Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47926.t1 | RHN42810.1 | 96.9 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 2.20E-93 | 351.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47926.t1 | C6TG62 | 68.4 | 193 | 61 | 0 | 1 | 193 | 1 | 193 | 5.9e-71 | 268.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47926.t1 | A0A396GP31 | 96.9 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 1.6e-93 | 351.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050082 | MS.gene47926 | 0.886444 | 3.40E-72 | -1.69E-46 |
| MS.gene050338 | MS.gene47926 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene47926 | 0.803697 | 3.08E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene47926 | 0.835525 | 1.60E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene47926 | 0.817803 | 2.73E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene47926 | 0.811825 | 5.77E-51 | -1.69E-46 |
| MS.gene051367 | MS.gene47926 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene47926 | 0.832713 | 8.08E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene47926 | 0.812154 | 4.89E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene47926 | 0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene47926 | 0.82392 | 1.07E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene47926 | 0.826297 | 2.93E-54 | -1.69E-46 |
| MS.gene053920 | MS.gene47926 | 0.825927 | 3.59E-54 | -1.69E-46 |
| MS.gene054181 | MS.gene47926 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene47926 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene47926 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene055158 | MS.gene47926 | 0.805965 | 1.03E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene47926 | 0.829949 | 3.87E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene47926 | 0.828092 | 1.09E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene47926 | 0.8092 | 2.13E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene47926 | 0.812261 | 4.63E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene47926 | 0.8126 | 3.91E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene47926 | 0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene057261 | MS.gene47926 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene057549 | MS.gene47926 | 0.828768 | 7.48E-55 | -1.69E-46 |
| MS.gene057717 | MS.gene47926 | 0.828083 | 1.10E-54 | -1.69E-46 |
| MS.gene057768 | MS.gene47926 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene47926 | 0.840406 | 8.86E-58 | -1.69E-46 |
| MS.gene058068 | MS.gene47926 | 0.86338 | 2.59E-64 | -1.69E-46 |
| MS.gene058099 | MS.gene47926 | 0.830754 | 2.46E-55 | -1.69E-46 |
| MS.gene058111 | MS.gene47926 | 0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene47926 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene47926 | 0.808514 | 2.98E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene47926 | 0.820732 | 5.87E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene47926 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene47926 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene058382 | MS.gene47926 | 0.804223 | 2.39E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene47926 | 0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene059685 | MS.gene47926 | 0.832768 | 7.83E-56 | -1.69E-46 |
