Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59980.t1 | XP_013452928.1 | 95.5 | 870 | 35 | 3 | 1 | 867 | 1 | 869 | 0.00E+00 | 1584.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59980.t1 | Q9C8E6 | 53.3 | 890 | 344 | 22 | 1 | 866 | 1 | 842 | 2.3e-215 | 750.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59980.t1 | A0A072UBY1 | 95.5 | 870 | 35 | 3 | 1 | 867 | 1 | 869 | 0.0e+00 | 1584.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene59980 | 0.899001 | 3.05E-77 | -1.69E-46 |
| MS.gene049369 | MS.gene59980 | 0.874162 | 8.38E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene59980 | 0.813563 | 2.40E-51 | -1.69E-46 |
| MS.gene049480 | MS.gene59980 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene049907 | MS.gene59980 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene59980 | 0.859793 | 3.24E-63 | -1.69E-46 |
| MS.gene050971 | MS.gene59980 | 0.837114 | 6.29E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene59980 | 0.853431 | 2.40E-61 | -1.69E-46 |
| MS.gene051521 | MS.gene59980 | 0.806585 | 7.66E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene59980 | 0.866925 | 2.00E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene59980 | 0.842503 | 2.49E-58 | -1.69E-46 |
| MS.gene052414 | MS.gene59980 | 0.812412 | 4.29E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene59980 | 0.808076 | 3.70E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene59980 | 0.80733 | 5.33E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene59980 | 0.92718 | 1.68E-91 | -1.69E-46 |
| MS.gene053449 | MS.gene59980 | 0.846256 | 2.44E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene59980 | 0.810038 | 1.41E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene59980 | 0.8196 | 1.07E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene59980 | 0.815003 | 1.15E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene59980 | 0.841063 | 5.96E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene59980 | 0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene59980 | 0.833414 | 5.41E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene59980 | 0.825502 | 4.53E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene59980 | 0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene055666 | MS.gene59980 | 0.824606 | 7.37E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene59980 | 0.809762 | 1.61E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene59980 | 0.81015 | 1.33E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene59980 | 0.824262 | 8.88E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene59980 | 0.822243 | 2.63E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene59980 | 0.816767 | 4.67E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene59980 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene056719 | MS.gene59980 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene057396 | MS.gene59980 | 0.82847 | 8.83E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene59980 | 0.848495 | 5.91E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene59980 | 0.851043 | 1.15E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene59980 | 0.843814 | 1.11E-58 | -1.69E-46 |
| MS.gene057537 | MS.gene59980 | 0.892797 | 1.14E-74 | -1.69E-46 |
| MS.gene057610 | MS.gene59980 | 0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene59980 | 0.805975 | 1.03E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene59980 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene59980 | 0.834486 | 2.91E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene59980 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene058075 | MS.gene59980 | 0.835166 | 1.97E-56 | -1.69E-46 |
| MS.gene058120 | MS.gene59980 | 0.821353 | 4.23E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene59980 | 0.803544 | 3.31E-49 | -1.69E-46 |
| MS.gene058403 | MS.gene59980 | 0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene59980 | 0.830312 | 3.15E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene59980 | 0.86047 | 2.02E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene59980 | 0.818125 | 2.31E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene59980 | 0.836392 | 9.61E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene59980 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene059294 | MS.gene59980 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene59980 | 0.862679 | 4.27E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene59980 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene05959 | MS.gene59980 | 0.80787 | 4.09E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene59980 | 0.874163 | 8.37E-68 | -1.69E-46 |
