Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62058.t1 | XP_013458738.1 | 97 | 166 | 5 | 0 | 1 | 166 | 128 | 293 | 3.50E-79 | 304.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62058.t1 | Q4LDF9 | 82.5 | 166 | 26 | 1 | 1 | 166 | 124 | 286 | 1.7e-74 | 280.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62058.t1 | A0A072V3P1 | 97.0 | 166 | 5 | 0 | 1 | 166 | 128 | 293 | 2.5e-79 | 304.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene62058 | 0.800821 | 1.20E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene62058 | 0.815537 | 8.79E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene62058 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene049627 | MS.gene62058 | 0.851327 | 9.54E-61 | -1.69E-46 |
| MS.gene049865 | MS.gene62058 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene62058 | 0.821954 | 3.07E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene62058 | 0.832947 | 7.07E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene62058 | 0.831275 | 1.83E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene62058 | 0.830729 | 2.49E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene62058 | 0.838936 | 2.14E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene62058 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene62058 | 0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene62058 | 0.844659 | 6.59E-59 | -1.69E-46 |
| MS.gene05087 | MS.gene62058 | 0.888242 | 7.02E-73 | -1.69E-46 |
| MS.gene050904 | MS.gene62058 | 0.84523 | 4.62E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene62058 | 0.834108 | 3.63E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene62058 | 0.831288 | 1.82E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene62058 | 0.819333 | 1.23E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene62058 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene054638 | MS.gene62058 | 0.858659 | 7.08E-63 | -1.69E-46 |
| MS.gene05470 | MS.gene62058 | 0.827679 | 1.37E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene62058 | 0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene62058 | 0.810377 | 1.19E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene62058 | 0.805666 | 1.20E-49 | -1.69E-46 |
| MS.gene055849 | MS.gene62058 | 0.810355 | 1.20E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene62058 | 0.821524 | 3.86E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene62058 | 0.808578 | 2.89E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene62058 | 0.804377 | 2.22E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene62058 | 0.807617 | 4.63E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene62058 | 0.847575 | 1.06E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene62058 | 0.809822 | 1.56E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene62058 | 0.841719 | 4.01E-58 | -1.69E-46 |