| MS.gene059953 | MS.gene47926 | 0.80254 | 5.34E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene47926 | 0.816654 | 4.95E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene47926 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene060823 | MS.gene47926 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene47926 | 0.80273 | 4.88E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47926.t1 | MTR_8g089300 | 95.876 | 194 | 8 | 0 | 1 | 194 | 1 | 194 | 5.61e-127 | 355 |
| MS.gene47926.t1 | MTR_0097s0070 | 75.773 | 194 | 46 | 1 | 1 | 193 | 1 | 194 | 1.98e-97 | 281 |
| MS.gene47926.t1 | MTR_4g118810 | 36.111 | 144 | 90 | 2 | 28 | 170 | 35 | 177 | 3.66e-25 | 97.1 |
| MS.gene47926.t1 | MTR_0004s0210 | 35.185 | 162 | 89 | 2 | 28 | 189 | 10 | 155 | 1.11e-23 | 92.4 |
| MS.gene47926.t1 | MTR_2g020060 | 35.260 | 173 | 92 | 4 | 30 | 194 | 27 | 187 | 2.13e-23 | 92.4 |
| MS.gene47926.t1 | MTR_7g108130 | 32.778 | 180 | 114 | 3 | 16 | 194 | 18 | 191 | 2.24e-23 | 92.4 |
| MS.gene47926.t1 | MTR_4g081880 | 29.630 | 189 | 106 | 6 | 9 | 184 | 6 | 180 | 2.72e-16 | 73.6 |
| MS.gene47926.t1 | MTR_4g118800 | 30.159 | 126 | 87 | 1 | 64 | 188 | 56 | 181 | 2.81e-16 | 73.6 |
| MS.gene47926.t1 | MTR_7g011090 | 28.387 | 155 | 104 | 1 | 30 | 184 | 32 | 179 | 8.16e-16 | 72.4 |
| MS.gene47926.t1 | MTR_5g041900 | 28.387 | 155 | 104 | 1 | 30 | 184 | 32 | 179 | 5.18e-13 | 64.7 |
| MS.gene47926.t1 | MTR_1g058540 | 29.861 | 144 | 92 | 3 | 30 | 172 | 42 | 177 | 5.30e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47926.t1 | AT5G44550 | 53.714 | 175 | 81 | 0 | 19 | 193 | 11 | 185 | 5.24e-61 | 189 |
| MS.gene47926.t1 | AT4G20390 | 55.491 | 173 | 76 | 1 | 23 | 194 | 14 | 186 | 2.38e-55 | 174 |
| MS.gene47926.t1 | AT4G15610 | 33.803 | 142 | 89 | 3 | 30 | 170 | 33 | 170 | 1.48e-20 | 85.1 |
| MS.gene47926.t1 | AT1G03700 | 30.189 | 159 | 95 | 2 | 28 | 186 | 11 | 153 | 1.09e-19 | 82.0 |
| MS.gene47926.t1 | AT4G15630 | 31.481 | 162 | 109 | 2 | 28 | 188 | 29 | 189 | 1.23e-19 | 82.4 |
| MS.gene47926.t1 | AT1G14160 | 32.121 | 165 | 102 | 2 | 30 | 194 | 55 | 209 | 3.87e-19 | 81.6 |
| MS.gene47926.t1 | AT4G15620 | 29.341 | 167 | 116 | 2 | 23 | 188 | 24 | 189 | 1.12e-18 | 80.1 |
| MS.gene47926.t1 | AT5G15290 | 30.114 | 176 | 108 | 4 | 1 | 171 | 1 | 166 | 1.86e-17 | 76.6 |
| MS.gene47926.t1 | AT3G06390 | 31.061 | 132 | 87 | 2 | 31 | 161 | 42 | 170 | 3.20e-14 | 68.6 |
| MS.gene47926.t1 | AT4G03540 | 28.244 | 131 | 78 | 2 | 43 | 173 | 26 | 140 | 1.53e-13 | 65.9 |
Find 45 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTCAGTCTTCATAATT+TGG | 0.186212 | 4.1:+11465690 | MS.gene47926:CDS |
| GCCTTAATAGCTTCTTTCAT+TGG | 0.241559 | 4.1:+11466027 | MS.gene47926:CDS |
| GCAGTAAGAGGAACTGTAAT+TGG | 0.269342 | 4.1:-11465474 | None:intergenic |
| AAAAGGATCCAATCCTTCTT+TGG | 0.280238 | 4.1:-11465348 | None:intergenic |
| CCCAATGAAAGAAGCTATTA+AGG | 0.288413 | 4.1:-11466028 | None:intergenic |
