Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53368.t1 | XP_004141696.1 | 98 | 101 | 2 | 0 | 1 | 101 | 1 | 101 | 1.90E-43 | 185.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53368.t1 | Q9SKI2 | 91.0 | 100 | 9 | 0 | 1 | 100 | 2 | 101 | 2.6e-41 | 169.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53368.t1 | A0A0A0K7U7 | 98.0 | 101 | 2 | 0 | 1 | 101 | 1 | 101 | 1.4e-43 | 185.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene53368 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene049230 | MS.gene53368 | 0.811677 | 6.21E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene53368 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene53368 | 0.804503 | 2.09E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene53368 | 0.825795 | 3.86E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene53368 | 0.822959 | 1.79E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene53368 | 0.835783 | 1.37E-56 | -1.69E-46 |
| MS.gene050442 | MS.gene53368 | 0.835474 | 1.64E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene53368 | 0.803284 | 3.75E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene53368 | 0.831809 | 1.35E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene53368 | 0.835921 | 1.27E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene53368 | 0.814599 | 1.42E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene53368 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene051349 | MS.gene53368 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene53368 | 0.805352 | 1.39E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene53368 | 0.83414 | 3.56E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene53368 | 0.817897 | 2.60E-52 | -1.69E-46 |
| MS.gene052426 | MS.gene53368 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene052464 | MS.gene53368 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene053216 | MS.gene53368 | 0.803799 | 2.93E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene53368 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene53368 | 0.838122 | 3.47E-57 | -1.69E-46 |
| MS.gene05510 | MS.gene53368 | 0.804206 | 2.41E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene53368 | 0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene53368 | 0.84714 | 1.40E-59 | -1.69E-46 |
| MS.gene056873 | MS.gene53368 | 0.80292 | 4.46E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene53368 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene53368 | 0.815698 | 8.09E-52 | -1.69E-46 |
| MS.gene057194 | MS.gene53368 | 0.826411 | 2.75E-54 | -1.69E-46 |
| MS.gene05761 | MS.gene53368 | 0.824081 | 9.79E-54 | -1.69E-46 |
| MS.gene057736 | MS.gene53368 | 0.800592 | 1.34E-48 | -1.69E-46 |
