Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54282.t1 | XP_024630973.1 | 96.8 | 190 | 2 | 1 | 1 | 186 | 1 | 190 | 9.60E-62 | 246.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54282.t1 | Q69KL9 | 66.2 | 148 | 36 | 2 | 1 | 140 | 1 | 142 | 4.3e-42 | 172.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54282.t1 | A0A396JEY3 | 96.8 | 190 | 2 | 1 | 1 | 186 | 1 | 190 | 7.0e-62 | 246.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene54282 | 0.868625 | 5.68E-66 | -1.69E-46 |
| MS.gene050277 | MS.gene54282 | 0.882938 | 6.85E-71 | -1.69E-46 |
| MS.gene050303 | MS.gene54282 | 0.827021 | 1.97E-54 | -1.69E-46 |
| MS.gene050437 | MS.gene54282 | 0.808224 | 3.44E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene54282 | 0.806226 | 9.12E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene54282 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene54282 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene050955 | MS.gene54282 | 0.821616 | 3.67E-53 | -1.69E-46 |
| MS.gene051241 | MS.gene54282 | 0.852451 | 4.58E-61 | -1.69E-46 |
| MS.gene051328 | MS.gene54282 | 0.83281 | 7.64E-56 | -1.69E-46 |
| MS.gene05134 | MS.gene54282 | 0.885915 | 5.39E-72 | -1.69E-46 |
| MS.gene051451 | MS.gene54282 | 0.816819 | 4.54E-52 | -1.69E-46 |
| MS.gene051746 | MS.gene54282 | 0.809869 | 1.53E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene54282 | 0.841968 | 3.44E-58 | -1.69E-46 |
| MS.gene052941 | MS.gene54282 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene54282 | 0.861176 | 1.23E-63 | -1.69E-46 |
| MS.gene054403 | MS.gene54282 | 0.815044 | 1.13E-51 | -1.69E-46 |
| MS.gene054937 | MS.gene54282 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene54282 | 0.861831 | 7.78E-64 | -1.69E-46 |
| MS.gene055555 | MS.gene54282 | 0.818391 | 2.01E-52 | -1.69E-46 |
| MS.gene056601 | MS.gene54282 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene056631 | MS.gene54282 | 0.862545 | 4.70E-64 | -1.69E-46 |
| MS.gene057057 | MS.gene54282 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene54282 | 0.824424 | 8.13E-54 | -1.69E-46 |
| MS.gene057234 | MS.gene54282 | 0.837613 | 4.69E-57 | -1.69E-46 |
| MS.gene057694 | MS.gene54282 | 0.801112 | 1.05E-48 | -1.69E-46 |
| MS.gene057705 | MS.gene54282 | 0.885249 | 9.57E-72 | -1.69E-46 |
| MS.gene058238 | MS.gene54282 | 0.811036 | 8.56E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene54282 | 0.828434 | 9.01E-55 | -1.69E-46 |
| MS.gene059898 | MS.gene54282 | 0.828694 | 7.80E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene54282 | 0.847093 | 1.44E-59 | -1.69E-46 |
| MS.gene060429 | MS.gene54282 | 0.83766 | 4.56E-57 | -1.69E-46 |
| MS.gene060917 | MS.gene54282 | 0.87038 | 1.52E-66 | -1.69E-46 |
| MS.gene06118 | MS.gene54282 | 0.81501 | 1.15E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54282.t1 | MTR_8g058530 | 43.750 | 96 | 41 | 4 | 4 | 92 | 9 | 98 | 3.41e-12 | 63.9 |
| MS.gene54282.t1 | MTR_7g108810 | 43.750 | 96 | 41 | 4 | 4 | 92 | 110 | 199 | 4.84e-12 | 63.9 |
| MS.gene54282.t1 | MTR_7g112760 | 47.945 | 73 | 32 | 2 | 4 | 70 | 9 | 81 | 3.35e-11 | 60.5 |
| MS.gene54282.t1 | MTR_7g112760 | 47.945 | 73 | 32 | 2 | 4 | 70 | 9 | 81 | 4.22e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54282.t1 | AT4G31580 | 69.000 | 200 | 48 | 3 | 1 | 186 | 1 | 200 | 2.91e-71 | 214 |
| MS.gene54282.t1 | AT4G31580 | 69.000 | 200 | 48 | 3 | 1 | 186 | 1 | 200 | 2.91e-71 | 214 |
| MS.gene54282.t1 | AT2G24590 | 72.449 | 196 | 44 | 4 | 1 | 186 | 1 | 196 | 1.15e-63 | 195 |
| MS.gene54282.t1 | AT1G23860 | 65.476 | 168 | 48 | 4 | 1 | 166 | 1 | 160 | 5.92e-46 | 149 |
| MS.gene54282.t1 | AT1G23860 | 63.529 | 170 | 52 | 5 | 1 | 166 | 1 | 164 | 2.13e-45 | 148 |
| MS.gene54282.t1 | AT1G23860 | 63.529 | 170 | 52 | 5 | 1 | 166 | 1 | 164 | 2.13e-45 | 148 |
| MS.gene54282.t1 | AT1G23860 | 72.222 | 108 | 26 | 1 | 1 | 108 | 1 | 104 | 3.26e-44 | 144 |
| MS.gene54282.t1 | AT1G60650 | 36.585 | 123 | 66 | 2 | 2 | 112 | 12 | 134 | 2.95e-14 | 69.7 |
