Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76713.t1 | RHN59411.1 | 89.7 | 116 | 12 | 0 | 1 | 116 | 56 | 171 | 3.80E-48 | 200.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76713.t1 | A0AT31 | 75.2 | 113 | 28 | 0 | 3 | 115 | 4 | 116 | 5.0e-41 | 168.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76713.t1 | A0A396I3M7 | 89.7 | 116 | 12 | 0 | 1 | 116 | 56 | 171 | 2.7e-48 | 200.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene76713 | 0.816562 | 5.19E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene76713 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene76713 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene76713 | 0.823903 | 1.08E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene76713 | 0.842517 | 2.46E-58 | -1.69E-46 |
| MS.gene053073 | MS.gene76713 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene76713 | 0.853081 | 3.02E-61 | -1.69E-46 |
| MS.gene053557 | MS.gene76713 | 0.849 | 4.28E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene76713 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene76713 | 0.802928 | 4.44E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene76713 | 0.824836 | 6.51E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene76713 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene059692 | MS.gene76713 | 0.807276 | 5.47E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene76713 | 0.801239 | 9.89E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene76713 | 0.839408 | 1.61E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene76713 | 0.833395 | 5.47E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene76713 | 0.80201 | 6.87E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene76713 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene76713 | 0.818889 | 1.55E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76713 | MS.gene77025 | PPI |
| MS.gene76713 | MS.gene48797 | PPI |
| MS.gene76713 | MS.gene82219 | PPI |
| MS.gene76713 | MS.gene76747 | PPI |
| MS.gene77025 | MS.gene76713 | PPI |
| MS.gene76713 | MS.gene76705 | PPI |
| MS.gene76713 | MS.gene48831 | PPI |
| MS.gene76713 | MS.gene53311 | PPI |
| MS.gene76713 | MS.gene76710 | PPI |
| MS.gene76713 | MS.gene77022 | PPI |
| MS.gene76713 | MS.gene82221 | PPI |
| MS.gene76713 | MS.gene82256 | PPI |
| MS.gene76713 | MS.gene82222 | PPI |
| MS.gene76713 | MS.gene48796 | PPI |
| MS.gene53312 | MS.gene76713 | PPI |
| MS.gene76713 | MS.gene48828 | PPI |
| MS.gene76713 | MS.gene48829 | PPI |
