Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61153.t1 | XP_003604369.1 | 100 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 8.10E-139 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61153.t1 | G7JGX3 | 100.0 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 5.8e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene61153 | 0.801688 | 8.00E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene61153 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene04919 | MS.gene61153 | 0.801362 | 9.33E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene61153 | 0.810303 | 1.23E-50 | -1.69E-46 |
| MS.gene049411 | MS.gene61153 | 0.830356 | 3.08E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene61153 | 0.80809 | 3.67E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene61153 | 0.808854 | 2.52E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene61153 | 0.851312 | 9.63E-61 | -1.69E-46 |
| MS.gene051043 | MS.gene61153 | 0.821381 | 4.16E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene61153 | 0.844335 | 8.06E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene61153 | 0.827821 | 1.27E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene61153 | 0.811995 | 5.30E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene61153 | 0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene053083 | MS.gene61153 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene61153 | 0.819383 | 1.20E-52 | -1.69E-46 |
| MS.gene053228 | MS.gene61153 | 0.814322 | 1.63E-51 | -1.69E-46 |
| MS.gene053427 | MS.gene61153 | 0.855635 | 5.53E-62 | -1.69E-46 |
| MS.gene054004 | MS.gene61153 | 0.880319 | 6.05E-70 | -1.69E-46 |
| MS.gene054005 | MS.gene61153 | 0.836356 | 9.82E-57 | -1.69E-46 |
| MS.gene054413 | MS.gene61153 | 0.841376 | 4.93E-58 | -1.69E-46 |
| MS.gene055150 | MS.gene61153 | 0.813938 | 1.99E-51 | -1.69E-46 |
| MS.gene055339 | MS.gene61153 | 0.835116 | 2.02E-56 | -1.69E-46 |
| MS.gene055765 | MS.gene61153 | 0.82558 | 4.34E-54 | -1.69E-46 |
| MS.gene055886 | MS.gene61153 | 0.822202 | 2.69E-53 | -1.69E-46 |
| MS.gene056530 | MS.gene61153 | 0.808257 | 3.38E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene61153 | 0.812695 | 3.73E-51 | -1.69E-46 |
| MS.gene056693 | MS.gene61153 | 0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene056881 | MS.gene61153 | 0.829024 | 6.49E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene61153 | -0.817879 | 2.62E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene61153 | 0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene61153 | 0.854167 | 1.47E-61 | -1.69E-46 |
| MS.gene059802 | MS.gene61153 | 0.845567 | 3.75E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene61153 | -0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene059949 | MS.gene61153 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene61153 | 0.806837 | 6.78E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene61153 | 0.815001 | 1.16E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene61153 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene61153 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene61153 | 0.818129 | 2.30E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene61153 | 0.831658 | 1.47E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61153.t1 | MTR_4g010100 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 545 |
| MS.gene61153.t1 | MTR_2g104010 | 67.790 | 267 | 77 | 6 | 1 | 264 | 1 | 261 | 9.44e-117 | 335 |
| MS.gene61153.t1 | MTR_8g086400 | 86.441 | 59 | 8 | 0 | 172 | 230 | 11 | 69 | 2.86e-28 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61153.t1 | AT5G32440 | 48.699 | 269 | 128 | 4 | 1 | 264 | 1 | 264 | 9.01e-70 | 216 |
| MS.gene61153.t1 | AT5G32440 | 48.327 | 269 | 130 | 3 | 1 | 264 | 1 | 265 | 2.14e-68 | 213 |
| MS.gene61153.t1 | AT1G80040 | 40.377 | 265 | 140 | 4 | 1 | 264 | 1 | 248 | 8.08e-56 | 180 |
| MS.gene61153.t1 | AT1G80040 | 45.324 | 139 | 76 | 0 | 126 | 264 | 37 | 175 | 6.59e-40 | 136 |
| MS.gene61153.t1 | AT5G32440 | 46.561 | 189 | 91 | 4 | 1 | 184 | 1 | 184 | 8.85e-32 | 116 |
| MS.gene61153.t1 | AT5G02510 | 32.271 | 251 | 140 | 6 | 20 | 264 | 27 | 253 | 1.20e-30 | 115 |