| MS.gene057750 | MS.gene53368 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene53368 | 0.803982 | 2.69E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene53368 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene53368 | 0.822336 | 2.50E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene53368 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene53368 | 0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene53368 | 0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene53368 | 0.848785 | 4.91E-60 | -1.69E-46 |
| MS.gene06052 | MS.gene53368 | 0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene53368 | 0.827607 | 1.43E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene53368 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene53368 | 0.847849 | 8.91E-60 | -1.69E-46 |
| MS.gene061040 | MS.gene53368 | -0.812632 | 3.84E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53368.t1 | MTR_8g019700 | 99.438 | 178 | 1 | 0 | 1 | 178 | 1 | 178 | 3.59e-125 | 351 |
| MS.gene53368.t1 | MTR_2g041190 | 91.573 | 178 | 15 | 0 | 1 | 178 | 1 | 178 | 3.10e-104 | 298 |
| MS.gene53368.t1 | MTR_1g069715 | 45.714 | 175 | 95 | 0 | 4 | 178 | 468 | 642 | 8.21e-47 | 162 |
| MS.gene53368.t1 | MTR_2g047875 | 43.429 | 175 | 99 | 0 | 4 | 178 | 3 | 177 | 2.33e-42 | 141 |
| MS.gene53368.t1 | MTR_7g097170 | 48.571 | 175 | 90 | 0 | 4 | 178 | 3 | 177 | 1.42e-38 | 131 |
| MS.gene53368.t1 | MTR_4g057565 | 28.824 | 170 | 119 | 2 | 4 | 172 | 7 | 175 | 9.41e-18 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53368.t1 | AT2G06530 | 92.697 | 178 | 13 | 0 | 1 | 178 | 2 | 179 | 6.34e-103 | 295 |
| MS.gene53368.t1 | AT2G06530 | 94.304 | 158 | 9 | 0 | 21 | 178 | 1 | 158 | 1.13e-89 | 261 |
| MS.gene53368.t1 | AT1G03950 | 45.714 | 175 | 95 | 0 | 4 | 178 | 3 | 177 | 3.74e-52 | 166 |
| MS.gene53368.t1 | AT5G44560 | 42.286 | 175 | 101 | 0 | 4 | 178 | 3 | 177 | 7.70e-46 | 149 |
| MS.gene53368.t1 | AT5G44560 | 42.286 | 175 | 101 | 0 | 4 | 178 | 3 | 177 | 2.10e-45 | 149 |
| MS.gene53368.t1 | AT5G44560 | 43.506 | 154 | 87 | 0 | 25 | 178 | 4 | 157 | 2.78e-40 | 135 |
| MS.gene53368.t1 | AT5G44560 | 37.857 | 140 | 86 | 1 | 4 | 142 | 3 | 142 | 2.57e-27 | 100 |
| MS.gene53368.t1 | AT5G22950 | 26.846 | 149 | 107 | 2 | 4 | 151 | 7 | 154 | 4.05e-15 | 70.9 |
| MS.gene53368.t1 | AT1G17730 | 24.667 | 150 | 113 | 0 | 27 | 176 | 19 | 168 | 1.26e-11 | 60.8 |
Find 32 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTGTTGCTTTGAGAATTC+AGG | 0.273393 | 8.4:-73415989 | MS.gene53368:intron |
| CAAGCTTAAATCACAACTTC+AGG | 0.310848 | 8.4:-73416010 | MS.gene53368:CDS |
| AAATACCATTTGTCCTTGTT+TGG | 0.313748 | 8.4:+73416752 | None:intergenic |
| TTAGGGTGCTGTGAGGGTTA+TGG | 0.358019 | 8.4:-73416076 | MS.gene53368:intron |
| GGAACTTGTTTCTGAGGTAA+TGG | 0.405606 | 8.4:-73415376 | MS.gene53368:CDS |
| GAACTTGTTTCTGAGGTAAT+GGG | 0.408793 | 8.4:-73415375 | MS.gene53368:CDS |
| AAGCAATGGGTCAAATGAAT+AGG | 0.409703 | 8.4:-73415461 | MS.gene53368:CDS |
| TGCATTATCTTCTGTAAAGA+AGG | 0.410358 | 8.4:+73415426 | None:intergenic |
| GCAATTGATGATGCTTTAGA+AGG | 0.423361 | 8.4:-73415348 | MS.gene53368:CDS |
| CTGAAATCTACTCAAGCAAT+GGG | 0.427818 | 8.4:-73415507 | MS.gene53368:CDS |