| MS.gene059676 | MS.gene59980 | 0.834292 | 3.26E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene59980 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene59980 | 0.808721 | 2.69E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene59980 | 0.806338 | 8.64E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene59980 | 0.854037 | 1.61E-61 | -1.69E-46 |
| MS.gene059788 | MS.gene59980 | 0.803378 | 3.59E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene59980 | 0.903501 | 3.25E-79 | -1.69E-46 |
| MS.gene05986 | MS.gene59980 | 0.824843 | 6.48E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene59980 | 0.814787 | 1.29E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene59980 | 0.860949 | 1.45E-63 | -1.69E-46 |
| MS.gene060496 | MS.gene59980 | 0.819872 | 9.25E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene59980 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene59980 | 0.84383 | 1.10E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene59980 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene59980 | -0.837591 | 4.75E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene59980 | 0.815061 | 1.12E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59980.t1 | MTR_6g080430 | 97.241 | 870 | 20 | 3 | 1 | 867 | 1 | 869 | 0.0 | 1730 |
| MS.gene59980.t1 | MTR_8g106680 | 67.423 | 881 | 253 | 16 | 7 | 867 | 4 | 870 | 0.0 | 1085 |
| MS.gene59980.t1 | MTR_4g125670 | 26.337 | 486 | 210 | 17 | 516 | 864 | 593 | 1067 | 2.84e-32 | 135 |
| MS.gene59980.t1 | MTR_4g125670 | 25.428 | 409 | 253 | 11 | 106 | 473 | 50 | 447 | 5.50e-23 | 105 |
| MS.gene59980.t1 | MTR_1g015120 | 27.338 | 417 | 217 | 12 | 512 | 864 | 644 | 1038 | 1.37e-31 | 133 |
| MS.gene59980.t1 | MTR_1g015120 | 28.453 | 362 | 199 | 13 | 79 | 420 | 44 | 365 | 6.90e-25 | 112 |
| MS.gene59980.t1 | MTR_2g040970 | 35.196 | 179 | 113 | 1 | 101 | 279 | 69 | 244 | 7.31e-30 | 128 |
| MS.gene59980.t1 | MTR_2g040970 | 29.189 | 185 | 117 | 4 | 517 | 692 | 704 | 883 | 3.26e-18 | 90.9 |
| MS.gene59980.t1 | MTR_2g040970 | 35.196 | 179 | 113 | 1 | 101 | 279 | 69 | 244 | 7.83e-30 | 128 |
| MS.gene59980.t1 | MTR_2g040970 | 29.189 | 185 | 117 | 4 | 517 | 692 | 704 | 883 | 4.37e-18 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59980.t1 | AT1G42550 | 51.624 | 893 | 354 | 23 | 1 | 866 | 1 | 842 | 0.0 | 795 |
| MS.gene59980.t1 | AT5G20610 | 26.366 | 421 | 209 | 13 | 1 | 395 | 1 | 346 | 5.30e-29 | 125 |
| MS.gene59980.t1 | AT5G20610 | 33.684 | 190 | 119 | 3 | 512 | 697 | 701 | 887 | 3.28e-22 | 103 |
| MS.gene59980.t1 | AT5G26160 | 34.568 | 162 | 102 | 2 | 118 | 278 | 72 | 230 | 1.48e-25 | 114 |
| MS.gene59980.t1 | AT5G26160 | 23.778 | 450 | 285 | 15 | 444 | 848 | 506 | 942 | 1.62e-18 | 91.7 |
| MS.gene59980.t1 | AT5G26160 | 34.568 | 162 | 102 | 2 | 118 | 278 | 72 | 230 | 1.48e-25 | 114 |
| MS.gene59980.t1 | AT5G26160 | 23.778 | 450 | 285 | 15 | 444 | 848 | 506 | 942 | 1.62e-18 | 91.7 |
| MS.gene59980.t1 | AT5G26160 | 34.568 | 162 | 102 | 2 | 118 | 278 | 72 | 230 | 1.52e-25 | 114 |
| MS.gene59980.t1 | AT5G26160 | 23.884 | 448 | 283 | 15 | 446 | 848 | 508 | 942 | 1.67e-18 | 91.7 |
Find 154 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGATTTCAACAGGTATT+TGG | 0.163938 | 6.1:-71851803 | MS.gene59980:CDS |
| TCATTTCTGTTTGTGATTCT+TGG | 0.170020 | 6.1:+71852779 | None:intergenic |
| AAACAACTCTAATCCATTTA+AGG | 0.173944 | 6.1:+71852046 | None:intergenic |
| GATTCAAATCATCGATTTCT+TGG | 0.189216 | 6.1:+71852717 | None:intergenic |
| GGAAAACATGCATTGGTAAA+AGG | 0.216506 | 6.1:-71851243 | MS.gene59980:CDS |
| ATGCAATGGTTGATTGAATA+TGG | 0.219889 | 6.1:-71851288 | MS.gene59980:CDS |
| ACATCACAAGACTCCTTAAA+TGG | 0.236280 | 6.1:-71852059 | MS.gene59980:CDS |
| TATGGAATTGGAAACCTATT+AGG | 0.249099 | 6.1:-71853387 | MS.gene59980:CDS |
| ATTAGGGCAATTTCTCATAT+TGG | 0.253080 | 6.1:-71853370 | MS.gene59980:CDS |
| GATGCTAAAGAGCTTGATTT+TGG | 0.270366 | 6.1:-71853076 | MS.gene59980:CDS |
| GAAGCTAGGATTTCAAATTA+TGG | 0.280085 | 6.1:-71852924 | MS.gene59980:CDS |
| AATGCAGAAAATTGAGTTCA+TGG | 0.297933 | 6.1:-71851733 | MS.gene59980:CDS |