| MS.gene54282.t1 | AT1G60650 | 36.585 | 123 | 66 | 2 | 2 | 112 | 12 | 134 | 2.95e-14 | 69.7 |
| MS.gene54282.t1 | AT3G53500 | 32.653 | 245 | 83 | 9 | 2 | 177 | 11 | 242 | 1.91e-13 | 67.4 |
| MS.gene54282.t1 | AT1G02840 | 50.000 | 74 | 29 | 3 | 4 | 70 | 9 | 81 | 5.74e-13 | 66.2 |
| MS.gene54282.t1 | AT1G02840 | 50.000 | 74 | 29 | 3 | 4 | 70 | 9 | 81 | 9.14e-13 | 65.1 |
| MS.gene54282.t1 | AT1G02840 | 50.000 | 74 | 29 | 3 | 4 | 70 | 9 | 81 | 9.14e-13 | 65.1 |
| MS.gene54282.t1 | AT1G02840 | 50.000 | 74 | 29 | 3 | 4 | 70 | 9 | 81 | 9.14e-13 | 65.1 |
| MS.gene54282.t1 | AT1G02840 | 50.000 | 74 | 29 | 3 | 4 | 70 | 9 | 81 | 2.35e-12 | 64.3 |
| MS.gene54282.t1 | AT4G02430 | 45.455 | 77 | 34 | 3 | 4 | 73 | 9 | 84 | 9.53e-12 | 61.2 |
| MS.gene54282.t1 | AT2G37340 | 39.450 | 109 | 59 | 3 | 2 | 108 | 11 | 114 | 1.34e-11 | 62.0 |
| MS.gene54282.t1 | AT4G02430 | 45.455 | 77 | 34 | 3 | 4 | 73 | 9 | 84 | 3.79e-11 | 60.8 |
| MS.gene54282.t1 | AT4G02430 | 45.455 | 77 | 34 | 3 | 4 | 73 | 9 | 84 | 8.42e-11 | 60.1 |
Find 75 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTGGCGGCGGCGGTGG+TGG | 0.290525 | 1.1:+10332156 | MS.gene54282:CDS |
| AGGTGACACGCTGCGGCGCC+TGG | 0.293523 | 1.1:-10332731 | None:intergenic |
| GGTGGCGGCGGCGGTGGTGG+AGG | 0.354991 | 1.1:+10332159 | MS.gene54282:CDS |
| AGTGGTGGTGGCGGCGGCGG+TGG | 0.365151 | 1.1:+10332153 | MS.gene54282:CDS |
| GTATATGCAGAAATGGCATT+AGG | 0.366155 | 1.1:+10333258 | MS.gene54282:intron |
| TCGTGTGTACGTGGGTAATC+TGG | 0.366370 | 1.1:+10329729 | MS.gene54282:CDS |
| TGCGACATTCACGAGCAAAA+TGG | 0.370957 | 1.1:-10332239 | None:intergenic |
| TTCAAAATTAACTTCTGCTT+CGG | 0.370967 | 1.1:-10333289 | None:intergenic |
| GAGGAGGTGCCATATGCTAA+TGG | 0.408138 | 1.1:+10332799 | MS.gene54282:CDS |
| TTCGCAGGAGTCCAAGTTAT+GGG | 0.409234 | 1.1:+10332313 | MS.gene54282:CDS |
| AGAAGTGGTGGTGGCGGCGG+CGG | 0.411462 | 1.1:+10332150 | MS.gene54282:CDS |
| ATGTTGTGTTTGCAGTGTTT+GGG | 0.412023 | 1.1:+10330668 | MS.gene54282:intron |
| TCTAACCTTCGCCCATAACT+TGG | 0.420005 | 1.1:-10332324 | None:intergenic |
| GGAGGTCGTGGTCGTGGCGG+CGG | 0.422133 | 1.1:+10332177 | MS.gene54282:CDS |
| TATATGCAGAAATGGCATTA+GGG | 0.429730 | 1.1:+10333259 | MS.gene54282:intron |
| ATCGAGGTGGACTGCGGCTA+CGG | 0.452274 | 1.1:-10332290 | None:intergenic |
| GGTCGTGGTCGTGGCGGCGG+CGG | 0.452453 | 1.1:+10332180 | MS.gene54282:CDS |
| GGTGACACGCTGCGGCGCCT+GGG | 0.452893 | 1.1:-10332730 | None:intergenic |
| GGCGGCGGTGGTGGAGGTCG+TGG | 0.460146 | 1.1:+10332165 | MS.gene54282:CDS |
| GTGACACGCTGCGGCGCCTG+GGG | 0.468230 | 1.1:-10332729 | None:intergenic |
| TCTAGAAGTGGTGGTGGCGG+CGG | 0.468832 | 1.1:+10332147 | MS.gene54282:CDS |
| GGTGGTGGAGGTCGTGGTCG+TGG | 0.472836 | 1.1:+10332171 | MS.gene54282:CDS |
| TTTCGCAGGAGTCCAAGTTA+TGG | 0.489373 | 1.1:+10332312 | MS.gene54282:CDS |
| AGGAGGTGCCATATGCTAAT+GGG | 0.493730 | 1.1:+10332800 | MS.gene54282:CDS |
| ATAACTAACCCATTAGCATA+TGG | 0.508636 | 1.1:-10332808 | None:intergenic |
| GATGCTATACGCGATCTAGA+TGG | 0.514035 | 1.1:+10330750 | MS.gene54282:CDS |
| TGTTATGAGTGTGGTGAACC+TGG | 0.515250 | 1.1:+10332216 | MS.gene54282:CDS |
| ACCTCCTCACGCCCACGGTA+AGG | 0.515427 | 1.1:-10332784 | None:intergenic |
| AACGATGTCTCGTGTGTACG+TGG | 0.515828 | 1.1:+10329720 | None:intergenic |
| ATTAACTTCTGCTTCGGCGT+CGG | 0.515869 | 1.1:-10333283 | None:intergenic |
| TGTCGCAATCGTGGTGGTGG+TGG | 0.529392 | 1.1:+10332255 | MS.gene54282:CDS |
| TTCTGTGTAACAGGCAAGAA+TGG | 0.536794 | 1.1:+10332099 | MS.gene54282:intron |
| AATTCTAGAAGTGGTGGTGG+CGG | 0.541335 | 1.1:+10332144 | MS.gene54282:CDS |
| TGATGACCGCAGAGATGCAC+AGG | 0.545051 | 1.1:+10330728 | MS.gene54282:CDS |
| TCCTTACCGTGGGCGTGAGG+AGG | 0.547639 | 1.1:+10332783 | MS.gene54282:CDS |
| TGGGTTGCTCGAAGACCACC+TGG | 0.550517 | 1.1:+10330687 | MS.gene54282:CDS |
| CACAATTCTAGAAGTGGTGG+TGG | 0.553562 | 1.1:+10332141 | MS.gene54282:CDS |
| TCACGCCCACGGTAAGGAGG+TGG | 0.554871 | 1.1:-10332778 | None:intergenic |
| GTGTAACAGGCAAGAATGGT+TGG | 0.559187 | 1.1:+10332103 | MS.gene54282:intron |