| MS.gene058719 | MS.gene62058 | 0.86665 | 2.44E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene62058 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene62058 | 0.82438 | 8.33E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene62058 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene059026 | MS.gene62058 | 0.824461 | 7.97E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene62058 | 0.805641 | 1.21E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene62058 | 0.825923 | 3.60E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene62058 | 0.838687 | 2.48E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene62058 | 0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene62058 | 0.823524 | 1.32E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene62058 | 0.854035 | 1.61E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene62058 | 0.816349 | 5.79E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene62058 | 0.804134 | 2.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62058.t1 | MTR_4g134950 | 98.193 | 166 | 3 | 0 | 1 | 166 | 128 | 293 | 7.44e-120 | 342 |
| MS.gene62058.t1 | MTR_4g134950 | 98.400 | 125 | 2 | 0 | 1 | 125 | 128 | 252 | 4.98e-86 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62058.t1 | AT2G43950 | 68.072 | 166 | 48 | 2 | 1 | 166 | 140 | 300 | 3.83e-73 | 223 |
| MS.gene62058.t1 | AT2G43950 | 68.072 | 166 | 48 | 2 | 1 | 166 | 140 | 300 | 4.03e-73 | 223 |
Find 0 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGATAAAATGATAAAAAT+TGG | + | 32155:10071-10090 | MS.gene62058:intergenic | 10.0% |
| !! | TAGATAAAATGATAAAAATT+GGG | + | 32155:10070-10089 | MS.gene62058:intergenic | 10.0% |
| !!! | TTTGTTTATTTTAAATTACA+AGG | + | 32155:11165-11184 | MS.gene62058:intergenic | 10.0% |
| !! | AAATCTTAGAAAATGAAAAT+GGG | - | 32155:10913-10932 | MS.gene62058:intron | 15.0% |
| !! | AAATTAATGTTTCATGTAAA+AGG | + | 32155:11301-11320 | MS.gene62058:intergenic | 15.0% |
| !! | CACAACAAATAAAAAAATTA+GGG | + | 32155:11232-11251 | MS.gene62058:intergenic | 15.0% |
| !! | TAAATCTTAGAAAATGAAAA+TGG | - | 32155:10912-10931 | MS.gene62058:intron | 15.0% |
| !! | TCAAATATCATAAAAGAAAA+TGG | + | 32155:11019-11038 | MS.gene62058:intergenic | 15.0% |
| !! | TCACAACAAATAAAAAAATT+AGG | + | 32155:11233-11252 | MS.gene62058:intergenic | 15.0% |
| !!! | TAAATTTTTCAAATAAATGC+AGG | - | 32155:10164-10183 | MS.gene62058:intron | 15.0% |
| !! | AAATAAATGAATGATAGTAG+AGG | + | 32155:9825-9844 | MS.gene62058:intergenic | 20.0% |
| !! | AAATGATTTCACAAAGTAAA+TGG | + | 32155:10659-10678 | MS.gene62058:intergenic | 20.0% |
| !! | AATAGGAAAAAATTCTTAAG+AGG | + | 32155:10301-10320 | MS.gene62058:intergenic | 20.0% |
| !! | AATGATTTCACAAAGTAAAT+GGG | + | 32155:10658-10677 | MS.gene62058:intergenic | 20.0% |
| !! | ATAGGAAAAAATTCTTAAGA+GGG | + | 32155:10300-10319 | MS.gene62058:intergenic | 20.0% |