| AGTTTGAGCCAAGACCATTT+TGG | 0.305461 | 6.1:-71853117 | MS.gene59980:CDS |
| ATATGAGAAATTGCCCTAAT+AGG | 0.309054 | 6.1:+71853373 | None:intergenic |
| ATTAGAGTTGTTTCAGAAAC+TGG | 0.313646 | 6.1:-71852036 | MS.gene59980:CDS |
| GACATTTGCATTGCTAGCTT+TGG | 0.317570 | 6.1:+71852098 | None:intergenic |
| TTTGATGAAAGAACAAATTC+AGG | 0.324946 | 6.1:-71853427 | MS.gene59980:CDS |
| TTCTAGCTGTTGTGTGTGAT+TGG | 0.336318 | 6.1:+71853656 | None:intergenic |
| AAGCTAGGATTTCAAATTAT+GGG | 0.339335 | 6.1:-71852923 | MS.gene59980:CDS |
| CAAGTGTATCTTCCTGATCT+TGG | 0.343319 | 6.1:-71852212 | MS.gene59980:CDS |
| TATGAATGATGAACTGGATT+TGG | 0.346197 | 6.1:+71852683 | None:intergenic |
| TTCACTTGCTAAGCAGATAA+AGG | 0.350530 | 6.1:-71852444 | MS.gene59980:CDS |
| TCCTTGACAATTTCACTTGA+AGG | 0.360120 | 6.1:+71852512 | None:intergenic |
| AAGCGCTGCGCGGATAGTTT+CGG | 0.361948 | 6.1:-71851868 | MS.gene59980:CDS |
| CTGTTTGTGATTCTTGGACT+AGG | 0.370563 | 6.1:+71852785 | None:intergenic |
| CTTTAGCATCAACTGCAAAA+AGG | 0.371050 | 6.1:+71853089 | None:intergenic |
| TGGTTGATTGAATATGGATT+AGG | 0.377800 | 6.1:-71851282 | MS.gene59980:CDS |
| TGACACAGAATCACAAAGAT+TGG | 0.380579 | 6.1:-71852384 | MS.gene59980:CDS |
| TTGCTTTCTGATTGAGTTGA+GGG | 0.381185 | 6.1:+71853454 | None:intergenic |
| ATGGCGAATGCAATGAGTTT+AGG | 0.385047 | 6.1:-71851834 | MS.gene59980:CDS |
| GGTGGAGGATCTTGATCTTC+CGG | 0.385688 | 6.1:-71852624 | MS.gene59980:CDS |
| CCTGATCTTGGAAAAGGCTT+AGG | 0.389440 | 6.1:-71852200 | MS.gene59980:CDS |
| ACAAAAGGAACTGAGGTTCT+TGG | 0.399972 | 6.1:+71853613 | None:intergenic |
| CGAGCTACATTATTGTCTAA+AGG | 0.400116 | 6.1:+71852131 | None:intergenic |
| CTGAACATTGGAATTTCTCT+TGG | 0.400561 | 6.1:+71853717 | None:intergenic |
| TTATCATCTTTAGTAGTAGA+TGG | 0.400868 | 6.1:+71853589 | None:intergenic |
| TTAGAGCCTCTAGTTCTTCA+AGG | 0.402903 | 6.1:+71853692 | None:intergenic |
| TCAGCAAGTTTATTAGTAGA+TGG | 0.405104 | 6.1:+71852659 | None:intergenic |
| TTTAAGGTGAGGAGTGGCAG+TGG | 0.406946 | 6.1:-71851354 | MS.gene59980:CDS |
| TTTGCTTTGTTCTCCCATCA+TGG | 0.411561 | 6.1:+71852412 | None:intergenic |
| TTGACTGAAGAAACTTCAAA+TGG | 0.412655 | 6.1:+71851663 | None:intergenic |
| ACAAGAAAGGGATATGGAAT+TGG | 0.413070 | 6.1:-71853399 | MS.gene59980:CDS |
| TTGTTAAGTGCAATTGATCA+TGG | 0.417669 | 6.1:+71852483 | None:intergenic |
| TTTCAAATTATGGGGAAAGA+TGG | 0.420725 | 6.1:-71852914 | MS.gene59980:CDS |
| GTATGAATTAACACCATCAT+AGG | 0.422907 | 6.1:+71851462 | None:intergenic |
| GACTCCTTCACAGAGAAGAT+TGG | 0.423545 | 6.1:-71852750 | MS.gene59980:CDS |
| GTGACAACAAGAAAGGGATA+TGG | 0.423970 | 6.1:-71853405 | MS.gene59980:CDS |
| CTTTAAACAAGTTTAACATC+TGG | 0.426101 | 6.1:+71851153 | None:intergenic |
| GAAGTTTCTTCAGTCAAAGA+AGG | 0.427467 | 6.1:-71851657 | MS.gene59980:CDS |
| AGAATTTGAAGCCTAGTAGT+AGG | 0.427655 | 6.1:-71852865 | MS.gene59980:CDS |
| ATGGAATTGGAAACCTATTA+GGG | 0.430442 | 6.1:-71853386 | MS.gene59980:CDS |
| CTTAATCCATTCATTGATGA+AGG | 0.431366 | 6.1:+71853292 | None:intergenic |
| CTGCTATTTCACTTGAGGAT+TGG | 0.432151 | 6.1:-71851608 | MS.gene59980:CDS |
| GAAAACATGCATTGGTAAAA+GGG | 0.433928 | 6.1:-71851242 | MS.gene59980:CDS |
| GAATATGGATTAGGAAAGGC+AGG | 0.436150 | 6.1:-71851273 | MS.gene59980:CDS |
| CAATTGATTCTTGAACCAAC+TGG | 0.437324 | 6.1:+71853032 | None:intergenic |
| ACTGCTTCGTATCTTCGTAT+TGG | 0.438785 | 6.1:+71851492 | None:intergenic |
| TCCCTTCCTTCATCAATGAA+TGG | 0.439406 | 6.1:-71853298 | MS.gene59980:CDS |
| GATGGATATGAATGATGAAC+TGG | 0.445751 | 6.1:+71852677 | None:intergenic |
| TATTGCAATCAACAAGGTAA+TGG | 0.448877 | 6.1:-71853151 | MS.gene59980:CDS |
| TTAGGAAAGGCAGGGAAGAA+AGG | 0.450861 | 6.1:-71851264 | MS.gene59980:CDS |
| TCTTGTGATGTTAACACAAA+AGG | 0.450999 | 6.1:+71852071 | None:intergenic |
| TATCTTCCTGATCTTGGAAA+AGG | 0.460068 | 6.1:-71852206 | MS.gene59980:CDS |
| GAGTTCGAGGTTGTTGATAG+AGG | 0.464622 | 6.1:-71852602 | MS.gene59980:CDS |
| CTGTTCAAACAATGCCATCA+AGG | 0.476825 | 6.1:-71853228 | MS.gene59980:CDS |
| AGGCATGCTAAACGATGTCT+TGG | 0.478557 | 6.1:+71852805 | None:intergenic |
| GCACCTTGAGAAACCCTTGA+TGG | 0.478880 | 6.1:+71853214 | None:intergenic |
| GCAAAGGTGGAATTTCAGAT+TGG | 0.482762 | 6.1:+71852285 | None:intergenic |
| CTCAGTGGATTTGAGCCAGT+TGG | 0.486575 | 6.1:-71853047 | MS.gene59980:CDS |
| AGTTTGCAAGGGAAAGCTAA+AGG | 0.488846 | 6.1:-71852962 | MS.gene59980:CDS |
| AGACAAGAAAGGATTTCAAC+AGG | 0.489466 | 6.1:-71851810 | MS.gene59980:CDS |