| MS.gene76713 | MS.gene53312 | PPI |
| MS.gene76713 | MS.gene76745 | PPI |
| MS.gene76713 | MS.gene82253 | PPI |
| MS.gene76713 | MS.gene53309 | PPI |
| MS.gene76713 | MS.gene48835 | PPI |
| MS.gene76713 | MS.gene76714 | PPI |
| MS.gene76713 | MS.gene53305 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76713.t1 | MTR_4g027840 | 88.696 | 115 | 13 | 0 | 1 | 115 | 1 | 115 | 1.96e-68 | 202 |
| MS.gene76713.t1 | MTR_4g027800 | 87.931 | 116 | 14 | 0 | 1 | 116 | 1 | 116 | 2.13e-68 | 201 |
| MS.gene76713.t1 | MTR_4g428370 | 84.483 | 116 | 18 | 0 | 1 | 116 | 58 | 173 | 1.13e-66 | 199 |
| MS.gene76713.t1 | MTR_4g029390 | 65.812 | 117 | 37 | 2 | 1 | 115 | 1 | 116 | 2.67e-47 | 148 |
| MS.gene76713.t1 | MTR_4g029350 | 65.812 | 117 | 37 | 2 | 1 | 115 | 1 | 116 | 2.94e-46 | 145 |
| MS.gene76713.t1 | MTR_4g029210 | 50.000 | 112 | 56 | 0 | 1 | 112 | 1 | 112 | 2.19e-32 | 110 |
| MS.gene76713.t1 | MTR_7g072930 | 49.107 | 112 | 54 | 2 | 4 | 113 | 7 | 117 | 1.45e-31 | 109 |
| MS.gene76713.t1 | MTR_4g028190 | 47.368 | 114 | 58 | 2 | 1 | 112 | 5 | 118 | 4.75e-30 | 104 |
| MS.gene76713.t1 | MTR_7g073150 | 46.552 | 116 | 57 | 4 | 2 | 113 | 3 | 117 | 2.22e-28 | 100 |
| MS.gene76713.t1 | MTR_7g073170 | 43.363 | 113 | 60 | 3 | 4 | 114 | 7 | 117 | 7.85e-27 | 96.3 |
| MS.gene76713.t1 | MTR_7g072830 | 39.474 | 114 | 67 | 1 | 4 | 115 | 7 | 120 | 2.13e-26 | 95.1 |
| MS.gene76713.t1 | MTR_7g072730 | 39.286 | 112 | 66 | 2 | 4 | 113 | 7 | 118 | 1.54e-25 | 94.4 |
| MS.gene76713.t1 | MTR_4g028310 | 40.336 | 119 | 68 | 1 | 1 | 116 | 1 | 119 | 1.91e-25 | 93.2 |
| MS.gene76713.t1 | MTR_4g028180 | 40.678 | 118 | 63 | 3 | 5 | 115 | 9 | 126 | 9.63e-25 | 91.3 |
| MS.gene76713.t1 | MTR_2g062600 | 41.739 | 115 | 65 | 2 | 1 | 114 | 1 | 114 | 5.01e-24 | 89.0 |
| MS.gene76713.t1 | MTR_7g073120 | 38.053 | 113 | 68 | 1 | 1 | 111 | 5 | 117 | 3.90e-22 | 85.5 |
| MS.gene76713.t1 | MTR_7g072900 | 43.243 | 111 | 60 | 2 | 4 | 112 | 7 | 116 | 1.58e-21 | 82.8 |
| MS.gene76713.t1 | MTR_7g072993 | 42.342 | 111 | 61 | 1 | 4 | 111 | 7 | 117 | 4.56e-21 | 82.0 |
| MS.gene76713.t1 | MTR_4g028250 | 39.831 | 118 | 68 | 2 | 1 | 115 | 1 | 118 | 8.01e-21 | 80.9 |
| MS.gene76713.t1 | MTR_7g072960 | 41.121 | 107 | 47 | 3 | 9 | 113 | 11 | 103 | 1.90e-20 | 80.5 |
| MS.gene76713.t1 | MTR_3g467100 | 36.607 | 112 | 70 | 1 | 5 | 115 | 3 | 114 | 8.59e-20 | 78.2 |
| MS.gene76713.t1 | MTR_7g072980 | 38.393 | 112 | 65 | 3 | 4 | 112 | 7 | 117 | 3.62e-18 | 74.7 |
| MS.gene76713.t1 | MTR_7g451500 | 38.043 | 92 | 56 | 1 | 24 | 114 | 7 | 98 | 5.69e-18 | 73.2 |