| !!! | ATTGTTAGCATTTTCTTTTT+TGG | - | 32155:11506-11525 | MS.gene62058:intron | 20.0% |
| !!! | GTTAAAATTGTTTTATCAAG+TGG | - | 32155:10357-10376 | MS.gene62058:intron | 20.0% |
| !!! | TATTTTAAATTACAAGGAGA+TGG | + | 32155:11159-11178 | MS.gene62058:intergenic | 20.0% |
| !!! | TCTTTCTTATTTATCTCATA+GGG | + | 32155:10609-10628 | MS.gene62058:intergenic | 20.0% |
| !!! | TTCTTTCTTATTTATCTCAT+AGG | + | 32155:10610-10629 | MS.gene62058:intergenic | 20.0% |
| !!! | TTTTAAAAGCCATATTAGTA+AGG | + | 32155:11739-11758 | MS.gene62058:intergenic | 20.0% |
| ! | AAGAAAGAAAATGAAGAGAA+CGG | - | 32155:10621-10640 | MS.gene62058:intron | 25.0% |
| ! | AAGGTAATAAATTGAAGAGA+TGG | + | 32155:10102-10121 | MS.gene62058:intergenic | 25.0% |
| ! | ATCATAAAAGAAAATGGTGA+AGG | + | 32155:11013-11032 | MS.gene62058:intergenic | 25.0% |
| ! | ATGATTTCACAAAGTAAATG+GGG | + | 32155:10657-10676 | MS.gene62058:intergenic | 25.0% |
| ! | CAATTGTAATAGAGAGAATA+TGG | + | 32155:11120-11139 | MS.gene62058:intergenic | 25.0% |
| ! | CACATATTATTGCAAGTAAT+AGG | + | 32155:10318-10337 | MS.gene62058:intergenic | 25.0% |
| ! | GAATTTCTTGAAATACAATC+TGG | - | 32155:10455-10474 | MS.gene62058:intron | 25.0% |
| ! | GTTATGAAGAATGTAAGTTT+AGG | + | 32155:11090-11109 | MS.gene62058:intergenic | 25.0% |
| ! | TTCATCAACTACTTTACATT+TGG | - | 32155:11334-11353 | MS.gene62058:CDS | 25.0% |
| ! | TTTAACATAACATTTCTCGA+TGG | + | 32155:10343-10362 | MS.gene62058:intergenic | 25.0% |
| !! | AAATTTGAAATCTTCACCAT+AGG | + | 32155:11826-11845 | MS.gene62058:intergenic | 25.0% |
| !! | AAATTTTCAGAACCTTTTAG+TGG | - | 32155:11043-11062 | MS.gene62058:intron | 25.0% |
| !! | ATTCTAAGGAGATTATATTG+AGG | + | 32155:11270-11289 | MS.gene62058:intergenic | 25.0% |
| !! | ATTTAAAGCTGGTTATGATT+CGG | - | 32155:11842-11861 | MS.gene62058:CDS | 25.0% |
| !! | CTTAAAGGTCAATTTTTGAA+TGG | - | 32155:9970-9989 | MS.gene62058:intron | 25.0% |
| !! | GAAGATTTCAAATTTAAAGC+TGG | - | 32155:11831-11850 | MS.gene62058:CDS | 25.0% |
| !! | TTCTAAGGAGATTATATTGA+GGG | + | 32155:11269-11288 | MS.gene62058:intergenic | 25.0% |
| !!! | AAAATTGTTTTATCAAGTGG+TGG | - | 32155:10360-10379 | MS.gene62058:intron | 25.0% |
| !!! | ACAATCAATTACTTTTAGGT+TGG | + | 32155:11491-11510 | MS.gene62058:intergenic | 25.0% |
| !!! | ATGGCTTTTAAAATGCTTTA+TGG | - | 32155:11746-11765 | MS.gene62058:intron | 25.0% |
| !!! | CTCAGTTTAACTTGATAATA+CGG | - | 32155:10706-10725 | MS.gene62058:intron | 25.0% |
| !!! | GCTAACAATCAATTACTTTT+AGG | + | 32155:11495-11514 | MS.gene62058:intergenic | 25.0% |
| !!! | GTTAATTTTACTTGCTAACA+AGG | + | 32155:10891-10910 | MS.gene62058:intergenic | 25.0% |
| !!! | TATCAAAGGAGCATTTAATT+GGG | + | 32155:11451-11470 | MS.gene62058:intergenic | 25.0% |
| !!! | TCAGTTTAACTTGATAATAC+GGG | - | 32155:10707-10726 | MS.gene62058:intron | 25.0% |
| AAAATACCTTGTTCTCTTGT+CGG | + | 32155:11606-11625 | MS.gene62058:intergenic | 30.0% | |