| AATTCAGGTGACAACAAGAA+AGG | 0.489798 | 6.1:-71853412 | MS.gene59980:CDS |
| TTAGTAGTAGATGGAACAAA+AGG | 0.490782 | 6.1:+71853598 | None:intergenic |
| TCTTGATCTTCCGGAGTTCG+AGG | 0.492407 | 6.1:-71852615 | MS.gene59980:CDS |
| GCAGTGGAAGGAAGAATGCT+TGG | 0.494216 | 6.1:-71851338 | MS.gene59980:CDS |
| TGCGACGCGACCGAGGTTTG+TGG | 0.494307 | 6.1:+71853533 | None:intergenic |
| AGGTATATCCAAAATGGTCT+TGG | 0.495736 | 6.1:+71853109 | None:intergenic |
| ATCCATTCATTGATGAAGGA+AGG | 0.495766 | 6.1:+71853296 | None:intergenic |
| GGAGAGCTGGTTGTGAAGCT+AGG | 0.500585 | 6.1:-71852938 | MS.gene59980:CDS |
| ATCGGCAAGGAAATCGAGTT+AGG | 0.500647 | 6.1:-71853003 | MS.gene59980:CDS |
| ACAAATCAAGAAGATGCAAC+TGG | 0.502022 | 6.1:-71853484 | MS.gene59980:CDS |
| AGGTGAGGAGTGGCAGTGGA+AGG | 0.504652 | 6.1:-71851350 | MS.gene59980:CDS |
| AGAAAGAAAGAGAATAAAGA+TGG | 0.506391 | 6.1:-71853253 | MS.gene59980:CDS |
| GAGTTCTGCTATTTCACTTG+AGG | 0.507526 | 6.1:-71851613 | MS.gene59980:CDS |
| GAAAGCTAAAGGAGGAGAGC+TGG | 0.509145 | 6.1:-71852951 | MS.gene59980:CDS |
| TTCTTCAAGGAGCTGAACAT+TGG | 0.510394 | 6.1:+71853705 | None:intergenic |
| ATTGCTTTCTGATTGAGTTG+AGG | 0.513069 | 6.1:+71853453 | None:intergenic |
| TTACCTATCAGTTCATCTAT+CGG | 0.516942 | 6.1:+71851966 | None:intergenic |
| GAAGAGAAGAAAGAAGATGA+AGG | 0.517230 | 6.1:-71852569 | MS.gene59980:CDS |
| TCCATTCATTGATGAAGGAA+GGG | 0.521094 | 6.1:+71853297 | None:intergenic |
| ATTCAGGTGACAACAAGAAA+GGG | 0.521622 | 6.1:-71853411 | MS.gene59980:CDS |
| CTATCAACAACCTCGAACTC+CGG | 0.524377 | 6.1:+71852605 | None:intergenic |
| CTGTTGTGTGTGATTGGTAA+AGG | 0.525386 | 6.1:+71853662 | None:intergenic |
| TGAGTTTAGGAAGACAAGAA+AGG | 0.525668 | 6.1:-71851821 | MS.gene59980:CDS |
| CAAATTATGGGGAAAGATGG+AGG | 0.529279 | 6.1:-71852911 | MS.gene59980:CDS |
| TGTTGTGTGTGATTGGTAAA+GGG | 0.529701 | 6.1:+71853663 | None:intergenic |
| ACTTGCTGATGACAAAGAAA+AGG | 0.530542 | 6.1:-71852645 | MS.gene59980:CDS |
| GAGCATTTCATCAAGAATCA+TGG | 0.531039 | 6.1:-71851205 | MS.gene59980:CDS |
| TCACAAACAGAAATGATGCT+TGG | 0.533449 | 6.1:-71852772 | MS.gene59980:CDS |
| GAAACAAGCTTTAGTTTGCA+AGG | 0.539137 | 6.1:-71852974 | MS.gene59980:CDS |
| CAGTGGAAGGAAGAATGCTT+GGG | 0.542967 | 6.1:-71851337 | MS.gene59980:CDS |
| GAAGAAAGGAAAACATGCAT+TGG | 0.544146 | 6.1:-71851250 | MS.gene59980:CDS |
| AAGTTTCTTCAGTCAAAGAA+GGG | 0.545160 | 6.1:-71851656 | MS.gene59980:CDS |
| ATGCCGATAGATGAACTGAT+AGG | 0.545841 | 6.1:-71851969 | MS.gene59980:CDS |
| AAAGGCTCTTGAATCCATGA+TGG | 0.546098 | 6.1:-71852426 | MS.gene59980:CDS |
| TAAAAGGGCAAGATTTGTTG+TGG | 0.547889 | 6.1:-71851227 | MS.gene59980:CDS |
| CAAGAATCATGGCTGATATG+TGG | 0.554668 | 6.1:-71851194 | MS.gene59980:CDS |
| ACAACAAATGTGGACACAAA+GGG | 0.555483 | 6.1:-71851441 | MS.gene59980:CDS |
| TCCGCCAATCTTCTCTGTGA+AGG | 0.559824 | 6.1:+71852746 | None:intergenic |
| AAGAAAGAAGATGAAGGAGA+AGG | 0.560474 | 6.1:-71852563 | MS.gene59980:CDS |
| AAGGAAATCGAGTTAGGCAG+TGG | 0.560767 | 6.1:-71852997 | MS.gene59980:CDS |
| TGGAAAAGGCTTAGGTTGTG+TGG | 0.563817 | 6.1:-71852192 | MS.gene59980:CDS |
| AAACAAGCTTTAGTTTGCAA+GGG | 0.571339 | 6.1:-71852973 | MS.gene59980:CDS |
| TGTGTGGTTCAAACAAGAGA+TGG | 0.571908 | 6.1:-71852176 | MS.gene59980:CDS |
| AGCAGTTGGAGGACCTATGA+TGG | 0.571988 | 6.1:-71851475 | MS.gene59980:CDS |
| CGAAGATACGAAGCAGTTGG+AGG | 0.576526 | 6.1:-71851486 | MS.gene59980:CDS |
| ATAGCTTCTGCTATCATACA+AGG | 0.577908 | 6.1:-71851915 | MS.gene59980:CDS |
| ATACAAGGTAGAAACAAAGA+AGG | 0.578846 | 6.1:-71851900 | MS.gene59980:CDS |
| CAAAGTAAGTAGCATGCATG+TGG | 0.579362 | 6.1:-71851382 | MS.gene59980:CDS |
| TCCTTCACAGAGAAGATTGG+CGG | 0.579560 | 6.1:-71852747 | MS.gene59980:CDS |
| GAAGCATTGAAAATTCAAGC+TGG | 0.579757 | 6.1:-71851705 | MS.gene59980:CDS |
| AGCTAGGATTTCAAATTATG+GGG | 0.581391 | 6.1:-71852922 | MS.gene59980:CDS |
| AAAGGCTAACTTCAATGCAA+TGG | 0.582504 | 6.1:-71851302 | MS.gene59980:CDS |
| GTTAATTCATACAACAAATG+TGG | 0.583537 | 6.1:-71851451 | MS.gene59980:CDS |
| TACAACAAATGTGGACACAA+AGG | 0.583821 | 6.1:-71851442 | MS.gene59980:CDS |
| GTCGCATGTCCTTATCTCCA+TGG | 0.585797 | 6.1:-71853516 | MS.gene59980:CDS |
| TGTTCAAACAATGCCATCAA+GGG | 0.586202 | 6.1:-71853227 | MS.gene59980:CDS |
| ATGAAGATGATGAGGAGAAG+AGG | 0.590017 | 6.1:-71851407 | MS.gene59980:CDS |
| ATACGAAGATACGAAGCAGT+TGG | 0.590846 | 6.1:-71851489 | MS.gene59980:CDS |