| MS.gene76713.t1 | MTR_1g040335 | 41.964 | 112 | 62 | 2 | 5 | 114 | 8 | 118 | 1.70e-17 | 72.4 |
| MS.gene76713.t1 | MTR_7g073130 | 38.739 | 111 | 64 | 4 | 4 | 112 | 7 | 115 | 4.12e-17 | 71.6 |
| MS.gene76713.t1 | MTR_7g073100 | 38.053 | 113 | 63 | 2 | 4 | 112 | 7 | 116 | 1.07e-16 | 71.2 |
| MS.gene76713.t1 | MTR_4g028360 | 35.398 | 113 | 70 | 3 | 4 | 114 | 1 | 112 | 1.68e-16 | 70.1 |
| MS.gene76713.t1 | MTR_7g073060 | 37.719 | 114 | 68 | 3 | 4 | 115 | 7 | 119 | 2.40e-16 | 69.7 |
| MS.gene76713.t1 | MTR_7g072810 | 39.091 | 110 | 59 | 3 | 4 | 111 | 7 | 110 | 5.04e-15 | 66.2 |
| MS.gene76713.t1 | MTR_7g073030 | 35.455 | 110 | 68 | 3 | 4 | 111 | 7 | 115 | 7.57e-14 | 63.9 |
| MS.gene76713.t1 | MTR_3g056640 | 35.398 | 113 | 65 | 4 | 9 | 115 | 12 | 122 | 7.81e-14 | 63.2 |
| MS.gene76713.t1 | MTR_3g046515 | 34.821 | 112 | 67 | 4 | 3 | 110 | 10 | 119 | 3.12e-13 | 61.6 |
| MS.gene76713.t1 | MTR_3g046530 | 31.356 | 118 | 73 | 4 | 4 | 115 | 7 | 122 | 8.76e-13 | 60.5 |
| MS.gene76713.t1 | MTR_3g464130 | 37.778 | 90 | 51 | 3 | 25 | 110 | 18 | 106 | 3.23e-12 | 58.5 |
| MS.gene76713.t1 | MTR_3g046540 | 33.043 | 115 | 67 | 5 | 4 | 110 | 7 | 119 | 6.72e-12 | 58.2 |
| MS.gene76713.t1 | MTR_7g072987 | 48.529 | 68 | 32 | 2 | 25 | 90 | 57 | 123 | 9.99e-12 | 58.5 |
| MS.gene76713.t1 | MTR_1g040330 | 38.596 | 114 | 65 | 4 | 5 | 115 | 8 | 119 | 1.22e-11 | 57.4 |
| MS.gene76713.t1 | MTR_3g464110 | 38.554 | 83 | 48 | 2 | 33 | 113 | 92 | 173 | 3.94e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76713.t1 | AT2G38540 | 62.931 | 116 | 37 | 6 | 4 | 115 | 5 | 118 | 6.42e-38 | 124 |
| MS.gene76713.t1 | AT5G59320 | 58.182 | 110 | 44 | 1 | 6 | 115 | 8 | 115 | 9.93e-38 | 124 |
| MS.gene76713.t1 | AT5G59310 | 59.091 | 110 | 40 | 2 | 6 | 115 | 8 | 112 | 5.58e-37 | 121 |
| MS.gene76713.t1 | AT2G38530 | 59.130 | 115 | 43 | 4 | 4 | 115 | 5 | 118 | 4.05e-33 | 112 |
| MS.gene76713.t1 | AT3G51600 | 52.174 | 115 | 51 | 4 | 4 | 115 | 5 | 118 | 7.27e-30 | 103 |
| MS.gene76713.t1 | AT2G15050 | 44.068 | 118 | 60 | 4 | 4 | 115 | 5 | 122 | 2.81e-27 | 97.4 |
| MS.gene76713.t1 | AT3G51590 | 45.455 | 110 | 57 | 3 | 6 | 114 | 8 | 115 | 2.83e-27 | 97.4 |
| MS.gene76713.t1 | AT2G15050 | 43.966 | 116 | 59 | 4 | 4 | 113 | 5 | 120 | 7.44e-26 | 94.0 |
| MS.gene76713.t1 | AT4G33355 | 49.462 | 93 | 47 | 0 | 23 | 115 | 27 | 119 | 2.60e-25 | 92.4 |
| MS.gene76713.t1 | AT2G15050 | 44.037 | 109 | 57 | 3 | 4 | 108 | 5 | 113 | 4.94e-25 | 91.7 |
| MS.gene76713.t1 | AT4G33355 | 50.562 | 89 | 44 | 0 | 23 | 111 | 27 | 115 | 1.16e-24 | 90.9 |