| AAATTTGTGTAGAGTAGCTT+TGG | + | 32155:10541-10560 | MS.gene62058:intergenic | 30.0% | |
| AAGTGGAAACACCAAAATAA+GGG | + | 32155:11650-11669 | MS.gene62058:intergenic | 30.0% | |
| AATGCTTTATGGATAGTTAC+TGG | - | 32155:11757-11776 | MS.gene62058:intron | 30.0% | |
| AGACGAGCTTATTATTCTAA+GGG | + | 32155:11716-11735 | MS.gene62058:intergenic | 30.0% | |
| ATAGAGAGAATATGGAAGAA+AGG | + | 32155:11112-11131 | MS.gene62058:intergenic | 30.0% | |
| ATGTTTCATGTAAAAGGAGT+CGG | + | 32155:11295-11314 | MS.gene62058:intergenic | 30.0% | |
| ATTTGGCACTCATATAAGAT+TGG | - | 32155:10138-10157 | MS.gene62058:intron | 30.0% | |
| CAAAACAAAGAAATGTAGCA+AGG | + | 32155:10574-10593 | MS.gene62058:intergenic | 30.0% | |
| CAAATGACAAATCATTTGAC+GGG | + | 32155:10224-10243 | MS.gene62058:intergenic | 30.0% | |
| GCAAATGACAAATCATTTGA+CGG | + | 32155:10225-10244 | MS.gene62058:intergenic | 30.0% | |
| TAAGTGGAAACACCAAAATA+AGG | + | 32155:11651-11670 | MS.gene62058:intergenic | 30.0% | |
| TGTAGTTGATTACTATGTGT+TGG | + | 32155:11361-11380 | MS.gene62058:intergenic | 30.0% | |
| ! | AAATACCTATAGAGCATCTT+TGG | + | 32155:11683-11702 | MS.gene62058:intergenic | 30.0% |
| !! | ATCAAAGGAGCATTTAATTG+GGG | + | 32155:11450-11469 | MS.gene62058:intergenic | 30.0% |
| !! | CAGTTTAACTTGATAATACG+GGG | - | 32155:10708-10727 | MS.gene62058:intron | 30.0% |
| !! | CTATCAAAGGAGCATTTAAT+TGG | + | 32155:11452-11471 | MS.gene62058:intergenic | 30.0% |
| !!! | AGCATTTTCTTTTTTGGCTA+TGG | - | 32155:11512-11531 | MS.gene62058:intron | 30.0% |
| !!! | GAACAATTGTCTGCATTTTT+TGG | + | 32155:10848-10867 | MS.gene62058:intergenic | 30.0% |
| !!! | TGAGCACGTATTTTTAGAAA+AGG | + | 32155:10690-10709 | MS.gene62058:intergenic | 30.0% |
| AAAAATTCCTTGTCTGTCAG+TGG | - | 32155:9943-9962 | MS.gene62058:intron | 35.0% | |
| AAAAGAACATACCAATCCAG+CGG | + | 32155:9784-9803 | MS.gene62058:intergenic | 35.0% | |
| AAAAGGAGTCGGTAATTCTA+AGG | + | 32155:11284-11303 | MS.gene62058:intergenic | 35.0% | |
| AAAATTCCTTGTCTGTCAGT+GGG | - | 32155:9944-9963 | MS.gene62058:intron | 35.0% | |
| AAGAAAGAAAATACAGCCTC+AGG | - | 32155:10484-10503 | MS.gene62058:intron | 35.0% | |
| AATAACTACTCAAGCAGCTA+AGG | + | 32155:10121-10140 | MS.gene62058:intergenic | 35.0% | |
| ACAATTGCGATTCGAACTAT+TGG | - | 32155:11781-11800 | MS.gene62058:intron | 35.0% | |
| AGAGTGAAGACACATATTGA+TGG | - | 32155:11571-11590 | MS.gene62058:CDS | 35.0% | |
| AGCAGTAATATACCTTGTAG+CGG | + | 32155:10041-10060 | MS.gene62058:intergenic | 35.0% | |
| AGTTTCGTTACAAGAGAAAG+AGG | - | 32155:9888-9907 | MS.gene62058:intron | 35.0% | |
| ATGAAGAGAACGGAAAATTG+AGG | - | 32155:10631-10650 | MS.gene62058:intron | 35.0% | |
| CAATTCATCATCCTTGTAGT+GGG | + | 32155:10007-10026 | MS.gene62058:intergenic | 35.0% | |
| CAGTAAGTGTATGCTATCAA+AGG | + | 32155:11465-11484 | MS.gene62058:intergenic | 35.0% | |
