Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59676.t1 | XP_003614503.2 | 98.4 | 486 | 8 | 0 | 1 | 486 | 6 | 491 | 3.70E-270 | 940.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59676.t1 | Q869R1 | 25.9 | 441 | 297 | 10 | 32 | 461 | 134 | 555 | 3.7e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59676.t1 | G7JYE2 | 98.4 | 486 | 8 | 0 | 1 | 486 | 6 | 491 | 2.6e-270 | 940.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene59676 | 0.809372 | 1.95E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene59676 | 0.861732 | 8.35E-64 | -1.69E-46 |
| MS.gene049821 | MS.gene59676 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene59676 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene59676 | 0.83637 | 9.74E-57 | -1.69E-46 |
| MS.gene050273 | MS.gene59676 | 0.81085 | 9.39E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene59676 | 0.867294 | 1.52E-65 | -1.69E-46 |
| MS.gene050808 | MS.gene59676 | 0.828319 | 9.60E-55 | -1.69E-46 |
| MS.gene050826 | MS.gene59676 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene59676 | 0.819949 | 8.88E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene59676 | 0.802213 | 6.24E-49 | -1.69E-46 |
| MS.gene051577 | MS.gene59676 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene59676 | 0.835821 | 1.34E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene59676 | 0.836085 | 1.15E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene59676 | 0.837357 | 5.45E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene59676 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene59676 | 0.848524 | 5.80E-60 | -1.69E-46 |
| MS.gene052863 | MS.gene59676 | 0.80271 | 4.93E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene59676 | 0.817419 | 3.33E-52 | -1.69E-46 |
| MS.gene053565 | MS.gene59676 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene59676 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene053894 | MS.gene59676 | 0.907344 | 5.61E-81 | -1.69E-46 |
| MS.gene054559 | MS.gene59676 | 0.807743 | 4.35E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene59676 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene59676 | 0.807074 | 6.04E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene59676 | 0.818049 | 2.40E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene59676 | 0.810324 | 1.22E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene59676 | 0.820561 | 6.43E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene59676 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene59676 | 0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene59676 | 0.831949 | 1.25E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene59676 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene59676 | 0.828948 | 6.77E-55 | -1.69E-46 |
| MS.gene057287 | MS.gene59676 | 0.811729 | 6.05E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene59676 | 0.828589 | 8.27E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene59676 | 0.809273 | 2.05E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene59676 | 0.828974 | 6.67E-55 | -1.69E-46 |
| MS.gene058636 | MS.gene59676 | 0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene59676 | 0.831116 | 2.00E-55 | -1.69E-46 |
| MS.gene059937 | MS.gene59676 | 0.809902 | 1.50E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene59676 | 0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene060480 | MS.gene59676 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene59676 | 0.847643 | 1.02E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59676.t1 | MTR_5g054780 | 98.354 | 486 | 8 | 0 | 1 | 486 | 6 | 491 | 0.0 | 982 |
| MS.gene59676.t1 | MTR_1g111330 | 82.937 | 463 | 76 | 1 | 24 | 486 | 35 | 494 | 0.0 | 749 |
| MS.gene59676.t1 | MTR_1g111330 | 82.650 | 317 | 55 | 0 | 24 | 340 | 35 | 351 | 8.96e-179 | 505 |
| MS.gene59676.t1 | MTR_4g108910 | 70.068 | 147 | 28 | 2 | 340 | 486 | 2 | 132 | 2.20e-61 | 197 |
| MS.gene59676.t1 | MTR_3g033520 | 28.571 | 308 | 182 | 7 | 145 | 440 | 261 | 542 | 4.16e-30 | 124 |
| MS.gene59676.t1 | MTR_3g033520 | 28.571 | 308 | 182 | 7 | 145 | 440 | 242 | 523 | 4.32e-30 | 123 |
| MS.gene59676.t1 | MTR_7g086710 | 25.551 | 454 | 295 | 11 | 20 | 466 | 32 | 449 | 1.01e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59676.t1 | AT1G25500 | 73.895 | 475 | 118 | 3 | 3 | 474 | 15 | 486 | 0.0 | 677 |
| MS.gene59676.t1 | AT1G25500 | 78.398 | 412 | 88 | 1 | 64 | 474 | 17 | 428 | 0.0 | 625 |
| MS.gene59676.t1 | AT1G25500 | 80.528 | 303 | 58 | 1 | 116 | 417 | 1 | 303 | 3.00e-170 | 481 |
| MS.gene59676.t1 | AT5G13760 | 28.041 | 296 | 199 | 3 | 145 | 440 | 252 | 533 | 4.65e-31 | 126 |
| MS.gene59676.t1 | AT3G04440 | 25.871 | 402 | 273 | 10 | 87 | 480 | 94 | 478 | 8.24e-20 | 92.4 |
| MS.gene59676.t1 | AT3G04440 | 25.871 | 402 | 273 | 10 | 87 | 480 | 71 | 455 | 9.17e-20 | 92.0 |
| MS.gene59676.t1 | AT3G03700 | 25.871 | 402 | 273 | 10 | 87 | 480 | 94 | 478 | 9.89e-20 | 92.4 |
Find 120 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTCTGTAAGCTTATTT+TGG | 0.132127 | 5.4:+43331848 | MS.gene59676:CDS |
| GAGAGTCGCATATGCGTTTA+TGG | 0.163908 | 5.4:+43331606 | MS.gene59676:CDS |
| CCTTTGAAGATTGGTGTTTA+TGG | 0.194371 | 5.4:+43332423 | MS.gene59676:intron |
| TTATGGCTGTCATGCTCTTA+TGG | 0.229988 | 5.4:+43331623 | MS.gene59676:CDS |
| TTCAGGTGCTGTGCTGTTAA+TGG | 0.262803 | 5.4:+43332527 | MS.gene59676:CDS |
