AlfalfaGEDB | MS.gene82253

M. sativa cultivar XinJiangDaYe / MS.gene82253

KEGG: -
GO: GO:0003674 GO:0005488 GO:0006810 GO:0006869 GO:0008150 GO:0008289 GO:0051179 GO:0051234 GO:0071702
PFAM: PF00234.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82253.t1	XP_003605345.1	93.2	117	8	0	1	117	1	117	7.40E-52	213

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82253.t1	A0AT33	71.8	110	29	2	9	117	2	110	1.3e-36	153.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82253.t1	G7JJJ6	93.2	117	8	0	1	117	1	117	5.4e-52	213.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049171	MS.gene82253	0.840108	1.06E-57	-1.69E-46
MS.gene049285	MS.gene82253	0.813534	2.44E-51	-1.69E-46
MS.gene049320	MS.gene82253	0.80787	4.09E-50	-1.69E-46
MS.gene049373	MS.gene82253	0.853888	1.77E-61	-1.69E-46
MS.gene049609	MS.gene82253	0.841691	4.08E-58	-1.69E-46
MS.gene049633	MS.gene82253	0.833842	4.23E-56	-1.69E-46
MS.gene050170	MS.gene82253	0.801848	7.42E-49	-1.69E-46
MS.gene050577	MS.gene82253	0.803886	2.81E-49	-1.69E-46
MS.gene050612	MS.gene82253	0.80408	2.56E-49	-1.69E-46
MS.gene050699	MS.gene82253	0.824321	8.60E-54	-1.69E-46
MS.gene050747	MS.gene82253	0.818499	1.90E-52	-1.69E-46
MS.gene050772	MS.gene82253	0.819513	1.12E-52	-1.69E-46
MS.gene05080	MS.gene82253	0.809029	2.32E-50	-1.69E-46
MS.gene05081	MS.gene82253	0.857944	1.16E-62	-1.69E-46
MS.gene050868	MS.gene82253	0.815932	7.18E-52	-1.69E-46
MS.gene050871	MS.gene82253	0.813409	2.60E-51	-1.69E-46
MS.gene050950	MS.gene82253	0.816657	4.94E-52	-1.69E-46
MS.gene050986	MS.gene82253	0.807547	4.79E-50	-1.69E-46
MS.gene051810	MS.gene82253	0.800032	1.74E-48	-1.69E-46
MS.gene051838	MS.gene82253	0.86492	8.59E-65	-1.69E-46
MS.gene052134	MS.gene82253	0.81192	5.50E-51	-1.69E-46
MS.gene052164	MS.gene82253	0.800334	1.51E-48	-1.69E-46
MS.gene052481	MS.gene82253	0.800502	1.40E-48	-1.69E-46
MS.gene052501	MS.gene82253	0.819995	8.66E-53	-1.69E-46
MS.gene052503	MS.gene82253	0.830539	2.77E-55	-1.69E-46
MS.gene052505	MS.gene82253	0.809297	2.03E-50	-1.69E-46
MS.gene052615	MS.gene82253	0.832809	7.65E-56	-1.69E-46
MS.gene052823	MS.gene82253	0.819591	1.07E-52	-1.69E-46
MS.gene052825	MS.gene82253	0.820813	5.62E-53	-1.69E-46
MS.gene052870	MS.gene82253	0.836193	1.08E-56	-1.69E-46
MS.gene052872	MS.gene82253	0.84161	4.28E-58	-1.69E-46
MS.gene052966	MS.gene82253	0.805414	1.35E-49	-1.69E-46
MS.gene052982	MS.gene82253	0.825096	5.65E-54	-1.69E-46
MS.gene053203	MS.gene82253	0.827418	1.58E-54	-1.69E-46
MS.gene053207	MS.gene82253	0.830335	3.11E-55	-1.69E-46
MS.gene053213	MS.gene82253	0.807789	4.26E-50	-1.69E-46
MS.gene053286	MS.gene82253	0.801181	1.02E-48	-1.69E-46
