Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53305.t1 | XP_003605293.2 | 96 | 126 | 4 | 1 | 1 | 125 | 1 | 126 | 8.50E-62 | 246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53305.t1 | Q43019 | 55.6 | 126 | 50 | 4 | 1 | 124 | 1 | 122 | 9.6e-30 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53305.t1 | G7JIB4 | 96.0 | 126 | 4 | 1 | 1 | 125 | 1 | 126 | 6.1e-62 | 246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene53305 | 0.846489 | 2.10E-59 | -1.69E-46 |
| MS.gene050584 | MS.gene53305 | 0.839 | 2.06E-57 | -1.69E-46 |
| MS.gene050585 | MS.gene53305 | 0.830459 | 2.90E-55 | -1.69E-46 |
| MS.gene050587 | MS.gene53305 | 0.839652 | 1.39E-57 | -1.69E-46 |
| MS.gene050807 | MS.gene53305 | 0.822457 | 2.34E-53 | -1.69E-46 |
| MS.gene05143 | MS.gene53305 | 0.805108 | 1.57E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene53305 | 0.825799 | 3.85E-54 | -1.69E-46 |
| MS.gene051789 | MS.gene53305 | 0.862894 | 3.67E-64 | -1.69E-46 |
| MS.gene052142 | MS.gene53305 | 0.835698 | 1.44E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene53305 | 0.815457 | 9.15E-52 | -1.69E-46 |
| MS.gene052698 | MS.gene53305 | 0.814254 | 1.69E-51 | -1.69E-46 |
| MS.gene053074 | MS.gene53305 | 0.841304 | 5.15E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene53305 | 0.811244 | 7.71E-51 | -1.69E-46 |
| MS.gene053383 | MS.gene53305 | 0.820085 | 8.27E-53 | -1.69E-46 |
| MS.gene053563 | MS.gene53305 | 0.84703 | 1.50E-59 | -1.69E-46 |
| MS.gene05456 | MS.gene53305 | 0.871045 | 9.22E-67 | -1.69E-46 |
| MS.gene054596 | MS.gene53305 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene055207 | MS.gene53305 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene055359 | MS.gene53305 | 0.822705 | 2.05E-53 | -1.69E-46 |
| MS.gene059006 | MS.gene53305 | 0.860692 | 1.73E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53305 | MS.gene48831 | PPI |
| MS.gene53305 | MS.gene53311 | PPI |
| MS.gene53305 | MS.gene82253 | PPI |
| MS.gene77025 | MS.gene53305 | PPI |
| MS.gene53305 | MS.gene76710 | PPI |
| MS.gene53305 | MS.gene77022 | PPI |
| MS.gene53305 | MS.gene82221 | PPI |
| MS.gene53305 | MS.gene82256 | PPI |
| MS.gene53305 | MS.gene48796 | PPI |
| MS.gene53305 | MS.gene48828 | PPI |
| MS.gene53305 | MS.gene48829 | PPI |
| MS.gene53312 | MS.gene53305 | PPI |
| MS.gene53305 | MS.gene76745 | PPI |
| MS.gene53305 | MS.gene82222 | PPI |
| MS.gene53305 | MS.gene53309 | PPI |
| MS.gene53305 | MS.gene76714 | PPI |
| MS.gene53305 | MS.gene48797 | PPI |