| GATTGAATATGGATTAGGAA+AGG | 0.591896 | 6.1:-71851277 | MS.gene59980:CDS |
| TGCTGATGACAAAGAAAAGG+TGG | 0.592702 | 6.1:-71852642 | MS.gene59980:CDS |
| GATGATAATTCTTCATCATG+TGG | 0.594745 | 6.1:-71852248 | MS.gene59980:CDS |
| TCATGTTCTTCAAGATGCAA+AGG | 0.596262 | 6.1:+71852269 | None:intergenic |
| ACCTTCAAGTGAAATTGTCA+AGG | 0.601896 | 6.1:-71852513 | MS.gene59980:CDS |
| CATGTTTATTGCAATCAACA+AGG | 0.603699 | 6.1:-71853157 | MS.gene59980:CDS |
| AAGGCTCTTGAATCCATGAT+GGG | 0.604383 | 6.1:-71852425 | MS.gene59980:CDS |
| CTTGGGAGAGTGAGAAACAA+AGG | 0.606419 | 6.1:-71851320 | MS.gene59980:CDS |
| AGAGTTTCTTCATATGCTTG+AGG | 0.610639 | 6.1:-71852336 | MS.gene59980:CDS |
| TGTTCTTCAAGATGCAAAGG+TGG | 0.611191 | 6.1:+71852272 | None:intergenic |
| TCAGCTCCTTGAAGAACTAG+AGG | 0.632926 | 6.1:-71853698 | MS.gene59980:CDS |
| GTCGAGCGAACGAAGATGTG+AGG | 0.635938 | 6.1:+71852834 | None:intergenic |
| AAGGACATGCGACGCGACCG+AGG | 0.637757 | 6.1:+71853526 | None:intergenic |
| AGTTTCGGCATTGAAAGACA+TGG | 0.642413 | 6.1:-71851853 | MS.gene59980:CDS |
| AAAGTAAGTAGCATGCATGT+GGG | 0.642780 | 6.1:-71851381 | MS.gene59980:CDS |
| TGATGACAAAGAAAAGGTGG+AGG | 0.643767 | 6.1:-71852639 | MS.gene59980:CDS |
| ATGCCATCAAGGGTTTCTCA+AGG | 0.644801 | 6.1:-71853217 | MS.gene59980:CDS |
| GTGGTTCAAACAAGAGATGG+AGG | 0.648990 | 6.1:-71852173 | MS.gene59980:CDS |
| TGATCATGATGAAGATGATG+AGG | 0.656905 | 6.1:-71851415 | MS.gene59980:CDS |
| GTAAGTAGCATGCATGTGGG+AGG | 0.667243 | 6.1:-71851378 | MS.gene59980:CDS |
| AGATGGAACAAAAGGAACTG+AGG | 0.670522 | 6.1:+71853606 | None:intergenic |
| AGGAAATCGAGTTAGGCAGT+GGG | 0.673151 | 6.1:-71852996 | MS.gene59980:CDS |
| AATATGGATTAGGAAAGGCA+GGG | 0.686442 | 6.1:-71851272 | MS.gene59980:CDS |
| GAGCAAGTTCAAGCGCTGCG+CGG | 0.689676 | 6.1:-71851878 | MS.gene59980:CDS |
| TTGCAAGGGAAAGCTAAAGG+AGG | 0.699520 | 6.1:-71852959 | MS.gene59980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATCAATTGAGAAAAAT+CGG | - | chr6.1:71851870-71851889 | MS.gene59980:CDS | 20.0% |
| ! | AAACAACTCTAATCCATTTA+AGG | + | chr6.1:71852848-71852867 | None:intergenic | 25.0% |
| ! | AAGCTAGGATTTCAAATTAT+GGG | - | chr6.1:71851968-71851987 | MS.gene59980:CDS | 25.0% |
| ! | AGAAAGAAAGAGAATAAAGA+TGG | - | chr6.1:71851638-71851657 | MS.gene59980:CDS | 25.0% |
| ! | GTTAATTCATACAACAAATG+TGG | - | chr6.1:71853440-71853459 | MS.gene59980:CDS | 25.0% |
| ! | TTATCATCTTTAGTAGTAGA+TGG | + | chr6.1:71851305-71851324 | None:intergenic | 25.0% |
| ! | TTTGATGAAAGAACAAATTC+AGG | - | chr6.1:71851464-71851483 | MS.gene59980:CDS | 25.0% |
| !!! | TGATTTGTTTTTGATTTCCA+TGG | + | chr6.1:71851395-71851414 | None:intergenic | 25.0% |
| !!! | TTGAAGAAACACTTTTTCTA+AGG | - | chr6.1:71851708-71851727 | MS.gene59980:CDS | 25.0% |
| AAAGGATTTCAACAGGTATT+TGG | - | chr6.1:71853088-71853107 | MS.gene59980:CDS | 30.0% | |
| AAGTTTCTTCAGTCAAAGAA+GGG | - | chr6.1:71853235-71853254 | MS.gene59980:CDS | 30.0% | |
| AATGCAGAAAATTGAGTTCA+TGG | - | chr6.1:71853158-71853177 | MS.gene59980:CDS | 30.0% | |
| AGCTAGGATTTCAAATTATG+GGG | - | chr6.1:71851969-71851988 | MS.gene59980:CDS | 30.0% | |
| ATACAAGGTAGAAACAAAGA+AGG | - | chr6.1:71852991-71853010 | MS.gene59980:CDS | 30.0% | |
| ATATGAGAAATTGCCCTAAT+AGG | + | chr6.1:71851521-71851540 | None:intergenic | 30.0% | |
| ATGCAATGGTTGATTGAATA+TGG | - | chr6.1:71853603-71853622 | MS.gene59980:CDS | 30.0% | |
| ATGGAATTGGAAACCTATTA+GGG | - | chr6.1:71851505-71851524 | MS.gene59980:CDS | 30.0% | |
| ATTAGGGCAATTTCTCATAT+TGG | - | chr6.1:71851521-71851540 | MS.gene59980:CDS | 30.0% | |
| CATGTTTATTGCAATCAACA+AGG | - | chr6.1:71851734-71851753 | MS.gene59980:CDS | 30.0% | |
| CTTAATCCATTCATTGATGA+AGG | + | chr6.1:71851602-71851621 | None:intergenic | 30.0% | |
| GAAGCTAGGATTTCAAATTA+TGG | - | chr6.1:71851967-71851986 | MS.gene59980:CDS | 30.0% | |
| GATGATAATTCTTCATCATG+TGG | - | chr6.1:71852643-71852662 | MS.gene59980:CDS | 30.0% | |
| GTATGAATTAACACCATCAT+AGG | + | chr6.1:71853432-71853451 | None:intergenic | 30.0% | |
| TATGAATGATGAACTGGATT+TGG | + | chr6.1:71852211-71852230 | None:intergenic | 30.0% | |
| TATGGAATTGGAAACCTATT+AGG | - | chr6.1:71851504-71851523 | MS.gene59980:CDS | 30.0% | |
| TATTGCAATCAACAAGGTAA+TGG | - | chr6.1:71851740-71851759 | MS.gene59980:CDS | 30.0% | |
| TCAGCAAGTTTATTAGTAGA+TGG | + | chr6.1:71852235-71852254 | None:intergenic | 30.0% | |
| TCATTTCTGTTTGTGATTCT+TGG | + | chr6.1:71852115-71852134 | None:intergenic | 30.0% | |