| MS.gene61153.t1 | AT1G80040 | 37.097 | 186 | 99 | 4 | 1 | 185 | 1 | 169 | 8.54e-27 | 103 |
| MS.gene61153.t1 | AT5G02510 | 39.568 | 139 | 77 | 3 | 128 | 264 | 46 | 179 | 1.30e-26 | 102 |
| MS.gene61153.t1 | AT5G02510 | 39.568 | 139 | 77 | 3 | 128 | 264 | 55 | 188 | 2.17e-26 | 102 |
| MS.gene61153.t1 | AT1G80040 | 35.025 | 197 | 99 | 5 | 1 | 185 | 1 | 180 | 1.05e-23 | 95.1 |
Find 58 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGATCATTGTCACATTCT+TGG | 0.223882 | 4.2:-90111215 | None:intergenic |
| GGAGCTGCAGGTGGGAATTC+TGG | 0.255949 | 4.2:+90111273 | MS.gene61153:CDS |
| TGATTTAATTAGAAGATATC+AGG | 0.319834 | 4.2:-90113525 | None:intergenic |
| GCAAATCGAAGTGCTGATTA+AGG | 0.357388 | 4.2:+90112665 | MS.gene61153:CDS |
| CTTCTCCTCCTTTATCTAAG+AGG | 0.373616 | 4.2:+90109730 | MS.gene61153:CDS |
| CCGTAATCTCTTCCCTCATA+TGG | 0.383614 | 4.2:+90109818 | MS.gene61153:CDS |
| GAGCCTGAATGAGCTTTACT+TGG | 0.410114 | 4.2:+90111251 | MS.gene61153:CDS |
| CTCCCAAGTAAAGCTCATTC+AGG | 0.411818 | 4.2:-90111254 | None:intergenic |
| CCATATGAGGGAAGAGATTA+CGG | 0.421515 | 4.2:-90109818 | None:intergenic |
| CAACGAAGCCTCTTAGATAA+AGG | 0.428199 | 4.2:-90109738 | None:intergenic |
| CTTCCCTCATATGGACCAAT+TGG | 0.432862 | 4.2:+90109827 | MS.gene61153:CDS |
| ATCCATTCGGCTCCATCTGC+AGG | 0.436105 | 4.2:-90112000 | None:intergenic |
| GAGCTTTACTTGGGAGCTGC+AGG | 0.442768 | 4.2:+90111261 | MS.gene61153:CDS |
| CGAGAAATCAATCAGTGAAC+GGG | 0.443703 | 4.2:+90112104 | MS.gene61153:CDS |
| AGTACCAATTGGTCCATATG+AGG | 0.447278 | 4.2:-90109831 | None:intergenic |
| CAACAGAGCAACGGATTTCA+AGG | 0.451603 | 4.2:+90113492 | MS.gene61153:CDS |
| ACAGATGAATAACTATGCTT+TGG | 0.452596 | 4.2:+90113449 | MS.gene61153:intron |
| TCAAAGAGAGAAGGAATAGT+TGG | 0.466372 | 4.2:-90109789 | None:intergenic |
| CAGTGAACGGGCAAGGGCTG+AGG | 0.469163 | 4.2:+90112116 | MS.gene61153:CDS |
| TTTGGCAATGCATTTGAAGC+AGG | 0.476717 | 4.2:+90113467 | MS.gene61153:CDS |
| GGAATAGTTGGAAAACGAAT+CGG | 0.490884 | 4.2:-90109777 | None:intergenic |
| AGCCCGTGCTGCTAGAATGC+TGG | 0.490982 | 4.2:+90112074 | MS.gene61153:CDS |
| TCAGGAAAATTTGATGCTGA+AGG | 0.495369 | 4.2:+90112641 | MS.gene61153:intron |
| ATTGCAGCATTTGAAGCAGT+TGG | 0.502947 | 4.2:+90112761 | MS.gene61153:CDS |
| CTCTTAGATAAAGGAGGAGA+AGG | 0.510276 | 4.2:-90109729 | None:intergenic |
| CTCCAGCATTCTAGCAGCAC+GGG | 0.511638 | 4.2:-90112076 | None:intergenic |
| TTGAACAGCCTTCCTGCAGA+TGG | 0.513895 | 4.2:+90111988 | MS.gene61153:CDS |
| AATCAGAAAGACGCTCGTGC+TGG | 0.519052 | 4.2:-90112719 | None:intergenic |
| CAAGAGTTCTGATCTGCTCC+TGG | 0.529738 | 4.2:-90112794 | None:intergenic |
| CTTTACTTGGGAGCTGCAGG+TGG | 0.530988 | 4.2:+90111264 | MS.gene61153:CDS |
| ATCAATCAGTGAACGGGCAA+GGG | 0.532900 | 4.2:+90112110 | MS.gene61153:CDS |
| AATCAATCAGTGAACGGGCA+AGG | 0.533202 | 4.2:+90112109 | MS.gene61153:CDS |
| GCAGTTGGCGTCTCAATACC+AGG | 0.534548 | 4.2:+90112776 | MS.gene61153:CDS |
| GCAGGTAAATTGGAGAATGA+TGG | 0.544065 | 4.2:+90111934 | MS.gene61153:intron |
| ATCCACATTGACATCAATCT+CGG | 0.564292 | 4.2:-90111310 | None:intergenic |
| TTTAATTAGAAGATATCAGG+TGG | 0.570495 | 4.2:-90113522 | None:intergenic |
| ATTGATGTCAATGTGGATGC+AGG | 0.578194 | 4.2:+90111315 | MS.gene61153:CDS |
| TTAGATAAAGGAGGAGAAGG+AGG | 0.578473 | 4.2:-90109726 | None:intergenic |
| AGCCTGAATGAGCTTTACTT+GGG | 0.578573 | 4.2:+90111252 | MS.gene61153:CDS |
| CGGAGCTGATCAAAGAGAGA+AGG | 0.579956 | 4.2:-90109798 | None:intergenic |
| CAGGTAAATTGGAGAATGAT+GGG | 0.588643 | 4.2:+90111935 | MS.gene61153:intron |
| GTACCAATTGGTCCATATGA+GGG | 0.594924 | 4.2:-90109830 | None:intergenic |
| TCGAGAAATCAATCAGTGAA+CGG | 0.595325 | 4.2:+90112103 | MS.gene61153:CDS |
| ACGAATCGGAGAAGTAGAAG+AGG | 0.605128 | 4.2:-90109763 | None:intergenic |
| CCTCCAGCATTCTAGCAGCA+CGG | 0.612473 | 4.2:-90112077 | None:intergenic |
| GGCGACAGATGCTCTTCAGA+AGG | 0.617799 | 4.2:+90112137 | MS.gene61153:CDS |
| AAGCAGGCTCAACAGAGCAA+CGG | 0.619847 | 4.2:+90113483 | MS.gene61153:CDS |
| ATTCGGCTCCATCTGCAGGA+AGG | 0.623660 | 4.2:-90111996 | None:intergenic |
| CCGTGCTGCTAGAATGCTGG+AGG | 0.628538 | 4.2:+90112077 | MS.gene61153:CDS |
| GGCTCTAGCATCATCAACAC+TGG | 0.633203 | 4.2:-90112055 | None:intergenic |