| CATTCACGAGCAAAATGGCC+AGG | 0.561096 | 1.1:-10332234 | None:intergenic |
| GAATGTCGCAATCGTGGTGG+TGG | 0.564770 | 1.1:+10332252 | MS.gene54282:CDS |
| GCAGTCCACCTCGATTTCGC+AGG | 0.566410 | 1.1:+10332298 | MS.gene54282:CDS |
| AGTCTCAGAGAGGGACCTTG+AGG | 0.566930 | 1.1:+10329759 | MS.gene54282:CDS |
| CTTTCTCACAATTCTAGAAG+TGG | 0.567201 | 1.1:+10332135 | MS.gene54282:CDS |
| ACCTCCTTACCGTGGGCGTG+AGG | 0.571158 | 1.1:+10332780 | MS.gene54282:CDS |
| CTCGTGGACGTAGCTACAGC+AGG | 0.573406 | 1.1:+10332752 | MS.gene54282:CDS |
| AAGTCAATAAAAGCATAGCC+AGG | 0.586577 | 1.1:-10330705 | None:intergenic |
| GGAGTCCAAGTTATGGGCGA+AGG | 0.589847 | 1.1:+10332319 | MS.gene54282:CDS |
| CGCCGCAGCGTGTCACCTCG+TGG | 0.590625 | 1.1:+10332736 | MS.gene54282:CDS |
| CTTGGACTCCTGCGAAATCG+AGG | 0.595739 | 1.1:-10332306 | None:intergenic |
| GATTTGAAGTGTTATGAGTG+TGG | 0.598609 | 1.1:+10332207 | MS.gene54282:CDS |
| TCTCACAATTCTAGAAGTGG+TGG | 0.600012 | 1.1:+10332138 | MS.gene54282:CDS |
| AGGTCACCACCTCCTTACCG+TGG | 0.601922 | 1.1:+10332772 | MS.gene54282:CDS |
| TAACAGGCAAGAATGGTTGG+AGG | 0.608447 | 1.1:+10332106 | MS.gene54282:intron |
| GCTCGTGAATGTCGCAATCG+TGG | 0.611165 | 1.1:+10332246 | MS.gene54282:CDS |
| GGTGGAGGTCGTGGTCGTGG+CGG | 0.619805 | 1.1:+10332174 | MS.gene54282:CDS |
| TCCTCACGCCCACGGTAAGG+AGG | 0.623016 | 1.1:-10332781 | None:intergenic |
| CCAGGAGTTACAGTCCTCGT+GGG | 0.630414 | 1.1:+10332701 | MS.gene54282:intron |
| ACCAGGAGTTACAGTCCTCG+TGG | 0.630825 | 1.1:+10332700 | MS.gene54282:intron |
| GGTCACCACCTCCTTACCGT+GGG | 0.634356 | 1.1:+10332773 | MS.gene54282:CDS |
| ATGGCACCTCCTCACGCCCA+CGG | 0.635291 | 1.1:-10332789 | None:intergenic |
| AAACACGAAATTCATCCTCA+AGG | 0.640455 | 1.1:-10329774 | None:intergenic |
| GGAGTTACAGTCCTCGTGGG+CGG | 0.645283 | 1.1:+10332704 | MS.gene54282:intron |
| ACGATGTCTCGTGTGTACGT+GGG | 0.656849 | 1.1:+10329721 | None:intergenic |
| GGATTCTAGAGTCTCAGAGA+GGG | 0.661005 | 1.1:+10329750 | MS.gene54282:CDS |
| AACAGGCAAGAATGGTTGGA+GGG | 0.663974 | 1.1:+10332107 | MS.gene54282:intron |
| GTCCACGAGGTGACACGCTG+CGG | 0.671063 | 1.1:-10332738 | None:intergenic |
| GGACTCCTGCGAAATCGAGG+TGG | 0.673792 | 1.1:-10332303 | None:intergenic |
| TGACACGCTGCGGCGCCTGG+GGG | 0.679479 | 1.1:-10332728 | None:intergenic |
| TGCGAAATCGAGGTGGACTG+CGG | 0.679589 | 1.1:-10332296 | None:intergenic |
| CTGCTGTAGCTACGTCCACG+AGG | 0.684355 | 1.1:-10332751 | None:intergenic |
| CGTGAATGTCGCAATCGTGG+TGG | 0.699969 | 1.1:+10332249 | MS.gene54282:CDS |
| TGGATTCTAGAGTCTCAGAG+AGG | 0.702659 | 1.1:+10329749 | MS.gene54282:CDS |
| TCAATAAAAGCATAGCCAGG+TGG | 0.704252 | 1.1:-10330702 | None:intergenic |
| TAGCATCCTGTGCATCTCTG+CGG | 0.708826 | 1.1:-10330734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATTTGGAAATA+GGG | + | chr1.1:10330025-10330044 | MS.gene54282:intron | 10.0% |
| !! | TAAAGAAGAAAAAAAAAATT+TGG | + | chr1.1:10330017-10330036 | MS.gene54282:intron | 10.0% |
| !!! | ATAAAAATTATGTTTTTGTA+TGG | + | chr1.1:10330550-10330569 | MS.gene54282:intron | 10.0% |
| !!! | TAAAAATTATGTTTTTGTAT+GGG | + | chr1.1:10330551-10330570 | MS.gene54282:intron | 10.0% |
| !! | ACAAATAAACATTATATAGT+TGG | + | chr1.1:10333145-10333164 | MS.gene54282:intron | 15.0% |
| !! | GAAAAAAAAAATTTGGAAAT+AGG | + | chr1.1:10330024-10330043 | MS.gene54282:intron | 15.0% |
| !! | TTCTTAATTATTAATTGAAG+TGG | + | chr1.1:10332502-10332521 | MS.gene54282:intron | 15.0% |
| !!! | AATTATGATTAATCTTGTTT+TGG | + | chr1.1:10330626-10330645 | MS.gene54282:intron | 15.0% |
| !!! | ATAATTTTTAACCTTGAAAA+AGG | - | chr1.1:10331970-10331989 | None:intergenic | 15.0% |
| !! | AAAATACCACAATAAAACAT+TGG | - | chr1.1:10332396-10332415 | None:intergenic | 20.0% |
| !! | AAAATATCACCAAGTTAAAA+TGG | + | chr1.1:10332998-10333017 | MS.gene54282:intron | 20.0% |
| !! | AAAATATCTGCAACATTAAA+CGG | - | chr1.1:10331801-10331820 | None:intergenic | 20.0% |
| !! | AAACACAAATAAACTATTGT+TGG | + | chr1.1:10330493-10330512 | MS.gene54282:intron | 20.0% |
| !! | AAATAATGTATATGCAGAAA+TGG | + | chr1.1:10333251-10333270 | MS.gene54282:intron | 20.0% |