| TCCTTCTTTGGTTTGGTCTC+AGG | 0.290070 | 4.1:-11465336 | None:intergenic |
| AGCAACATTTATGTCAGAAT+TGG | 0.314088 | 4.1:+11465927 | MS.gene47926:CDS |
| GGTAGCAACTACAAAGCTTT+TGG | 0.318946 | 4.1:-11465439 | None:intergenic |
| ATGATAGCAATGGATATATT+AGG | 0.342029 | 4.1:+11465715 | MS.gene47926:CDS |
| CCTTAATAGCTTCTTTCATT+GGG | 0.354084 | 4.1:+11466028 | MS.gene47926:CDS |
| ATGGTAATTCACATGCAAAA+TGG | 0.384012 | 4.1:+11465956 | MS.gene47926:CDS |
| TTGGGTGAATTAGATGGCTT+TGG | 0.384488 | 4.1:+11465879 | MS.gene47926:intron |
| GTTAATTGCGATTTAGTTTG+AGG | 0.384618 | 4.1:-11466095 | None:intergenic |
| GATCCAATCCTTCTTTGGTT+TGG | 0.385867 | 4.1:-11465343 | None:intergenic |
| CAGTAAGAGGAACTGTAATT+GGG | 0.394934 | 4.1:-11465473 | None:intergenic |
| TAGTTTGAGGAGTTTGTTGA+TGG | 0.399777 | 4.1:-11466082 | None:intergenic |
| GCAACATTTATGTCAGAATT+GGG | 0.419599 | 4.1:+11465928 | MS.gene47926:CDS |
| GACTCAAATTTCATAACAAA+GGG | 0.455425 | 4.1:+11465737 | MS.gene47926:CDS |
| TCCTGAGACCAAACCAAAGA+AGG | 0.459469 | 4.1:+11465335 | MS.gene47926:CDS |
| TGCTGAAACTTGGCAGTAAG+AGG | 0.478796 | 4.1:-11465486 | None:intergenic |
| ACCACCACCTCTGTTGCAAT+AGG | 0.484004 | 4.1:-11466004 | None:intergenic |
| CAACCACCCTAAGGGACAAA+AGG | 0.486521 | 4.1:-11465365 | None:intergenic |
| TTATGGACTAACACAAAAGC+TGG | 0.487148 | 4.1:-11465513 | None:intergenic |
| AGCTGGAGTATGCTGAAACT+TGG | 0.488766 | 4.1:-11465496 | None:intergenic |
| AGACCAAACCAAAGAAGGAT+TGG | 0.490966 | 4.1:+11465340 | MS.gene47926:CDS |
| AGCTTTGTAGTTGCTACCAT+TGG | 0.493742 | 4.1:+11465444 | MS.gene47926:CDS |
| GGACTCAAATTTCATAACAA+AGG | 0.497208 | 4.1:+11465736 | MS.gene47926:CDS |
| ATGTCAGAATTGGGAAGGAA+TGG | 0.507856 | 4.1:+11465937 | MS.gene47926:CDS |
| TACACTATCACAATGGCCTC+AGG | 0.512074 | 4.1:+11465276 | None:intergenic |
| TAATTTGGTTATGATAGCAA+TGG | 0.531106 | 4.1:+11465705 | MS.gene47926:CDS |
| ATGAAGACTGACAATTCCAT+TGG | 0.535909 | 4.1:-11465683 | None:intergenic |
| TCCTATTGCAACAGAGGTGG+TGG | 0.560694 | 4.1:+11466003 | MS.gene47926:CDS |
| AGGTACTTTGTGGTAGCCAA+TGG | 0.565693 | 4.1:+11465667 | MS.gene47926:intron |
| GCTCTAGCATCAAGTGGAGA+TGG | 0.573326 | 4.1:+11465901 | MS.gene47926:CDS |
| TGTAATTGGGGTGCTACCAA+TGG | 0.595649 | 4.1:-11465460 | None:intergenic |
| TTTGAGTCCTATTGCAACAG+AGG | 0.599496 | 4.1:+11465997 | MS.gene47926:CDS |
| CATTTATGTCAGAATTGGGA+AGG | 0.599985 | 4.1:+11465932 | MS.gene47926:CDS |
| ATACTGCAATCAGTGCAAGT+TGG | 0.603365 | 4.1:-11465762 | None:intergenic |
| GAGTCCTATTGCAACAGAGG+TGG | 0.611119 | 4.1:+11466000 | MS.gene47926:CDS |
| AACAAGTGTAGCTGATACAG+TGG | 0.613356 | 4.1:-11465397 | None:intergenic |
| ACATCACTGTAATAATGAGT+AGG | 0.627687 | 4.1:-11466059 | None:intergenic |
| GTGAGAATACAGGTACTTTG+TGG | 0.628246 | 4.1:+11465657 | MS.gene47926:intron |
| GCTTTGGCTCTAGCATCAAG+TGG | 0.633064 | 4.1:+11465895 | MS.gene47926:CDS |
| AGTAAGAGGAACTGTAATTG+GGG | 0.643245 | 4.1:-11465472 | None:intergenic |
| ACTGATTGCAGTATTTGACA+CGG | 0.674366 | 4.1:+11465771 | MS.gene47926:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTAGAGAGATTTTA+TGG | - | chr4.1:11465533-11465552 | None:intergenic | 15.0% |