| TTAATTAGAAGATATCAGGT+GGG | 0.635471 | 4.2:-90113521 | None:intergenic |
| TTTACTTGGGAGCTGCAGGT+GGG | 0.636819 | 4.2:+90111265 | MS.gene61153:CDS |
| ACGATGTCTGCTGCTGTGTG+CGG | 0.637537 | 4.2:+90109672 | None:intergenic |
| GGAGCAGATCAGAACTCTTG+AGG | 0.638754 | 4.2:+90112797 | MS.gene61153:CDS |
| CGAAGCCTCTTAGATAAAGG+AGG | 0.640265 | 4.2:-90109735 | None:intergenic |
| TTCCTGCAGATGGAGCCGAA+TGG | 0.648905 | 4.2:+90111998 | MS.gene61153:CDS |
| AACAGAGCAACGGATTTCAA+GGG | 0.652217 | 4.2:+90113493 | MS.gene61153:CDS |
| ATCCGAGATTGATGTCAATG+TGG | 0.731294 | 4.2:+90111308 | MS.gene61153:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAAATATTAATACA+AGG | - | chr4.2:90111175-90111194 | None:intergenic | 10.0% |
| !! | AAGTTAAAATATTAATACAA+GGG | - | chr4.2:90111174-90111193 | None:intergenic | 10.0% |
| !! | ATAAATCAAAATTCAAAAAA+TGG | - | chr4.2:90109870-90109889 | None:intergenic | 10.0% |
| !!! | AATTGTTGTTTTTTTAATAA+GGG | + | chr4.2:90110926-90110945 | MS.gene61153:intron | 10.0% |
| !!! | CTTTTTTTTTTTTTTTTTTG+TGG | - | chr4.2:90111629-90111648 | None:intergenic | 10.0% |
| !!! | TAATTGTTGTTTTTTTAATA+AGG | + | chr4.2:90110925-90110944 | MS.gene61153:intron | 10.0% |
| !!! | TTGTTTTATTATTTGAATTT+GGG | + | chr4.2:90110177-90110196 | MS.gene61153:intron | 10.0% |
| !! | AAAATTCAAAAAATGGAAAA+AGG | - | chr4.2:90109863-90109882 | None:intergenic | 15.0% |
| !!! | GTATTAATATTTTAACTTTC+AGG | + | chr4.2:90111176-90111195 | MS.gene61153:intron | 15.0% |
| !!! | GTTGTTTTATTATTTGAATT+TGG | + | chr4.2:90110176-90110195 | MS.gene61153:intron | 15.0% |
| !!! | GTTTAGTTGTTATTTAATTT+CGG | + | chr4.2:90110345-90110364 | MS.gene61153:intron | 15.0% |
| !!! | TTTAGTTGTTATTTAATTTC+GGG | + | chr4.2:90110346-90110365 | MS.gene61153:intron | 15.0% |
| !! | CTAAATATGTGTTTATAAGT+GGG | + | chr4.2:90112471-90112490 | MS.gene61153:intron | 20.0% |
| !! | GACAAAAATAATTTGAATTG+AGG | + | chr4.2:90110221-90110240 | MS.gene61153:intron | 20.0% |
| !! | TAAATATGTGTTTATAAGTG+GGG | + | chr4.2:90112472-90112491 | MS.gene61153:intron | 20.0% |
| !!! | AATTGTTGTTTTTCTAACAA+GGG | + | chr4.2:90110088-90110107 | MS.gene61153:intron | 20.0% |
| !!! | ATTCTTTTAAAAACGCATTT+AGG | + | chr4.2:90112694-90112713 | MS.gene61153:CDS | 20.0% |
| !!! | TAATTGTTGTTTTTCTAACA+AGG | + | chr4.2:90110087-90110106 | MS.gene61153:intron | 20.0% |
| !!! | TGAAGATGTTTTTTTTATGA+GGG | + | chr4.2:90110279-90110298 | MS.gene61153:intron | 20.0% |
| !!! | TGTATTACTATTTTGTGATA+TGG | + | chr4.2:90111796-90111815 | MS.gene61153:intron | 20.0% |
| !!! | TGTGTGAATTTTTTAAAGAT+AGG | + | chr4.2:90112900-90112919 | MS.gene61153:intron | 20.0% |
| !!! | TTTATGTTTAGTTTAATGCA+TGG | + | chr4.2:90109985-90110004 | MS.gene61153:intron | 20.0% |
| ! | AAAATTCACACAAAGTTACA+AGG | - | chr4.2:90112892-90112911 | None:intergenic | 25.0% |
| ! | AAAGGAAAATTAGTACCAAT+TGG | - | chr4.2:90109845-90109864 | None:intergenic | 25.0% |
| ! | AAATATGTGTTTATAAGTGG+GGG | + | chr4.2:90112473-90112492 | MS.gene61153:intron | 25.0% |
| ! | AACAAAAAAGTCAATCCATT+CGG | - | chr4.2:90112016-90112035 | None:intergenic | 25.0% |
| ! | AAGAGGATGAAAGAAATAAA+AGG | - | chr4.2:90111539-90111558 | None:intergenic | 25.0% |
| ! | AATTTGACAGTGAACAAAAA+AGG | - | chr4.2:90112839-90112858 | None:intergenic | 25.0% |
| ! | AGAGGATGAAAGAAATAAAA+GGG | - | chr4.2:90111538-90111557 | None:intergenic | 25.0% |
| ! | AGTCCATACAAGTTAATAAA+AGG | - | chr4.2:90110729-90110748 | None:intergenic | 25.0% |
| ! | CAAATAAATGTTTGGCTAAT+TGG | + | chr4.2:90111353-90111372 | MS.gene61153:intron | 25.0% |
| ! | CCACTTATAAACACATATTT+AGG | - | chr4.2:90112473-90112492 | None:intergenic | 25.0% |
| ! | CCTAAATATGTGTTTATAAG+TGG | + | chr4.2:90112470-90112489 | MS.gene61153:intron | 25.0% |
| ! | GACAATTTGAATTGAGTAAT+TGG | + | chr4.2:90110443-90110462 | MS.gene61153:intron | 25.0% |
| ! | GTAATGAAAGAGATATTTGA+TGG | + | chr4.2:90111089-90111108 | MS.gene61153:intron | 25.0% |
| ! | GTTTGACGGTAATTAAATAA+CGG | + | chr4.2:90110750-90110769 | MS.gene61153:intron | 25.0% |
| ! | TTCAACACTATTAATGGTTT+AGG | + | chr4.2:90112544-90112563 | MS.gene61153:intron | 25.0% |
| ! | TTGTAGATTTAAAAGTGAGT+GGG | + | chr4.2:90113149-90113168 | MS.gene61153:intron | 25.0% |