| !! | AAATATCACCAAGTTAAAAT+GGG | + | chr1.1:10332999-10333018 | MS.gene54282:intron | 20.0% |
| !! | AAATTAACATAAATCACATG+CGG | - | chr1.1:10333174-10333193 | None:intergenic | 20.0% |
| !! | AATAAACATTATATAGTTGG+AGG | + | chr1.1:10333148-10333167 | MS.gene54282:intron | 20.0% |
| !! | AATAACTTCGGAAAATATTA+TGG | + | chr1.1:10331311-10331330 | MS.gene54282:intron | 20.0% |
| !! | ATTTCTGCATATACATTATT+TGG | - | chr1.1:10333252-10333271 | None:intergenic | 20.0% |
| !! | CTAATATACAGACATAATAA+AGG | - | chr1.1:10333116-10333135 | None:intergenic | 20.0% |
| !! | GCTTAGTATGAAAAATTTAA+GGG | - | chr1.1:10332839-10332858 | None:intergenic | 20.0% |
| !! | GTAAATATGCTTATTAAGTA+CGG | - | chr1.1:10333094-10333113 | None:intergenic | 20.0% |
| !! | TAAATTGAATTCTCAAAAGT+TGG | - | chr1.1:10330324-10330343 | None:intergenic | 20.0% |
| !! | TGCTTAGTATGAAAAATTTA+AGG | - | chr1.1:10332840-10332859 | None:intergenic | 20.0% |
| !! | TGGCACTTTAATAATATATA+TGG | - | chr1.1:10330811-10330830 | None:intergenic | 20.0% |
| !! | TTAATTGAATATAAACGTGT+CGG | + | chr1.1:10331619-10331638 | MS.gene54282:intron | 20.0% |
| !!! | ATTCTAAGGTATAAAATAGT+AGG | - | chr1.1:10332551-10332570 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTAATGATCATGT+AGG | + | chr1.1:10332411-10332430 | MS.gene54282:intron | 20.0% |
| !!! | GTTGTGTTGATTATTTTTAA+TGG | + | chr1.1:10330427-10330446 | MS.gene54282:intron | 20.0% |
| !!! | TAACTTGATTTTTCATGTAA+AGG | + | chr1.1:10329915-10329934 | MS.gene54282:intron | 20.0% |
| !!! | TGCTTAATTTTCTTGAAATT+TGG | + | chr1.1:10331419-10331438 | MS.gene54282:intron | 20.0% |
| !!! | TTTTTCTTAATGATCATGTA+GGG | + | chr1.1:10332412-10332431 | MS.gene54282:intron | 20.0% |
| !!! | TTTTTGTAATAATGCTTTTG+TGG | + | chr1.1:10332455-10332474 | MS.gene54282:intron | 20.0% |
| ! | AAATATCTGCAACATTAAAC+GGG | - | chr1.1:10331800-10331819 | None:intergenic | 25.0% |
| ! | AAGTATGTTCATAAGAAACT+TGG | - | chr1.1:10333070-10333089 | None:intergenic | 25.0% |
| ! | AGTATGTTCATAAGAAACTT+GGG | - | chr1.1:10333069-10333088 | None:intergenic | 25.0% |
| ! | ATTATTCATAAAGCTTGTCA+AGG | - | chr1.1:10330217-10330236 | None:intergenic | 25.0% |
| ! | ATTTATTGAAATCACAGACA+TGG | - | chr1.1:10330463-10330482 | None:intergenic | 25.0% |
| ! | GAACTCTTCATATTGAAATA+AGG | + | chr1.1:10331490-10331509 | MS.gene54282:intron | 25.0% |
| ! | GGTATTAAACAGGTAAATAT+TGG | - | chr1.1:10331898-10331917 | None:intergenic | 25.0% |
| ! | TAATGTCATAGTAATATGCA+TGG | - | chr1.1:10330831-10330850 | None:intergenic | 25.0% |
| ! | TAGCAAAAGGATTATCATAT+TGG | - | chr1.1:10331941-10331960 | None:intergenic | 25.0% |
| ! | TAGTTATTATTGTCGCTATT+TGG | + | chr1.1:10332860-10332879 | MS.gene54282:intron | 25.0% |
| ! | TATGTAAGTATTTATCTCAG+AGG | + | chr1.1:10331679-10331698 | MS.gene54282:intron | 25.0% |
| ! | TCAAAAATAAGTCAATCCAA+AGG | + | chr1.1:10330278-10330297 | MS.gene54282:intron | 25.0% |
| !!! | AATAAACTATTGTTGGTTTC+TGG | + | chr1.1:10330500-10330519 | MS.gene54282:intron | 25.0% |
| !!! | CTGTGTTCATTATTTTTCAT+GGG | + | chr1.1:10330574-10330593 | MS.gene54282:intron | 25.0% |
| !!! | TAAAATGGGTAATTTGCTTT+GGG | + | chr1.1:10333013-10333032 | MS.gene54282:intron | 25.0% |
| !!! | TTAAAATGGGTAATTTGCTT+TGG | + | chr1.1:10333012-10333031 | MS.gene54282:intron | 25.0% |
| AAAAAGGAACATCTAGCAAA+AGG | - | chr1.1:10331954-10331973 | None:intergenic | 30.0% | |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr1.1:10330093-10330112 | None:intergenic | 30.0% | |
| AAAAATTTGGAAATAGGGTC+TGG | + | chr1.1:10330030-10330049 | MS.gene54282:intron | 30.0% | |
| AAAATGTTCCTTGAAAAACC+AGG | - | chr1.1:10332891-10332910 | None:intergenic | 30.0% | |
| AAATGTTCCTTGAAAAACCA+GGG | - | chr1.1:10332890-10332909 | None:intergenic | 30.0% | |
| ACAATTAACAATGTGAACTG+AGG | + | chr1.1:10331047-10331066 | MS.gene54282:intron | 30.0% | |
| ATAACTAACCCATTAGCATA+TGG | - | chr1.1:10332811-10332830 | None:intergenic | 30.0% | |
| ATGAATCAAACAACATCACA+AGG | - | chr1.1:10331466-10331485 | None:intergenic | 30.0% | |