MS.gene053479	MS.gene82253	0.813589	2.37E-51	-1.69E-46
MS.gene053480	MS.gene82253	0.828858	7.12E-55	-1.69E-46
MS.gene053574	MS.gene82253	0.804359	2.24E-49	-1.69E-46
MS.gene053824	MS.gene82253	0.844286	8.31E-59	-1.69E-46
MS.gene054343	MS.gene82253	0.823861	1.10E-53	-1.69E-46
MS.gene054344	MS.gene82253	0.81239	4.34E-51	-1.69E-46
MS.gene054408	MS.gene82253	0.808126	3.61E-50	-1.69E-46
MS.gene054600	MS.gene82253	0.841898	3.59E-58	-1.69E-46
MS.gene05470	MS.gene82253	0.830774	2.43E-55	-1.69E-46
MS.gene054927	MS.gene82253	0.810643	1.04E-50	-1.69E-46
MS.gene055206	MS.gene82253	0.828781	7.43E-55	-1.69E-46
MS.gene055289	MS.gene82253	0.832882	7.33E-56	-1.69E-46
MS.gene055362	MS.gene82253	0.825665	4.14E-54	-1.69E-46
MS.gene055502	MS.gene82253	0.81291	3.34E-51	-1.69E-46
MS.gene055577	MS.gene82253	0.81375	2.19E-51	-1.69E-46
MS.gene055722	MS.gene82253	0.820234	7.64E-53	-1.69E-46
MS.gene05589	MS.gene82253	0.843311	1.51E-58	-1.69E-46
MS.gene055941	MS.gene82253	0.806623	7.52E-50	-1.69E-46
MS.gene056504	MS.gene82253	0.816766	4.67E-52	-1.69E-46
MS.gene056877	MS.gene82253	0.81616	6.38E-52	-1.69E-46
MS.gene057048	MS.gene82253	0.809407	1.92E-50	-1.69E-46
MS.gene057076	MS.gene82253	0.807901	4.03E-50	-1.69E-46
MS.gene057124	MS.gene82253	0.801624	8.25E-49	-1.69E-46
MS.gene057196	MS.gene82253	0.854288	1.36E-61	-1.69E-46
MS.gene057331	MS.gene82253	0.808049	3.75E-50	-1.69E-46
MS.gene057332	MS.gene82253	0.828378	9.30E-55	-1.69E-46
MS.gene057658	MS.gene82253	0.840893	6.61E-58	-1.69E-46
MS.gene057856	MS.gene82253	0.814009	1.92E-51	-1.69E-46
MS.gene058338	MS.gene82253	0.808884	2.49E-50	-1.69E-46
MS.gene05837	MS.gene82253	0.825427	4.71E-54	-1.69E-46
MS.gene058419	MS.gene82253	0.820286	7.43E-53	-1.69E-46
MS.gene058444	MS.gene82253	0.829465	5.07E-55	-1.69E-46
MS.gene058544	MS.gene82253	0.852673	3.96E-61	-1.69E-46
MS.gene058746	MS.gene82253	0.803746	3.01E-49	-1.69E-46
MS.gene058773	MS.gene82253	0.803791	2.95E-49	-1.69E-46
MS.gene058838	MS.gene82253	0.850466	1.67E-60	-1.69E-46
MS.gene059022	MS.gene82253	0.822341	2.49E-53	-1.69E-46
MS.gene059023	MS.gene82253	0.87099	9.61E-67	-1.69E-46
MS.gene05914	MS.gene82253	0.827825	1.26E-54	-1.69E-46
MS.gene059512	MS.gene82253	0.802071	6.68E-49	-1.69E-46
MS.gene059677	MS.gene82253	0.811819	5.79E-51	-1.69E-46
MS.gene059718	MS.gene82253	0.819606	1.06E-52	-1.69E-46
MS.gene060469	MS.gene82253	0.815969	7.04E-52	-1.69E-46
MS.gene060762	MS.gene82253	0.827384	1.61E-54	-1.69E-46
MS.gene06077	MS.gene82253	0.817489	3.21E-52	-1.69E-46
MS.gene060835	MS.gene82253	0.808242	3.41E-50	-1.69E-46
MS.gene06092	MS.gene82253	0.842405	2.64E-58	-1.69E-46