| ! | TTTGTAGATTTAAAAGTGAG+TGG | + | chr4.2:90113148-90113167 | MS.gene61153:intron | 25.0% |
| !! | AAAAAAGACCTGATTTTGAA+TGG | + | chr4.2:90110687-90110706 | MS.gene61153:intron | 25.0% |
| !! | ACCATTAATAGTGTTGAAAT+TGG | - | chr4.2:90112542-90112561 | None:intergenic | 25.0% |
| !! | ATTTTATATACACTCCTCTT+TGG | + | chr4.2:90111715-90111734 | MS.gene61153:intron | 25.0% |
| !! | CACAAGATGTTTAAATTTTC+AGG | + | chr4.2:90112623-90112642 | MS.gene61153:intron | 25.0% |
| !! | CCATTAATAGTGTTGAAATT+GGG | - | chr4.2:90112541-90112560 | None:intergenic | 25.0% |
| !! | GTTTGTTTGTTTCTTATGAA+GGG | + | chr4.2:90110948-90110967 | MS.gene61153:intron | 25.0% |
| !! | TGAATGAGATATTTTGTGTT+TGG | + | chr4.2:90111019-90111038 | MS.gene61153:intron | 25.0% |
| !! | TTTCATATTTTGCGAAACAA+TGG | + | chr4.2:90111417-90111436 | MS.gene61153:intron | 25.0% |
| !!! | CTACTCTTTTTATTTAGTTC+AGG | + | chr4.2:90111063-90111082 | MS.gene61153:intron | 25.0% |
| !!! | CTGAAGATGTTTTTTTTATG+AGG | + | chr4.2:90110278-90110297 | MS.gene61153:intron | 25.0% |
| !!! | GTGATTGTTGTTTTCTAATA+AGG | + | chr4.2:90110517-90110536 | MS.gene61153:intron | 25.0% |
| !!! | TCTTTTTATTTAGTTCAGGA+GGG | + | chr4.2:90111067-90111086 | MS.gene61153:intron | 25.0% |
| !!! | TTTTTTGTGGTAAATAGAGA+GGG | - | chr4.2:90111616-90111635 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTGGTAAATAGAG+AGG | - | chr4.2:90111617-90111636 | None:intergenic | 25.0% |
| AACAAGGATTGTTGAACTAT+CGG | + | chr4.2:90112238-90112257 | MS.gene61153:intron | 30.0% | |
| AATGATCTGTTGACAAGTAA+TGG | + | chr4.2:90111851-90111870 | MS.gene61153:intron | 30.0% | |
| AATTGAGCAACTGATTATGT+TGG | + | chr4.2:90110141-90110160 | MS.gene61153:intron | 30.0% | |
| ACAAGCAAATTAGTTAAGTG+TGG | + | chr4.2:90113329-90113348 | MS.gene61153:intron | 30.0% | |
| ACAGATGAATAACTATGCTT+TGG | + | chr4.2:90113449-90113468 | MS.gene61153:intron | 30.0% | |
| ACAGTGAACAAAAAAGGATA+AGG | - | chr4.2:90112833-90112852 | None:intergenic | 30.0% | |
| AGCTACAAGATTGAAAACAT+TGG | - | chr4.2:90111483-90111502 | None:intergenic | 30.0% | |
| AGTTGTATCTGAGTTTAAGA+TGG | + | chr4.2:90110055-90110074 | MS.gene61153:intron | 30.0% | |
| ATATAAAATGTGCATGTGTG+TGG | - | chr4.2:90111704-90111723 | None:intergenic | 30.0% | |
| ATGAAAGAGATATTTGATGG+AGG | + | chr4.2:90111092-90111111 | MS.gene61153:intron | 30.0% | |
| ATTTGTGAAGATAATACCGT+GGG | + | chr4.2:90112390-90112409 | MS.gene61153:intron | 30.0% | |
| CAAGCAAATTAGTTAAGTGT+GGG | + | chr4.2:90113330-90113349 | MS.gene61153:intron | 30.0% | |
| CCCAATTTCAACACTATTAA+TGG | + | chr4.2:90112538-90112557 | MS.gene61153:intron | 30.0% | |
| CTTCATGATGATAATTTCAG+AGG | + | chr4.2:90112996-90113015 | MS.gene61153:intron | 30.0% | |
| GAGGATGAAAGAAATAAAAG+GGG | - | chr4.2:90111537-90111556 | None:intergenic | 30.0% | |
| TACAATTTCAGAGTGCAAAT+TGG | - | chr4.2:90110628-90110647 | None:intergenic | 30.0% | |
| TATAAAATGTGCATGTGTGT+GGG | - | chr4.2:90111703-90111722 | None:intergenic | 30.0% | |
| TATTTGTGAAGATAATACCG+TGG | + | chr4.2:90112389-90112408 | MS.gene61153:intron | 30.0% | |
| TGAAAGAGATATTTGATGGA+GGG | + | chr4.2:90111093-90111112 | MS.gene61153:intron | 30.0% | |
| TGAAGATGGTTAGATTAGAT+GGG | + | chr4.2:90110495-90110514 | MS.gene61153:intron | 30.0% | |
| TTAAGATACATACTCAACTG+AGG | - | chr4.2:90112600-90112619 | None:intergenic | 30.0% | |
| TTGAAGATGGTTAGATTAGA+TGG | + | chr4.2:90110494-90110513 | MS.gene61153:intron | 30.0% | |
| TTGCCTATTTGCAAATTTCA+AGG | + | chr4.2:90110779-90110798 | MS.gene61153:intron | 30.0% | |
| TTGCTTGTCTGAATATAACA+AGG | - | chr4.2:90113317-90113336 | None:intergenic | 30.0% | |
| ! | AATGTTTTCAATCTTGTAGC+TGG | + | chr4.2:90111482-90111501 | MS.gene61153:intron | 30.0% |
| ! | ACTATTTTGTGATATGGACA+AGG | + | chr4.2:90111802-90111821 | MS.gene61153:intron | 30.0% |
| ! | ATAAAAAAGTGTGACCAAAG+AGG | - | chr4.2:90111732-90111751 | None:intergenic | 30.0% |
| ! | ATATTTTGTGTTTGGTTGAG+CGG | + | chr4.2:90111027-90111046 | MS.gene61153:intron | 30.0% |
| ! | CTATTTTGTGATATGGACAA+GGG | + | chr4.2:90111803-90111822 | MS.gene61153:intron | 30.0% |
| ! | GGTTTGTTTGTTTCTTATGA+AGG | + | chr4.2:90110947-90110966 | MS.gene61153:intron | 30.0% |
| ! | TGAGTTTAAGATGGTTAGAT+TGG | + | chr4.2:90110064-90110083 | MS.gene61153:intron | 30.0% |