| CAAGGCTCAAATGAAAATAA+AGG | - | chr1.1:10332356-10332375 | None:intergenic | 30.0% | |
| CAGAGATAAGCATAATTCTA+AGG | - | chr1.1:10332565-10332584 | None:intergenic | 30.0% | |
| GACTTAAATATGAAGAGTTG+AGG | - | chr1.1:10330919-10330938 | None:intergenic | 30.0% | |
| GTATGTTCATAAGAAACTTG+GGG | - | chr1.1:10333068-10333087 | None:intergenic | 30.0% | |
| TATATGCAGAAATGGCATTA+GGG | + | chr1.1:10333259-10333278 | MS.gene54282:intron | 30.0% | |
| TCATTTCTCTTATGGTTGTT+AGG | + | chr1.1:10332602-10332621 | MS.gene54282:intron | 30.0% | |
| TCATTTGTATTCTGTGTAAC+AGG | + | chr1.1:10332090-10332109 | MS.gene54282:intron | 30.0% | |
| TTCTCATAAATCTAGTCACA+TGG | + | chr1.1:10332026-10332045 | MS.gene54282:intron | 30.0% | |
| TTGGAATCTTCAATTTCTCA+TGG | + | chr1.1:10330645-10330664 | MS.gene54282:intron | 30.0% | |
| ! | AGGATTATCATATTGGTGTT+AGG | - | chr1.1:10331934-10331953 | None:intergenic | 30.0% |
| ! | GATTGGTGGTTAAATAACTT+CGG | + | chr1.1:10331299-10331318 | MS.gene54282:intron | 30.0% |
| ! | TATCCATGTCATTTCTCTTA+TGG | + | chr1.1:10332594-10332613 | MS.gene54282:intron | 30.0% |
| !! | AGTTGGCATCTTTAAGATTA+AGG | - | chr1.1:10330307-10330326 | None:intergenic | 30.0% |
| !! | GCTGTGTTCATTATTTTTCA+TGG | + | chr1.1:10330573-10330592 | MS.gene54282:intron | 30.0% |
| !! | GTTGGCATCTTTAAGATTAA+GGG | - | chr1.1:10330306-10330325 | None:intergenic | 30.0% |
| !!! | CTTTATTTTCATTTGAGCCT+TGG | + | chr1.1:10332354-10332373 | MS.gene54282:intron | 30.0% |
| !!! | GCAAATTACCCATTTTAACT+TGG | - | chr1.1:10333010-10333029 | None:intergenic | 30.0% |
| !!! | TCATTTTTTCAAAGTATCGC+CGG | - | chr1.1:10331598-10331617 | None:intergenic | 30.0% |
| AAAACATCCACACCATCAAA+AGG | - | chr1.1:10330058-10330077 | None:intergenic | 35.0% | |
| AAACACGAAATTCATCCTCA+AGG | - | chr1.1:10329777-10329796 | None:intergenic | 35.0% | |
| AAACGGGTAACAAAAAAGCT+TGG | - | chr1.1:10331784-10331803 | None:intergenic | 35.0% | |
| AACATCACAAGGCTATATCA+AGG | - | chr1.1:10331455-10331474 | None:intergenic | 35.0% | |
| ACATACTGTCTTCAAACTGA+AGG | - | chr1.1:10331849-10331868 | None:intergenic | 35.0% | |
| ATGTTGTGTTTGCAGTGTTT+GGG | + | chr1.1:10330668-10330687 | MS.gene54282:intron | 35.0% | |
| CAACCATAAGAGAAATGACA+TGG | - | chr1.1:10332600-10332619 | None:intergenic | 35.0% | |
| GAAAACGTCAGTATCAAACA+CGG | + | chr1.1:10331991-10332010 | MS.gene54282:intron | 35.0% | |
| GTATATGCAGAAATGGCATT+AGG | + | chr1.1:10333258-10333277 | MS.gene54282:intron | 35.0% | |
| TGTCTCTACATGAAGTCAAA+GGG | - | chr1.1:10331030-10331049 | None:intergenic | 35.0% | |
| TTCTCTTATGGTTGTTAGGT+TGG | + | chr1.1:10332606-10332625 | MS.gene54282:intron | 35.0% | |
| TTGAAGACAGTATGTTTGCA+GGG | + | chr1.1:10331854-10331873 | MS.gene54282:intron | 35.0% | |
| TTGTCTCTACATGAAGTCAA+AGG | - | chr1.1:10331031-10331050 | None:intergenic | 35.0% | |
| TTTGAAGACAGTATGTTTGC+AGG | + | chr1.1:10331853-10331872 | MS.gene54282:intron | 35.0% | |
| ! | AAGTCAATAAAAGCATAGCC+AGG | - | chr1.1:10330708-10330727 | None:intergenic | 35.0% |
| ! | CTTTCTCACAATTCTAGAAG+TGG | + | chr1.1:10332135-10332154 | MS.gene54282:CDS | 35.0% |
| ! | GAGGATGAATTTCGTGTTTT+TGG | + | chr1.1:10329778-10329797 | MS.gene54282:CDS | 35.0% |
| ! | GATTTGAAGTGTTATGAGTG+TGG | + | chr1.1:10332207-10332226 | MS.gene54282:CDS | 35.0% |
| ! | TCTGATAAGTTTTCGATTGG+TGG | + | chr1.1:10331285-10331304 | MS.gene54282:intron | 35.0% |
| ! | TGCTCTGATAAGTTTTCGAT+TGG | + | chr1.1:10331282-10331301 | MS.gene54282:intron | 35.0% |
| ! | TTTGTTTCTTAGTGCCTGTT+TGG | + | chr1.1:10330076-10330095 | MS.gene54282:intron | 35.0% |
| !! | TACTTACATACTCTGAAGCA+CGG | - | chr1.1:10331669-10331688 | None:intergenic | 35.0% |
| !! | TCTGAGAGTTTTATGAGAAG+CGG | + | chr1.1:10330366-10330385 | MS.gene54282:intron | 35.0% |
| !! | TGCTAGATGTTCCTTTTTCA+AGG | + | chr1.1:10331956-10331975 | MS.gene54282:intron | 35.0% |
| !! | TTGGCACCAATGTTTTATTG+TGG | + | chr1.1:10332387-10332406 | MS.gene54282:intron | 35.0% |