| TGCAGAACCAACATTGTAAA+TGG | 0.266173 | 5.4:-43331544 | None:intergenic |
| AGTTATCAGCCCACCTAAAA+TGG | 0.267123 | 5.4:-43332553 | None:intergenic |
| TTGTGATTCTTGGCGTTAAC+AGG | 0.271164 | 5.4:+43329572 | MS.gene59676:CDS |
| CTGGAACTTGCTCTGGTGTT+TGG | 0.293203 | 5.4:+43332574 | MS.gene59676:CDS |
| GGCGTTGGCACGATGTATTC+TGG | 0.294547 | 5.4:+43329506 | MS.gene59676:CDS |
| CTGGTTTGACAGAGGATTAC+TGG | 0.297174 | 5.4:+43329656 | MS.gene59676:CDS |
| TCCCATCTCTGAATCAATAA+TGG | 0.300289 | 5.4:-43333105 | None:intergenic |
| CATTATTCACAGCTGCTATT+AGG | 0.318508 | 5.4:+43332034 | MS.gene59676:CDS |
| TGGAACTTGCTCTGGTGTTT+GGG | 0.323340 | 5.4:+43332575 | MS.gene59676:CDS |
| TTTGATTCGTTTCAGATAAG+AGG | 0.327931 | 5.4:+43332154 | MS.gene59676:intron |
| CAAGATAAGTGGTAAGAATA+TGG | 0.340491 | 5.4:-43329777 | None:intergenic |
| TATGCTCATGGGCATGATAT+TGG | 0.343150 | 5.4:+43332644 | MS.gene59676:CDS |
| TATGCTGTCGCTGGCGGCGT+TGG | 0.349719 | 5.4:+43329685 | MS.gene59676:CDS |
| ATGCTGTCGCTGGCGGCGTT+GGG | 0.354756 | 5.4:+43329686 | MS.gene59676:CDS |
| TTCCGCATAACAGATATATA+TGG | 0.362458 | 5.4:-43333079 | None:intergenic |
| GTGCTTCAACTCCCGTTGAT+TGG | 0.366711 | 5.4:-43332488 | None:intergenic |
| TATGCTTTAACAACATCTTT+TGG | 0.373372 | 5.4:+43331994 | MS.gene59676:CDS |
| GGCGGCGTTGGGACTGCTCT+TGG | 0.380288 | 5.4:+43329697 | MS.gene59676:CDS |
| TACAATGTTGGTTCTGCAAA+AGG | 0.380351 | 5.4:+43331549 | MS.gene59676:CDS |
| GGTGCAATGTTTCGGAAATC+TGG | 0.390267 | 5.4:-43333143 | None:intergenic |
| ATGGAGTTGGTTGTTGCTGT+TGG | 0.393555 | 5.4:+43329720 | MS.gene59676:CDS |
| TCAGGTGCTGTGCTGTTAAT+GGG | 0.404479 | 5.4:+43332528 | MS.gene59676:CDS |
| ACAGTACATGTCATAGTGTC+TGG | 0.405736 | 5.4:+43331892 | MS.gene59676:CDS |
| AAGTCGCTGGTGCAATGTTT+CGG | 0.405815 | 5.4:-43333151 | None:intergenic |
| CAAAACCCACGCCAATCAAC+TGG | 0.407766 | 5.4:-43329546 | None:intergenic |
| CTTGCTCTGGTGTTTGGGCA+TGG | 0.410854 | 5.4:+43332580 | MS.gene59676:CDS |
| TTGCGAGGCTGCATCAGTTC+CGG | 0.412997 | 5.4:+43331945 | MS.gene59676:CDS |
| CTATTTGTGATCCAGTTGAT+TGG | 0.417906 | 5.4:+43329535 | MS.gene59676:CDS |
| TACCTGATTGTTGGTGGCAG+TGG | 0.431092 | 5.4:-43329334 | None:intergenic |
| ACCGTTCTGCAAGAGATGCC+TGG | 0.432100 | 5.4:+43332457 | MS.gene59676:CDS |
| CCCATCTCTGAATCAATAAT+GGG | 0.437239 | 5.4:-43333104 | None:intergenic |
| TTAACTTAGTACCTGATTGT+TGG | 0.439199 | 5.4:-43329343 | None:intergenic |
| TGTCATAGTGTCTGGGTCAC+TGG | 0.440313 | 5.4:+43331900 | MS.gene59676:CDS |
| CTGATAACTGGAACTTGCTC+TGG | 0.440852 | 5.4:+43332567 | MS.gene59676:CDS |
| GGACTGCTCTTGGATGGAGT+TGG | 0.442052 | 5.4:+43329707 | MS.gene59676:CDS |
| TGGAGTTGGTTGTTGCTGTT+GGG | 0.445429 | 5.4:+43329721 | MS.gene59676:CDS |
| AGAGGAATCCGGTCAAAGAT+AGG | 0.447023 | 5.4:+43332172 | MS.gene59676:CDS |
| CAGACTTCCATTTACAATGT+TGG | 0.448036 | 5.4:+43331537 | MS.gene59676:intron |
| ATACTGTAAAGATTTCATTA+TGG | 0.449302 | 5.4:-43331974 | None:intergenic |
| ATCTTGTGGAGACTCTTGTC+AGG | 0.452670 | 5.4:+43332236 | MS.gene59676:CDS |
| CATTCTTGCCTATCTTTGAC+CGG | 0.452929 | 5.4:-43332180 | None:intergenic |
| TAAGTACACATACCGGTTCA+TGG | 0.454440 | 5.4:+43329624 | MS.gene59676:CDS |
| GGACAGACACCTTCATCATC+TGG | 0.455412 | 5.4:-43329756 | None:intergenic |
| ACAATATGCAGGGAATGTAT+AGG | 0.458422 | 5.4:+43329434 | MS.gene59676:intron |
| GGTTGGAGCGGCAATGGTTG+TGG | 0.459158 | 5.4:+43333038 | MS.gene59676:intron |
| TGGATGGCATTGTGGTCATT+CGG | 0.462885 | 5.4:+43331643 | MS.gene59676:CDS |
| GTGTTTGGGCATGGATGAAA+TGG | 0.463121 | 5.4:+43332589 | MS.gene59676:CDS |
| TTGTGGTCATTCGGAGCTGC+TGG | 0.465748 | 5.4:+43331652 | MS.gene59676:CDS |
| CTTGTGGCGTATGATTGTTC+AGG | 0.468254 | 5.4:+43332510 | MS.gene59676:CDS |
| CTGGTTCGTGTTAGTATCCA+TGG | 0.469444 | 5.4:+43331919 | MS.gene59676:CDS |
| ATATCATATCTGTCGTAGAT+AGG | 0.475748 | 5.4:+43329884 | MS.gene59676:CDS |
| GCGTTGGGACTGCTCTTGGA+TGG | 0.476999 | 5.4:+43329701 | MS.gene59676:CDS |
| CGTTTCAGATAAGAGGAATC+CGG | 0.479860 | 5.4:+43332161 | MS.gene59676:intron |
| CCCATTATTGATTCAGAGAT+GGG | 0.480499 | 5.4:+43333104 | MS.gene59676:CDS |
| TTCCACTGCCACCAACAATC+AGG | 0.481194 | 5.4:+43329332 | MS.gene59676:CDS |
| GATTTCATTATGGAGTTAGC+CGG | 0.484194 | 5.4:-43331964 | None:intergenic |
| TGGGAGTTATTCCAATCAAC+GGG | 0.488654 | 5.4:+43332477 | MS.gene59676:CDS |
| AGCTCCTATGTTGAAGTCGC+TGG | 0.491841 | 5.4:-43333164 | None:intergenic |
| TGCTATTAGGACACTGCGAT+GGG | 0.492171 | 5.4:+43332047 | MS.gene59676:CDS |
| TGGATCTACATCTATGCTCA+TGG | 0.499343 | 5.4:+43332632 | MS.gene59676:CDS |
| CAGCCTCATTCTCCATGAAC+CGG | 0.500911 | 5.4:-43329636 | None:intergenic |
| AACATAGGAGCTCGCGTGCA+AGG | 0.501996 | 5.4:+43333175 | MS.gene59676:CDS |
| ACCCATTATTGATTCAGAGA+TGG | 0.503313 | 5.4:+43333103 | MS.gene59676:CDS |
| TGGCCACTCTATGCTGTCGC+TGG | 0.505383 | 5.4:+43329676 | MS.gene59676:CDS |
| GGCTGTCATGCTCTTATGGA+TGG | 0.510990 | 5.4:+43331627 | MS.gene59676:CDS |
| GAGTCTCCACAAGATGGAAA+AGG | 0.511964 | 5.4:-43332228 | None:intergenic |
| CAGGGAATGTATAGGAAAAG+TGG | 0.517214 | 5.4:+43329442 | MS.gene59676:intron |
| CGGTTCATGGAGAATGAGGC+TGG | 0.521053 | 5.4:+43329637 | MS.gene59676:CDS |
| TCTGCAAAAGGCTGTTAAGA+TGG | 0.525636 | 5.4:+43331561 | MS.gene59676:CDS |
| CATCAGTGAAGTGGTGAACA+TGG | 0.529486 | 5.4:+43329474 | MS.gene59676:CDS |
| CCGTTCTGCAAGAGATGCCT+GGG | 0.531018 | 5.4:+43332458 | MS.gene59676:CDS |
| AAAAGGCTGTTAAGATGGTA+TGG | 0.531876 | 5.4:+43331566 | MS.gene59676:CDS |