| !! | AATTTGCACTCTGAAATTGT+AGG | + | chr4.2:90110627-90110646 | MS.gene61153:intron | 30.0% |
| !! | ATTTTGACACCGTTCTTTAA+CGG | + | chr4.2:90112928-90112947 | MS.gene61153:intron | 30.0% |
| !! | CTCTTTTTATTTAGTTCAGG+AGG | + | chr4.2:90111066-90111085 | MS.gene61153:intron | 30.0% |
| !! | TTAAAACTGTTTTTCCTAGC+AGG | + | chr4.2:90112190-90112209 | MS.gene61153:intron | 30.0% |
| !!! | ATATTGACTCCTTTTAACCA+AGG | - | chr4.2:90112868-90112887 | None:intergenic | 30.0% |
| !!! | CTTTTTTGTTCGAGAAATGA+TGG | + | chr4.2:90112026-90112045 | MS.gene61153:CDS | 30.0% |
| !!! | GGTCCTTTTATTAACTTGTA+TGG | + | chr4.2:90110723-90110742 | MS.gene61153:intron | 30.0% |
| !!! | TATTGACTCCTTTTAACCAA+GGG | - | chr4.2:90112867-90112886 | None:intergenic | 30.0% |
| !!! | TTTTGAGACTTGTTTGTTTG+AGG | + | chr4.2:90112278-90112297 | MS.gene61153:intron | 30.0% |
| AAAGAGTGATGTGACTACAT+AGG | + | chr4.2:90112961-90112980 | MS.gene61153:intron | 35.0% | |
| AATGTACAAAAGCTGAAGCT+TGG | - | chr4.2:90113381-90113400 | None:intergenic | 35.0% | |
| AATGTCCTTTGTGAAGAACA+AGG | + | chr4.2:90112222-90112241 | MS.gene61153:intron | 35.0% | |
| ACAATCCTTGTTCTTCACAA+AGG | - | chr4.2:90112230-90112249 | None:intergenic | 35.0% | |
| ATAAAATGTGCATGTGTGTG+GGG | - | chr4.2:90111702-90111721 | None:intergenic | 35.0% | |
| ATACTCAACTGAGGATAACA+GGG | - | chr4.2:90112591-90112610 | None:intergenic | 35.0% | |
| ATCCACATTGACATCAATCT+CGG | - | chr4.2:90111313-90111332 | None:intergenic | 35.0% | |
| ATTGTTCACCCTTGGTTAAA+AGG | + | chr4.2:90112856-90112875 | MS.gene61153:intron | 35.0% | |
| CAGGTAAATTGGAGAATGAT+GGG | + | chr4.2:90111935-90111954 | MS.gene61153:intron | 35.0% | |
| CCACCTTGAAATTTGCAAAT+AGG | - | chr4.2:90110785-90110804 | None:intergenic | 35.0% | |
| CCTATTTGCAAATTTCAAGG+TGG | + | chr4.2:90110782-90110801 | MS.gene61153:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | - | chr4.2:90112517-90112536 | None:intergenic | 35.0% | |
| CTAGATCATTGTCACATTCT+TGG | - | chr4.2:90111218-90111237 | None:intergenic | 35.0% | |
| GAAAAACTGTGCAGGTAAAT+TGG | + | chr4.2:90111924-90111943 | MS.gene61153:intron | 35.0% | |
| GGAATAGTTGGAAAACGAAT+CGG | - | chr4.2:90109780-90109799 | None:intergenic | 35.0% | |
| TCAAAGAGAGAAGGAATAGT+TGG | - | chr4.2:90109792-90109811 | None:intergenic | 35.0% | |
| TCAGGAAAATTTGATGCTGA+AGG | + | chr4.2:90112641-90112660 | MS.gene61153:intron | 35.0% | |
| TCGAGAAATCAATCAGTGAA+CGG | + | chr4.2:90112103-90112122 | MS.gene61153:CDS | 35.0% | |
| TGAAAACTCCAAAGTCCAAA+TGG | - | chr4.2:90111392-90111411 | None:intergenic | 35.0% | |
| TGTTTCTTATGAAGGGAAGA+GGG | + | chr4.2:90110955-90110974 | MS.gene61153:intron | 35.0% | |
| TTGTCTACTTGCAAAGTTCA+AGG | + | chr4.2:90110826-90110845 | MS.gene61153:intron | 35.0% | |
| TTTGTGAAGATAATACCGTG+GGG | + | chr4.2:90112391-90112410 | MS.gene61153:intron | 35.0% | |
| TTTGTTGACCATTTGGACTT+TGG | + | chr4.2:90111381-90111400 | MS.gene61153:intron | 35.0% | |
| ! | AGTTGTATCTGAGTTGAAGA+TGG | + | chr4.2:90110481-90110500 | MS.gene61153:intron | 35.0% |
| ! | TTGTTTCTTATGAAGGGAAG+AGG | + | chr4.2:90110954-90110973 | MS.gene61153:intron | 35.0% |
| ! | TTTTGACACCGTTCTTTAAC+GGG | + | chr4.2:90112929-90112948 | MS.gene61153:intron | 35.0% |
| !! | ACTTGTATGGACTAGTTTGA+CGG | + | chr4.2:90110736-90110755 | MS.gene61153:intron | 35.0% |
| !! | CAGAGGTTCATATTGATTCT+CGG | + | chr4.2:90113013-90113032 | MS.gene61153:intron | 35.0% |
| !! | CAGTTTTGTAAGGATGAGTT+AGG | + | chr4.2:90112515-90112534 | MS.gene61153:intron | 35.0% |
| !! | GGTGTTGGCAAATAAATGTT+TGG | + | chr4.2:90111345-90111364 | MS.gene61153:intron | 35.0% |
| !! | GGTTCTGAAGAACATTTGAT+AGG | + | chr4.2:90113034-90113053 | MS.gene61153:intron | 35.0% |
| !!! | TGAGAGGTATTTTTGATGGA+GGG | + | chr4.2:90110978-90110997 | MS.gene61153:intron | 35.0% |
| AAGAATGTACTGTTGAGTGC+TGG | + | chr4.2:90112301-90112320 | MS.gene61153:intron | 40.0% | |
| AATGTGGATGCAGGTATGAT+TGG | + | chr4.2:90111324-90111343 | MS.gene61153:intron | 40.0% | |
| ACACTAGTAATGTGCTCATG+AGG | - | chr4.2:90111779-90111798 | None:intergenic | 40.0% | |
| ACCTCACATCAGATAAGAGA+TGG | + | chr4.2:90112447-90112466 | MS.gene61153:intron | 40.0% | |