| !!! | GTGTTTTTGGTGTAATTCGA+AGG | + | chr1.1:10329791-10329810 | MS.gene54282:CDS | 35.0% |
| !!! | TTGTTTTTTCACCCCTTTTC+CGG | + | chr1.1:10330873-10330892 | MS.gene54282:intron | 35.0% |
| ACAGTATGTTTGCAGGGTTA+TGG | + | chr1.1:10331860-10331879 | MS.gene54282:intron | 40.0% | |
| GACACAGCTAGGTATTAAAC+AGG | - | chr1.1:10331908-10331927 | None:intergenic | 40.0% | |
| GATGTTGTGTTTGCAGTGTT+TGG | + | chr1.1:10330667-10330686 | MS.gene54282:intron | 40.0% | |
| GCTACACTTCTCTTGCATAA+CGG | + | chr1.1:10331101-10331120 | MS.gene54282:intron | 40.0% | |
| GGGACATATATACAGAACAC+AGG | - | chr1.1:10331249-10331268 | None:intergenic | 40.0% | |
| TCATAAGAAACTTGGGGTCT+TGG | - | chr1.1:10333062-10333081 | None:intergenic | 40.0% | |
| TGAACATATCGACCGGAAAA+GGG | - | chr1.1:10330888-10330907 | None:intergenic | 40.0% | |
| TGATATGGATATGTCGACAC+CGG | + | chr1.1:10331576-10331595 | MS.gene54282:intron | 40.0% | |
| TGCTACTGCAATTAACCTGT+CGG | + | chr1.1:10331209-10331228 | MS.gene54282:intron | 40.0% | |
| TGTCTTCAAACTGAAGGTCT+CGG | - | chr1.1:10331843-10331862 | None:intergenic | 40.0% | |
| TTCTGTGTAACAGGCAAGAA+TGG | + | chr1.1:10332099-10332118 | MS.gene54282:intron | 40.0% | |
| TTCTTAGTGCCTGTTTGGAT+TGG | + | chr1.1:10330081-10330100 | MS.gene54282:intron | 40.0% | |
| ! | AATATAAACGTGTCGGTGTC+GGG | + | chr1.1:10331626-10331645 | MS.gene54282:intron | 40.0% |
| ! | GAATATAAACGTGTCGGTGT+CGG | + | chr1.1:10331625-10331644 | MS.gene54282:intron | 40.0% |
| ! | GTCTTTCTTTTGTATGCACC+AGG | + | chr1.1:10332683-10332702 | MS.gene54282:intron | 40.0% |
| ! | TATCTTCTGCCGCTATCTTT+TGG | + | chr1.1:10333036-10333055 | MS.gene54282:intron | 40.0% |
| ! | TCAATAAAAGCATAGCCAGG+TGG | - | chr1.1:10330705-10330724 | None:intergenic | 40.0% |
| ! | TCTCACAATTCTAGAAGTGG+TGG | + | chr1.1:10332138-10332157 | MS.gene54282:CDS | 40.0% |
| ! | TTTTCCGGTCGATATGTTCA+CGG | + | chr1.1:10330888-10330907 | MS.gene54282:intron | 40.0% |
| !! | CTGAGAGTTTTATGAGAAGC+GGG | + | chr1.1:10330367-10330386 | MS.gene54282:intron | 40.0% |
| !! | TTTAAGATTAAGGGCGCCTT+TGG | - | chr1.1:10330297-10330316 | None:intergenic | 40.0% |
| AAAGCCGTGAACATATCGAC+CGG | - | chr1.1:10330895-10330914 | None:intergenic | 45.0% | |
| AACAGGCAAGAATGGTTGGA+GGG | + | chr1.1:10332107-10332126 | MS.gene54282:intron | 45.0% | |
| ACTGAGGATTTGCACTGCTT+TGG | + | chr1.1:10331063-10331082 | MS.gene54282:intron | 45.0% | |
| CACTGGACACAACACTGATA+TGG | + | chr1.1:10331561-10331580 | MS.gene54282:intron | 45.0% | |
| CTGAGGATTTGCACTGCTTT+GGG | + | chr1.1:10331064-10331083 | MS.gene54282:intron | 45.0% | |
| GAACATATCGACCGGAAAAG+GGG | - | chr1.1:10330887-10330906 | None:intergenic | 45.0% | |
| GATGCTATACGCGATCTAGA+TGG | + | chr1.1:10330750-10330769 | MS.gene54282:CDS | 45.0% | |
| GTGAACATATCGACCGGAAA+AGG | - | chr1.1:10330889-10330908 | None:intergenic | 45.0% | |
| GTGCCAATACAATTGCACCA+AGG | - | chr1.1:10332374-10332393 | None:intergenic | 45.0% | |
| GTGTAACAGGCAAGAATGGT+TGG | + | chr1.1:10332103-10332122 | MS.gene54282:intron | 45.0% | |
| GTGTTAGGTTTGACACAGCT+AGG | - | chr1.1:10331919-10331938 | None:intergenic | 45.0% | |
| GTTATGGGCGAAGGTTAGAT+TGG | + | chr1.1:10332328-10332347 | MS.gene54282:intron | 45.0% | |
| TAACAGGCAAGAATGGTTGG+AGG | + | chr1.1:10332106-10332125 | MS.gene54282:intron | 45.0% | |
| TCTAACCTTCGCCCATAACT+TGG | - | chr1.1:10332327-10332346 | None:intergenic | 45.0% | |
| TGAGGATTTGCACTGCTTTG+GGG | + | chr1.1:10331065-10331084 | MS.gene54282:intron | 45.0% | |
| TGCGACATTCACGAGCAAAA+TGG | - | chr1.1:10332242-10332261 | None:intergenic | 45.0% | |
| TGTTATGAGTGTGGTGAACC+TGG | + | chr1.1:10332216-10332235 | MS.gene54282:CDS | 45.0% | |
| TTCGCAGGAGTCCAAGTTAT+GGG | + | chr1.1:10332313-10332332 | MS.gene54282:CDS | 45.0% | |
| TTTCGCAGGAGTCCAAGTTA+TGG | + | chr1.1:10332312-10332331 | MS.gene54282:CDS | 45.0% | |
| ! | CACAATTCTAGAAGTGGTGG+TGG | + | chr1.1:10332141-10332160 | MS.gene54282:CDS | 45.0% |
| ! | CAGAGCACAATTTGCTCAGA+GGG | - | chr1.1:10331269-10331288 | None:intergenic | 45.0% |