| MS.gene76713.t1 | AT5G01870 | 43.860 | 114 | 56 | 4 | 9 | 115 | 4 | 116 | 1.25e-24 | 90.5 |
| MS.gene76713.t1 | AT3G08770 | 45.361 | 97 | 49 | 3 | 22 | 115 | 18 | 113 | 5.86e-20 | 78.6 |
| MS.gene76713.t1 | AT3G08770 | 46.237 | 93 | 46 | 3 | 22 | 111 | 18 | 109 | 5.76e-19 | 76.3 |
| MS.gene76713.t1 | AT2G18370 | 36.207 | 116 | 71 | 3 | 1 | 114 | 1 | 115 | 6.16e-18 | 73.6 |
| MS.gene76713.t1 | AT2G15325 | 34.066 | 91 | 57 | 2 | 27 | 115 | 31 | 120 | 1.32e-12 | 60.1 |
Find 31 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCTGCTGGTGCTATTTC+TGG | 0.136175 | 4.1:+71166711 | MS.gene76713:CDS |
| GGCGCAGCTTCTTCTCTTCC+TGG | 0.339122 | 4.1:+71166744 | MS.gene76713:CDS |
| CCATGCATTGGATATCTTAG+AGG | 0.354250 | 4.1:+71166588 | MS.gene76713:CDS |
| GCTATTTCTGGTTTGAATAC+AGG | 0.359485 | 4.1:+71166723 | MS.gene76713:CDS |
| CCATCTCCAGCATGCTGTGC+TGG | 0.375274 | 4.1:+71166621 | MS.gene76713:CDS |
| TTGCAAGCAGCCTGACGGTC+AGG | 0.428772 | 4.1:-71166678 | None:intergenic |
| CACTACCACACCTGACCGTC+AGG | 0.433614 | 4.1:+71166668 | MS.gene76713:CDS |
| GTGCATGATTGTTGCACCTA+TGG | 0.467928 | 4.1:+71166521 | MS.gene76713:CDS |
| GGTGCTCTTTCTCCATGCAT+TGG | 0.474474 | 4.1:+71166576 | MS.gene76713:CDS |
| CTGACGGTCAGGTGTGGTAG+TGG | 0.482598 | 4.1:-71166667 | None:intergenic |
| TTCACTCCAGCACAGCATGC+TGG | 0.485039 | 4.1:-71166627 | None:intergenic |
| AACTGCTTGAAAAGTGCTGC+TGG | 0.486030 | 4.1:+71166699 | MS.gene76713:CDS |
| ATGTTAACGCCACATTTGCC+AGG | 0.486943 | 4.1:-71166762 | None:intergenic |
| GGATATCTTAGAGGTGGTGC+TGG | 0.504129 | 4.1:+71166597 | MS.gene76713:CDS |
| GTGGAGGTACTGATCTTGTA+AGG | 0.508470 | 4.1:-71166786 | None:intergenic |
| GTCAGGTGTGGTAGTGGCGG+CGG | 0.531452 | 4.1:-71166661 | None:intergenic |
| CCAGCACAGCATGCTGGAGA+TGG | 0.550113 | 4.1:-71166621 | None:intergenic |
| AACATACGTAGCACAGTTGG+TGG | 0.554041 | 4.1:-71166805 | None:intergenic |
| TTGTTATACTTACAGCATCA+GGG | 0.577540 | 4.1:+71167157 | MS.gene76713:intron |
| GAGATTGCAGCATCTGCCAT+AGG | 0.577723 | 4.1:-71166537 | None:intergenic |
| TCTTCTCTTCCTGGCAAATG+TGG | 0.581280 | 4.1:+71166753 | MS.gene76713:CDS |
| AAACAATATGGCAAGCATGA+AGG | 0.586081 | 4.1:+71166476 | None:intergenic |
| CCTCTAAGATATCCAATGCA+TGG | 0.598915 | 4.1:-71166588 | None:intergenic |
| ATAAACATACGTAGCACAGT+TGG | 0.615719 | 4.1:-71166808 | None:intergenic |
| AGCAGCCTGACGGTCAGGTG+TGG | 0.616597 | 4.1:-71166673 | None:intergenic |
| TGCATTGGATATCTTAGAGG+TGG | 0.623803 | 4.1:+71166591 | MS.gene76713:CDS |