| GAATGCCAAACAAGGACAAA+TGG | 0.480489 | 8.4:-73416757 | MS.gene53368:intron |
| AAAGGAGTTACTAAAGCAAT+GGG | 0.498174 | 8.4:-73415474 | MS.gene53368:CDS |
| AGTCTATTAGAGAAATTGAA+AGG | 0.508512 | 8.4:-73416833 | MS.gene53368:CDS |
| TGAAAGGCAGAATGAGAAGA+TGG | 0.511267 | 8.4:-73415397 | MS.gene53368:CDS |
| AGATAATGCAAGAGTTTGAA+AGG | 0.512294 | 8.4:-73415413 | MS.gene53368:CDS |
| AAGCTTAAATCACAACTTCA+GGG | 0.512790 | 8.4:-73416009 | MS.gene53368:CDS |
| GAAAGGAGTTACTAAAGCAA+TGG | 0.516989 | 8.4:-73415475 | MS.gene53368:CDS |
| TTTAGAAGGTGATGAAGAAG+AGG | 0.518323 | 8.4:-73415334 | MS.gene53368:CDS |
| TGCTGTGAGGGTTATGGCCA+AGG | 0.523944 | 8.4:-73416070 | MS.gene53368:CDS |
| GCGAGTTCTGATAAGATCCT+TGG | 0.525743 | 8.4:+73416053 | None:intergenic |
| GTCTATTAGAGAAATTGAAA+GGG | 0.532893 | 8.4:-73416832 | MS.gene53368:CDS |
| AATTTGTTAGGGTGCTGTGA+GGG | 0.568995 | 8.4:-73416082 | MS.gene53368:intron |
| AATCAAGTTCTTGATGAGAT+CGG | 0.569717 | 8.4:-73415291 | MS.gene53368:CDS |
| GAAGATGGAACTTGTTTCTG+AGG | 0.576457 | 8.4:-73415382 | MS.gene53368:CDS |
| CAATTTGTTAGGGTGCTGTG+AGG | 0.590012 | 8.4:-73416083 | MS.gene53368:intron |
| ACTGAAATCTACTCAAGCAA+TGG | 0.611599 | 8.4:-73415508 | MS.gene53368:CDS |
| GAAATCTACTCAAGCAATGG+GGG | 0.624835 | 8.4:-73415505 | MS.gene53368:CDS |
| ATTAAGAAGAATGCCAAACA+AGG | 0.625704 | 8.4:-73416765 | MS.gene53368:CDS |
| GAAATTGAAAGGGAAAGACA+AGG | 0.633295 | 8.4:-73416822 | MS.gene53368:CDS |
| AAATTGAAAGGGAAAGACAA+GGG | 0.643400 | 8.4:-73416821 | MS.gene53368:CDS |
| CGGAATCGATATCAACTCTG+AGG | 0.660467 | 8.4:-73415271 | None:intergenic |
| TGAAATCTACTCAAGCAATG+GGG | 0.673116 | 8.4:-73415506 | MS.gene53368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAATAATTTAATAC+TGG | - | chr8.4:73415392-73415411 | MS.gene53368:CDS | 10.0% |
| !! | AAAAACAATAATTTAATACT+GGG | - | chr8.4:73415393-73415412 | MS.gene53368:CDS | 10.0% |
| !!! | AAAATTGATAATTACTTTTA+GGG | - | chr8.4:73416113-73416132 | MS.gene53368:intron | 10.0% |
| !!! | ATTTTCACTTTTAATCAAAT+TGG | - | chr8.4:73415321-73415340 | MS.gene53368:CDS | 15.0% |
| !!! | CAAAATTGATAATTACTTTT+AGG | - | chr8.4:73416112-73416131 | MS.gene53368:intron | 15.0% |
| !! | ACATTCAAATTAAACCAAAA+CGG | + | chr8.4:73415996-73416015 | None:intergenic | 20.0% |
| !! | CTAAAAACAAAAAACACTAA+TGG | - | chr8.4:73415930-73415949 | MS.gene53368:intron | 20.0% |
| !! | TAAAAATTGTGACTTTGATT+AGG | - | chr8.4:73415443-73415462 | MS.gene53368:CDS | 20.0% |
| !!! | AATTGAGTTTTTTGGTTAAT+GGG | - | chr8.4:73415466-73415485 | MS.gene53368:CDS | 20.0% |
| !!! | AGTTTTGTTTCAATTTGTTA+GGG | - | chr8.4:73416293-73416312 | MS.gene53368:intron | 20.0% |
| !!! | TGTTTTAGTTTCATAGTTAA+CGG | - | chr8.4:73416013-73416032 | MS.gene53368:CDS | 20.0% |
| !!! | TTAGTTGTATATTTTGTTGT+AGG | - | chr8.4:73415711-73415730 | MS.gene53368:intron | 20.0% |
| ! | AAAATTTGAAGAATTACCTG+CGG | + | chr8.4:73415306-73415325 | None:intergenic | 25.0% |
| ! | AAACAAAAAACACTAATGGT+AGG | - | chr8.4:73415934-73415953 | MS.gene53368:intron | 25.0% |