| MS.gene53305 | MS.gene82219 | PPI |
| MS.gene76713 | MS.gene53305 | PPI |
| MS.gene53305 | MS.gene76747 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53305.t1 | MTR_4g028180 | 96.032 | 126 | 4 | 1 | 1 | 125 | 1 | 126 | 6.50e-84 | 241 |
| MS.gene53305.t1 | MTR_7g073170 | 45.455 | 121 | 60 | 2 | 4 | 124 | 3 | 117 | 9.12e-32 | 109 |
| MS.gene53305.t1 | MTR_7g073150 | 44.167 | 120 | 62 | 2 | 4 | 123 | 3 | 117 | 4.34e-29 | 102 |
| MS.gene53305.t1 | MTR_4g428370 | 46.552 | 116 | 56 | 3 | 9 | 124 | 62 | 171 | 1.95e-28 | 102 |
| MS.gene53305.t1 | MTR_4g027800 | 41.880 | 117 | 62 | 3 | 9 | 125 | 5 | 115 | 7.49e-26 | 94.0 |
| MS.gene53305.t1 | MTR_7g072930 | 42.276 | 123 | 65 | 3 | 4 | 125 | 3 | 120 | 2.12e-25 | 94.0 |
| MS.gene53305.t1 | MTR_4g027840 | 42.735 | 117 | 61 | 3 | 9 | 125 | 5 | 115 | 2.33e-25 | 93.6 |
| MS.gene53305.t1 | MTR_4g028190 | 38.211 | 123 | 72 | 1 | 1 | 123 | 1 | 119 | 2.91e-25 | 92.8 |
| MS.gene53305.t1 | MTR_2g062600 | 38.333 | 120 | 67 | 3 | 6 | 124 | 1 | 114 | 3.09e-23 | 87.4 |
| MS.gene53305.t1 | MTR_4g029350 | 40.984 | 122 | 65 | 3 | 4 | 125 | 2 | 116 | 3.71e-23 | 87.4 |
| MS.gene53305.t1 | MTR_1g040335 | 44.715 | 123 | 61 | 3 | 4 | 125 | 3 | 119 | 9.45e-23 | 86.3 |
| MS.gene53305.t1 | MTR_7g072900 | 42.017 | 119 | 64 | 2 | 4 | 122 | 3 | 116 | 1.03e-22 | 86.3 |
| MS.gene53305.t1 | MTR_7g072830 | 38.211 | 123 | 70 | 3 | 4 | 125 | 3 | 120 | 2.26e-22 | 85.5 |
| MS.gene53305.t1 | MTR_7g072993 | 43.443 | 122 | 62 | 3 | 4 | 123 | 3 | 119 | 7.78e-22 | 84.3 |
| MS.gene53305.t1 | MTR_4g029390 | 40.984 | 122 | 65 | 3 | 4 | 125 | 2 | 116 | 1.16e-21 | 83.6 |
| MS.gene53305.t1 | MTR_7g073130 | 41.600 | 125 | 62 | 4 | 4 | 125 | 3 | 119 | 2.99e-21 | 82.8 |
| MS.gene53305.t1 | MTR_4g029210 | 38.053 | 113 | 64 | 3 | 9 | 121 | 5 | 111 | 1.41e-20 | 80.9 |
| MS.gene53305.t1 | MTR_7g072730 | 36.364 | 121 | 71 | 3 | 4 | 123 | 3 | 118 | 1.78e-20 | 81.6 |
| MS.gene53305.t1 | MTR_7g073060 | 36.066 | 122 | 73 | 2 | 4 | 125 | 3 | 119 | 1.35e-19 | 78.2 |
| MS.gene53305.t1 | MTR_7g072980 | 36.667 | 120 | 70 | 3 | 4 | 122 | 3 | 117 | 1.24e-18 | 76.3 |
| MS.gene53305.t1 | MTR_7g073120 | 37.600 | 125 | 70 | 4 | 1 | 123 | 1 | 119 | 1.49e-18 | 76.6 |
| MS.gene53305.t1 | MTR_7g073100 | 36.667 | 120 | 71 | 2 | 4 | 123 | 3 | 117 | 1.85e-18 | 76.3 |
| MS.gene53305.t1 | MTR_7g072960 | 38.710 | 124 | 54 | 3 | 6 | 125 | 1 | 106 | 2.12e-18 | 75.5 |
| MS.gene53305.t1 | MTR_7g072810 | 39.669 | 121 | 61 | 4 | 4 | 123 | 3 | 112 | 7.17e-18 | 73.9 |
