:intergenic | 40.0% | |
TGTTTCCCAACACCACAAAT+GGG | - | chr2.1:3353904-3353923 | None:intergenic | 40.0% | |
TTACATGACCCACTTGAAGA+TGG | - | chr2.1:3353021-3353040 | None:intergenic | 40.0% | |
TTATATACCCACTATCACCG+AGG | - | chr2.1:3352012-3352031 | None:intergenic | 40.0% | |
TTGTTTCCCAACACCACAAA+TGG | - | chr2.1:3353905-3353924 | None:intergenic | 40.0% | |
TTTGCAGAGGTCTCAAAGTA+TGG | - | chr2.1:3354151-3354170 | None:intergenic | 40.0% | |
! | AATGGATTCCAAAAGTGCAC+AGG | - | chr2.1:3353139-3353158 | None:intergenic | 40.0% |
! | ACCACAAATGGGAAGTTTTC+AGG | - | chr2.1:3353893-3353912 | None:intergenic | 40.0% |
! | GAAGCTATTGGGCATGTTTT+TGG | + | chr2.1:3353196-3353215 | MS.gene47818:intron | 40.0% |
! | GCATTTGTTGCTTCTGTTTC+AGG | + | chr2.1:3354078-3354097 | MS.gene47818:intron | 40.0% |
! | GGTTTCTGAGAAGAAAGCAA+AGG | + | chr2.1:3354099-3354118 | MS.gene47818:intron | 40.0% |
! | TCAAGTGATTCTCTTTGAGG+AGG | + | chr2.1:3354503-3354522 | MS.gene47818:intron | 40.0% |
!! | AGGAAGTTCAAGTTGAAGAC+AGG | + | chr2.1:3352260-3352279 | MS.gene47818:CDS | 40.0% |
!! | ATACTTTGAGACCTCTGCAA+AGG | + | chr2.1:3354150-3354169 | MS.gene47818:CDS | 40.0% |
!!! | AAGCATCGATCCTTTTATCC+AGG | - | chr2.1:3353451-3353470 | None:intergenic | 40.0% |
ACCAATTGAGCTTCCTACCA+AGG | + | chr2.1:3352427-3352446 | MS.gene47818:intron | 45.0% | |
ACCTTGGTAGGAAGCTCAAT+TGG | - | chr2.1:3352431-3352450 | None:intergenic | 45.0% | |
AGACAGGTTGTTCACATTGC+AGG | + | chr2.1:3352276-3352295 | MS.gene47818:CDS | 45.0% | |
AGTTCACCACCATCTTCAAG+TGG | + | chr2.1:3353009-3353028 | MS.gene47818:intron | 45.0% | |
CAGGAGAGGTTTCAAAGTCT+TGG | + | chr2.1:3353658-3353677 | MS.gene47818:CDS | 45.0% | |
CCACCGACATCAATTGTTTC+TGG | - | chr2.1:3354592-3354611 | None:intergenic | 45.0% | |
CCAGAAACAATTGATGTCGG+TGG | + | chr2.1:3354589-3354608 | MS.gene47818:CDS | 45.0% | |
CGACGAGACAACACATATAC+GGG | + | chr2.1:3352472-3352491 | MS.gene47818:intron | 45.0% | |
CGTTGTGTACTTGCAGATCT+GGG | + | chr2.1:3353624-3353643 | MS.gene47818:intron | 45.0% | |
CTGAGAAGAAAGCAAAGGCA+TGG | + | chr2.1:3354104-3354123 | MS.gene47818:CDS | 45.0% | |
GAAACAATTGATGTCGGTGG+CGG | + | chr2.1:3354592-3354611 | MS.gene47818:CDS | 45.0% | |
GAGGTTTCAAAGTCTTGGTG+TGG | + | chr2.1:3353663-3353682 | MS.gene47818:CDS | 45.0% | |
GCGAGAAGAGTTCCTTATTC+AGG | + | chr2.1:3353765-3353784 | MS.gene47818:CDS | 45.0% | |
GGTAAGGAAATCAGCACCAA+TGG | - | chr2.1:3352239-3352258 | None:intergenic | 45.0% | |
GTCTGTGCTTCTTTCGTTAC+GGG | - | chr2.1:3352670-3352689 | None:intergenic | 45.0% | |
GTTCACCACCATCTTCAAGT+GGG | + | chr2.1:3353010-3353029 | MS.gene47818:intron | 45.0% | |
TCATCATCCTCGGTGATAGT+GGG | + | chr2.1:3352002-3352021 | MS.gene47818:CDS | 45.0% | |
TCGTTGTGTACTTGCAGATC+TGG | + | chr2.1:3353623-3353642 | MS.gene47818:intron | 45.0% | |
TTTACCATATGTTCACGGGG+GGG | + | chr2.1:3354039-3354058 | MS.gene47818:intron | 45.0% | |
! | GTGATTCTCTTTGAGGAGGA+TGG | + | chr2.1:3354507-3354526 | MS.gene47818:intron | 45.0% |
! | TGGTGGTGAACTTCATGAAC+AGG | - | chr2.1:3353001-3353020 | None:intergenic | 45.0% |
! | TTCTCTTTGAGGAGGATGGT+TGG | + | chr2.1:3354511-3354530 | MS.gene47818:intron | 45.0% |
! | TTTGAGACCTCTGCAAAGGA+GGG | + | chr2.1:3354154-3354173 | MS.gene47818:CDS | 45.0% |
!! | GGGAAGTTTTCAGGATCAGA+TGG | - | chr2.1:3353884-3353903 | None:intergenic | 45.0% |