MS.gene061150	MS.gene82253	0.82508	5.70E-54	-1.69E-46
MS.gene061231	MS.gene82253	0.818239	2.17E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene48831	MS.gene82253	PPI
MS.gene53305	MS.gene82253	PPI
MS.gene82253	MS.gene76714	PPI
MS.gene82221	MS.gene82253	PPI
MS.gene53311	MS.gene82253	PPI
MS.gene82253	MS.gene48797	PPI
MS.gene48796	MS.gene82253	PPI
MS.gene76747	MS.gene82253	PPI
MS.gene82253	MS.gene82219	PPI
MS.gene82253	MS.gene76747	PPI
MS.gene77025	MS.gene82253	PPI
MS.gene82256	MS.gene82253	PPI
MS.gene48835	MS.gene82253	PPI
MS.gene82253	MS.gene82222	PPI
MS.gene76705	MS.gene82253	PPI
MS.gene82253	MS.gene48796	PPI
MS.gene76713	MS.gene82253	PPI
MS.gene53312	MS.gene82253	PPI
MS.gene77022	MS.gene82253	PPI
MS.gene48828	MS.gene82253	PPI
MS.gene82253	MS.gene48829	PPI
MS.gene82253	MS.gene76745	PPI
MS.gene76710	MS.gene82253	PPI
MS.gene82253	MS.gene53309	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82253.t1	MTR_4g029350	93.162	117	8	0	1	117	1	117	1.34e-74	217
MS.gene82253.t1	MTR_4g029390	82.906	117	20	0	1	117	1	117	5.48e-66	195
MS.gene82253.t1	MTR_4g428370	64.103	117	39	2	1	116	58	172	1.97e-44	142
MS.gene82253.t1	MTR_4g027840	61.538	117	42	2	1	116	1	115	1.40e-43	139
MS.gene82253.t1	MTR_4g027800	60.684	117	43	2	1	116	1	115	2.44e-43	138
MS.gene82253.t1	MTR_4g029210	51.456	103	50	0	10	112	9	111	2.02e-31	107
MS.gene82253.t1	MTR_4g028180	45.299	117	55	4	8	116	11	126	1.00e-25	93.6
MS.gene82253.t1	MTR_4g028190	39.831	118	70	1	1	117	5	122	3.01e-24	90.1
MS.gene82253.t1	MTR_7g072930	40.187	107	61	2	10	114	12	117	2.92e-21	83.2
MS.gene82253.t1	MTR_3g467100	34.821	112	73	0	5	116	3	114	9.18e-20	78.2
MS.gene82253.t1	MTR_7g072830	35.043	117	69	3	7	116	4	120	2.81e-19	77.0
MS.gene82253.t1	MTR_7g073150	39.655	116	66	3	2	114	3	117	4.11e-19	77.0
MS.gene82253.t1	MTR_2g062600	35.455	110	68	3	8	115	6	114	4.99e-18	73.9
MS.gene82253.t1	MTR_7g073170	36.937	111	64	5	10	117	12	119	7.47e-18	73.6
MS.gene82253.t1	MTR_3g056640	33.621	116	74	2	3	116	8	122	9.67e-18	73.2
MS.gene82253.t1	MTR_7g072730	33.913	115	69	3	7	114	4	118	3.19e-17	73.2
MS.gene82253.t1	MTR_3g046515	31.579	114	75	2	3	114	8	120	2.21e-16	69.7
MS.gene82253.t1	MTR_3g046350	34.513	113	68	3	4	114	9	117	4.10e-16	68.9
MS.gene82253.t1	MTR_3g046530	31.034	116	77	2	3	116	8	122	5.05e-16	68.9
MS.gene82253.t1	MTR_4g028250	33.051	118	77	2	1	116	1	118	6.76e-16	68.6
MS.gene82253.t1	MTR_3g046540	31.034	116	77	2	3	116	8	122	8.29e-16	68.2
MS.gene82253.t1	MTR_4g028310	35.833	120	71	3	1	116	1	118	1.03e-15	68.6
MS.gene82253.t1	MTR_3g464130	34.951	103	64	2	13	113	5	106	3.31e-15	66.2