| TCTTGTGATGTTAACACAAA+AGG | + | chr6.1:71852823-71852842 | None:intergenic | 30.0% | |
| TGGTTGATTGAATATGGATT+AGG | - | chr6.1:71853609-71853628 | MS.gene59980:CDS | 30.0% | |
| TTACCTATCAGTTCATCTAT+CGG | + | chr6.1:71852928-71852947 | None:intergenic | 30.0% | |
| TTAGTAGTAGATGGAACAAA+AGG | + | chr6.1:71851296-71851315 | None:intergenic | 30.0% | |
| TTGACTGAAGAAACTTCAAA+TGG | + | chr6.1:71853231-71853250 | None:intergenic | 30.0% | |
| TTGTTAAGTGCAATTGATCA+TGG | + | chr6.1:71852411-71852430 | None:intergenic | 30.0% | |
| TTTCAAATTATGGGGAAAGA+TGG | - | chr6.1:71851977-71851996 | MS.gene59980:CDS | 30.0% | |
| ! | ATTAGAGTTGTTTCAGAAAC+TGG | - | chr6.1:71852855-71852874 | MS.gene59980:CDS | 30.0% |
| ! | CTCAATTTTCTGCATTGTAA+AGG | + | chr6.1:71853154-71853173 | None:intergenic | 30.0% |
| ! | GAAAACATGCATTGGTAAAA+GGG | - | chr6.1:71853649-71853668 | MS.gene59980:CDS | 30.0% |
| ! | GCAAAAAGGTATATCCAAAA+TGG | + | chr6.1:71851791-71851810 | None:intergenic | 30.0% |
| !! | AAACAAGCTTTAGTTTGCAA+GGG | - | chr6.1:71851918-71851937 | MS.gene59980:CDS | 30.0% |
| !! | GATTCAAATCATCGATTTCT+TGG | + | chr6.1:71852177-71852196 | None:intergenic | 30.0% |
| !! | GATTGAATATGGATTAGGAA+AGG | - | chr6.1:71853614-71853633 | MS.gene59980:CDS | 30.0% |
| !!! | CATTAGTGTTTTTAGAGCTT+TGG | + | chr6.1:71853317-71853336 | None:intergenic | 30.0% |
| !!! | TTTTGATTTCCATGGAGATA+AGG | + | chr6.1:71851387-71851406 | None:intergenic | 30.0% |
| AAAGGCTAACTTCAATGCAA+TGG | - | chr6.1:71853589-71853608 | MS.gene59980:CDS | 35.0% | |
| AAAGTAAGTAGCATGCATGT+GGG | - | chr6.1:71853510-71853529 | MS.gene59980:CDS | 35.0% | |
| AAGAAAGAAGATGAAGGAGA+AGG | - | chr6.1:71852328-71852347 | MS.gene59980:CDS | 35.0% | |
| AATTCAGGTGACAACAAGAA+AGG | - | chr6.1:71851479-71851498 | MS.gene59980:CDS | 35.0% | |
| ACAAATCAAGAAGATGCAAC+TGG | - | chr6.1:71851407-71851426 | MS.gene59980:CDS | 35.0% | |
| ACAACAAATGTGGACACAAA+GGG | - | chr6.1:71853450-71853469 | MS.gene59980:CDS | 35.0% | |
| ACAAGAAAGGGATATGGAAT+TGG | - | chr6.1:71851492-71851511 | MS.gene59980:CDS | 35.0% | |
| ACATCACAAGACTCCTTAAA+TGG | - | chr6.1:71852832-71852851 | MS.gene59980:CDS | 35.0% | |
| ACCTTCAAGTGAAATTGTCA+AGG | - | chr6.1:71852378-71852397 | MS.gene59980:CDS | 35.0% | |
| AGACAAGAAAGGATTTCAAC+AGG | - | chr6.1:71853081-71853100 | MS.gene59980:CDS | 35.0% | |
| AGAGTTTCTTCATATGCTTG+AGG | - | chr6.1:71852555-71852574 | MS.gene59980:CDS | 35.0% | |
| AGGTATATCCAAAATGGTCT+TGG | + | chr6.1:71851785-71851804 | None:intergenic | 35.0% | |
| ATAGCTTCTGCTATCATACA+AGG | - | chr6.1:71852976-71852995 | MS.gene59980:CDS | 35.0% | |
| ATCCATTCATTGATGAAGGA+AGG | + | chr6.1:71851598-71851617 | None:intergenic | 35.0% | |
| ATTCAGGTGACAACAAGAAA+GGG | - | chr6.1:71851480-71851499 | MS.gene59980:CDS | 35.0% | |
| CGAGCTACATTATTGTCTAA+AGG | + | chr6.1:71852763-71852782 | None:intergenic | 35.0% | |
| CTGAACATTGGAATTTCTCT+TGG | + | chr6.1:71851177-71851196 | None:intergenic | 35.0% | |
| CTTTAGCATCAACTGCAAAA+AGG | + | chr6.1:71851805-71851824 | None:intergenic | 35.0% | |
| GAAGAAAGGAAAACATGCAT+TGG | - | chr6.1:71853641-71853660 | MS.gene59980:CDS | 35.0% | |
| GAAGAGAAGAAAGAAGATGA+AGG | - | chr6.1:71852322-71852341 | MS.gene59980:CDS | 35.0% | |
| GAAGTTTCTTCAGTCAAAGA+AGG | - | chr6.1:71853234-71853253 | MS.gene59980:CDS | 35.0% | |
| GAGCATTTCATCAAGAATCA+TGG | - | chr6.1:71853686-71853705 | MS.gene59980:CDS | 35.0% | |
| GATGGATATGAATGATGAAC+TGG | + | chr6.1:71852217-71852236 | None:intergenic | 35.0% | |
| TACAACAAATGTGGACACAA+AGG | - | chr6.1:71853449-71853468 | MS.gene59980:CDS | 35.0% | |
| TATCTTCCTGATCTTGGAAA+AGG | - | chr6.1:71852685-71852704 | MS.gene59980:CDS | 35.0% | |
| TCAATTGAGAAAAATCGGCA+AGG | - | chr6.1:71851875-71851894 | MS.gene59980:CDS | 35.0% | |
| TCACAAACAGAAATGATGCT+TGG | - | chr6.1:71852119-71852138 | MS.gene59980:CDS | 35.0% | |
| TCATGTTCTTCAAGATGCAA+AGG | + | chr6.1:71852625-71852644 | None:intergenic | 35.0% | |
| TCCATTCATTGATGAAGGAA+GGG | + | chr6.1:71851597-71851616 | None:intergenic | 35.0% | |
| TCCTTGACAATTTCACTTGA+AGG | + | chr6.1:71852382-71852401 | None:intergenic | 35.0% | |
| TGACACAGAATCACAAAGAT+TGG | - | chr6.1:71852507-71852526 | MS.gene59980:CDS | 35.0% | |
| TGAGTTTAGGAAGACAAGAA+AGG | - | chr6.1:71853070-71853089 | MS.gene59980:CDS | 35.0% | |
| TGATCATGATGAAGATGATG+AGG | - | chr6.1:71853476-71853495 | MS.gene59980:CDS | 35.0% | |