| ! | AACAAAAAACACTAATGGTA+GGG | - | chr8.4:73415935-73415954 | MS.gene53368:intron | 25.0% |
| ! | AACTAAGTGCAATAGAAAAA+TGG | + | chr8.4:73415697-73415716 | None:intergenic | 25.0% |
| ! | AGTCTATTAGAGAAATTGAA+AGG | - | chr8.4:73415553-73415572 | MS.gene53368:intron | 25.0% |
| ! | CAAAAAACACAATAATTGCA+GGG | + | chr8.4:73415754-73415773 | None:intergenic | 25.0% |
| ! | GTCTATTAGAGAAATTGAAA+GGG | - | chr8.4:73415554-73415573 | MS.gene53368:intron | 25.0% |
| !! | AACGGTGTTAATTGTTATTA+GGG | - | chr8.4:73416031-73416050 | MS.gene53368:CDS | 25.0% |
| !! | CAATAGTTTTTGAATTTGCA+AGG | + | chr8.4:73415814-73415833 | None:intergenic | 25.0% |
| !! | TAACGGTGTTAATTGTTATT+AGG | - | chr8.4:73416030-73416049 | MS.gene53368:CDS | 25.0% |
| !! | TGTAAAACTTTTCAATCTGA+TGG | + | chr8.4:73416358-73416377 | None:intergenic | 25.0% |
| !!! | GAATTGAGTTTTTTGGTTAA+TGG | - | chr8.4:73415465-73415484 | MS.gene53368:CDS | 25.0% |
| !!! | GAGTTTTGTTTCAATTTGTT+AGG | - | chr8.4:73416292-73416311 | MS.gene53368:intron | 25.0% |
| !!! | TGAGAAGTTTATTGCTTTTA+AGG | - | chr8.4:73416193-73416212 | MS.gene53368:intron | 25.0% |
| !!! | TGATTAGGAATTGAGTTTTT+TGG | - | chr8.4:73415458-73415477 | MS.gene53368:CDS | 25.0% |
| !!! | TTTATTGCTTTTAAGGATTG+TGG | - | chr8.4:73416200-73416219 | MS.gene53368:intron | 25.0% |
| AAAGGAGTTACTAAAGCAAT+GGG | - | chr8.4:73416912-73416931 | MS.gene53368:intron | 30.0% | |
| AAATACCATTTGTCCTTGTT+TGG | + | chr8.4:73415637-73415656 | None:intergenic | 30.0% | |
| AAATTGAAAGGGAAAGACAA+GGG | - | chr8.4:73415565-73415584 | MS.gene53368:intron | 30.0% | |
| AAATTTGAAGAATTACCTGC+GGG | + | chr8.4:73415305-73415324 | None:intergenic | 30.0% | |
| AACTTATCTGCTAAAATCCT+AGG | + | chr8.4:73416486-73416505 | None:intergenic | 30.0% | |
| AAGCTTAAATCACAACTTCA+GGG | - | chr8.4:73416377-73416396 | MS.gene53368:intron | 30.0% | |
| AATCAAGTTCTTGATGAGAT+CGG | - | chr8.4:73417095-73417114 | MS.gene53368:intron | 30.0% | |
| AGATAATGCAAGAGTTTGAA+AGG | - | chr8.4:73416973-73416992 | MS.gene53368:intron | 30.0% | |
| ATTAAGAAGAATGCCAAACA+AGG | - | chr8.4:73415621-73415640 | MS.gene53368:intron | 30.0% | |
| CCAAAAAACACAATAATTGC+AGG | + | chr8.4:73415755-73415774 | None:intergenic | 30.0% | |
| CTCAAACAAAAGAACTTACA+CGG | + | chr8.4:73415785-73415804 | None:intergenic | 30.0% | |
| GAACAGGTATGTAATATGTT+TGG | - | chr8.4:73416250-73416269 | MS.gene53368:intron | 30.0% | |
| GGTATGTAATATGTTTGGTT+TGG | - | chr8.4:73416255-73416274 | MS.gene53368:intron | 30.0% | |
| GTCTGTAACATTACTTAATC+AGG | + | chr8.4:73415880-73415899 | None:intergenic | 30.0% | |
| TCAACACAATCATAATCACA+AGG | + | chr8.4:73415361-73415380 | None:intergenic | 30.0% | |
| TGCATTATCTTCTGTAAAGA+AGG | + | chr8.4:73416963-73416982 | None:intergenic | 30.0% | |
| TTTCATGCTCATTCATACTA+TGG | - | chr8.4:73416744-73416763 | MS.gene53368:intron | 30.0% | |
| ! | GTAAGTAACTGTGTTGTTAA+GGG | - | chr8.4:73416061-73416080 | MS.gene53368:CDS | 30.0% |