| AGCAGTTGCAAGCAGCCTGA+CGG | 0.624471 | 4.1:-71166683 | None:intergenic |
| ACGGTCAGGTGTGGTAGTGG+CGG | 0.626810 | 4.1:-71166664 | None:intergenic |
| ATACGTAGCACAGTTGGTGG+AGG | 0.639269 | 4.1:-71166802 | None:intergenic |
| GCAGATGCTGCAATCTCATG+TGG | 0.654132 | 4.1:+71166543 | MS.gene76713:CDS |
| ATCTCATGTGGACAAGTGAG+TGG | 0.724614 | 4.1:+71166555 | MS.gene76713:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTTATTAAAAAAATA+TGG | - | chr4.1:71167029-71167048 | None:intergenic | 0.0% |
| !!! | TAAATCATTCTTTTAATTTT+AGG | + | chr4.1:71166951-71166970 | MS.gene76713:intron | 10.0% |
| !!! | TTATATTATTCAATGTTTTT+GGG | + | chr4.1:71167048-71167067 | MS.gene76713:intron | 10.0% |
| !!! | TTTATATTATTCAATGTTTT+TGG | + | chr4.1:71167047-71167066 | MS.gene76713:intron | 10.0% |
| !!! | AAAATTTAGTTGTTTAACTT+TGG | - | chr4.1:71166908-71166927 | None:intergenic | 15.0% |
| !!! | TATTTTTTACCATTTGCTTA+AGG | + | chr4.1:71166992-71167011 | MS.gene76713:intron | 20.0% |
| ! | TTAAAACATCCTTAAGCAAA+TGG | - | chr4.1:71167004-71167023 | None:intergenic | 25.0% |
| !! | TAGAAAATTAATCACTGACT+AGG | + | chr4.1:71167124-71167143 | MS.gene76713:intron | 25.0% |
| !!! | CTACGAATCTACTTTTTTAT+TGG | + | chr4.1:71167092-71167111 | MS.gene76713:intron | 25.0% |
| ACTAGACTACTTGAAAAATG+AGG | - | chr4.1:71166860-71166879 | None:intergenic | 30.0% | |
| TTGTTATACTTACAGCATCA+GGG | + | chr4.1:71167157-71167176 | MS.gene76713:intron | 30.0% | |
| ! | TTACCATTTGAGATTGTTGA+GGG | + | chr4.1:71166928-71166947 | MS.gene76713:intron | 30.0% |
| ! | TTTACCATTTGAGATTGTTG+AGG | + | chr4.1:71166927-71166946 | MS.gene76713:intron | 30.0% |
| ! | TTTGTTATACTTACAGCATC+AGG | + | chr4.1:71167156-71167175 | MS.gene76713:intron | 30.0% |
| ATAAACATACGTAGCACAGT+TGG | - | chr4.1:71166811-71166830 | None:intergenic | 35.0% | |
| TTACCCTCAACAATCTCAAA+TGG | - | chr4.1:71166934-71166953 | None:intergenic | 35.0% | |
| !! | GCTATTTCTGGTTTGAATAC+AGG | + | chr4.1:71166723-71166742 | MS.gene76713:CDS | 35.0% |
| CCATGCATTGGATATCTTAG+AGG | + | chr4.1:71166588-71166607 | MS.gene76713:CDS | 40.0% | |
| TGCATTGGATATCTTAGAGG+TGG | + | chr4.1:71166591-71166610 | MS.gene76713:CDS | 40.0% | |
| !! | CCTCTAAGATATCCAATGCA+TGG | - | chr4.1:71166591-71166610 | None:intergenic | 40.0% |
| AACATACGTAGCACAGTTGG+TGG | - | chr4.1:71166808-71166827 | None:intergenic | 45.0% | |
| ATCTCATGTGGACAAGTGAG+TGG | + | chr4.1:71166555-71166574 | MS.gene76713:CDS | 45.0% | |
| ATGTTAACGCCACATTTGCC+AGG | - | chr4.1:71166765-71166784 | None:intergenic | 45.0% | |