| ACGTGTTTGAAAAACTGTGC+AGG | + | chr4.2:90111916-90111935 | MS.gene61153:intron | 40.0% | |
| ACTGTCAAATTGTTCACCCT+TGG | + | chr4.2:90112848-90112867 | MS.gene61153:intron | 40.0% | |
| AGCCTGAATGAGCTTTACTT+GGG | + | chr4.2:90111252-90111271 | MS.gene61153:CDS | 40.0% | |
| AGGATTGTTGAACTATCGGT+AGG | + | chr4.2:90112242-90112261 | MS.gene61153:intron | 40.0% | |
| AGTACCAATTGGTCCATATG+AGG | - | chr4.2:90109834-90109853 | None:intergenic | 40.0% | |
| ATCCGAGATTGATGTCAATG+TGG | + | chr4.2:90111308-90111327 | MS.gene61153:CDS | 40.0% | |
| ATTCAGAGAAGACCAGCAAA+TGG | - | chr4.2:90113181-90113200 | None:intergenic | 40.0% | |
| ATTGATGTCAATGTGGATGC+AGG | + | chr4.2:90111315-90111334 | MS.gene61153:CDS | 40.0% | |
| CAACGAAGCCTCTTAGATAA+AGG | - | chr4.2:90109741-90109760 | None:intergenic | 40.0% | |
| CAAGGTGGCAATTCAAAATC+AGG | + | chr4.2:90110797-90110816 | MS.gene61153:intron | 40.0% | |
| CAGATGCAATAACTGAGCAT+TGG | - | chr4.2:90113257-90113276 | None:intergenic | 40.0% | |
| CATACTCAACTGAGGATAAC+AGG | - | chr4.2:90112592-90112611 | None:intergenic | 40.0% | |
| CCATATGAGGGAAGAGATTA+CGG | - | chr4.2:90109821-90109840 | None:intergenic | 40.0% | |
| CCTTCTATCCCGTTAAAGAA+CGG | - | chr4.2:90112940-90112959 | None:intergenic | 40.0% | |
| CGAAACAATGGTCTCAGATT+TGG | + | chr4.2:90111429-90111448 | MS.gene61153:intron | 40.0% | |
| CGAGAAATCAATCAGTGAAC+GGG | + | chr4.2:90112104-90112123 | MS.gene61153:CDS | 40.0% | |
| CGTGTCAAGTGTCAATATCT+CGG | - | chr4.2:90111899-90111918 | None:intergenic | 40.0% | |
| CGTTCTTTAACGGGATAGAA+GGG | + | chr4.2:90112938-90112957 | MS.gene61153:intron | 40.0% | |
| CTCTTAGATAAAGGAGGAGA+AGG | - | chr4.2:90109732-90109751 | None:intergenic | 40.0% | |
| CTTCTCCTCCTTTATCTAAG+AGG | + | chr4.2:90109730-90109749 | MS.gene61153:CDS | 40.0% | |
| GAGAGAGATAGGTTACTAAG+AGG | - | chr4.2:90111556-90111575 | None:intergenic | 40.0% | |
| GCAGGTAAATTGGAGAATGA+TGG | + | chr4.2:90111934-90111953 | MS.gene61153:intron | 40.0% | |
| GTACCAATTGGTCCATATGA+GGG | - | chr4.2:90109833-90109852 | None:intergenic | 40.0% | |
| TAAAATGTGCATGTGTGTGG+GGG | - | chr4.2:90111701-90111720 | None:intergenic | 40.0% | |
| TCGTGTATTTCTCTCCCTTT+GGG | + | chr4.2:90113092-90113111 | MS.gene61153:intron | 40.0% | |
| TTAGATAAAGGAGGAGAAGG+AGG | - | chr4.2:90109729-90109748 | None:intergenic | 40.0% | |
| TTCTGCTTTGGTTGAAAACG+AGG | + | chr4.2:90113226-90113245 | MS.gene61153:intron | 40.0% | |
| TTGCCTATTCGCAACTTTCA+GGG | - | chr4.2:90110669-90110688 | None:intergenic | 40.0% | |
| TTGCTAATCAACGATGACGA+CGG | + | chr4.2:90110372-90110391 | MS.gene61153:intron | 40.0% | |
| TTTGCCTATTCGCAACTTTC+AGG | - | chr4.2:90110670-90110689 | None:intergenic | 40.0% | |
| ! | AACAGAGCAACGGATTTCAA+GGG | + | chr4.2:90113493-90113512 | MS.gene61153:CDS | 40.0% |
| ! | ACCTGATTTTGAATGGTGTC+GGG | + | chr4.2:90110694-90110713 | MS.gene61153:intron | 40.0% |
| ! | ACGACGGTGATGTATTTTTC+TGG | + | chr4.2:90110388-90110407 | MS.gene61153:intron | 40.0% |
| ! | ATTGCAGCATTTGAAGCAGT+TGG | + | chr4.2:90112761-90112780 | MS.gene61153:CDS | 40.0% |
| ! | CGACGGTGATGTATTTTTCT+GGG | + | chr4.2:90110389-90110408 | MS.gene61153:intron | 40.0% |
| ! | GACCTGATTTTGAATGGTGT+CGG | + | chr4.2:90110693-90110712 | MS.gene61153:intron | 40.0% |
| ! | GGATGTGTTTGTTGACCATT+TGG | + | chr4.2:90111374-90111393 | MS.gene61153:intron | 40.0% |
| ! | GGTCTCAGATTTGGTAGTAT+TGG | + | chr4.2:90111438-90111457 | MS.gene61153:intron | 40.0% |
| ! | GTTTTCAATCTTGTAGCTGG+AGG | + | chr4.2:90111485-90111504 | MS.gene61153:intron | 40.0% |
| ! | TCTGGGATAGACGAATTTGT+CGG | + | chr4.2:90110406-90110425 | MS.gene61153:intron | 40.0% |
| ! | TTTGGCAATGCATTTGAAGC+AGG | + | chr4.2:90113467-90113486 | MS.gene61153:CDS | 40.0% |
| !! | GCAAATCGAAGTGCTGATTA+AGG | + | chr4.2:90112665-90112684 | MS.gene61153:CDS | 40.0% |
| !!! | AGAGGTATTTTTGATGGAGG+GGG | + | chr4.2:90110980-90110999 | MS.gene61153:intron | 40.0% |
| !!! | AGGGTGAGAGGTATTTTTGA+TGG | + | chr4.2:90110974-90110993 | MS.gene61153:intron | 40.0% |
| !!! | GAGAGGTATTTTTGATGGAG+GGG | + | chr4.2:90110979-90110998 | MS.gene61153:intron | 40.0% |
| !!! | GTGAGAGGTATTTTTGATGG+AGG | + | chr4.2:90110977-90110996 | MS.gene61153:intron | 40.0% |