| TATGCGACTCTCATAACCTC+TGG | 0.532254 | 5.4:-43331595 | None:intergenic |
| CGTTGATTGGAATAACTCCC+AGG | 0.536301 | 5.4:-43332475 | None:intergenic |
| CTGCTATTAGGACACTGCGA+TGG | 0.551628 | 5.4:+43332046 | MS.gene59676:CDS |
| ACTTAGTACCTGATTGTTGG+TGG | 0.551958 | 5.4:-43329340 | None:intergenic |
| ACTGATCACAGCAAGATAAG+TGG | 0.552209 | 5.4:-43329788 | None:intergenic |
| TGCTCTTATGGATGGCATTG+TGG | 0.555214 | 5.4:+43331635 | MS.gene59676:CDS |
| TGCACCAGCGACTTCAACAT+AGG | 0.555754 | 5.4:+43333160 | MS.gene59676:CDS |
| TGGACGCTGGTGGCTTCTTG+TGG | 0.560110 | 5.4:+43331702 | MS.gene59676:CDS |
| TGACAAGAGTCTCCACAAGA+TGG | 0.562607 | 5.4:-43332234 | None:intergenic |
| TACGAGAATCAAGGTGATCG+TGG | 0.569177 | 5.4:-43333209 | None:intergenic |
| GTGATCCAGTTGATTGGCGT+GGG | 0.570702 | 5.4:+43329541 | MS.gene59676:CDS |
| TGGTGTTGTAGCTTCAAGCA+TGG | 0.572102 | 5.4:+43331672 | MS.gene59676:CDS |
| GCGCGCAATCCAGATGATGA+AGG | 0.572957 | 5.4:+43329747 | MS.gene59676:CDS |
| AACGGGAGTTGAAGCACTTG+TGG | 0.573101 | 5.4:+43332494 | MS.gene59676:CDS |
| GCATGGGTGACGGTGGACGC+TGG | 0.573897 | 5.4:+43331689 | MS.gene59676:CDS |
| CAGTACATGTCATAGTGTCT+GGG | 0.574385 | 5.4:+43331893 | MS.gene59676:CDS |
| TAACAAGTATGCGTATGTCC+AGG | 0.584550 | 5.4:+43332264 | MS.gene59676:CDS |
| CTGGGAGTTATTCCAATCAA+CGG | 0.586139 | 5.4:+43332476 | MS.gene59676:CDS |
| GGATCTACATCTATGCTCAT+GGG | 0.586213 | 5.4:+43332633 | MS.gene59676:CDS |
| ACATAGGAGCTCGCGTGCAA+GGG | 0.586817 | 5.4:+43333176 | MS.gene59676:CDS |
| GGTGTTGTAGCTTCAAGCAT+GGG | 0.590967 | 5.4:+43331673 | MS.gene59676:CDS |
| TGTGATCCAGTTGATTGGCG+TGG | 0.597398 | 5.4:+43329540 | MS.gene59676:CDS |
| ATACCGGTTCATGGAGAATG+AGG | 0.598459 | 5.4:+43329633 | MS.gene59676:CDS |
| CCCAGGCATCTCTTGCAGAA+CGG | 0.598895 | 5.4:-43332458 | None:intergenic |
| CCACTCTATGCTGTCGCTGG+CGG | 0.608339 | 5.4:+43329679 | MS.gene59676:CDS |
| TGGAGCGGCAATGGTTGTGG+TGG | 0.610073 | 5.4:+43333041 | MS.gene59676:CDS |
| TTTCTGGTATACGAGAATCA+AGG | 0.610752 | 5.4:-43333218 | None:intergenic |
| ATCCATATATATCTGTTATG+CGG | 0.615901 | 5.4:+43333077 | MS.gene59676:CDS |
| TGGGTGACGGTGGACGCTGG+TGG | 0.621108 | 5.4:+43331692 | MS.gene59676:CDS |
| ATGCAGCCTCGCAACCACCA+TGG | 0.625809 | 5.4:-43331936 | None:intergenic |
| CAACAACAACATCAGTGAAG+TGG | 0.626519 | 5.4:+43329465 | MS.gene59676:CDS |
| ACGAGAATCAAGGTGATCGT+GGG | 0.626896 | 5.4:-43333208 | None:intergenic |
| ACATTGATAAGTACACATAC+CGG | 0.628897 | 5.4:+43329617 | MS.gene59676:CDS |
| GAATGAGGCTGGTTTGACAG+AGG | 0.635745 | 5.4:+43329648 | MS.gene59676:CDS |
| CCGCCAGCGACAGCATAGAG+TGG | 0.636241 | 5.4:-43329679 | None:intergenic |
| TATTAGGACACTGCGATGGG+AGG | 0.654899 | 5.4:+43332050 | MS.gene59676:CDS |
| TAGTATCCATGGTGGTTGCG+AGG | 0.664174 | 5.4:+43331930 | MS.gene59676:CDS |
| GCTTCAAGCATGGGTGACGG+TGG | 0.664433 | 5.4:+43331682 | MS.gene59676:CDS |
| GTAGCTTCAAGCATGGGTGA+CGG | 0.668366 | 5.4:+43331679 | MS.gene59676:CDS |
| GATGGTATGGAATCTTCCAG+AGG | 0.689240 | 5.4:+43331579 | MS.gene59676:CDS |
| TGTTAACGCCAAGAATCACA+AGG | 0.715028 | 5.4:-43329570 | None:intergenic |
| TCCAAAATAAGCTTACAGAG+AGG | 0.747140 | 5.4:-43331849 | None:intergenic |
| GTTCGTGTTAGTATCCATGG+TGG | 0.768648 | 5.4:+43331922 | MS.gene59676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCTACAATATATATT+TGG | + | chr5.4:43331150-43331169 | MS.gene59676:intron | 10.0% |
| !!! | TATATATTGTAGAATAATTT+TGG | - | chr5.4:43331148-43331167 | None:intergenic | 10.0% |
| !!! | TTTGCTATATATAATTATTT+TGG | + | chr5.4:43331471-43331490 | MS.gene59676:intron | 10.0% |
| !! | AATAAATCAATTCATGTATT+GGG | - | chr5.4:43330668-43330687 | None:intergenic | 15.0% |
| !! | AATTATATATAGCAAATAGA+AGG | - | chr5.4:43331467-43331486 | None:intergenic | 15.0% |
| !! | ATTATATATAGCAAATAGAA+GGG | - | chr5.4:43331466-43331485 | None:intergenic | 15.0% |
| !! | TAATAAATCAATTCATGTAT+TGG | - | chr5.4:43330669-43330688 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAAAAATCA+AGG | - | chr5.4:43332684-43332703 | None:intergenic | 15.0% |
| !! | TCAAATAAATCAATTCAAAT+AGG | + | chr5.4:43330258-43330277 | MS.gene59676:intron | 15.0% |
| !! | AAAGTAATAAAAAATCAAGG+AGG | - | chr5.4:43332681-43332700 | None:intergenic | 20.0% |
| !! | ATACTGTAAAGATTTCATTA+TGG | - | chr5.4:43331977-43331996 | None:intergenic | 20.0% |
| !! | GTTGTACTTAGATATAAATT+AGG | + | chr5.4:43330861-43330880 | MS.gene59676:intron | 20.0% |
| !! | TTTAAGTAAACAAATCAAAC+AGG | - | chr5.4:43330506-43330525 | None:intergenic | 20.0% |
| !!! | AATAACTTTAGGTTTTGTTT+GGG | + | chr5.4:43330953-43330972 | MS.gene59676:intron | 20.0% |
| !!! | ATATTGTAGAATAATTTTGG+AGG | - | chr5.4:43331145-43331164 | None:intergenic | 20.0% |
| !!! | ATTGATGTTATTTTAAGCAT+CGG | + | chr5.4:43329975-43329994 | MS.gene59676:intron | 20.0% |
| !!! | TAATAACTTTAGGTTTTGTT+TGG | + | chr5.4:43330952-43330971 | MS.gene59676:intron | 20.0% |
| !!! | TATTGTAGAATAATTTTGGA+GGG | - | chr5.4:43331144-43331163 | None:intergenic | 20.0% |
| !!! | TTTAGAGTATTATAACAACA+TGG | + | chr5.4:43331093-43331112 | MS.gene59676:intron | 20.0% |
| !!! | TTTTAAATGAAACTTCTTAC+AGG | - | chr5.4:43330904-43330923 | None:intergenic | 20.0% |
| ! | AAAGAGAATAAATCAAATGC+AGG | + | chr5.4:43332811-43332830 | MS.gene59676:intron | 25.0% |
| ! | AAATCAAACAGGTTAAATCA+AGG | - | chr5.4:43330495-43330514 | None:intergenic | 25.0% |