| GTGCATGATTGTTGCACCTA+TGG | + | chr4.1:71166521-71166540 | MS.gene76713:CDS | 45.0% | |
| TCTTCTCTTCCTGGCAAATG+TGG | + | chr4.1:71166753-71166772 | MS.gene76713:CDS | 45.0% | |
| !! | AACTGCTTGAAAAGTGCTGC+TGG | + | chr4.1:71166699-71166718 | MS.gene76713:CDS | 45.0% |
| !! | GTGGAGGTACTGATCTTGTA+AGG | - | chr4.1:71166789-71166808 | None:intergenic | 45.0% |
| GAGATTGCAGCATCTGCCAT+AGG | - | chr4.1:71166540-71166559 | None:intergenic | 50.0% | |
| GCAGATGCTGCAATCTCATG+TGG | + | chr4.1:71166543-71166562 | MS.gene76713:CDS | 50.0% | |
| GGATATCTTAGAGGTGGTGC+TGG | + | chr4.1:71166597-71166616 | MS.gene76713:CDS | 50.0% | |
| GGTGCTCTTTCTCCATGCAT+TGG | + | chr4.1:71166576-71166595 | MS.gene76713:CDS | 50.0% | |
| !! | AGTGCTGCTGGTGCTATTTC+TGG | + | chr4.1:71166711-71166730 | MS.gene76713:CDS | 50.0% |
| !! | ATACGTAGCACAGTTGGTGG+AGG | - | chr4.1:71166805-71166824 | None:intergenic | 50.0% |
| AGCAGTTGCAAGCAGCCTGA+CGG | - | chr4.1:71166686-71166705 | None:intergenic | 55.0% | |
| TTCACTCCAGCACAGCATGC+TGG | - | chr4.1:71166630-71166649 | None:intergenic | 55.0% | |
| CACTACCACACCTGACCGTC+AGG | + | chr4.1:71166668-71166687 | MS.gene76713:CDS | 60.0% | |
| CCAGCACAGCATGCTGGAGA+TGG | - | chr4.1:71166624-71166643 | None:intergenic | 60.0% | |
| CCATCTCCAGCATGCTGTGC+TGG | + | chr4.1:71166621-71166640 | MS.gene76713:CDS | 60.0% | |
| CTGACGGTCAGGTGTGGTAG+TGG | - | chr4.1:71166670-71166689 | None:intergenic | 60.0% | |
| GGCGCAGCTTCTTCTCTTCC+TGG | + | chr4.1:71166744-71166763 | MS.gene76713:CDS | 60.0% | |
| TTGCAAGCAGCCTGACGGTC+AGG | - | chr4.1:71166681-71166700 | None:intergenic | 60.0% | |
| !! | ACGGTCAGGTGTGGTAGTGG+CGG | - | chr4.1:71166667-71166686 | None:intergenic | 60.0% |
| AGCAGCCTGACGGTCAGGTG+TGG | - | chr4.1:71166676-71166695 | None:intergenic | 65.0% | |
| !! | GTCAGGTGTGGTAGTGGCGG+CGG | - | chr4.1:71166664-71166683 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 71166483 | 71167184 | 71166483 | ID=MS.gene76713 |
| chr4.1 | mRNA | 71166483 | 71167184 | 71166483 | ID=MS.gene76713.t1;Parent=MS.gene76713 |
| chr4.1 | exon | 71166483 | 71166820 | 71166483 | ID=MS.gene76713.t1.exon1;Parent=MS.gene76713.t1 |
| chr4.1 | CDS | 71166483 | 71166820 | 71166483 | ID=cds.MS.gene76713.t1;Parent=MS.gene76713.t1 |
| chr4.1 | exon | 71167172 | 71167184 | 71167172 | ID=MS.gene76713.t1.exon2;Parent=MS.gene76713.t1 |
| chr4.1 | CDS | 71167172 | 71167184 | 71167172 | ID=cds.MS.gene76713.t1;Parent=MS.gene76713.t1 |
| Gene Sequence |
| Protein sequence |