| AAAATAACTCCCAGCCCCAA+AGG | - | chr4.2:90113110-90113129 | None:intergenic | 45.0% | |
| AAATAACTCCCAGCCCCAAA+GGG | - | chr4.2:90113109-90113128 | None:intergenic | 45.0% | |
| AAGATAATACCGTGGGGAGA+GGG | + | chr4.2:90112397-90112416 | MS.gene61153:intron | 45.0% | |
| AATCAATCAGTGAACGGGCA+AGG | + | chr4.2:90112109-90112128 | MS.gene61153:CDS | 45.0% | |
| AATTCGTCCCCTGAAGTTGT+AGG | - | chr4.2:90110867-90110886 | None:intergenic | 45.0% | |
| ACAACTTCAGGGGACGAATT+GGG | + | chr4.2:90110867-90110886 | MS.gene61153:intron | 45.0% | |
| ACATTCACTTGTGACCTGCT+AGG | - | chr4.2:90112207-90112226 | None:intergenic | 45.0% | |
| ACGAATCGGAGAAGTAGAAG+AGG | - | chr4.2:90109766-90109785 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAT+AGG | - | chr4.2:90111567-90111586 | None:intergenic | 45.0% | |
| AGTGGGAAGTTTCCATTTGC+TGG | + | chr4.2:90113166-90113185 | MS.gene61153:intron | 45.0% | |
| ATCAATCAGTGAACGGGCAA+GGG | + | chr4.2:90112110-90112129 | MS.gene61153:CDS | 45.0% | |
| CCGTAATCTCTTCCCTCATA+TGG | + | chr4.2:90109818-90109837 | MS.gene61153:CDS | 45.0% | |
| CCGTTCTTTAACGGGATAGA+AGG | + | chr4.2:90112937-90112956 | MS.gene61153:intron | 45.0% | |
| CGAAGCCTCTTAGATAAAGG+AGG | - | chr4.2:90109738-90109757 | None:intergenic | 45.0% | |
| CGTGTATTTCTCTCCCTTTG+GGG | + | chr4.2:90113093-90113112 | MS.gene61153:intron | 45.0% | |
| CTCCCAAGTAAAGCTCATTC+AGG | - | chr4.2:90111257-90111276 | None:intergenic | 45.0% | |
| CTCTTATCTGATGTGAGGTG+AGG | - | chr4.2:90112446-90112465 | None:intergenic | 45.0% | |
| CTTCCCTCATATGGACCAAT+TGG | + | chr4.2:90109827-90109846 | MS.gene61153:CDS | 45.0% | |
| CTTTGGTTGAAAACGAGGAG+AGG | + | chr4.2:90113231-90113250 | MS.gene61153:intron | 45.0% | |
| GAGCCTGAATGAGCTTTACT+TGG | + | chr4.2:90111251-90111270 | MS.gene61153:CDS | 45.0% | |
| GATGCAGGTATGATTGGTGT+TGG | + | chr4.2:90111330-90111349 | MS.gene61153:intron | 45.0% | |
| GCCATCTCTTATCTGATGTG+AGG | - | chr4.2:90112451-90112470 | None:intergenic | 45.0% | |
| GTCGTGTATTTCTCTCCCTT+TGG | + | chr4.2:90113091-90113110 | MS.gene61153:intron | 45.0% | |
| TACAACTTCAGGGGACGAAT+TGG | + | chr4.2:90110866-90110885 | MS.gene61153:intron | 45.0% | |
| TGCCTATTCGCAACTTTCAG+GGG | - | chr4.2:90110668-90110687 | None:intergenic | 45.0% | |
| ! | CAACAGAGCAACGGATTTCA+AGG | + | chr4.2:90113492-90113511 | MS.gene61153:CDS | 45.0% |
| ! | CTGAATCTCCTTCCTTTTGC+CGG | + | chr4.2:90113195-90113214 | MS.gene61153:intron | 45.0% |
| ! | GCAACTTTCAGGGGTGTAAA+TGG | - | chr4.2:90110659-90110678 | None:intergenic | 45.0% |
| ! | TGAATCTCCTTCCTTTTGCC+GGG | + | chr4.2:90113196-90113215 | MS.gene61153:intron | 45.0% |
| ! | TTGAATGGTGTCGGGCAATT+TGG | + | chr4.2:90110702-90110721 | MS.gene61153:intron | 45.0% |
| !! | CACTCTGAAATTGTAGGCGT+CGG | + | chr4.2:90110633-90110652 | MS.gene61153:intron | 45.0% |
| !! | CCTCACAAGCCAGTTTTGTA+AGG | + | chr4.2:90112505-90112524 | MS.gene61153:intron | 45.0% |
| !! | CCTTACAAAACTGGCTTGTG+AGG | - | chr4.2:90112508-90112527 | None:intergenic | 45.0% |
| !! | GTTGAGTGCTGGTTTAGTTG+AGG | + | chr4.2:90112312-90112331 | MS.gene61153:intron | 45.0% |
| !! | TTTGGGGCTGGGAGTTATTT+TGG | + | chr4.2:90113109-90113128 | MS.gene61153:intron | 45.0% |
| !!! | TTTTACATATAAAATAAATT+TGG | + | chr4.2:90113289-90113308 | MS.gene61153:intron | 5.0% |
| AAGCAGGCTCAACAGAGCAA+CGG | + | chr4.2:90113483-90113502 | MS.gene61153:CDS | 50.0% | |
| AATCAGAAAGACGCTCGTGC+TGG | - | chr4.2:90112722-90112741 | None:intergenic | 50.0% | |
| AGAATTGAGTGCCCGGCAAA+AGG | - | chr4.2:90113210-90113229 | None:intergenic | 50.0% | |
| CAACTTCAGGGGACGAATTG+GGG | + | chr4.2:90110868-90110887 | MS.gene61153:intron | 50.0% | |
| CACCCCTGAAAGTTGCGAAT+AGG | + | chr4.2:90110663-90110682 | MS.gene61153:intron | 50.0% | |
| CCAAAGCAGAATTGAGTGCC+CGG | - | chr4.2:90113217-90113236 | None:intergenic | 50.0% | |
| CGGAGCTGATCAAAGAGAGA+AGG | - | chr4.2:90109801-90109820 | None:intergenic | 50.0% | |
| GAAGATAATACCGTGGGGAG+AGG | + | chr4.2:90112396-90112415 | MS.gene61153:intron | 50.0% | |
| GCCCGACACCATTCAAAATC+AGG | - | chr4.2:90110698-90110717 | None:intergenic | 50.0% | |
| GGACAAGGGCTGTGAAGTAT+AGG | + | chr4.2:90111817-90111836 | MS.gene61153:intron | 50.0% | |