| ! | TCGTTGTATTATATCCGTTT+TGG | - | chr8.4:73415979-73415998 | MS.gene53368:intron | 30.0% |
| ! | TGTAAGTAACTGTGTTGTTA+AGG | - | chr8.4:73416060-73416079 | MS.gene53368:CDS | 30.0% |
| ! | TTGTTAAACAGAGCTTTTGA+GGG | - | chr8.4:73415509-73415528 | MS.gene53368:CDS | 30.0% |
| ! | TTTGTTAAACAGAGCTTTTG+AGG | - | chr8.4:73415508-73415527 | MS.gene53368:CDS | 30.0% |
| !! | TTTTGGTTAATGGGTAGTTT+TGG | - | chr8.4:73415475-73415494 | MS.gene53368:CDS | 30.0% |
| !!! | CCTGCAATTATTGTGTTTTT+TGG | - | chr8.4:73415752-73415771 | MS.gene53368:intron | 30.0% |
| !!! | TGTTTTAACTACGTCATATG+CGG | - | chr8.4:73415832-73415851 | MS.gene53368:intron | 30.0% |
| AAGCAATGGGTCAAATGAAT+AGG | - | chr8.4:73416925-73416944 | MS.gene53368:intron | 35.0% | |
| ACTGAAATCTACTCAAGCAA+TGG | - | chr8.4:73416878-73416897 | MS.gene53368:intron | 35.0% | |
| CAAGCTTAAATCACAACTTC+AGG | - | chr8.4:73416376-73416395 | MS.gene53368:intron | 35.0% | |
| CAGTGTCTACAATTAATCTC+AGG | + | chr8.4:73416862-73416881 | None:intergenic | 35.0% | |
| CATTACTTAATCAGGCTACA+TGG | + | chr8.4:73415872-73415891 | None:intergenic | 35.0% | |
| CCACTAGTAATGAAAGAAGA+AGG | + | chr8.4:73415669-73415688 | None:intergenic | 35.0% | |
| CCTTCTTCTTTCATTACTAG+TGG | - | chr8.4:73415666-73415685 | MS.gene53368:intron | 35.0% | |
| CTGAAATCTACTCAAGCAAT+GGG | - | chr8.4:73416879-73416898 | MS.gene53368:intron | 35.0% | |
| GAAAGGAGTTACTAAAGCAA+TGG | - | chr8.4:73416911-73416930 | MS.gene53368:intron | 35.0% | |
| GAAATTGAAAGGGAAAGACA+AGG | - | chr8.4:73415564-73415583 | MS.gene53368:intron | 35.0% | |
| GCTACATGGCGTATTATATT+GGG | + | chr8.4:73415858-73415877 | None:intergenic | 35.0% | |
| TGAAATCTACTCAAGCAATG+GGG | - | chr8.4:73416880-73416899 | MS.gene53368:intron | 35.0% | |
| TGTCTACAATTAATCTCAGG+AGG | + | chr8.4:73416859-73416878 | None:intergenic | 35.0% | |
| TTTAGAAGGTGATGAAGAAG+AGG | - | chr8.4:73417052-73417071 | MS.gene53368:intron | 35.0% | |
| ! | TGAGCATGAAAGTATACACA+AGG | + | chr8.4:73416735-73416754 | None:intergenic | 35.0% |
| !! | AGCTTTTGAGGGAGAATAAA+AGG | - | chr8.4:73415520-73415539 | MS.gene53368:intron | 35.0% |
| !! | GAACTTGTTTCTGAGGTAAT+GGG | - | chr8.4:73417011-73417030 | MS.gene53368:intron | 35.0% |
| !! | GCAATTGATGATGCTTTAGA+AGG | - | chr8.4:73417038-73417057 | MS.gene53368:intron | 35.0% |
| !! | GGATTTTAGCAGATAAGTTG+AGG | - | chr8.4:73416487-73416506 | MS.gene53368:intron | 35.0% |
| !! | TAGCGTGTTGTTATTTGAAC+AGG | - | chr8.4:73416234-73416253 | MS.gene53368:intron | 35.0% |
| CTCGTTATGTATCTGCAATG+AGG | + | chr8.4:73416712-73416731 | None:intergenic | 40.0% | |
| GAAATCTACTCAAGCAATGG+GGG | - | chr8.4:73416881-73416900 | MS.gene53368:intron | 40.0% | |
| GAATGCCAAACAAGGACAAA+TGG | - | chr8.4:73415629-73415648 | MS.gene53368:intron | 40.0% | |
| GGCTACATGGCGTATTATAT+TGG | + | chr8.4:73415859-73415878 | None:intergenic | 40.0% | |
| TGAAAGGCAGAATGAGAAGA+TGG | - | chr8.4:73416989-73417008 | MS.gene53368:intron | 40.0% | |