| MS.gene53305.t1 | MTR_7g072760 | 37.097 | 124 | 72 | 3 | 4 | 125 | 3 | 122 | 3.01e-16 | 69.7 |
| MS.gene53305.t1 | MTR_7g073030 | 35.833 | 120 | 72 | 2 | 4 | 123 | 3 | 117 | 9.55e-16 | 69.3 |
| MS.gene53305.t1 | MTR_7g451500 | 29.787 | 94 | 62 | 1 | 31 | 124 | 9 | 98 | 1.58e-14 | 64.7 |
| MS.gene53305.t1 | MTR_3g467100 | 31.200 | 125 | 73 | 5 | 1 | 124 | 1 | 113 | 4.64e-13 | 61.2 |
| MS.gene53305.t1 | MTR_3g046515 | 28.455 | 123 | 82 | 2 | 2 | 123 | 3 | 120 | 6.59e-13 | 60.8 |
| MS.gene53305.t1 | MTR_3g056640 | 31.624 | 117 | 74 | 2 | 10 | 125 | 11 | 122 | 7.12e-13 | 60.8 |
| MS.gene53305.t1 | MTR_3g046530 | 28.000 | 125 | 84 | 2 | 2 | 125 | 3 | 122 | 1.19e-12 | 60.5 |
| MS.gene53305.t1 | MTR_3g046540 | 28.000 | 125 | 84 | 2 | 2 | 125 | 3 | 122 | 1.38e-12 | 60.1 |
| MS.gene53305.t1 | MTR_1g040330 | 37.398 | 123 | 70 | 3 | 4 | 125 | 3 | 119 | 1.66e-12 | 60.1 |
| MS.gene53305.t1 | MTR_4g028250 | 32.773 | 119 | 73 | 4 | 9 | 125 | 5 | 118 | 9.29e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53305.t1 | AT2G15050 | 50.833 | 120 | 53 | 3 | 9 | 125 | 6 | 122 | 3.31e-32 | 110 |
| MS.gene53305.t1 | AT2G15050 | 50.847 | 118 | 52 | 3 | 9 | 123 | 6 | 120 | 2.86e-31 | 108 |
| MS.gene53305.t1 | AT2G38540 | 43.590 | 117 | 62 | 2 | 9 | 125 | 6 | 118 | 2.19e-29 | 103 |
| MS.gene53305.t1 | AT2G15050 | 51.351 | 111 | 48 | 3 | 9 | 116 | 6 | 113 | 2.25e-29 | 103 |
| MS.gene53305.t1 | AT5G01870 | 44.348 | 115 | 58 | 4 | 11 | 125 | 8 | 116 | 1.40e-28 | 100 |
| MS.gene53305.t1 | AT3G08770 | 48.515 | 101 | 48 | 3 | 25 | 125 | 17 | 113 | 5.23e-27 | 97.1 |
| MS.gene53305.t1 | AT3G08770 | 49.495 | 99 | 46 | 3 | 25 | 123 | 17 | 111 | 2.43e-26 | 95.5 |
| MS.gene53305.t1 | AT5G59320 | 46.847 | 111 | 53 | 3 | 15 | 125 | 11 | 115 | 1.48e-25 | 93.2 |
| MS.gene53305.t1 | AT5G59310 | 46.364 | 110 | 47 | 4 | 16 | 125 | 15 | 112 | 1.43e-24 | 90.9 |
| MS.gene53305.t1 | AT2G38530 | 42.735 | 117 | 63 | 2 | 9 | 125 | 6 | 118 | 8.72e-24 | 89.0 |
| MS.gene53305.t1 | AT3G51600 | 42.735 | 117 | 63 | 2 | 9 | 125 | 6 | 118 | 4.97e-23 | 87.0 |
| MS.gene53305.t1 | AT3G51590 | 39.316 | 117 | 65 | 3 | 9 | 125 | 6 | 116 | 2.33e-22 | 85.5 |
| MS.gene53305.t1 | AT2G18370 | 35.897 | 117 | 68 | 2 | 10 | 124 | 4 | 115 | 3.17e-20 | 79.7 |
| MS.gene53305.t1 | AT4G33355 | 34.426 | 122 | 73 | 3 | 4 | 125 | 5 | 119 | 1.95e-15 | 67.4 |
| MS.gene53305.t1 | AT4G33355 | 34.454 | 119 | 71 | 3 | 4 | 122 | 5 | 116 | 2.41e-14 | 64.7 |