MS.gene82253.t1	MTR_4g028360	32.456	114	73	3	4	115	1	112	2.42e-14	64.7
MS.gene82253.t1	MTR_7g451500	33.684	95	62	1	22	115	4	98	2.85e-14	63.5
MS.gene82253.t1	MTR_7g073120	33.898	118	73	3	1	113	1	118	4.47e-14	64.7
MS.gene82253.t1	MTR_3g464110	40.964	83	46	2	34	114	92	173	5.76e-14	64.7
MS.gene82253.t1	MTR_7g072993	35.345	116	71	2	2	113	3	118	1.63e-13	62.8
MS.gene82253.t1	MTR_7g073130	32.456	114	74	3	2	113	3	115	7.23e-13	60.8
MS.gene82253.t1	MTR_7g072900	38.053	113	64	5	4	113	7	116	2.81e-12	58.9
MS.gene82253.t1	MTR_1g040335	38.333	120	67	5	1	115	1	118	3.68e-12	58.9
MS.gene82253.t1	MTR_7g072960	34.783	115	53	4	4	114	7	103	7.27e-12	58.5
MS.gene82253.t1	MTR_7g072980	31.304	115	76	2	2	113	3	117	1.62e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82253.t1	AT5G59320	52.475	101	48	0	16	116	15	115	3.89e-29	102
MS.gene82253.t1	AT5G59310	53.465	101	44	1	16	116	15	112	1.11e-27	98.2
MS.gene82253.t1	AT3G51590	45.872	109	53	3	12	115	8	115	1.17e-24	90.9
MS.gene82253.t1	AT2G38540	45.000	120	60	5	1	116	1	118	2.65e-23	87.4
MS.gene82253.t1	AT4G33355	44.348	115	57	1	1	115	11	118	5.89e-23	86.7
MS.gene82253.t1	AT5G01870	39.655	116	66	3	4	116	2	116	7.81e-22	83.6
MS.gene82253.t1	AT4G33355	43.363	113	57	1	1	113	11	116	9.13e-22	83.6
MS.gene82253.t1	AT3G51600	40.678	118	68	2	1	116	1	118	3.98e-21	81.6
MS.gene82253.t1	AT2G15050	40.179	112	60	4	12	116	11	122	1.36e-20	80.5
MS.gene82253.t1	AT2G38530	43.478	115	58	3	9	116	4	118	1.84e-20	80.1
MS.gene82253.t1	AT2G15050	40.909	110	58	4	12	114	11	120	1.38e-19	78.2
MS.gene82253.t1	AT2G15050	41.748	103	55	3	12	109	11	113	4.27e-19	76.6
MS.gene82253.t1	AT3G08770	43.158	95	50	3	25	116	20	113	7.29e-19	75.9
MS.gene82253.t1	AT3G08770	43.011	93	49	3	25	114	20	111	8.11e-18	73.2
MS.gene82253.t1	AT2G18370	31.897	116	77	2	1	115	1	115	3.60e-15	66.6

Find 33 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTAGAAGTGCTAAACTTAT+AGG	0.238471	4.2:-74808069	None:intergenic
GCACTTCTACCAACTGTAAT+AGG	0.262122	4.2:+74808081	MS.gene82253:CDS
GATAAGTAATGCATGGAATA+AGG	0.317466	4.2:-74807863	None:intergenic
CCATCTCCACAGTGCTGTGC+TGG	0.355566	4.2:+74807903	MS.gene82253:CDS
CATGTGGCTGCCTCTGCTAT+TGG	0.364487	4.2:-74807822	None:intergenic
CCATGCATTACTTATCTTCA+AGG	0.366651	4.2:+74807870	MS.gene82253:CDS
TTGCAAGCAGCCTTGCGAGC+CGG	0.406399	4.2:-74807960	None:intergenic
CAACACTGGCCCGGCTCGCA+AGG	0.417244	4.2:+74807950	MS.gene82253:CDS
CACAGTGCTGTGCTGGAGTA+AGG	0.420837	4.2:+74807910	MS.gene82253:CDS
TGCAAGCAGCCTTGCGAGCC+GGG	0.430405	4.2:-74807959	None:intergenic
GTAGAAGTGCTAAACTTATA+GGG	0.434237	4.2:-74808068	None:intergenic
CTTGCGAGCCGGGCCAGTGT+TGG	0.451576	4.2:-74807949	None:intergenic