| !! | TAACTTAAATGATCAATTAG+AGG | - | chr4.1:11465813-11465832 | None:intergenic | 20.0% |
| ! | AATGAAGAAAAAATAGAGTC+TGG | + | chr4.1:11465300-11465319 | MS.gene47926:CDS | 25.0% |
| ! | AATTGTCAGTCTTCATAATT+TGG | + | chr4.1:11465690-11465709 | MS.gene47926:CDS | 25.0% |
| ! | ATGATAGCAATGGATATATT+AGG | + | chr4.1:11465715-11465734 | MS.gene47926:CDS | 25.0% |
| ! | GACTCAAATTTCATAACAAA+GGG | + | chr4.1:11465737-11465756 | MS.gene47926:CDS | 25.0% |
| ! | TAATTTGGTTATGATAGCAA+TGG | + | chr4.1:11465705-11465724 | MS.gene47926:CDS | 25.0% |
| ! | TCACCACAAATTAAATCATA+AGG | - | chr4.1:11465641-11465660 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTTCATTTCCTG+AGG | - | chr4.1:11465295-11465314 | None:intergenic | 25.0% |
| !!! | TCACCTTATGATTTAATTTG+TGG | + | chr4.1:11465635-11465654 | MS.gene47926:intron | 25.0% |
| ACATCACTGTAATAATGAGT+AGG | - | chr4.1:11466062-11466081 | None:intergenic | 30.0% | |
| AGCAACATTTATGTCAGAAT+TGG | + | chr4.1:11465927-11465946 | MS.gene47926:CDS | 30.0% | |
| ATGGTAATTCACATGCAAAA+TGG | + | chr4.1:11465956-11465975 | MS.gene47926:CDS | 30.0% | |
| CCTTAATAGCTTCTTTCATT+GGG | + | chr4.1:11466028-11466047 | MS.gene47926:CDS | 30.0% | |
| GATTAATTGGGTGAATTAGA+TGG | + | chr4.1:11465873-11465892 | MS.gene47926:intron | 30.0% | |
| GCAACATTTATGTCAGAATT+GGG | + | chr4.1:11465928-11465947 | MS.gene47926:CDS | 30.0% | |
| GGACTCAAATTTCATAACAA+AGG | + | chr4.1:11465736-11465755 | MS.gene47926:CDS | 30.0% | |
| !! | TAGATACAGAAGTGTTAGAA+AGG | - | chr4.1:11465556-11465575 | None:intergenic | 30.0% |
| !! | TTAATTTGTGGTGAGAATAC+AGG | + | chr4.1:11465647-11465666 | MS.gene47926:intron | 30.0% |
| AAAAGGATCCAATCCTTCTT+TGG | - | chr4.1:11465351-11465370 | None:intergenic | 35.0% | |
| ACTGATTGCAGTATTTGACA+CGG | + | chr4.1:11465771-11465790 | MS.gene47926:CDS | 35.0% | |
| AGTAAGAGGAACTGTAATTG+GGG | - | chr4.1:11465475-11465494 | None:intergenic | 35.0% | |
| ATGAAGACTGACAATTCCAT+TGG | - | chr4.1:11465686-11465705 | None:intergenic | 35.0% | |
| CAGTAAGAGGAACTGTAATT+GGG | - | chr4.1:11465476-11465495 | None:intergenic | 35.0% | |
| CATTTATGTCAGAATTGGGA+AGG | + | chr4.1:11465932-11465951 | MS.gene47926:CDS | 35.0% | |
| CCCAATGAAAGAAGCTATTA+AGG | - | chr4.1:11466031-11466050 | None:intergenic | 35.0% | |
| GCCTTAATAGCTTCTTTCAT+TGG | + | chr4.1:11466027-11466046 | MS.gene47926:CDS | 35.0% | |
| ! | TTATGGACTAACACAAAAGC+TGG | - | chr4.1:11465516-11465535 | None:intergenic | 35.0% |
| !! | TAGTTTGAGGAGTTTGTTGA+TGG | - | chr4.1:11466085-11466104 | None:intergenic | 35.0% |
| AACAAGTGTAGCTGATACAG+TGG | - | chr4.1:11465400-11465419 | None:intergenic | 40.0% | |
| AGACCAAACCAAAGAAGGAT+TGG | + | chr4.1:11465340-11465359 | MS.gene47926:CDS | 40.0% | |
| ATACTGCAATCAGTGCAAGT+TGG | - | chr4.1:11465765-11465784 | None:intergenic | 40.0% | |
| ATGTCAGAATTGGGAAGGAA+TGG | + | chr4.1:11465937-11465956 | MS.gene47926:CDS | 40.0% | |
| CAAAAATGCAACCACCCTAA+GGG | - | chr4.1:11465376-11465395 | None:intergenic | 40.0% | |
| GATCCAATCCTTCTTTGGTT+TGG | - | chr4.1:11465346-11465365 | None:intergenic | 40.0% | |