Find 33 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTGAGCCATAGTATTA+AGG | 0.282339 | 4.3:-71020766 | None:intergenic |
| ATTGTGTTTCTTGTAACTTT+TGG | 0.294759 | 4.3:+71020620 | MS.gene53305:CDS |
| GGCAACTAGGCTTGTTTGTT+TGG | 0.295657 | 4.3:+71020595 | MS.gene53305:CDS |
| TACCTGTTACAGTCGGTATT+AGG | 0.307547 | 4.3:-71020926 | None:intergenic |
| ACCTGTTACAGTCGGTATTA+GGG | 0.357260 | 4.3:-71020925 | None:intergenic |
| GCCCTAATACCGACTGTAAC+AGG | 0.378156 | 4.3:+71020924 | MS.gene53305:CDS |
| GGGTATAAGCTTGTCACAAC+TGG | 0.381388 | 4.3:-71020677 | None:intergenic |
| GAAGACCAGCAGCAAGGTTA+AGG | 0.386841 | 4.3:-71020865 | None:intergenic |
| CATCATGGGTTACTCAACTA+TGG | 0.397979 | 4.3:+71020574 | None:intergenic |
| GTAACAGCTGCTTCAGCCTT+AGG | 0.410392 | 4.3:-71020644 | None:intergenic |
| AGTAAGGAACCTTAATACTA+TGG | 0.425103 | 4.3:+71020757 | MS.gene53305:CDS |
| AACAGCTCTACGATCATTTG+TGG | 0.431202 | 4.3:-71020786 | None:intergenic |
| AGTCGGTATTAGGGCTGATC+TGG | 0.443403 | 4.3:-71020916 | None:intergenic |
| TTAAACCTTAACCTTGCTGC+TGG | 0.450896 | 4.3:+71020860 | MS.gene53305:CDS |
| TGTGTTTCTTACATTATGAC+TGG | 0.454062 | 4.3:+71020701 | MS.gene53305:CDS |
| CACAGTGTTGTAATGGAGTA+AGG | 0.467403 | 4.3:+71020741 | MS.gene53305:CDS |
| GTTAACAGCATTCTTAATGC+AGG | 0.496302 | 4.3:-71020813 | None:intergenic |
| AAGAATGCTGTTAACCAAAG+TGG | 0.504107 | 4.3:+71020821 | MS.gene53305:CDS |
| GTTCCAGCACAGTGTTGTAA+TGG | 0.512359 | 4.3:+71020734 | MS.gene53305:CDS |
| ATGTTAACACCACATTTCCT+TGG | 0.522311 | 4.3:-71020887 | None:intergenic |
| GTATTAGGGCTGATCTGGTA+AGG | 0.526182 | 4.3:-71020911 | None:intergenic |
| TAGTGTAACTGAAACCACTT+TGG | 0.541012 | 4.3:-71020835 | None:intergenic |
| ACTCCATTACAACACTGTGC+TGG | 0.541228 | 4.3:-71020737 | None:intergenic |
| GCTTGTCACAACTGGACCAC+AGG | 0.541996 | 4.3:-71020669 | None:intergenic |
| ACCTTGCTGCTGGTCTTCCA+AGG | 0.551966 | 4.3:+71020870 | MS.gene53305:CDS |
| GTTACTCAACTATGGCAACT+AGG | 0.565651 | 4.3:+71020582 | MS.gene53305:CDS |
| GTTTCTTACATTATGACTGG+TGG | 0.579604 | 4.3:+71020704 | MS.gene53305:CDS |
| GCTGGTCTTCCAAGGAAATG+TGG | 0.584199 | 4.3:+71020878 | MS.gene53305:CDS |
| GAAGCAGCTGTTACATCCTG+TGG | 0.593294 | 4.3:+71020653 | MS.gene53305:CDS |
| TCCTTGGAAGACCAGCAGCA+AGG | 0.622205 | 4.3:-71020871 | None:intergenic |
| TAAGTAGTACCTGTTACAGT+CGG | 0.645331 | 4.3:-71020933 | None:intergenic |
| GTCATAATGTAAGAAACACA+AGG | 0.653065 | 4.3:-71020698 | None:intergenic |