| ! | AAGAGAATAAATCAAATGCA+GGG | + | chr5.4:43332812-43332831 | MS.gene59676:intron | 25.0% |
| ! | AATACAAAATTCCCCTAATT+TGG | - | chr5.4:43331183-43331202 | None:intergenic | 25.0% |
| ! | AATATTACAAGAGAACTACT+AGG | + | chr5.4:43332869-43332888 | MS.gene59676:intron | 25.0% |
| ! | AATTTCATGTTCACACAAAA+GGG | - | chr5.4:43330340-43330359 | None:intergenic | 25.0% |
| ! | AGAAAACAACATCAAATCAA+AGG | - | chr5.4:43329947-43329966 | None:intergenic | 25.0% |
| ! | AGTTCTCTTGTAATATTTCT+AGG | - | chr5.4:43332866-43332885 | None:intergenic | 25.0% |
| ! | ATACAAAATTCCCCTAATTT+GGG | - | chr5.4:43331182-43331201 | None:intergenic | 25.0% |
| ! | ATCCATATATATCTGTTATG+CGG | + | chr5.4:43333077-43333096 | MS.gene59676:CDS | 25.0% |
| ! | ATTACGTTGTTAATACAAAC+AGG | - | chr5.4:43330040-43330059 | None:intergenic | 25.0% |
| ! | ATTTAATAAAATTCGCGACA+TGG | + | chr5.4:43331343-43331362 | MS.gene59676:intron | 25.0% |
| ! | CATGAGAAATGAATACATAA+AGG | - | chr5.4:43332121-43332140 | None:intergenic | 25.0% |
| ! | GAAATTGAAAGGATTGTATT+AGG | - | chr5.4:43330616-43330635 | None:intergenic | 25.0% |
| ! | GTTATAGTTAATCTAATGAG+AGG | + | chr5.4:43330425-43330444 | MS.gene59676:intron | 25.0% |
| ! | TATCCAACTCATTAATCTTT+AGG | - | chr5.4:43332900-43332919 | None:intergenic | 25.0% |
| ! | TCAGATCCTAAAAAAATTGT+GGG | - | chr5.4:43329392-43329411 | None:intergenic | 25.0% |
| !! | ACATGGATACTTTCATTTTA+TGG | + | chr5.4:43331360-43331379 | MS.gene59676:intron | 25.0% |
| !! | ATAACTTGTGAAAGATCATA+AGG | + | chr5.4:43330153-43330172 | MS.gene59676:intron | 25.0% |
| !! | ATGTCGCGAATTTTATTAAA+TGG | - | chr5.4:43331344-43331363 | None:intergenic | 25.0% |
| !! | CATTTTATGTTGTTAGCTAA+TGG | + | chr5.4:43330831-43330850 | MS.gene59676:intron | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | + | chr5.4:43331994-43332013 | MS.gene59676:CDS | 25.0% |
| !!! | AACAAACCCACAATTTTTTT+AGG | + | chr5.4:43329383-43329402 | MS.gene59676:intron | 25.0% |
| !!! | CAAATTTTAAAGAGCAAGAA+AGG | - | chr5.4:43330299-43330318 | None:intergenic | 25.0% |
| AAATCTGGTTGAAAAACTCA+TGG | - | chr5.4:43333131-43333150 | None:intergenic | 30.0% | |
| AAGCAATAACCAATGAGATA+AGG | - | chr5.4:43331811-43331830 | None:intergenic | 30.0% | |
| AATTGCTCTATCAAATAAGG+TGG | - | chr5.4:43331027-43331046 | None:intergenic | 30.0% | |
| ACAAACGTAATGTTCATCTT+CGG | + | chr5.4:43330536-43330555 | MS.gene59676:intron | 30.0% | |
| ACATTGATAAGTACACATAC+CGG | + | chr5.4:43329617-43329636 | MS.gene59676:CDS | 30.0% | |
| ACCTATTGTAGAAAATATGG+TGG | + | chr5.4:43332735-43332754 | MS.gene59676:intron | 30.0% | |
| AGACCTAAAGATTAATGAGT+TGG | + | chr5.4:43332894-43332913 | MS.gene59676:intron | 30.0% | |
| AGCACCTATTGTAGAAAATA+TGG | + | chr5.4:43332732-43332751 | MS.gene59676:intron | 30.0% | |
| AGGTCTATGGTAATAACTTT+AGG | + | chr5.4:43330942-43330961 | MS.gene59676:intron | 30.0% | |
| ATATCATATCTGTCGTAGAT+AGG | + | chr5.4:43329884-43329903 | MS.gene59676:CDS | 30.0% | |
| ATTGAAAGGATTGTATTAGG+AGG | - | chr5.4:43330613-43330632 | None:intergenic | 30.0% | |
| CAAGATAAGTGGTAAGAATA+TGG | - | chr5.4:43329780-43329799 | None:intergenic | 30.0% | |
| CAATTTCATGTTCACACAAA+AGG | - | chr5.4:43330341-43330360 | None:intergenic | 30.0% | |
| CATAAAATGTAGTCTCAGAA+AGG | - | chr5.4:43329921-43329940 | None:intergenic | 30.0% | |
| CTAACAACATAAAATGACCT+AGG | - | chr5.4:43330827-43330846 | None:intergenic | 30.0% | |
| CTCAGATCCTAAAAAAATTG+TGG | - | chr5.4:43329393-43329412 | None:intergenic | 30.0% | |
| GAAAATGAGAGTCATAATAC+AGG | - | chr5.4:43330782-43330801 | None:intergenic | 30.0% | |
| GGATCTGAGTATATATCATA+TGG | + | chr5.4:43329404-43329423 | MS.gene59676:intron | 30.0% | |
| GTATTAGGAGGACAAATAAT+AGG | - | chr5.4:43330601-43330620 | None:intergenic | 30.0% | |
| TACAAAATTCCCCTAATTTG+GGG | - | chr5.4:43331181-43331200 | None:intergenic | 30.0% | |
| TAGGTGAGCTCTTAAAATAT+TGG | - | chr5.4:43330573-43330592 | None:intergenic | 30.0% | |
| TCAGTGATTCAATTACTTTG+AGG | + | chr5.4:43330800-43330819 | MS.gene59676:intron | 30.0% | |
| TTAACTTAGTACCTGATTGT+TGG | - | chr5.4:43329346-43329365 | None:intergenic | 30.0% | |
| TTAGCTTATCCTTATCTCAT+TGG | + | chr5.4:43331799-43331818 | MS.gene59676:intron | 30.0% | |
| TTCCGCATAACAGATATATA+TGG | - | chr5.4:43333082-43333101 | None:intergenic | 30.0% | |
| ! | ACTTTCATTTTATGGCAGAT+CGG | + | chr5.4:43331368-43331387 | MS.gene59676:intron | 30.0% |
| ! | AGTGATAGAGCTTTTATGAT+TGG | + | chr5.4:43332612-43332631 | MS.gene59676:CDS | 30.0% |
| ! | ATGGATTTTTGACAATATGC+AGG | + | chr5.4:43329423-43329442 | MS.gene59676:intron | 30.0% |
| ! | CCTTATTTGATAGAGCAATT+CGG | + | chr5.4:43331027-43331046 | MS.gene59676:intron | 30.0% |
| ! | TAACAACAGAGAGAGATTTT+GGG | + | chr5.4:43332707-43332726 | MS.gene59676:intron | 30.0% |
| ! | TCCACCATATTTTCTACAAT+AGG | - | chr5.4:43332739-43332758 | None:intergenic | 30.0% |
| ! | TGGATTTTTGACAATATGCA+GGG | + | chr5.4:43329424-43329443 | MS.gene59676:intron | 30.0% |
| ! | TTTGATTCGTTTCAGATAAG+AGG | + | chr5.4:43332154-43332173 | MS.gene59676:intron | 30.0% |
| !! | AGATTCTCTCTGAAATTGAA+AGG | - | chr5.4:43330627-43330646 | None:intergenic | 30.0% |
| !! | TTGGTCATTAAGTTGATTTC+TGG | + | chr5.4:43331490-43331509 | MS.gene59676:intron | 30.0% |
| !!! | TACATACTTTTGAGACTGTT+TGG | - | chr5.4:43330223-43330242 | None:intergenic | 30.0% |
| !!! | TGACATGTGAATTTTTAGGT+TGG | + | chr5.4:43333021-43333040 | MS.gene59676:intron | 30.0% |