| GGAGCAGATCAGAACTCTTG+AGG | + | chr4.2:90112797-90112816 | MS.gene61153:CDS | 50.0% | |
| TATGAAGGGAAGAGGGTGAG+AGG | + | chr4.2:90110962-90110981 | MS.gene61153:intron | 50.0% | |
| TTGAACAGCCTTCCTGCAGA+TGG | + | chr4.2:90111988-90112007 | MS.gene61153:CDS | 50.0% | |
| TTTACTTGGGAGCTGCAGGT+GGG | + | chr4.2:90111265-90111284 | MS.gene61153:CDS | 50.0% | |
| ! | CAAGAGTTCTGATCTGCTCC+TGG | - | chr4.2:90112797-90112816 | None:intergenic | 50.0% |
| ! | GGCTCTAGCATCATCAACAC+TGG | - | chr4.2:90112058-90112077 | None:intergenic | 50.0% |
| ! | TTTTGATGGAGGGGGTGAGT+AGG | + | chr4.2:90110988-90111007 | MS.gene61153:intron | 50.0% |
| !! | ATTTCTCTCCCTTTGGGGCT+GGG | + | chr4.2:90113098-90113117 | MS.gene61153:intron | 50.0% |
| !! | CAAAACTGGCTTGTGAGGTG+AGG | - | chr4.2:90112503-90112522 | None:intergenic | 50.0% |
| !! | TATTTCTCTCCCTTTGGGGC+TGG | + | chr4.2:90113097-90113116 | MS.gene61153:intron | 50.0% |
| ATAATACCGTGGGGAGAGGG+TGG | + | chr4.2:90112400-90112419 | MS.gene61153:intron | 55.0% | |
| ATCCATTCGGCTCCATCTGC+AGG | - | chr4.2:90112003-90112022 | None:intergenic | 55.0% | |
| ATTCGGCTCCATCTGCAGGA+AGG | - | chr4.2:90111999-90112018 | None:intergenic | 55.0% | |
| CCGGGCACTCAATTCTGCTT+TGG | + | chr4.2:90113214-90113233 | MS.gene61153:intron | 55.0% | |
| CCTCCAGCATTCTAGCAGCA+CGG | - | chr4.2:90112080-90112099 | None:intergenic | 55.0% | |
| CTCCAGCATTCTAGCAGCAC+GGG | - | chr4.2:90112079-90112098 | None:intergenic | 55.0% | |
| CTTTACTTGGGAGCTGCAGG+TGG | + | chr4.2:90111264-90111283 | MS.gene61153:CDS | 55.0% | |
| GAGCTTTACTTGGGAGCTGC+AGG | + | chr4.2:90111261-90111280 | MS.gene61153:CDS | 55.0% | |
| GCAGTTGGCGTCTCAATACC+AGG | + | chr4.2:90112776-90112795 | MS.gene61153:CDS | 55.0% | |
| GGCGACAGATGCTCTTCAGA+AGG | + | chr4.2:90112137-90112156 | MS.gene61153:CDS | 55.0% | |
| TCCCCTGAAGTTGTAGGCGT+CGG | - | chr4.2:90110861-90110880 | None:intergenic | 55.0% | |
| TTCCTGCAGATGGAGCCGAA+TGG | + | chr4.2:90111998-90112017 | MS.gene61153:CDS | 55.0% | |
| TTGAGTGCCCGGCAAAAGGA+AGG | - | chr4.2:90113206-90113225 | None:intergenic | 55.0% | |
| CCCCTGAAGTTGTAGGCGTC+GGG | - | chr4.2:90110860-90110879 | None:intergenic | 60.0% | |
| CCCGACGCCTACAACTTCAG+GGG | + | chr4.2:90110857-90110876 | MS.gene61153:intron | 60.0% | |
| GCCCGACGCCTACAACTTCA+GGG | + | chr4.2:90110856-90110875 | MS.gene61153:intron | 60.0% | |
| GGAGCTGCAGGTGGGAATTC+TGG | + | chr4.2:90111273-90111292 | MS.gene61153:CDS | 60.0% | |
| TGCCCGACGCCTACAACTTC+AGG | + | chr4.2:90110855-90110874 | MS.gene61153:intron | 60.0% | |
| TGGGGGTGAGAGAGAGTCGA+TGG | - | chr4.2:90111684-90111703 | None:intergenic | 60.0% | |
| TTTGCTCCACCCTCTCCCCA+CGG | - | chr4.2:90112409-90112428 | None:intergenic | 60.0% | |
| ! | AGCCCGTGCTGCTAGAATGC+TGG | + | chr4.2:90112074-90112093 | MS.gene61153:CDS | 60.0% |
| ! | CCGTGCTGCTAGAATGCTGG+AGG | + | chr4.2:90112077-90112096 | MS.gene61153:CDS | 60.0% |
| CAGTGAACGGGCAAGGGCTG+AGG | + | chr4.2:90112116-90112135 | MS.gene61153:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 90109675 | 90113539 | 90109675 | ID=MS.gene61153 |
| chr4.2 | mRNA | 90109675 | 90113539 | 90109675 | ID=MS.gene61153.t1;Parent=MS.gene61153 |
| chr4.2 | exon | 90109675 | 90109848 | 90109675 | ID=MS.gene61153.t1.exon1;Parent=MS.gene61153.t1 |
| chr4.2 | CDS | 90109675 | 90109848 | 90109675 | ID=cds.MS.gene61153.t1;Parent=MS.gene61153.t1 |
| chr4.2 | exon | 90111198 | 90111336 | 90111198 | ID=MS.gene61153.t1.exon2;Parent=MS.gene61153.t1 |
| chr4.2 | CDS | 90111198 | 90111336 | 90111198 | ID=cds.MS.gene61153.t1;Parent=MS.gene61153.t1 |
| chr4.2 | exon | 90111938 | 90112158 | 90111938 | ID=MS.gene61153.t1.exon3;Parent=MS.gene61153.t1 |
| chr4.2 | CDS | 90111938 | 90112158 | 90111938 | ID=cds.MS.gene61153.t1;Parent=MS.gene61153.t1 |
| chr4.2 | exon | 90112645 | 90112818 | 90112645 | ID=MS.gene61153.t1.exon4;Parent=MS.gene61153.t1 |
| chr4.2 | CDS | 90112645 | 90112818 | 90112645 | ID=cds.MS.gene61153.t1;Parent=MS.gene61153.t1 |
| chr4.2 | exon | 90113453 | 90113539 | 90113453 | ID=MS.gene61153.t1.exon5;Parent=MS.gene61153.t1 |
| chr4.2 | CDS | 90113453 | 90113539 | 90113453 | ID=cds.MS.gene61153.t1;Parent=MS.gene61153.t1 |
| Gene Sequence |
| Protein sequence |