| TTGAAGCTTATTGTGCTCCT+AGG | - | chr8.4:73416466-73416485 | MS.gene53368:intron | 40.0% | |
| !! | AATTTGTTAGGGTGCTGTGA+GGG | - | chr8.4:73416304-73416323 | MS.gene53368:intron | 40.0% |
| !! | GAAGATGGAACTTGTTTCTG+AGG | - | chr8.4:73417004-73417023 | MS.gene53368:intron | 40.0% |
| !! | GGAACTTGTTTCTGAGGTAA+TGG | - | chr8.4:73417010-73417029 | MS.gene53368:intron | 40.0% |
| GACAAGTATCCGACATGTGT+GGG | - | chr8.4:73416581-73416600 | MS.gene53368:intron | 45.0% | |
| TGACAAGTATCCGACATGTG+TGG | - | chr8.4:73416580-73416599 | MS.gene53368:intron | 45.0% | |
| ! | GCGAGTTCTGATAAGATCCT+TGG | + | chr8.4:73416336-73416355 | None:intergenic | 45.0% |
| !! | CAATTTGTTAGGGTGCTGTG+AGG | - | chr8.4:73416303-73416322 | MS.gene53368:intron | 45.0% |
| !! | GGGTGTTGCTTTGAGAATTC+AGG | - | chr8.4:73416397-73416416 | MS.gene53368:intron | 45.0% |
| !! | TTAAAAATTATAAATTTAAC+AGG | + | chr8.4:73416796-73416815 | None:intergenic | 5.0% |
| ACCGACAGAGACATGGATAC+CGG | + | chr8.4:73416688-73416707 | None:intergenic | 50.0% | |
| ATCCGACATGTGTGGGCATT+GGG | - | chr8.4:73416588-73416607 | MS.gene53368:intron | 50.0% | |
| TATCCGACATGTGTGGGCAT+TGG | - | chr8.4:73416587-73416606 | MS.gene53368:intron | 50.0% | |
| TCCGGTATCCATGTCTCTGT+CGG | - | chr8.4:73416684-73416703 | MS.gene53368:intron | 50.0% | |
| ! | CGATGTGTAAGTGTCGTGTC+CGG | - | chr8.4:73416666-73416685 | MS.gene53368:intron | 50.0% |
| !! | TTAGGGTGCTGTGAGGGTTA+TGG | - | chr8.4:73416310-73416329 | MS.gene53368:intron | 50.0% |
| GCAATGGGGGACGCTATGAA+AGG | - | chr8.4:73416894-73416913 | MS.gene53368:intron | 55.0% | |
| GGCAGTAGAAAAACTCCCGC+AGG | - | chr8.4:73415287-73415306 | MS.gene53368:CDS | 55.0% | |
| TGCCCAATGCCCACACATGT+CGG | + | chr8.4:73416593-73416612 | None:intergenic | 55.0% | |
| TGCTGTGAGGGTTATGGCCA+AGG | - | chr8.4:73416316-73416335 | MS.gene53368:intron | 55.0% | |
| !! | ATGAGGCACCGACAGAGACA+TGG | + | chr8.4:73416695-73416714 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 73415272 | 73417136 | 73415272 | ID=MS.gene53368 |
| chr8.4 | mRNA | 73415272 | 73417136 | 73415272 | ID=MS.gene53368.t1;Parent=MS.gene53368 |
| chr8.4 | exon | 73417100 | 73417136 | 73417100 | ID=MS.gene53368.t1.exon1;Parent=MS.gene53368.t1 |
| chr8.4 | CDS | 73417100 | 73417136 | 73417100 | ID=cds.MS.gene53368.t1;Parent=MS.gene53368.t1 |
| chr8.4 | exon | 73416758 | 73416888 | 73416758 | ID=MS.gene53368.t1.exon2;Parent=MS.gene53368.t1 |
| chr8.4 | CDS | 73416758 | 73416888 | 73416758 | ID=cds.MS.gene53368.t1;Parent=MS.gene53368.t1 |
| chr8.4 | exon | 73415990 | 73416094 | 73415990 | ID=MS.gene53368.t1.exon3;Parent=MS.gene53368.t1 |
| chr8.4 | CDS | 73415990 | 73416094 | 73415990 | ID=cds.MS.gene53368.t1;Parent=MS.gene53368.t1 |
| chr8.4 | exon | 73415272 | 73415532 | 73415272 | ID=MS.gene53368.t1.exon4;Parent=MS.gene53368.t1 |
| chr8.4 | CDS | 73415272 | 73415532 | 73415272 | ID=cds.MS.gene53368.t1;Parent=MS.gene53368.t1 |
| Gene Sequence |
| Protein sequence |