| AAAAGGCTGTTAAGATGGTA+TGG | + | chr5.4:43331566-43331585 | MS.gene59676:CDS | 35.0% | |
| AATATCACAGATCGTCAATC+AGG | + | chr5.4:43330922-43330941 | MS.gene59676:intron | 35.0% | |
| AATGAAATTGTTAGAGGCAG+AGG | + | chr5.4:43332836-43332855 | MS.gene59676:intron | 35.0% | |
| AATTCATGTATTGGGAACTC+AGG | - | chr5.4:43330660-43330679 | None:intergenic | 35.0% | |
| ACAAAATTCCCCTAATTTGG+GGG | - | chr5.4:43331180-43331199 | None:intergenic | 35.0% | |
| ACAATATGCAGGGAATGTAT+AGG | + | chr5.4:43329434-43329453 | MS.gene59676:intron | 35.0% | |
| ACAGGTTCAAGAAAAAGAAC+AGG | + | chr5.4:43329590-43329609 | MS.gene59676:CDS | 35.0% | |
| ACAGGTTCTCATAACTCTTA+AGG | - | chr5.4:43330022-43330041 | None:intergenic | 35.0% | |
| AGGAGGACAAATAATAGGAT+AGG | - | chr5.4:43330596-43330615 | None:intergenic | 35.0% | |
| ATGTTACCCACTACTAAGTA+GGG | - | chr5.4:43332965-43332984 | None:intergenic | 35.0% | |
| ATTCATGTATTGGGAACTCA+GGG | - | chr5.4:43330659-43330678 | None:intergenic | 35.0% | |
| CAAAATCTCTCTCTGTTGTT+AGG | - | chr5.4:43332708-43332727 | None:intergenic | 35.0% | |
| CAAACGTAATGTTCATCTTC+GGG | + | chr5.4:43330537-43330556 | MS.gene59676:intron | 35.0% | |
| CAACATTGTAAATGGAAGTC+TGG | - | chr5.4:43331539-43331558 | None:intergenic | 35.0% | |
| CAAGAAAGGTAATCAATCTC+TGG | - | chr5.4:43330285-43330304 | None:intergenic | 35.0% | |
| CAGACTTCCATTTACAATGT+TGG | + | chr5.4:43331537-43331556 | MS.gene59676:intron | 35.0% | |
| CAGGGTAATGAAATTGTTAG+AGG | + | chr5.4:43332830-43332849 | MS.gene59676:intron | 35.0% | |
| CATTATTCACAGCTGCTATT+AGG | + | chr5.4:43332034-43332053 | MS.gene59676:CDS | 35.0% | |
| CCATAAACACCAATCTTCAA+AGG | - | chr5.4:43332426-43332445 | None:intergenic | 35.0% | |
| CCCATCTCTGAATCAATAAT+GGG | - | chr5.4:43333107-43333126 | None:intergenic | 35.0% | |
| CCGAATTGCTCTATCAAATA+AGG | - | chr5.4:43331030-43331049 | None:intergenic | 35.0% | |
| CTATTTGTGATCCAGTTGAT+TGG | + | chr5.4:43329535-43329554 | MS.gene59676:CDS | 35.0% | |
| GATTTCATTATGGAGTTAGC+CGG | - | chr5.4:43331967-43331986 | None:intergenic | 35.0% | |
| GGACAAATAATAGGATAGGT+AGG | - | chr5.4:43330592-43330611 | None:intergenic | 35.0% | |
| TAGCAAATAGAAGGGAATGA+AGG | - | chr5.4:43331458-43331477 | None:intergenic | 35.0% | |
| TATGTTACCCACTACTAAGT+AGG | - | chr5.4:43332966-43332985 | None:intergenic | 35.0% | |
| TCCAAAATAAGCTTACAGAG+AGG | - | chr5.4:43331852-43331871 | None:intergenic | 35.0% | |
| TCCCATCTCTGAATCAATAA+TGG | - | chr5.4:43333108-43333127 | None:intergenic | 35.0% | |
| TGATTGTTGAGATGCACAAT+GGG | - | chr5.4:43332293-43332312 | None:intergenic | 35.0% | |
| TGCAGAACCAACATTGTAAA+TGG | - | chr5.4:43331547-43331566 | None:intergenic | 35.0% | |
| TTCATTCTGTCTGTTCTTGT+TGG | + | chr5.4:43331745-43331764 | MS.gene59676:intron | 35.0% | |
| TTGATTGTTGAGATGCACAA+TGG | - | chr5.4:43332294-43332313 | None:intergenic | 35.0% | |
| ! | AACAACAGAGAGAGATTTTG+GGG | + | chr5.4:43332708-43332727 | MS.gene59676:intron | 35.0% |
| ! | CCTTTGAAGATTGGTGTTTA+TGG | + | chr5.4:43332423-43332442 | MS.gene59676:intron | 35.0% |
| ! | CTAACAACAGAGAGAGATTT+TGG | + | chr5.4:43332706-43332725 | MS.gene59676:intron | 35.0% |
| ! | CTGTTAATGGGAACCATTTT+AGG | + | chr5.4:43332540-43332559 | MS.gene59676:CDS | 35.0% |
| ! | GATCAGTGTTTTGTGTTTCT+GGG | + | chr5.4:43329804-43329823 | MS.gene59676:CDS | 35.0% |
| ! | GCTATTAGTTTACACTGTCT+TGG | + | chr5.4:43332355-43332374 | MS.gene59676:intron | 35.0% |
| ! | GGCATGACATGTGAATTTTT+AGG | + | chr5.4:43333017-43333036 | MS.gene59676:intron | 35.0% |
| ! | TCCTCTCTGTAAGCTTATTT+TGG | + | chr5.4:43331848-43331867 | MS.gene59676:CDS | 35.0% |
| ! | TGATCAGTGTTTTGTGTTTC+TGG | + | chr5.4:43329803-43329822 | MS.gene59676:CDS | 35.0% |
| ! | TGATTTCCTTTTCCATCTTG+TGG | + | chr5.4:43332222-43332241 | MS.gene59676:CDS | 35.0% |
| ! | TTAATGGGAACCATTTTAGG+TGG | + | chr5.4:43332543-43332562 | MS.gene59676:CDS | 35.0% |
| ! | TTCAATTACTTTGAGGACCT+AGG | + | chr5.4:43330807-43330826 | MS.gene59676:intron | 35.0% |
| ! | TTGGATTCGTTGGTTACATA+CGG | + | chr5.4:43331764-43331783 | MS.gene59676:intron | 35.0% |
| ! | TTTCTGGTATACGAGAATCA+AGG | - | chr5.4:43333221-43333240 | None:intergenic | 35.0% |
| !! | ACCCATTATTGATTCAGAGA+TGG | + | chr5.4:43333103-43333122 | MS.gene59676:CDS | 35.0% |
| !! | CCCATTATTGATTCAGAGAT+GGG | + | chr5.4:43333104-43333123 | MS.gene59676:CDS | 35.0% |
| !! | GTCATTAAGTTGATTTCTGG+TGG | + | chr5.4:43331493-43331512 | MS.gene59676:intron | 35.0% |
| !! | TAATGGGAACCATTTTAGGT+GGG | + | chr5.4:43332544-43332563 | MS.gene59676:CDS | 35.0% |
| !! | TACAATGTTGGTTCTGCAAA+AGG | + | chr5.4:43331549-43331568 | MS.gene59676:CDS | 35.0% |
| !! | TAGAATAATTTTGGAGGGCT+TGG | - | chr5.4:43331139-43331158 | None:intergenic | 35.0% |
| !! | TCTTTTGGCAGCATTTGTTA+TGG | + | chr5.4:43332009-43332028 | MS.gene59676:CDS | 35.0% |
| !! | TGAGAGGTAGAGTTTTTAAG+AGG | + | chr5.4:43330441-43330460 | MS.gene59676:intron | 35.0% |
| !! | TTGCTTTTATGCATGTATGC+AGG | + | chr5.4:43331825-43331844 | MS.gene59676:intron | 35.0% |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | + | chr5.4:43331853-43331872 | MS.gene59676:CDS | 35.0% |
| !!! | TGTGAATTTTTAGGTTGGAG+CGG | + | chr5.4:43333026-43333045 | MS.gene59676:intron | 35.0% |
| !!! | TTAGGTTTTGTTTGGGAGTT+TGG | + | chr5.4:43330960-43330979 | MS.gene59676:intron | 35.0% |