| GCAGTAAGAGGAACTGTAAT+TGG | - | chr4.1:11465477-11465496 | None:intergenic | 40.0% | |
| GTGAGAATACAGGTACTTTG+TGG | + | chr4.1:11465657-11465676 | MS.gene47926:intron | 40.0% | |
| TTGGGTGAATTAGATGGCTT+TGG | + | chr4.1:11465879-11465898 | MS.gene47926:intron | 40.0% | |
| TTTGAGTCCTATTGCAACAG+AGG | + | chr4.1:11465997-11466016 | MS.gene47926:CDS | 40.0% | |
| ! | AGCTTTGTAGTTGCTACCAT+TGG | + | chr4.1:11465444-11465463 | MS.gene47926:CDS | 40.0% |
| ! | ATTGGATCCTTTTGTCCCTT+AGG | + | chr4.1:11465358-11465377 | MS.gene47926:CDS | 40.0% |
| ! | GGTAGCAACTACAAAGCTTT+TGG | - | chr4.1:11465442-11465461 | None:intergenic | 40.0% |
| ! | TTGGATCCTTTTGTCCCTTA+GGG | + | chr4.1:11465359-11465378 | MS.gene47926:CDS | 40.0% |
| AGCTGGAGTATGCTGAAACT+TGG | - | chr4.1:11465499-11465518 | None:intergenic | 45.0% | |
| AGGTACTTTGTGGTAGCCAA+TGG | + | chr4.1:11465667-11465686 | MS.gene47926:intron | 45.0% | |
| CCAAAAATGCAACCACCCTA+AGG | - | chr4.1:11465377-11465396 | None:intergenic | 45.0% | |
| TCCTGAGACCAAACCAAAGA+AGG | + | chr4.1:11465335-11465354 | MS.gene47926:CDS | 45.0% | |
| TGCTGAAACTTGGCAGTAAG+AGG | - | chr4.1:11465489-11465508 | None:intergenic | 45.0% | |
| ! | CCTTAGGGTGGTTGCATTTT+TGG | + | chr4.1:11465374-11465393 | MS.gene47926:CDS | 45.0% |
| ! | TGTAATTGGGGTGCTACCAA+TGG | - | chr4.1:11465463-11465482 | None:intergenic | 45.0% |
| !! | TCCTTCTTTGGTTTGGTCTC+AGG | - | chr4.1:11465339-11465358 | None:intergenic | 45.0% |
| !!! | ATTATATTTTTTTGATTAAT+TGG | + | chr4.1:11465860-11465879 | MS.gene47926:intron | 5.0% |
| !!! | TTATATTTTTTTGATTAATT+GGG | + | chr4.1:11465861-11465880 | MS.gene47926:intron | 5.0% |
| ACCACCACCTCTGTTGCAAT+AGG | - | chr4.1:11466007-11466026 | None:intergenic | 50.0% | |
| CAACCACCCTAAGGGACAAA+AGG | - | chr4.1:11465368-11465387 | None:intergenic | 50.0% | |
| GAGTCCTATTGCAACAGAGG+TGG | + | chr4.1:11466000-11466019 | MS.gene47926:CDS | 50.0% | |
| GCTCTAGCATCAAGTGGAGA+TGG | + | chr4.1:11465901-11465920 | MS.gene47926:CDS | 50.0% | |
| TCCTATTGCAACAGAGGTGG+TGG | + | chr4.1:11466003-11466022 | MS.gene47926:CDS | 50.0% | |
| ! | GATCCTTTTGTCCCTTAGGG+TGG | + | chr4.1:11465362-11465381 | MS.gene47926:CDS | 50.0% |
| !! | GCTTTGGCTCTAGCATCAAG+TGG | + | chr4.1:11465895-11465914 | MS.gene47926:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 11465288 | 11466116 | 11465288 | ID=MS.gene47926 |
| chr4.1 | mRNA | 11465288 | 11466116 | 11465288 | ID=MS.gene47926.t1;Parent=MS.gene47926 |
| chr4.1 | exon | 11465288 | 11465523 | 11465288 | ID=MS.gene47926.t1.exon1;Parent=MS.gene47926.t1 |
| chr4.1 | CDS | 11465288 | 11465523 | 11465288 | ID=cds.MS.gene47926.t1;Parent=MS.gene47926.t1 |
| chr4.1 | exon | 11465669 | 11465792 | 11465669 | ID=MS.gene47926.t1.exon2;Parent=MS.gene47926.t1 |
| chr4.1 | CDS | 11465669 | 11465792 | 11465669 | ID=cds.MS.gene47926.t1;Parent=MS.gene47926.t1 |
| chr4.1 | exon | 11465892 | 11466116 | 11465892 | ID=MS.gene47926.t1.exon3;Parent=MS.gene47926.t1 |
| chr4.1 | CDS | 11465892 | 11466116 | 11465892 | ID=cds.MS.gene47926.t1;Parent=MS.gene47926.t1 |
| Gene Sequence |
| Protein sequence |