| TCATAATGTAAGAAACACAA+GGG | 0.708823 | 4.3:-71020697 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACAGATATATACTAA+AGG | - | chr4.3:71020984-71021003 | None:intergenic | 15.0% |
| !! | AAATACAGATATATACTAAA+GGG | - | chr4.3:71020983-71021002 | None:intergenic | 15.0% |
| !!! | GTAACAAACTTTATTTTTTA+TGG | + | chr4.3:71021263-71021282 | MS.gene53305:intron | 15.0% |
| ! | TCATAATGTAAGAAACACAA+GGG | - | chr4.3:71020700-71020719 | None:intergenic | 25.0% |
| !! | ATTGTGTTTCTTGTAACTTT+TGG | + | chr4.3:71020620-71020639 | MS.gene53305:CDS | 25.0% |
| AAGTGTGACAAGATTTAAAG+TGG | + | chr4.3:71021193-71021212 | MS.gene53305:intron | 30.0% | |
| AATCTTGTCACACTTTAGTA+TGG | - | chr4.3:71021188-71021207 | None:intergenic | 30.0% | |
| AGTAAGGAACCTTAATACTA+TGG | + | chr4.3:71020757-71020776 | MS.gene53305:CDS | 30.0% | |
| GTCATAATGTAAGAAACACA+AGG | - | chr4.3:71020701-71020720 | None:intergenic | 30.0% | |
| TATCATGTATGATCGAGATT+GGG | + | chr4.3:71021097-71021116 | MS.gene53305:intron | 30.0% | |
| TGTGTTTCTTACATTATGAC+TGG | + | chr4.3:71020701-71020720 | MS.gene53305:CDS | 30.0% | |
| TGTTTCCTATATATGTCTGA+CGG | + | chr4.3:71021290-71021309 | MS.gene53305:intron | 30.0% | |
| AAAGACCGTCAGACATATAT+AGG | - | chr4.3:71021298-71021317 | None:intergenic | 35.0% | |
| AAGAATGCTGTTAACCAAAG+TGG | + | chr4.3:71020821-71020840 | MS.gene53305:CDS | 35.0% | |
| ATGTTAACACCACATTTCCT+TGG | - | chr4.3:71020890-71020909 | None:intergenic | 35.0% | |
| GTATCATGTATGATCGAGAT+TGG | + | chr4.3:71021096-71021115 | MS.gene53305:intron | 35.0% | |
| GTTAACAGCATTCTTAATGC+AGG | - | chr4.3:71020816-71020835 | None:intergenic | 35.0% | |
| GTTTCTTACATTATGACTGG+TGG | + | chr4.3:71020704-71020723 | MS.gene53305:CDS | 35.0% | |
| TAAGTAGTACCTGTTACAGT+CGG | - | chr4.3:71020936-71020955 | None:intergenic | 35.0% | |
| TAGTGTAACTGAAACCACTT+TGG | - | chr4.3:71020838-71020857 | None:intergenic | 35.0% | |
| TGGTTTGAGCCATAGTATTA+AGG | - | chr4.3:71020769-71020788 | None:intergenic | 35.0% | |
| ! | GTGACAAGATTTAAAGTGGT+TGG | + | chr4.3:71021197-71021216 | MS.gene53305:intron | 35.0% |
| ! | TCTTGTAACTTTTGGTCCTA+AGG | + | chr4.3:71020628-71020647 | MS.gene53305:CDS | 35.0% |
| AACAGCTCTACGATCATTTG+TGG | - | chr4.3:71020789-71020808 | None:intergenic | 40.0% | |
| ACCTGTTACAGTCGGTATTA+GGG | - | chr4.3:71020928-71020947 | None:intergenic | 40.0% | |
| GATACGATCGAGAATGAGTT+GGG | - | chr4.3:71021081-71021100 | None:intergenic | 40.0% | |
| GTTACTCAACTATGGCAACT+AGG | + | chr4.3:71020582-71020601 | MS.gene53305:CDS | 40.0% | |