| ACACCAATCTTCAAAGGACA+TGG | - | chr5.4:43332420-43332439 | None:intergenic | 40.0% | |
| ACAGTACATGTCATAGTGTC+TGG | + | chr5.4:43331892-43331911 | MS.gene59676:CDS | 40.0% | |
| ACTGATCACAGCAAGATAAG+TGG | - | chr5.4:43329791-43329810 | None:intergenic | 40.0% | |
| ACTTAGTACCTGATTGTTGG+TGG | - | chr5.4:43329343-43329362 | None:intergenic | 40.0% | |
| AGTTATCAGCCCACCTAAAA+TGG | - | chr5.4:43332556-43332575 | None:intergenic | 40.0% | |
| CAAAATTCCCCTAATTTGGG+GGG | - | chr5.4:43331179-43331198 | None:intergenic | 40.0% | |
| CAACAACAACATCAGTGAAG+TGG | + | chr5.4:43329465-43329484 | MS.gene59676:CDS | 40.0% | |
| CACCAATCTTCAAAGGACAT+GGG | - | chr5.4:43332419-43332438 | None:intergenic | 40.0% | |
| CAGGGAATGTATAGGAAAAG+TGG | + | chr5.4:43329442-43329461 | MS.gene59676:intron | 40.0% | |
| CAGTACATGTCATAGTGTCT+GGG | + | chr5.4:43331893-43331912 | MS.gene59676:CDS | 40.0% | |
| CATTCTTGCCTATCTTTGAC+CGG | - | chr5.4:43332183-43332202 | None:intergenic | 40.0% | |
| CGTTTCAGATAAGAGGAATC+CGG | + | chr5.4:43332161-43332180 | MS.gene59676:intron | 40.0% | |
| CTGAATATGCATCCGAACAT+AGG | + | chr5.4:43332996-43333015 | MS.gene59676:intron | 40.0% | |
| CTGGGAGTTATTCCAATCAA+CGG | + | chr5.4:43332476-43332495 | MS.gene59676:CDS | 40.0% | |
| GGATCTACATCTATGCTCAT+GGG | + | chr5.4:43332633-43332652 | MS.gene59676:CDS | 40.0% | |
| TAACAAGTATGCGTATGTCC+AGG | + | chr5.4:43332264-43332283 | MS.gene59676:CDS | 40.0% | |
| TATGCTCATGGGCATGATAT+TGG | + | chr5.4:43332644-43332663 | MS.gene59676:CDS | 40.0% | |
| TCACATGTCATGCCTATGTT+CGG | - | chr5.4:43333011-43333030 | None:intergenic | 40.0% | |
| TCTGCAAAAGGCTGTTAAGA+TGG | + | chr5.4:43331561-43331580 | MS.gene59676:CDS | 40.0% | |
| TCTGTTCTTGTTGGATTCGT+TGG | + | chr5.4:43331754-43331773 | MS.gene59676:intron | 40.0% | |
| TGGATCTACATCTATGCTCA+TGG | + | chr5.4:43332632-43332651 | MS.gene59676:CDS | 40.0% | |
| TGGGAGTTATTCCAATCAAC+GGG | + | chr5.4:43332477-43332496 | MS.gene59676:CDS | 40.0% | |
| TGGTGAACATGGAGCAAAAA+AGG | + | chr5.4:43329485-43329504 | MS.gene59676:CDS | 40.0% | |
| TGTTAACGCCAAGAATCACA+AGG | - | chr5.4:43329573-43329592 | None:intergenic | 40.0% | |
| TGTTACCCACTACTAAGTAG+GGG | - | chr5.4:43332964-43332983 | None:intergenic | 40.0% | |
| TTATGGCTGTCATGCTCTTA+TGG | + | chr5.4:43331623-43331642 | MS.gene59676:CDS | 40.0% | |
| TTGTGATTCTTGGCGTTAAC+AGG | + | chr5.4:43329572-43329591 | MS.gene59676:CDS | 40.0% | |
| ! | AATATGGTGGAAACTCGACT+TGG | + | chr5.4:43332748-43332767 | MS.gene59676:intron | 40.0% |
| ! | ATATGGTGGAAACTCGACTT+GGG | + | chr5.4:43332749-43332768 | MS.gene59676:intron | 40.0% |
| !! | AAGTTGATTTCTGGTGGCTT+TGG | + | chr5.4:43331499-43331518 | MS.gene59676:intron | 40.0% |
| !! | GGTTTTGTCCTTGTGATTCT+TGG | + | chr5.4:43329562-43329581 | MS.gene59676:CDS | 40.0% |
| !! | TAAGTACACATACCGGTTCA+TGG | + | chr5.4:43329624-43329643 | MS.gene59676:CDS | 40.0% |
| !! | TTTTGTTTGGGAGTTTGGAG+GGG | + | chr5.4:43330965-43330984 | MS.gene59676:intron | 40.0% |
| !!! | ATTTTAGGTGGGCTGATAAC+TGG | + | chr5.4:43332555-43332574 | MS.gene59676:CDS | 40.0% |
| !!! | CTTTTGAGACTGTTTGGAAG+AGG | - | chr5.4:43330217-43330236 | None:intergenic | 40.0% |
| !!! | GTTTTGTTTGGGAGTTTGGA+GGG | + | chr5.4:43330964-43330983 | MS.gene59676:intron | 40.0% |
| AAAGAGAAGGAGGAAGTGGA+AGG | - | chr5.4:43331240-43331259 | None:intergenic | 45.0% | |
| AAGCAACACCCCAGAAAAAC+TGG | - | chr5.4:43329834-43329853 | None:intergenic | 45.0% | |
| AAGTCGCTGGTGCAATGTTT+CGG | - | chr5.4:43333154-43333173 | None:intergenic | 45.0% | |
| ACGAGAATCAAGGTGATCGT+GGG | - | chr5.4:43333211-43333230 | None:intergenic | 45.0% | |
| AGAGACAGTTAGGGTCTGTT+TGG | - | chr5.4:43331289-43331308 | None:intergenic | 45.0% | |
| AGAGGAATCCGGTCAAAGAT+AGG | + | chr5.4:43332172-43332191 | MS.gene59676:CDS | 45.0% | |
| ATCTTGTGGAGACTCTTGTC+AGG | + | chr5.4:43332236-43332255 | MS.gene59676:CDS | 45.0% | |
| CAGATCGTCAATCAGGTCTA+TGG | + | chr5.4:43330929-43330948 | MS.gene59676:intron | 45.0% | |
| CATCAGTGAAGTGGTGAACA+TGG | + | chr5.4:43329474-43329493 | MS.gene59676:CDS | 45.0% | |
| CCATGGAACAGAGACAGTTA+GGG | - | chr5.4:43331298-43331317 | None:intergenic | 45.0% | |
| CTTGTGGCGTATGATTGTTC+AGG | + | chr5.4:43332510-43332529 | MS.gene59676:CDS | 45.0% | |
| GAGACAGTTAGGGTCTGTTT+GGG | - | chr5.4:43331288-43331307 | None:intergenic | 45.0% | |
| GAGAGTCGCATATGCGTTTA+TGG | + | chr5.4:43331606-43331625 | MS.gene59676:CDS | 45.0% | |
| GAGTCTCCACAAGATGGAAA+AGG | - | chr5.4:43332231-43332250 | None:intergenic | 45.0% | |
| GATGGTATGGAATCTTCCAG+AGG | + | chr5.4:43331579-43331598 | MS.gene59676:CDS | 45.0% | |
| GGTGCAATGTTTCGGAAATC+TGG | - | chr5.4:43333146-43333165 | None:intergenic | 45.0% | |
| GTGTTTGGGCATGGATGAAA+TGG | + | chr5.4:43332589-43332608 | MS.gene59676:CDS | 45.0% | |
| GTTACCCACTACTAAGTAGG+GGG | - | chr5.4:43332963-43332982 | None:intergenic | 45.0% | |
| GTTCGGATGCATATTCAGCA+AGG | - | chr5.4:43332994-43333013 | None:intergenic | 45.0% | |
| GTTCGTGTTAGTATCCATGG+TGG | + | chr5.4:43331922-43331941 | MS.gene59676:CDS | 45.0% | |
| TACGAGAATCAAGGTGATCG+TGG | - | chr5.4:43333212-43333231 | None:intergenic | 45.0% | |
| TATGCGACTCTCATAACCTC+TGG | - | chr5.4:43331598-43331617 | None:intergenic | 45.0% | |
| TCCATGGAACAGAGACAGTT+AGG | - | chr5.4:43331299-43331318 | None:intergenic | 45.0% | |
| TGACAAGAGTCTCCACAAGA+TGG | - | chr5.4:43332237-43332256 | None:intergenic | 45.0% | |