CGCCGCCGCCAACACTGGCC+CGG	0.466490	4.2:+74807941	MS.gene82253:CDS
AGCCGGGCCAGTGTTGGCGG+CGG	0.471641	4.2:-74807943	None:intergenic
ACTTATCTTCAAGGAGGTGC+TGG	0.481218	4.2:+74807879	MS.gene82253:CDS
GCGAGCCGGGCCAGTGTTGG+CGG	0.487316	4.2:-74807946	None:intergenic
GCTGCTCTCCCTGGCAAATG+TGG	0.495611	4.2:+74808035	MS.gene82253:CDS
CTTAACGCCGCCGCCAACAC+TGG	0.495662	4.2:+74807936	MS.gene82253:CDS
CCAGCACAGCACTGTGGAGA+TGG	0.501400	4.2:-74807903	None:intergenic
AACCAAGCTGCTGCTCTCCC+TGG	0.514408	4.2:+74808026	MS.gene82253:CDS
TGCCAGGGAGAGCAGCAGCT+TGG	0.525683	4.2:-74808028	None:intergenic
GTTGTTATTCAAACGAGCAA+TGG	0.551011	4.2:-74808006	None:intergenic
AACTGCTTGAAAAGTGCTGC+TGG	0.566956	4.2:+74807981	MS.gene82253:CDS
CCTTGAAGATAAGTAATGCA+TGG	0.589008	4.2:-74807870	None:intergenic
ATCAACTAGTTGACCACATG+TGG	0.592657	4.2:-74807838	None:intergenic
TGTGGTTGCAATTATGTGCA+TGG	0.608819	4.2:+74807785	MS.gene82253:CDS
TAAAACATACCTATTACAGT+TGG	0.611499	4.2:-74808090	None:intergenic
GATTAGTGCACCAATAGCAG+AGG	0.666548	4.2:+74807812	MS.gene82253:CDS
TGCATTACTTATCTTCAAGG+AGG	0.675764	4.2:+74807873	MS.gene82253:CDS
AAGCTTGAGAGTTACAATTG+TGG	0.688534	4.2:+74807767	MS.gene82253:CDS
ATAGCAGAGGCAGCCACATG+TGG	0.707329	4.2:+74807825	MS.gene82253:CDS
CTTACTCCAGCACAGCACTG+TGG	0.718135	4.2:-74807909	None:intergenic
GGTTGCAATTATGTGCATGG+TGG	0.720687	4.2:+74807788	MS.gene82253:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAGTTATATATATAATTA+GGG	-	chr4.2:74808125-74808144	None:intergenic	10.0%
!!	TAAGAGTTATATATATAATT+AGG	-	chr4.2:74808126-74808145	None:intergenic	10.0%
!!	AACAATACCTTAAAAAAAAA+AGG	+	chr4.2:74808181-74808200	MS.gene82253:intron	15.0%
!!	AATTAGGTATTATTATAACA+GGG	+	chr4.2:74808426-74808445	MS.gene82253:intron	15.0%
!!	ATTGAAATTGAAATGATAAT+TGG	+	chr4.2:74808344-74808363	MS.gene82253:intron	15.0%
!!	TAATTAGGTATTATTATAAC+AGG	+	chr4.2:74808425-74808444	MS.gene82253:intron	15.0%
!!	TATAACTCTTAAAAATTTCT+AGG	+	chr4.2:74808135-74808154	MS.gene82253:intron	15.0%
!!!	ATATGTGTCATTTATTTTTT+TGG	+	chr4.2:74808377-74808396	MS.gene82253:intron	15.0%
!!!	CATTTTACCTTTTTTTTTTA+AGG	-	chr4.2:74808191-74808210	None:intergenic	15.0%
!!	AGCAGAAAATCAATTTATAA+TGG	+	chr4.2:74808233-74808252	MS.gene82253:intron	20.0%
!!	TATTGTTTATATTTGTTTCC+AGG	-	chr4.2:74808168-74808187	None:intergenic	20.0%
!!!	TAGTATTACTTTCATTTTGA+TGG	-	chr4.2:74808549-74808568	None:intergenic	20.0%
!!!	TTGAAGCTTTATAAAATAAG+TGG	+	chr4.2:74808487-74808506	MS.gene82253:intron	20.0%
!	GAAATTGAAATGATAATTGG+AGG	+	chr4.2:74808347-74808366	MS.gene82253:intron	25.0%
!	TAAAACATACCTATTACAGT+TGG	-	chr4.2:74808093-74808112	None:intergenic	25.0%