| TACCTGTTACAGTCGGTATT+AGG | - | chr4.3:71020929-71020948 | None:intergenic | 40.0% | |
| TGATACGATCGAGAATGAGT+TGG | - | chr4.3:71021082-71021101 | None:intergenic | 40.0% | |
| TTAAACCTTAACCTTGCTGC+TGG | + | chr4.3:71020860-71020879 | MS.gene53305:CDS | 40.0% | |
| ! | CACAGTGTTGTAATGGAGTA+AGG | + | chr4.3:71020741-71020760 | MS.gene53305:CDS | 40.0% |
| ACTCCATTACAACACTGTGC+TGG | - | chr4.3:71020740-71020759 | None:intergenic | 45.0% | |
| GGGTATAAGCTTGTCACAAC+TGG | - | chr4.3:71020680-71020699 | None:intergenic | 45.0% | |
| GTATTAGGGCTGATCTGGTA+AGG | - | chr4.3:71020914-71020933 | None:intergenic | 45.0% | |
| GTTCCAGCACAGTGTTGTAA+TGG | + | chr4.3:71020734-71020753 | MS.gene53305:CDS | 45.0% | |
| TCATATGTAGCCCTGCAGAT+CGG | + | chr4.3:71021055-71021074 | MS.gene53305:intron | 45.0% | |
| ! | GGCAACTAGGCTTGTTTGTT+TGG | + | chr4.3:71020595-71020614 | MS.gene53305:CDS | 45.0% |
| AGTCGGTATTAGGGCTGATC+TGG | - | chr4.3:71020919-71020938 | None:intergenic | 50.0% | |
| GAAGACCAGCAGCAAGGTTA+AGG | - | chr4.3:71020868-71020887 | None:intergenic | 50.0% | |
| GAAGCAGCTGTTACATCCTG+TGG | + | chr4.3:71020653-71020672 | MS.gene53305:CDS | 50.0% | |
| GTAACAGCTGCTTCAGCCTT+AGG | - | chr4.3:71020647-71020666 | None:intergenic | 50.0% | |
| ! | GCCCTAATACCGACTGTAAC+AGG | + | chr4.3:71020924-71020943 | MS.gene53305:CDS | 50.0% |
| !! | GCTGGTCTTCCAAGGAAATG+TGG | + | chr4.3:71020878-71020897 | MS.gene53305:CDS | 50.0% |
| GCTTGTCACAACTGGACCAC+AGG | - | chr4.3:71020672-71020691 | None:intergenic | 55.0% | |
| TCCTTGGAAGACCAGCAGCA+AGG | - | chr4.3:71020874-71020893 | None:intergenic | 55.0% | |
| ! | AATGAGTTGGGCCGATCTGC+AGG | - | chr4.3:71021069-71021088 | None:intergenic | 55.0% |
| ! | ATGAGTTGGGCCGATCTGCA+GGG | - | chr4.3:71021068-71021087 | None:intergenic | 55.0% |
| !! | ACCTTGCTGCTGGTCTTCCA+AGG | + | chr4.3:71020870-71020889 | MS.gene53305:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 71020578 | 71021346 | 71020578 | ID=MS.gene53305 |
| chr4.3 | mRNA | 71020578 | 71021346 | 71020578 | ID=MS.gene53305.t1;Parent=MS.gene53305 |
| chr4.3 | exon | 71020578 | 71020945 | 71020578 | ID=MS.gene53305.t1.exon1;Parent=MS.gene53305.t1 |
| chr4.3 | CDS | 71020578 | 71020945 | 71020578 | ID=cds.MS.gene53305.t1;Parent=MS.gene53305.t1 |
| chr4.3 | exon | 71021337 | 71021346 | 71021337 | ID=MS.gene53305.t1.exon2;Parent=MS.gene53305.t1 |
| chr4.3 | CDS | 71021337 | 71021346 | 71021337 | ID=cds.MS.gene53305.t1;Parent=MS.gene53305.t1 |
| Gene Sequence |
| Protein sequence |