| TGAGACTGTTTGGAAGAGGT+TGG | - | chr5.4:43330213-43330232 | None:intergenic | 45.0% | |
| TGCTATTAGGACACTGCGAT+GGG | + | chr5.4:43332047-43332066 | MS.gene59676:CDS | 45.0% | |
| TGCTCTTATGGATGGCATTG+TGG | + | chr5.4:43331635-43331654 | MS.gene59676:CDS | 45.0% | |
| TGGATGGCATTGTGGTCATT+CGG | + | chr5.4:43331643-43331662 | MS.gene59676:CDS | 45.0% | |
| TTTGTTTGGGAGTTTGGAGG+GGG | + | chr5.4:43330966-43330985 | MS.gene59676:intron | 45.0% | |
| ! | ACATGGAGCAAAAAAGGCGT+TGG | + | chr5.4:43329491-43329510 | MS.gene59676:CDS | 45.0% |
| ! | ATGGAGTTGGTTGTTGCTGT+TGG | + | chr5.4:43329720-43329739 | MS.gene59676:CDS | 45.0% |
| ! | ATTTGGAGTCCCCCCAAATT+AGG | + | chr5.4:43331167-43331186 | MS.gene59676:intron | 45.0% |
| ! | CGTTGATTGGAATAACTCCC+AGG | - | chr5.4:43332478-43332497 | None:intergenic | 45.0% |
| ! | CTCCCATGTCCTTTGAAGAT+TGG | + | chr5.4:43332414-43332433 | MS.gene59676:intron | 45.0% |
| ! | CTGATAACTGGAACTTGCTC+TGG | + | chr5.4:43332567-43332586 | MS.gene59676:CDS | 45.0% |
| ! | CTGGTTCGTGTTAGTATCCA+TGG | + | chr5.4:43331919-43331938 | MS.gene59676:CDS | 45.0% |
| ! | CTGGTTTGACAGAGGATTAC+TGG | + | chr5.4:43329656-43329675 | MS.gene59676:CDS | 45.0% |
| ! | GGTGTTGTAGCTTCAAGCAT+GGG | + | chr5.4:43331673-43331692 | MS.gene59676:CDS | 45.0% |
| ! | TAGGGGGCATGAATCAAACA+GGG | - | chr5.4:43332947-43332966 | None:intergenic | 45.0% |
| ! | TCAGGTGCTGTGCTGTTAAT+GGG | + | chr5.4:43332528-43332547 | MS.gene59676:CDS | 45.0% |
| ! | TGGAACTTGCTCTGGTGTTT+GGG | + | chr5.4:43332575-43332594 | MS.gene59676:CDS | 45.0% |
| ! | TGGAGTTGGTTGTTGCTGTT+GGG | + | chr5.4:43329721-43329740 | MS.gene59676:CDS | 45.0% |
| ! | TTCAGGTGCTGTGCTGTTAA+TGG | + | chr5.4:43332527-43332546 | MS.gene59676:CDS | 45.0% |
| ! | TTTGGAGTCCCCCCAAATTA+GGG | + | chr5.4:43331168-43331187 | MS.gene59676:intron | 45.0% |
| !! | ATACCGGTTCATGGAGAATG+AGG | + | chr5.4:43329633-43329652 | MS.gene59676:CDS | 45.0% |
| !! | GATGGCTTTGGGAAAAGAGA+AGG | - | chr5.4:43331253-43331272 | None:intergenic | 45.0% |
| !! | GCTGTTTCTATGCATCTCCA+TGG | - | chr5.4:43331315-43331334 | None:intergenic | 45.0% |
| !! | TGGTGTTGTAGCTTCAAGCA+TGG | + | chr5.4:43331672-43331691 | MS.gene59676:CDS | 45.0% |
| !!! | GGTTTTGTTTGGGAGTTTGG+AGG | + | chr5.4:43330963-43330982 | MS.gene59676:intron | 45.0% |
| !!! | TGGGGTGTTGCTTTTGCTAT+TGG | + | chr5.4:43329841-43329860 | MS.gene59676:CDS | 45.0% |
| !!! | TTTTTAGGTTGGAGCGGCAA+TGG | + | chr5.4:43333032-43333051 | MS.gene59676:intron | 45.0% |
| AGCTCCTATGTTGAAGTCGC+TGG | - | chr5.4:43333167-43333186 | None:intergenic | 50.0% | |
| CAAAACCCACGCCAATCAAC+TGG | - | chr5.4:43329549-43329568 | None:intergenic | 50.0% | |
| CAGCCTCATTCTCCATGAAC+CGG | - | chr5.4:43329639-43329658 | None:intergenic | 50.0% | |
| CATGCCCCCTACTTAGTAGT+GGG | + | chr5.4:43332956-43332975 | MS.gene59676:intron | 50.0% | |
| CCCTAACTGTCTCTGTTCCA+TGG | + | chr5.4:43331295-43331314 | MS.gene59676:intron | 50.0% | |
| CTGCTATTAGGACACTGCGA+TGG | + | chr5.4:43332046-43332065 | MS.gene59676:CDS | 50.0% | |
| GAAGGAGGAAGTGGAAGGAA+AGG | - | chr5.4:43331235-43331254 | None:intergenic | 50.0% | |
| GAGGAAGTGGAAGGAAAGGA+GGG | - | chr5.4:43331231-43331250 | None:intergenic | 50.0% | |
| GGACAGACACCTTCATCATC+TGG | - | chr5.4:43329759-43329778 | None:intergenic | 50.0% | |
| GGCTGTCATGCTCTTATGGA+TGG | + | chr5.4:43331627-43331646 | MS.gene59676:CDS | 50.0% | |
| GGGAAAAGAGAAGGAGGAAG+TGG | - | chr5.4:43331244-43331263 | None:intergenic | 50.0% | |
| GTAGCTTCAAGCATGGGTGA+CGG | + | chr5.4:43331679-43331698 | MS.gene59676:CDS | 50.0% | |
| GTCTGTTTGGGAGTTCAGGA+GGG | - | chr5.4:43331276-43331295 | None:intergenic | 50.0% | |
| GTGATCCAGTTGATTGGCGT+GGG | + | chr5.4:43329541-43329560 | MS.gene59676:CDS | 50.0% | |
| GTGCTTCAACTCCCGTTGAT+TGG | - | chr5.4:43332491-43332510 | None:intergenic | 50.0% | |
| TAGGGTCTGTTTGGGAGTTC+AGG | - | chr5.4:43331280-43331299 | None:intergenic | 50.0% | |
| TAGTATCCATGGTGGTTGCG+AGG | + | chr5.4:43331930-43331949 | MS.gene59676:CDS | 50.0% | |
| TATTAGGACACTGCGATGGG+AGG | + | chr5.4:43332050-43332069 | MS.gene59676:CDS | 50.0% | |
| TCATGCCCCCTACTTAGTAG+TGG | + | chr5.4:43332955-43332974 | MS.gene59676:intron | 50.0% | |
| TCTGTTTGGGAGTTCAGGAG+GGG | - | chr5.4:43331275-43331294 | None:intergenic | 50.0% | |
| TGCACCAGCGACTTCAACAT+AGG | + | chr5.4:43333160-43333179 | MS.gene59676:CDS | 50.0% | |
| TGGAAGGAAAGGAGGGCTTT+GGG | - | chr5.4:43331224-43331243 | None:intergenic | 50.0% | |
| TGTCATAGTGTCTGGGTCAC+TGG | + | chr5.4:43331900-43331919 | MS.gene59676:CDS | 50.0% | |
| TGTGATCCAGTTGATTGGCG+TGG | + | chr5.4:43329540-43329559 | MS.gene59676:CDS | 50.0% | |
| TTCCACTGCCACCAACAATC+AGG | + | chr5.4:43329332-43329351 | MS.gene59676:CDS | 50.0% | |
| TTGGAGTCCCCCCAAATTAG+GGG | + | chr5.4:43331169-43331188 | MS.gene59676:intron | 50.0% | |
| ! | AACGGGAGTTGAAGCACTTG+TGG | + | chr5.4:43332494-43332513 | MS.gene59676:CDS | 50.0% |
| ! | CTGGAACTTGCTCTGGTGTT+TGG | + | chr5.4:43332574-43332593 | MS.gene59676:CDS | 50.0% |
| ! | CTGGGCTCACCAGTTTTTCT+GGG | + | chr5.4:43329822-43329841 | MS.gene59676:CDS | 50.0% |
| ! | GTAGGGGGCATGAATCAAAC+AGG | - | chr5.4:43332948-43332967 | None:intergenic | 50.0% |
| ! | TCTGGGCTCACCAGTTTTTC+TGG | + | chr5.4:43329821-43329840 | MS.gene59676:CDS | 50.0% |
| ! | TGGGCTCACCAGTTTTTCTG+GGG | + | chr5.4:43329823-43329842 | MS.gene59676:CDS | 50.0% |