!!	TTTTTGTCATCATCTTAGTT+TGG	-	chr4.2:74808313-74808332	None:intergenic	25.0%
!!!	AGGGTTTTGTTTTAACTAAA+AGG	+	chr4.2:74808445-74808464	MS.gene82253:intron	25.0%
!!!	ATGATTGACTTATGCAATTT+TGG	+	chr4.2:74808519-74808538	MS.gene82253:intron	25.0%
!!!	GTACATGTGTCATTTTAATT+AGG	+	chr4.2:74808410-74808429	MS.gene82253:intron	25.0%
	AAAGAAACATCTATATGCTC+AGG	-	chr4.2:74808685-74808704	None:intergenic	30.0%
	ATTGAAATGATAATTGGAGG+AGG	+	chr4.2:74808350-74808369	MS.gene82253:intron	30.0%
	GATAAGTAATGCATGGAATA+AGG	-	chr4.2:74807866-74807885	None:intergenic	30.0%
!!	AAATTTCTAGGATTCAAACC+TGG	+	chr4.2:74808147-74808166	MS.gene82253:intron	30.0%
!!	GTAGAAGTGCTAAACTTATA+GGG	-	chr4.2:74808071-74808090	None:intergenic	30.0%
	AAACATCTATATGCTCAGGA+AGG	-	chr4.2:74808681-74808700	None:intergenic	35.0%
	AACATCTATATGCTCAGGAA+GGG	-	chr4.2:74808680-74808699	None:intergenic	35.0%
	AAGCTTGAGAGTTACAATTG+TGG	+	chr4.2:74807767-74807786	MS.gene82253:CDS	35.0%
	CCATGCATTACTTATCTTCA+AGG	+	chr4.2:74807870-74807889	MS.gene82253:CDS	35.0%
	CCTTGAAGATAAGTAATGCA+TGG	-	chr4.2:74807873-74807892	None:intergenic	35.0%
	TGCATTACTTATCTTCAAGG+AGG	+	chr4.2:74807873-74807892	MS.gene82253:CDS	35.0%
!	GTTGTTATTCAAACGAGCAA+TGG	-	chr4.2:74808009-74808028	None:intergenic	35.0%
!	TTGTCATCATCTTAGTTTGG+AGG	-	chr4.2:74808310-74808329	None:intergenic	35.0%
!	TTTTAACACCACATTTGCCA+GGG	-	chr4.2:74808046-74808065	None:intergenic	35.0%
!!	ATTTTAACACCACATTTGCC+AGG	-	chr4.2:74808047-74808066	None:intergenic	35.0%
!!	GGTAGAAGTGCTAAACTTAT+AGG	-	chr4.2:74808072-74808091	None:intergenic	35.0%
	ATCAACTAGTTGACCACATG+TGG	-	chr4.2:74807841-74807860	None:intergenic	40.0%
	GCACTTCTACCAACTGTAAT+AGG	+	chr4.2:74808081-74808100	MS.gene82253:CDS	40.0%
	TGTGGTTGCAATTATGTGCA+TGG	+	chr4.2:74807785-74807804	MS.gene82253:CDS	40.0%
	ACTTGATGCTGCAATACAGC+AGG	-	chr4.2:74808766-74808785	None:intergenic	45.0%
	GATTAGTGCACCAATAGCAG+AGG	+	chr4.2:74807812-74807831	MS.gene82253:CDS	45.0%
	GGTTGCAATTATGTGCATGG+TGG	+	chr4.2:74807788-74807807	MS.gene82253:CDS	45.0%
!	ACTTATCTTCAAGGAGGTGC+TGG	+	chr4.2:74807879-74807898	MS.gene82253:CDS	45.0%
!!	AACTGCTTGAAAAGTGCTGC+TGG	+	chr4.2:74807981-74808000	MS.gene82253:CDS	45.0%
	ATAGCAGAGGCAGCCACATG+TGG	+	chr4.2:74807825-74807844	MS.gene82253:CDS	55.0%
	CACAGTGCTGTGCTGGAGTA+AGG	+	chr4.2:74807910-74807929	MS.gene82253:CDS	55.0%
	CATGTGGCTGCCTCTGCTAT+TGG	-	chr4.2:74807825-74807844	None:intergenic	55.0%
	CTTACTCCAGCACAGCACTG+TGG	-	chr4.2:74807912-74807931	None:intergenic	55.0%
	AACCAAGCTGCTGCTCTCCC+TGG	+	chr4.2:74808026-74808045	MS.gene82253:CDS	60.0%
	CCAGCACAGCACTGTGGAGA+TGG	-	chr4.2:74807906-74807925	None:intergenic	60.0%