| TGTTCAAACAATGCCATCAA+GGG | - | chr6.1:71851664-71851683 | MS.gene59980:CDS | 35.0% | |
| TGTTGTGTGTGATTGGTAAA+GGG | + | chr6.1:71851231-71851250 | None:intergenic | 35.0% | |
| ! | ACTTGCTGATGACAAAGAAA+AGG | - | chr6.1:71852246-71852265 | MS.gene59980:CDS | 35.0% |
| ! | AGAATTTGAAGCCTAGTAGT+AGG | - | chr6.1:71852026-71852045 | MS.gene59980:CDS | 35.0% |
| ! | AGAATTTTCTCTGCAGTTAG+TGG | + | chr6.1:71853129-71853148 | None:intergenic | 35.0% |
| ! | AGGTTTTTGAACCTACTACT+AGG | + | chr6.1:71852040-71852059 | None:intergenic | 35.0% |
| ! | ATTGCTTTCTGATTGAGTTG+AGG | + | chr6.1:71851441-71851460 | None:intergenic | 35.0% |
| ! | CAATTGATTCTTGAACCAAC+TGG | + | chr6.1:71851862-71851881 | None:intergenic | 35.0% |
| ! | GATGCTAAAGAGCTTGATTT+TGG | - | chr6.1:71851815-71851834 | MS.gene59980:CDS | 35.0% |
| ! | GGAAAACATGCATTGGTAAA+AGG | - | chr6.1:71853648-71853667 | MS.gene59980:CDS | 35.0% |
| ! | TTCACTTGCTAAGCAGATAA+AGG | - | chr6.1:71852447-71852466 | MS.gene59980:CDS | 35.0% |
| !! | AATATGGATTAGGAAAGGCA+GGG | - | chr6.1:71853619-71853638 | MS.gene59980:CDS | 35.0% |
| !! | GAAACAAGCTTTAGTTTGCA+AGG | - | chr6.1:71851917-71851936 | MS.gene59980:CDS | 35.0% |
| !! | GAAGCATTGAAAATTCAAGC+TGG | - | chr6.1:71853186-71853205 | MS.gene59980:CDS | 35.0% |
| !! | TAAAAGGGCAAGATTTGTTG+TGG | - | chr6.1:71853664-71853683 | MS.gene59980:CDS | 35.0% |
| !! | TGATTTTGGAAGAAACTCAG+TGG | - | chr6.1:71851829-71851848 | MS.gene59980:CDS | 35.0% |
| !! | TTGCTTTCTGATTGAGTTGA+GGG | + | chr6.1:71851440-71851459 | None:intergenic | 35.0% |
| AAAGGCTCTTGAATCCATGA+TGG | - | chr6.1:71852465-71852484 | MS.gene59980:CDS | 40.0% | |
| AAGGCTCTTGAATCCATGAT+GGG | - | chr6.1:71852466-71852485 | MS.gene59980:CDS | 40.0% | |
| ACAAAAACAGCCACAAACCT+CGG | - | chr6.1:71851348-71851367 | MS.gene59980:CDS | 40.0% | |
| ACAAAAGGAACTGAGGTTCT+TGG | + | chr6.1:71851281-71851300 | None:intergenic | 40.0% | |
| ACTGCTTCGTATCTTCGTAT+TGG | + | chr6.1:71853402-71853421 | None:intergenic | 40.0% | |
| AGATGGAACAAAAGGAACTG+AGG | + | chr6.1:71851288-71851307 | None:intergenic | 40.0% | |
| AGTTTGCAAGGGAAAGCTAA+AGG | - | chr6.1:71851929-71851948 | MS.gene59980:CDS | 40.0% | |
| ATACGAAGATACGAAGCAGT+TGG | - | chr6.1:71853402-71853421 | MS.gene59980:CDS | 40.0% | |
| ATGAAGATGATGAGGAGAAG+AGG | - | chr6.1:71853484-71853503 | MS.gene59980:CDS | 40.0% | |
| ATGCCGATAGATGAACTGAT+AGG | - | chr6.1:71852922-71852941 | MS.gene59980:CDS | 40.0% | |
| ATGGCGAATGCAATGAGTTT+AGG | - | chr6.1:71853057-71853076 | MS.gene59980:CDS | 40.0% | |
| CAAAGTAAGTAGCATGCATG+TGG | - | chr6.1:71853509-71853528 | MS.gene59980:CDS | 40.0% | |
| CAAATTATGGGGAAAGATGG+AGG | - | chr6.1:71851980-71851999 | MS.gene59980:CDS | 40.0% | |
| CAAGAATCATGGCTGATATG+TGG | - | chr6.1:71853697-71853716 | MS.gene59980:CDS | 40.0% | |
| CAAGTGTATCTTCCTGATCT+TGG | - | chr6.1:71852679-71852698 | MS.gene59980:CDS | 40.0% | |
| CTGTTCAAACAATGCCATCA+AGG | - | chr6.1:71851663-71851682 | MS.gene59980:CDS | 40.0% | |
| CTGTTGTGTGTGATTGGTAA+AGG | + | chr6.1:71851232-71851251 | None:intergenic | 40.0% | |
| CTGTTTGTGATTCTTGGACT+AGG | + | chr6.1:71852109-71852128 | None:intergenic | 40.0% | |
| GCAAAGGTGGAATTTCAGAT+TGG | + | chr6.1:71852609-71852628 | None:intergenic | 40.0% | |
| GTGACAACAAGAAAGGGATA+TGG | - | chr6.1:71851486-71851505 | MS.gene59980:CDS | 40.0% | |
| TCCCTTCCTTCATCAATGAA+TGG | - | chr6.1:71851593-71851612 | MS.gene59980:CDS | 40.0% | |
| TGATGACAAAGAAAAGGTGG+AGG | - | chr6.1:71852252-71852271 | MS.gene59980:CDS | 40.0% | |
| TGCTGATGACAAAGAAAAGG+TGG | - | chr6.1:71852249-71852268 | MS.gene59980:CDS | 40.0% | |
| TGTGTGGTTCAAACAAGAGA+TGG | - | chr6.1:71852715-71852734 | MS.gene59980:CDS | 40.0% | |
| TGTTCTTCAAGATGCAAAGG+TGG | + | chr6.1:71852622-71852641 | None:intergenic | 40.0% | |
| TTCTTCAAGGAGCTGAACAT+TGG | + | chr6.1:71851189-71851208 | None:intergenic | 40.0% | |
| ! | AGTTTCGGCATTGAAAGACA+TGG | - | chr6.1:71853038-71853057 | MS.gene59980:CDS | 40.0% |
| ! | AGTTTGAGCCAAGACCATTT+TGG | - | chr6.1:71851774-71851793 | MS.gene59980:CDS | 40.0% |
| ! | GACATTTGCATTGCTAGCTT+TGG | + | chr6.1:71852796-71852815 | None:intergenic | 40.0% |
| ! | TTCTAGCTGTTGTGTGTGAT+TGG | + | chr6.1:71851238-71851257 | None:intergenic | 40.0% |
| ! | TTTGCTTTGTTCTCCCATCA+TGG | + | chr6.1:71852482-71852501 | None:intergenic | 40.0% |
| !! | CTGCTATTTCACTTGAGGAT+TGG | - | chr6.1:71853283-71853302 | MS.gene59980:CDS | 40.0% |