| ! | GAGCCTTGGTGCAATTGTAT+TGG | + | chr1.1:10332368-10332387 | MS.gene54282:intron | 45.0% |
| ! | TCAGAGCACAATTTGCTCAG+AGG | - | chr1.1:10331270-10331289 | None:intergenic | 45.0% |
| !! | AATTCTAGAAGTGGTGGTGG+CGG | + | chr1.1:10332144-10332163 | MS.gene54282:CDS | 45.0% |
| !! | AGGAGGTGCCATATGCTAAT+GGG | + | chr1.1:10332800-10332819 | MS.gene54282:CDS | 45.0% |
| !! | GGATTCTAGAGTCTCAGAGA+GGG | + | chr1.1:10329750-10329769 | MS.gene54282:CDS | 45.0% |
| !! | TGGATTCTAGAGTCTCAGAG+AGG | + | chr1.1:10329749-10329768 | MS.gene54282:CDS | 45.0% |
| CATTCACGAGCAAAATGGCC+AGG | - | chr1.1:10332237-10332256 | None:intergenic | 50.0% | |
| GGGTCTTGGCCAAAAGATAG+CGG | - | chr1.1:10333048-10333067 | None:intergenic | 50.0% | |
| GTGTAAGCTGTTCGCAGACA+TGG | + | chr1.1:10331537-10331556 | MS.gene54282:intron | 50.0% | |
| TAGCATCCTGTGCATCTCTG+CGG | - | chr1.1:10330737-10330756 | None:intergenic | 50.0% | |
| TCGTGTGTACGTGGGTAATC+TGG | + | chr1.1:10329729-10329748 | MS.gene54282:CDS | 50.0% | |
| TGCTACTGCAATTAACCCGC+CGG | + | chr1.1:10331143-10331162 | MS.gene54282:intron | 50.0% | |
| ! | ATGCAAGAGAAGTGTAGCGC+CGG | - | chr1.1:10331165-10331184 | None:intergenic | 50.0% |
| ! | TAGGGTCTGGTGCCTTTTGA+TGG | + | chr1.1:10330043-10330062 | MS.gene54282:intron | 50.0% |
| !! | ATGAGAAGCGGGTTAGTGAG+TGG | + | chr1.1:10330378-10330397 | MS.gene54282:intron | 50.0% |
| !! | GAGGAGGTGCCATATGCTAA+TGG | + | chr1.1:10332799-10332818 | MS.gene54282:CDS | 50.0% |
| !! | TGAGAAGCGGGTTAGTGAGT+GGG | + | chr1.1:10330379-10330398 | MS.gene54282:intron | 50.0% |
| !! | TGGACAGCCCTGGTTTTTCA+AGG | + | chr1.1:10332880-10332899 | MS.gene54282:intron | 50.0% |
| !!! | TCTGGTGCCTTTTGATGGTG+TGG | + | chr1.1:10330048-10330067 | MS.gene54282:intron | 50.0% |
| ACCAGGAGTTACAGTCCTCG+TGG | + | chr1.1:10332700-10332719 | MS.gene54282:intron | 55.0% | |
| AGTCTCAGAGAGGGACCTTG+AGG | + | chr1.1:10329759-10329778 | MS.gene54282:CDS | 55.0% | |
| CCAGGAGTTACAGTCCTCGT+GGG | + | chr1.1:10332701-10332720 | MS.gene54282:intron | 55.0% | |
| CGTGAATGTCGCAATCGTGG+TGG | + | chr1.1:10332249-10332268 | MS.gene54282:CDS | 55.0% | |
| CTGTTCGCAGACATGGACAC+TGG | + | chr1.1:10331544-10331563 | MS.gene54282:intron | 55.0% | |
| CTTGGACTCCTGCGAAATCG+AGG | - | chr1.1:10332309-10332328 | None:intergenic | 55.0% | |
| GAACACAGGCAGCACTCACA+TGG | - | chr1.1:10331235-10331254 | None:intergenic | 55.0% | |
| GAATGTCGCAATCGTGGTGG+TGG | + | chr1.1:10332252-10332271 | MS.gene54282:CDS | 55.0% | |
| GCTCGTGAATGTCGCAATCG+TGG | + | chr1.1:10332246-10332265 | MS.gene54282:CDS | 55.0% | |
| GGAGTCCAAGTTATGGGCGA+AGG | + | chr1.1:10332319-10332338 | MS.gene54282:CDS | 55.0% | |
| TGATGACCGCAGAGATGCAC+AGG | + | chr1.1:10330728-10330747 | MS.gene54282:CDS | 55.0% | |
| TGCAAGCAGCTCTGCAGTAG+TGG | + | chr1.1:10330966-10330985 | MS.gene54282:intron | 55.0% | |
| TGTCGCTATTTGGACAGCCC+TGG | + | chr1.1:10332870-10332889 | MS.gene54282:intron | 55.0% | |
| ! | GCACGGACACCTCTAGGAAT+AGG | - | chr1.1:10331652-10331671 | None:intergenic | 55.0% |
| ! | TCTGAAGCACGGACACCTCT+AGG | - | chr1.1:10331658-10331677 | None:intergenic | 55.0% |
| !! | TGCGAAATCGAGGTGGACTG+CGG | - | chr1.1:10332299-10332318 | None:intergenic | 55.0% |
| AGGTCACCACCTCCTTACCG+TGG | + | chr1.1:10332772-10332791 | MS.gene54282:CDS | 60.0% | |
| CCCACGAGGACTGTAACTCC+TGG | - | chr1.1:10332704-10332723 | None:intergenic | 60.0% | |
| CTCGTGGACGTAGCTACAGC+AGG | + | chr1.1:10332752-10332771 | MS.gene54282:CDS | 60.0% | |
| CTGCTGTAGCTACGTCCACG+AGG | - | chr1.1:10332754-10332773 | None:intergenic | 60.0% | |
| GCAGTCCACCTCGATTTCGC+AGG | + | chr1.1:10332298-10332317 | MS.gene54282:CDS | 60.0% | |
| GGACTCCTGCGAAATCGAGG+TGG | - | chr1.1:10332306-10332325 | None:intergenic | 60.0% | |
| GGAGTTACAGTCCTCGTGGG+CGG | + | chr1.1:10332704-10332723 | MS.gene54282:intron | 60.0% | |
| GGTCACCACCTCCTTACCGT+GGG | + | chr1.1:10332773-10332792 | MS.gene54282:CDS | 60.0% | |
| TGGGTTGCTCGAAGACCACC+TGG | + | chr1.1:10330687-10330706 | MS.gene54282:CDS | 60.0% | |