	CCATCTCCACAGTGCTGTGC+TGG	+	chr4.2:74807903-74807922	MS.gene82253:CDS	60.0%
	GCTGCTCTCCCTGGCAAATG+TGG	+	chr4.2:74808035-74808054	MS.gene82253:CDS	60.0%
	TTGCAAGCAGCCTTGCGAGC+CGG	-	chr4.2:74807963-74807982	None:intergenic	60.0%
	CTTAACGCCGCCGCCAACAC+TGG	+	chr4.2:74807936-74807955	MS.gene82253:CDS	65.0%
	TGCAAGCAGCCTTGCGAGCC+GGG	-	chr4.2:74807962-74807981	None:intergenic	65.0%
	TGCCAGGGAGAGCAGCAGCT+TGG	-	chr4.2:74808031-74808050	None:intergenic	65.0%
	CTTGCGAGCCGGGCCAGTGT+TGG	-	chr4.2:74807952-74807971	None:intergenic	70.0%
!	CAACACTGGCCCGGCTCGCA+AGG	+	chr4.2:74807950-74807969	MS.gene82253:CDS	70.0%
!	GCGAGCCGGGCCAGTGTTGG+CGG	-	chr4.2:74807949-74807968	None:intergenic	75.0%
!!	AGCCGGGCCAGTGTTGGCGG+CGG	-	chr4.2:74807946-74807965	None:intergenic	75.0%
!	CGCCGCCGCCAACACTGGCC+CGG	+	chr4.2:74807941-74807960	MS.gene82253:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	74807762	74808790	74807762	ID=MS.gene82253
chr4.2	mRNA	74807762	74808790	74807762	ID=MS.gene82253.t1;Parent=MS.gene82253
chr4.2	exon	74807762	74808102	74807762	ID=MS.gene82253.t1.exon1;Parent=MS.gene82253.t1
chr4.2	CDS	74807762	74808102	74807762	ID=cds.MS.gene82253.t1;Parent=MS.gene82253.t1
chr4.2	exon	74808778	74808790	74808778	ID=MS.gene82253.t1.exon2;Parent=MS.gene82253.t1
chr4.2	CDS	74808778	74808790	74808778	ID=cds.MS.gene82253.t1;Parent=MS.gene82253.t1

Gene Sequence

>MS.gene82253

ATGGCAAGCTTGAGAGTTACAATTGTGGTTGCAATTATGTGCATGGTGGTGATTAGTGCACCAATAGCAGAGGCAGCCACATGTGGTCAACTAGTTGATAGCCTTATTCCATGCATTACTTATCTTCAAGGAGGTGCTGGTCCATCTCCACAGTGCTGTGCTGGAGTAAGGAAACTTAACGCCGCCGCCAACACTGGCCCGGCTCGCAAGGCTGCTTGCAACTGCTTGAAAAGTGCTGCTGGTACCATTGCTCGTTTGAATAACAACCAAGCTGCTGCTCTCCCTGGCAAATGTGGTGTTAAAATTCCCTATAAGTTTAGCACTTCTACCAACTGTAATAGGTATGTTTTATATCTCACTCCCTAATTATATATATAACTCTTAAAAATTTCTAGGATTCAAACCTGGAAACAAATATAAACAATACCTTAAAAAAAAAAGGTAAAATGAAATGAAACAAAATGATGTTGAAGCAGAAAATCAATTTATAATGGAATGAGAAAAAAACTTTTATTTCATATCATATTCTGAAACTGAACATGTGTCCTCCAAACTAAGATGATGACAAAAATTAAGTGAGACATTGAAATTGAAATGATAATTGGAGGAGGTCAAATATGTGTCATTTATTTTTTTGGTATAATATATGTACATGTGTCATTTTAATTAGGTATTATTATAACAGGGTTTTGTTTTAACTAAAAGGTATGAAAAAAAAAAAAGAGTTGAAGCTTTATAAAATAAGTGGAAACAAATTATGATTGACTTATGCAATTTTGGACAGCCATCAAAATGAAAGTAATACTATAAAATTAATAAATAAAATTATAAAATAATCTCAATTTTCATTTGACATGTGCTTTATTTTTTTTTTTTGAAGAAACTTGTGCTTTATTTTTTATTCATATATATTAGCCCTTCCTGAGCATATAGATGTTTCTTTTATTTTTTTTCTCTCATATTTTAAATTAAAAATCATATATAACTTAATTTGCTTGTTTCCTGCTGTATTGCAGCATCAAGTTCTAA

Protein sequence

>MS.gene82253.t1

MASLRVTIVVAIMCMVVISAPIAEAATCGQLVDSLIPCITYLQGGAGPSPQCCAGVRKLNAAANTGPARKAACNCLKSAAGTIARLNNNQAAALPGKCGVKIPYKFSTSTNCNSIKF