| !! | GAATGAGGCTGGTTTGACAG+AGG | + | chr5.4:43329648-43329667 | MS.gene59676:CDS | 50.0% |
| !! | GGCTTTGGGAAAAGAGAAGG+AGG | - | chr5.4:43331250-43331269 | None:intergenic | 50.0% |
| !! | TACCTGATTGTTGGTGGCAG+TGG | - | chr5.4:43329337-43329356 | None:intergenic | 50.0% |
| AACATAGGAGCTCGCGTGCA+AGG | + | chr5.4:43333175-43333194 | MS.gene59676:CDS | 55.0% | |
| ACATAGGAGCTCGCGTGCAA+GGG | + | chr5.4:43333176-43333195 | MS.gene59676:CDS | 55.0% | |
| ACCGTTCTGCAAGAGATGCC+TGG | + | chr5.4:43332457-43332476 | MS.gene59676:CDS | 55.0% | |
| AGTTCAGGAGGGGATGGCTT+TGG | - | chr5.4:43331265-43331284 | None:intergenic | 55.0% | |
| CCCAGGCATCTCTTGCAGAA+CGG | - | chr5.4:43332461-43332480 | None:intergenic | 55.0% | |
| CCGTTCTGCAAGAGATGCCT+GGG | + | chr5.4:43332458-43332477 | MS.gene59676:CDS | 55.0% | |
| CGGTTCATGGAGAATGAGGC+TGG | + | chr5.4:43329637-43329656 | MS.gene59676:CDS | 55.0% | |
| CTTGCTCTGGTGTTTGGGCA+TGG | + | chr5.4:43332580-43332599 | MS.gene59676:CDS | 55.0% | |
| GCGCGCAATCCAGATGATGA+AGG | + | chr5.4:43329747-43329766 | MS.gene59676:CDS | 55.0% | |
| GGAAGGAAAGGAGGGCTTTG+GGG | - | chr5.4:43331223-43331242 | None:intergenic | 55.0% | |
| GGACTGCTCTTGGATGGAGT+TGG | + | chr5.4:43329707-43329726 | MS.gene59676:CDS | 55.0% | |
| GGAGGAAGTGGAAGGAAAGG+AGG | - | chr5.4:43331232-43331251 | None:intergenic | 55.0% | |
| GGTCTGTTTGGGAGTTCAGG+AGG | - | chr5.4:43331277-43331296 | None:intergenic | 55.0% | |
| GTGGAAGGAAAGGAGGGCTT+TGG | - | chr5.4:43331225-43331244 | None:intergenic | 55.0% | |
| GTTCAGGAGGGGATGGCTTT+GGG | - | chr5.4:43331264-43331283 | None:intergenic | 55.0% | |
| TTGCGAGGCTGCATCAGTTC+CGG | + | chr5.4:43331945-43331964 | MS.gene59676:CDS | 55.0% | |
| TTGTGGTCATTCGGAGCTGC+TGG | + | chr5.4:43331652-43331671 | MS.gene59676:CDS | 55.0% | |
| TTTGGGAGTTCAGGAGGGGA+TGG | - | chr5.4:43331271-43331290 | None:intergenic | 55.0% | |
| ! | AGGGGGTGGACTTTGTTGAG+AGG | + | chr5.4:43330983-43331002 | MS.gene59676:intron | 55.0% |
| ! | GGGGGTGGACTTTGTTGAGA+GGG | + | chr5.4:43330984-43331003 | MS.gene59676:intron | 55.0% |
| !! | GAGATGCACAATGGGCTACC+TGG | - | chr5.4:43332285-43332304 | None:intergenic | 55.0% |
| !! | GGCGTTGGCACGATGTATTC+TGG | + | chr5.4:43329506-43329525 | MS.gene59676:CDS | 55.0% |
| !! | TGGTGGAAACTCGACTTGGG+TGG | + | chr5.4:43332752-43332771 | MS.gene59676:intron | 55.0% |
| ATGCAGCCTCGCAACCACCA+TGG | - | chr5.4:43331939-43331958 | None:intergenic | 60.0% | |
| CCACTCTATGCTGTCGCTGG+CGG | + | chr5.4:43329679-43329698 | MS.gene59676:CDS | 60.0% | |
| GCGTTGGGACTGCTCTTGGA+TGG | + | chr5.4:43329701-43329720 | MS.gene59676:CDS | 60.0% | |
| GGTGGCTTCTTGTGGTGAGC+TGG | + | chr5.4:43331710-43331729 | MS.gene59676:intron | 60.0% | |
| GGTTGGAGCGGCAATGGTTG+TGG | + | chr5.4:43333038-43333057 | MS.gene59676:intron | 60.0% | |
| GTTTGGGAGTTTGGAGGGGG+TGG | + | chr5.4:43330969-43330988 | MS.gene59676:intron | 60.0% | |
| TGGACGCTGGTGGCTTCTTG+TGG | + | chr5.4:43331702-43331721 | MS.gene59676:CDS | 60.0% | |
| TGGAGCGGCAATGGTTGTGG+TGG | + | chr5.4:43333041-43333060 | MS.gene59676:CDS | 60.0% | |
| TGGCCACTCTATGCTGTCGC+TGG | + | chr5.4:43329676-43329695 | MS.gene59676:CDS | 60.0% | |
| ! | GCTTCAAGCATGGGTGACGG+TGG | + | chr5.4:43331682-43331701 | MS.gene59676:CDS | 60.0% |
| ATGCTGTCGCTGGCGGCGTT+GGG | + | chr5.4:43329686-43329705 | MS.gene59676:CDS | 65.0% | |
| CCGCCAGCGACAGCATAGAG+TGG | - | chr5.4:43329682-43329701 | None:intergenic | 65.0% | |
| TATGCTGTCGCTGGCGGCGT+TGG | + | chr5.4:43329685-43329704 | MS.gene59676:CDS | 65.0% | |
| ! | GCATGGGTGACGGTGGACGC+TGG | + | chr5.4:43331689-43331708 | MS.gene59676:CDS | 70.0% |
| ! | GGCGGCGTTGGGACTGCTCT+TGG | + | chr5.4:43329697-43329716 | MS.gene59676:CDS | 70.0% |
| ! | TGGGTGACGGTGGACGCTGG+TGG | + | chr5.4:43331692-43331711 | MS.gene59676:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 43329324 | 43333248 | 43329324 | ID=MS.gene59676 |
| chr5.4 | mRNA | 43329324 | 43333248 | 43329324 | ID=MS.gene59676.t1;Parent=MS.gene59676 |
| chr5.4 | exon | 43329324 | 43329353 | 43329324 | ID=MS.gene59676.t1.exon1;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43329324 | 43329353 | 43329324 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43329445 | 43329905 | 43329445 | ID=MS.gene59676.t1.exon2;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43329445 | 43329905 | 43329445 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43331540 | 43331723 | 43331540 | ID=MS.gene59676.t1.exon3;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43331540 | 43331723 | 43331540 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43331847 | 43332071 | 43331847 | ID=MS.gene59676.t1.exon4;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43331847 | 43332071 | 43331847 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43332169 | 43332285 | 43332169 | ID=MS.gene59676.t1.exon5;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43332169 | 43332285 | 43332169 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43332432 | 43332665 | 43332432 | ID=MS.gene59676.t1.exon6;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43332432 | 43332665 | 43332432 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| chr5.4 | exon | 43333039 | 43333248 | 43333039 | ID=MS.gene59676.t1.exon7;Parent=MS.gene59676.t1 |
| chr5.4 | CDS | 43333039 | 43333248 | 43333039 | ID=cds.MS.gene59676.t1;Parent=MS.gene59676.t1 |
| Gene Sequence |
| Protein sequence |