| ! | CAAGAGAAGTGTAGCGCCGG+CGG | - | chr1.1:10331162-10331181 | None:intergenic | 60.0% |
| ! | GGTGTCGGGCCTATTCCTAG+AGG | + | chr1.1:10331640-10331659 | MS.gene54282:intron | 60.0% |
| !! | AAGAGAAGTGTAGCGCCGGC+GGG | - | chr1.1:10331161-10331180 | None:intergenic | 60.0% |
| !! | AATCGTGGTGGTGGTGGTGC+AGG | + | chr1.1:10332261-10332280 | MS.gene54282:CDS | 60.0% |
| !! | ATCGAGGTGGACTGCGGCTA+CGG | - | chr1.1:10332293-10332312 | None:intergenic | 60.0% |
| !! | TCTAGAAGTGGTGGTGGCGG+CGG | + | chr1.1:10332147-10332166 | MS.gene54282:CDS | 60.0% |
| !! | TGTCGCAATCGTGGTGGTGG+TGG | + | chr1.1:10332255-10332274 | MS.gene54282:CDS | 60.0% |
| ACCTCCTCACGCCCACGGTA+AGG | - | chr1.1:10332787-10332806 | None:intergenic | 65.0% | |
| ACCTCCTTACCGTGGGCGTG+AGG | + | chr1.1:10332780-10332799 | MS.gene54282:CDS | 65.0% | |
| ATGGCACCTCCTCACGCCCA+CGG | - | chr1.1:10332792-10332811 | None:intergenic | 65.0% | |
| GCAGCACTCACATGGCCGAC+AGG | - | chr1.1:10331227-10331246 | None:intergenic | 65.0% | |
| GTCCACGAGGTGACACGCTG+CGG | - | chr1.1:10332741-10332760 | None:intergenic | 65.0% | |
| TCACGCCCACGGTAAGGAGG+TGG | - | chr1.1:10332781-10332800 | None:intergenic | 65.0% | |
| TCCTCACGCCCACGGTAAGG+AGG | - | chr1.1:10332784-10332803 | None:intergenic | 65.0% | |
| TCCTTACCGTGGGCGTGAGG+AGG | + | chr1.1:10332783-10332802 | MS.gene54282:CDS | 65.0% | |
| GGTGGAGGTCGTGGTCGTGG+CGG | + | chr1.1:10332174-10332193 | MS.gene54282:CDS | 70.0% | |
| !! | AGAAGTGGTGGTGGCGGCGG+CGG | + | chr1.1:10332150-10332169 | MS.gene54282:CDS | 70.0% |
| !! | GGTGGTGGAGGTCGTGGTCG+TGG | + | chr1.1:10332171-10332190 | MS.gene54282:CDS | 70.0% |
| AGGTGACACGCTGCGGCGCC+TGG | - | chr1.1:10332734-10332753 | None:intergenic | 75.0% | |
| CGCCGCAGCGTGTCACCTCG+TGG | + | chr1.1:10332736-10332755 | MS.gene54282:CDS | 75.0% | |
| GGAGGTCGTGGTCGTGGCGG+CGG | + | chr1.1:10332177-10332196 | MS.gene54282:CDS | 75.0% | |
| GGTGACACGCTGCGGCGCCT+GGG | - | chr1.1:10332733-10332752 | None:intergenic | 75.0% | |
| GTGACACGCTGCGGCGCCTG+GGG | - | chr1.1:10332732-10332751 | None:intergenic | 75.0% | |
| TGACACGCTGCGGCGCCTGG+GGG | - | chr1.1:10332731-10332750 | None:intergenic | 75.0% | |
| ! | GGTCGTGGTCGTGGCGGCGG+CGG | + | chr1.1:10332180-10332199 | MS.gene54282:CDS | 80.0% |
| ! | GTCCTCGTGGGCGGTCCCCC+AGG | + | chr1.1:10332713-10332732 | MS.gene54282:CDS | 80.0% |
| !!! | AGTGGTGGTGGCGGCGGCGG+TGG | + | chr1.1:10332153-10332172 | MS.gene54282:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGTCG+TGG | + | chr1.1:10332165-10332184 | MS.gene54282:CDS | 80.0% |
| ! | CGCCTGGGGGACCGCCCACG+AGG | - | chr1.1:10332718-10332737 | None:intergenic | 85.0% |
| !! | GGTGGCGGCGGCGGTGGTGG+AGG | + | chr1.1:10332159-10332178 | MS.gene54282:CDS | 85.0% |
| !!! | GGTGGTGGCGGCGGCGGTGG+TGG | + | chr1.1:10332156-10332175 | MS.gene54282:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 10329724 | 10333304 | 10329724 | ID=MS.gene54282 |
| chr1.1 | mRNA | 10329724 | 10333304 | 10329724 | ID=MS.gene54282.t1;Parent=MS.gene54282 |
| chr1.1 | exon | 10329724 | 10329812 | 10329724 | ID=MS.gene54282.t1.exon1;Parent=MS.gene54282.t1 |
| chr1.1 | CDS | 10329724 | 10329812 | 10329724 | ID=cds.MS.gene54282.t1;Parent=MS.gene54282.t1 |
| chr1.1 | exon | 10330683 | 10330771 | 10330683 | ID=MS.gene54282.t1.exon2;Parent=MS.gene54282.t1 |
| chr1.1 | CDS | 10330683 | 10330771 | 10330683 | ID=cds.MS.gene54282.t1;Parent=MS.gene54282.t1 |
| chr1.1 | exon | 10332112 | 10332340 | 10332112 | ID=MS.gene54282.t1.exon3;Parent=MS.gene54282.t1 |
| chr1.1 | CDS | 10332112 | 10332340 | 10332112 | ID=cds.MS.gene54282.t1;Parent=MS.gene54282.t1 |
| chr1.1 | exon | 10332705 | 10332821 | 10332705 | ID=MS.gene54282.t1.exon4;Parent=MS.gene54282.t1 |
| chr1.1 | CDS | 10332705 | 10332821 | 10332705 | ID=cds.MS.gene54282.t1;Parent=MS.gene54282.t1 |
| chr1.1 | exon | 10333268 | 10333304 | 10333268 | ID=MS.gene54282.t1.exon5;Parent=MS.gene54282.t1 |
| chr1.1 | CDS | 10333268 | 10333304 | 10333268 | ID=cds.MS.gene54282.t1;Parent=MS.gene54282.t1 |
| Gene Sequence |
| Protein sequence |