!! | TGGTGCTGATTTCCTTACCA+AGG | + | chr2.1:3352240-3352259 | MS.gene47818:CDS | 45.0% |
!!! | TTTTTTTATTTTTATTTGTT+TGG | + | chr2.1:3352145-3352164 | MS.gene47818:intron | 5.0% |
AAGGCATGGTGTGCTTCCAA+GGG | + | chr2.1:3354118-3354137 | MS.gene47818:CDS | 50.0% | |
ACTCTTCTCGCCAGTGGTTA+AGG | - | chr2.1:3353756-3353775 | None:intergenic | 50.0% | |
CATGACCCACTTGAAGATGG+TGG | - | chr2.1:3353018-3353037 | None:intergenic | 50.0% | |
GTCATCATCCTCGGTGATAG+TGG | + | chr2.1:3352001-3352020 | MS.gene47818:CDS | 50.0% | |
TAAGGAACTCTTCTCGCCAG+TGG | - | chr2.1:3353762-3353781 | None:intergenic | 50.0% | |
TTAACCCCCCCGTGAACATA+TGG | - | chr2.1:3354046-3354065 | None:intergenic | 50.0% | |
! | AAAGGCATGGTGTGCTTCCA+AGG | + | chr2.1:3354117-3354136 | MS.gene47818:CDS | 50.0% |
! | TAGGACTGGTGAAGTGGTGA+TGG | - | chr2.1:3352819-3352838 | None:intergenic | 50.0% |
! | TTGCAGATCTGGGATACTGC+TGG | + | chr2.1:3353634-3353653 | MS.gene47818:intron | 50.0% |
!! | CTTTGAGACCTCTGCAAAGG+AGG | + | chr2.1:3354153-3354172 | MS.gene47818:CDS | 50.0% |
AGGCATGGTGTGCTTCCAAG+GGG | + | chr2.1:3354119-3354138 | MS.gene47818:CDS | 55.0% | |
GGACACAGCAATCTGCACCT+CGG | - | chr2.1:3353696-3353715 | None:intergenic | 55.0% | |
! | ACAATTGATGTCGGTGGCGG+TGG | + | chr2.1:3354595-3354614 | MS.gene47818:CDS | 55.0% |
! | CTTGGTGTGGCTTTCTACCG+AGG | + | chr2.1:3353676-3353695 | MS.gene47818:CDS | 55.0% |
! | GATCTGGGATACTGCTGGTC+AGG | + | chr2.1:3353639-3353658 | MS.gene47818:intron | 55.0% |
GGGATACTGCTGGTCAGGAG+AGG | + | chr2.1:3353644-3353663 | MS.gene47818:CDS | 60.0% | |
! | TTGATGTCGGTGGCGGTGGA+CGG | + | chr2.1:3354599-3354618 | MS.gene47818:CDS | 60.0% |
GGACGGCAACAGAGGTCACC+AGG | + | chr2.1:3354616-3354635 | MS.gene47818:CDS | 65.0% | |
GTGGCGGTGGACGGCAACAG+AGG | + | chr2.1:3354608-3354627 | MS.gene47818:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 3351965 | 3354651 | 3351965 | ID=MS.gene47818 |
chr2.1 | mRNA | 3351965 | 3354651 | 3351965 | ID=MS.gene47818.t1;Parent=MS.gene47818 |
chr2.1 | exon | 3351965 | 3352023 | 3351965 | ID=MS.gene47818.t1.exon1;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3351965 | 3352023 | 3351965 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3352171 | 3352201 | 3352171 | ID=MS.gene47818.t1.exon2;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3352171 | 3352201 | 3352171 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3352232 | 3352297 | 3352232 | ID=MS.gene47818.t1.exon3;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3352232 | 3352297 | 3352232 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3353640 | 3353786 | 3353640 | ID=MS.gene47818.t1.exon4;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3353640 | 3353786 | 3353640 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3353875 | 3353955 | 3353875 | ID=MS.gene47818.t1.exon5;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3353875 | 3353955 | 3353875 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3354100 | 3354245 | 3354100 | ID=MS.gene47818.t1.exon6;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3354100 | 3354245 | 3354100 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
chr2.1 | exon | 3354582 | 3354651 | 3354582 | ID=MS.gene47818.t1.exon7;Parent=MS.gene47818.t1 |
chr2.1 | CDS | 3354582 | 3354651 | 3354582 | ID=cds.MS.gene47818.t1;Parent=MS.gene47818.t1 |
Gene Sequence |
Protein sequence |