| CATCTTCTCTTCATCACAAT+GGG | + | 32155:10758-10777 | MS.gene62058:intergenic | 35.0% | |
| GAGACGAGCTTATTATTCTA+AGG | + | 32155:11717-11736 | MS.gene62058:intergenic | 35.0% | |
| GAGTGAAGACACATATTGAT+GGG | - | 32155:11572-11591 | MS.gene62058:CDS | 35.0% | |
| TAGATTATGCAGTAACCAGT+TGG | + | 32155:11393-11412 | MS.gene62058:intergenic | 35.0% | |
| TAGCTGCTTGAGTAGTTATT+TGG | - | 32155:10121-10140 | MS.gene62058:intron | 35.0% | |
| TCAATTCATCATCCTTGTAG+TGG | + | 32155:10008-10027 | MS.gene62058:intergenic | 35.0% | |
| TCATCTTCTCTTCATCACAA+TGG | + | 32155:10759-10778 | MS.gene62058:intergenic | 35.0% | |
| TCCAATGAAGAGACAAACAA+AGG | + | 32155:11552-11571 | MS.gene62058:intergenic | 35.0% | |
| ! | TCCTTTGTTTGTCTCTTCAT+TGG | - | 32155:11548-11567 | MS.gene62058:CDS | 35.0% |
| ! | TTGGTCTTTCTGACAAGTTA+AGG | - | 32155:10259-10278 | MS.gene62058:intron | 35.0% |
| !! | AAGACACATATTGATGGGTT+AGG | - | 32155:11577-11596 | MS.gene62058:CDS | 35.0% |
| !! | ACTCATTTGAGCCCTTATTT+TGG | - | 32155:11636-11655 | MS.gene62058:CDS | 35.0% |
| !! | AGACACATATTGATGGGTTA+GGG | - | 32155:11578-11597 | MS.gene62058:CDS | 35.0% |
| !! | GACAAGAGAACAAGGTATTT+TGG | - | 32155:11605-11624 | MS.gene62058:CDS | 35.0% |
| !! | GGAAATCTGAAAGTTGCTTT+TGG | + | 32155:9859-9878 | MS.gene62058:intergenic | 35.0% |
| !!! | CTTTTTTGGCTATGGTTTGT+GGG | - | 32155:11520-11539 | MS.gene62058:intron | 35.0% |
| !!! | TCTTTTTTGGCTATGGTTTG+TGG | - | 32155:11519-11538 | MS.gene62058:intron | 35.0% |
| AAAATACAGCCTCAGGAAGT+AGG | - | 32155:10491-10510 | MS.gene62058:intron | 40.0% | |
| AGCTCGTCTCCTTACTAATA+TGG | - | 32155:11727-11746 | MS.gene62058:intron | 40.0% | |
| ATTTGACGGGAGAGAAAGTA+TGG | + | 32155:10211-10230 | MS.gene62058:intergenic | 40.0% | |
| GAAGTTAAGATACCGCTACA+AGG | - | 32155:10026-10045 | MS.gene62058:intron | 40.0% | |
| GCAACTTTCAGATTTCCTCT+AGG | - | 32155:9862-9881 | MS.gene62058:intron | 40.0% | |
| TCAACAAGGAGAGGTTACAA+TGG | - | 32155:9704-9723 | MS.gene62058:CDS | 40.0% | |
| TCTGTCAGTGGGATTCTTAA+AGG | - | 32155:9955-9974 | MS.gene62058:intron | 40.0% | |
| TCTTTGGCCAAAAAGGTAAG+TGG | + | 32155:11667-11686 | MS.gene62058:intergenic | 40.0% | |
| TGATAGTTGAAGTGCATAGC+CGG | + | 32155:9748-9767 | MS.gene62058:intergenic | 40.0% | |
| TGTAACGAAACTTCACCTAG+AGG | + | 32155:9880-9899 | MS.gene62058:intergenic | 40.0% | |
| TTCGTTACAAGAGAAAGAGG+AGG | - | 32155:9891-9910 | MS.gene62058:intron | 40.0% | |
| TTTGGCCAAAGATGCTCTAT+AGG | - | 32155:11675-11694 | MS.gene62058:CDS | 40.0% | |
| ! | AACAGTGTTGTGCCACTAAA+AGG | + | 32155:11058-11077 | MS.gene62058:intergenic | 40.0% |
| ! | AACTTGATAATACGGGGATG+TGG | - | 32155:10714-10733 | MS.gene62058:intron | 40.0% |
| ! | ACTTGATAATACGGGGATGT+GGG | - | 32155:10715-10734 | MS.gene62058:intron | 40.0% |
| ! | GGTGTTTCCACTTACCTTTT+TGG | - | 32155:11657-11676 | MS.gene62058:CDS | 40.0% |