| !! | GAATATGGATTAGGAAAGGC+AGG | - | chr6.1:71853618-71853637 | MS.gene59980:CDS | 40.0% |
| !! | GAGTTCTGCTATTTCACTTG+AGG | - | chr6.1:71853278-71853297 | MS.gene59980:CDS | 40.0% |
| !! | GCTGAACAGATTGCTTTTGA+AGG | - | chr6.1:71852952-71852971 | MS.gene59980:CDS | 40.0% |
| !! | TTAGAGCCTCTAGTTCTTCA+AGG | + | chr6.1:71851202-71851221 | None:intergenic | 40.0% |
| AAGGAAATCGAGTTAGGCAG+TGG | - | chr6.1:71851894-71851913 | MS.gene59980:CDS | 45.0% | |
| AGGAAATCGAGTTAGGCAGT+GGG | - | chr6.1:71851895-71851914 | MS.gene59980:CDS | 45.0% | |
| AGGCATGCTAAACGATGTCT+TGG | + | chr6.1:71852089-71852108 | None:intergenic | 45.0% | |
| ATCGGCAAGGAAATCGAGTT+AGG | - | chr6.1:71851888-71851907 | MS.gene59980:CDS | 45.0% | |
| ATGCCATCAAGGGTTTCTCA+AGG | - | chr6.1:71851674-71851693 | MS.gene59980:CDS | 45.0% | |
| CAGTGGAAGGAAGAATGCTT+GGG | - | chr6.1:71853554-71853573 | MS.gene59980:CDS | 45.0% | |
| CCTGATCTTGGAAAAGGCTT+AGG | - | chr6.1:71852691-71852710 | MS.gene59980:CDS | 45.0% | |
| CTATCAACAACCTCGAACTC+CGG | + | chr6.1:71852289-71852308 | None:intergenic | 45.0% | |
| CTTGGGAGAGTGAGAAACAA+AGG | - | chr6.1:71853571-71853590 | MS.gene59980:CDS | 45.0% | |
| GACTCCTTCACAGAGAAGAT+TGG | - | chr6.1:71852141-71852160 | MS.gene59980:CDS | 45.0% | |
| GTGGTTCAAACAAGAGATGG+AGG | - | chr6.1:71852718-71852737 | MS.gene59980:CDS | 45.0% | |
| TCAGCTCCTTGAAGAACTAG+AGG | - | chr6.1:71851193-71851212 | MS.gene59980:CDS | 45.0% | |
| TCCTTCACAGAGAAGATTGG+CGG | - | chr6.1:71852144-71852163 | MS.gene59980:CDS | 45.0% | |
| TTAGGAAAGGCAGGGAAGAA+AGG | - | chr6.1:71853627-71853646 | MS.gene59980:CDS | 45.0% | |
| TTGCAAGGGAAAGCTAAAGG+AGG | - | chr6.1:71851932-71851951 | MS.gene59980:CDS | 45.0% | |
| ! | CATGCATGTGGGAGGTTTTA+AGG | - | chr6.1:71853521-71853540 | MS.gene59980:CDS | 45.0% |
| ! | CCTAAGCCTTTTCCAAGATC+AGG | + | chr6.1:71852694-71852713 | None:intergenic | 45.0% |
| ! | GAGTTCGAGGTTGTTGATAG+AGG | - | chr6.1:71852289-71852308 | MS.gene59980:CDS | 45.0% |
| ! | TGGAAAAGGCTTAGGTTGTG+TGG | - | chr6.1:71852699-71852718 | MS.gene59980:CDS | 45.0% |
| !!! | ATGTGGGAGGTTTTAAGGTG+AGG | - | chr6.1:71853526-71853545 | MS.gene59980:CDS | 45.0% |
| AGCAGTTGGAGGACCTATGA+TGG | - | chr6.1:71853416-71853435 | MS.gene59980:CDS | 50.0% | |
| CGAAGATACGAAGCAGTTGG+AGG | - | chr6.1:71853405-71853424 | MS.gene59980:CDS | 50.0% | |
| GAAAGCTAAAGGAGGAGAGC+TGG | - | chr6.1:71851940-71851959 | MS.gene59980:CDS | 50.0% | |
| GCACCTTGAGAAACCCTTGA+TGG | + | chr6.1:71851680-71851699 | None:intergenic | 50.0% | |
| GCAGTGGAAGGAAGAATGCT+TGG | - | chr6.1:71853553-71853572 | MS.gene59980:CDS | 50.0% | |
| GGTGGAGGATCTTGATCTTC+CGG | - | chr6.1:71852267-71852286 | MS.gene59980:CDS | 50.0% | |
| GTAAGTAGCATGCATGTGGG+AGG | - | chr6.1:71853513-71853532 | MS.gene59980:CDS | 50.0% | |
| GTCGCATGTCCTTATCTCCA+TGG | - | chr6.1:71851375-71851394 | MS.gene59980:CDS | 50.0% | |
| TCCGCCAATCTTCTCTGTGA+AGG | + | chr6.1:71852148-71852167 | None:intergenic | 50.0% | |
| TCTTGATCTTCCGGAGTTCG+AGG | - | chr6.1:71852276-71852295 | MS.gene59980:CDS | 50.0% | |
| ! | CTCAGTGGATTTGAGCCAGT+TGG | - | chr6.1:71851844-71851863 | MS.gene59980:CDS | 50.0% |
| ! | TTTAAGGTGAGGAGTGGCAG+TGG | - | chr6.1:71853537-71853556 | MS.gene59980:CDS | 50.0% |
| !!! | GGAGGTTTTAAGGTGAGGAG+TGG | - | chr6.1:71853531-71853550 | MS.gene59980:CDS | 50.0% |
| GGAGAGCTGGTTGTGAAGCT+AGG | - | chr6.1:71851953-71851972 | MS.gene59980:CDS | 55.0% | |
| GTCGAGCGAACGAAGATGTG+AGG | + | chr6.1:71852060-71852079 | None:intergenic | 55.0% | |
| ! | AAGCGCTGCGCGGATAGTTT+CGG | - | chr6.1:71853023-71853042 | MS.gene59980:CDS | 55.0% |
| AGGTGAGGAGTGGCAGTGGA+AGG | - | chr6.1:71853541-71853560 | MS.gene59980:CDS | 60.0% | |
| ! | GAGCAAGTTCAAGCGCTGCG+CGG | - | chr6.1:71853013-71853032 | MS.gene59980:CDS | 60.0% |
| AAGGACATGCGACGCGACCG+AGG | + | chr6.1:71851368-71851387 | None:intergenic | 65.0% | |
| TGCGACGCGACCGAGGTTTG+TGG | + | chr6.1:71851361-71851380 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 71851155 | 71853758 | 71851155 | ID=MS.gene59980 |
| chr6.1 | mRNA | 71851155 | 71853758 | 71851155 | ID=MS.gene59980.t1;Parent=MS.gene59980 |
| chr6.1 | exon | 71851155 | 71853758 | 71851155 | ID=MS.gene59980.t1.exon1;Parent=MS.gene59980.t1 |
| chr6.1 | CDS | 71851155 | 71853758 | 71851155 | ID=cds.MS.gene59980.t1;Parent=MS.gene59980.t1 |
| Gene Sequence |
| Protein sequence |