| ! | TAAAGCTGGTTATGATTCGG+AGG | - | 32155:11845-11864 | MS.gene62058:CDS | 40.0% |
| ! | TAGAGCATCTTTGGCCAAAA+AGG | + | 32155:11674-11693 | MS.gene62058:intergenic | 40.0% |
| ! | TTTGACGGGAGAGAAAGTAT+GGG | + | 32155:10210-10229 | MS.gene62058:intergenic | 40.0% |
| !! | TGTGTAGAGTAGCTTTGGAT+GGG | + | 32155:10536-10555 | MS.gene62058:intergenic | 40.0% |
| !! | TTGTGTAGAGTAGCTTTGGA+TGG | + | 32155:10537-10556 | MS.gene62058:intergenic | 40.0% |
| AAGAATCCCACTGACAGACA+AGG | + | 32155:9953-9972 | MS.gene62058:intergenic | 45.0% | |
| AAGACCAAACCTACGCTTGA+AGG | + | 32155:10247-10266 | MS.gene62058:intergenic | 45.0% | |
| ACTACAATGCAAGCACCAAC+TGG | - | 32155:11375-11394 | MS.gene62058:CDS | 45.0% | |
| AGGGCTCAAATGAGTGTCTT+AGG | + | 32155:11631-11650 | MS.gene62058:intergenic | 45.0% | |
| ATAGTTGAAGTGCATAGCCG+GGG | + | 32155:9746-9765 | MS.gene62058:intergenic | 45.0% | |
| GATAGTTGAAGTGCATAGCC+GGG | + | 32155:9747-9766 | MS.gene62058:intergenic | 45.0% | |
| GCTGTCTACAAGCATACCTA+TGG | - | 32155:11807-11826 | MS.gene62058:CDS | 45.0% | |
| TTGTTCCTACCTACTTCCTG+AGG | + | 32155:10503-10522 | MS.gene62058:intergenic | 45.0% | |
| TTTGCCTTCAAGCGTAGGTT+TGG | - | 32155:10240-10259 | MS.gene62058:intron | 45.0% | |
| ! | CTTGATAATACGGGGATGTG+GGG | - | 32155:10716-10735 | MS.gene62058:intron | 45.0% |
| ! | TGTCATTTGCCTTCAAGCGT+AGG | - | 32155:10235-10254 | MS.gene62058:intron | 45.0% |
| GAACATACCAATCCAGCGGA+TGG | + | 32155:9780-9799 | MS.gene62058:intergenic | 50.0% | |
| GTTGCTAATATCGCTGACCC+CGG | - | 32155:9726-9745 | MS.gene62058:CDS | 50.0% | |
| TACAGCCTCAGGAAGTAGGT+AGG | - | 32155:10495-10514 | MS.gene62058:intron | 50.0% | |
| ! | TATGATTCGGAGGTTCGCCT+TGG | - | 32155:11855-11874 | MS.gene62058:CDS | 50.0% |
| ACCAATCCAGCGGATGGAAG+TGG | + | 32155:9774-9793 | MS.gene62058:intergenic | 55.0% | |
| AGAGAAAGAGGAGGAGCAGC+AGG | - | 32155:9900-9919 | MS.gene62058:intron | 55.0% | |
| TGTCTGCACTGCCCACTACA+AGG | - | 32155:9993-10012 | MS.gene62058:intron | 55.0% | |
| !! | AGGGCACCGACAAGAGAACA+AGG | - | 32155:11597-11616 | MS.gene62058:CDS | 55.0% |
| ATTCGGAGGTTCGCCTTGGC+TGG | - | 32155:11859-11878 | MS.gene62058:CDS | 60.0% | |
| CCTTGGCTGGGCATCCCTTT+GGG | - | 32155:11872-11891 | MS.gene62058:CDS | 60.0% | |
| GAAAGAGGAGGAGCAGCAGG+AGG | - | 32155:9903-9922 | MS.gene62058:intron | 60.0% | |
| GCCACTTCCATCCGCTGGAT+TGG | - | 32155:9770-9789 | MS.gene62058:CDS | 60.0% | |
| TCAACGCCACTTCCATCCGC+TGG | - | 32155:9765-9784 | MS.gene62058:CDS | 60.0% | |
| TTCGGAGGTTCGCCTTGGCT+GGG | - | 32155:11860-11879 | MS.gene62058:CDS | 60.0% | |
| AGAGGAGGAGCAGCAGGAGG+AGG | - | 32155:9906-9925 | MS.gene62058:intron | 65.0% | |
| GCCTTGGCTGGGCATCCCTT+TGG | - | 32155:11871-11890 | MS.gene62058:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32155 | gene | 9702 | 11893 | 9702 | ID=MS.gene62058 |
| 32155 | mRNA | 9702 | 11893 | 9702 | ID=MS.gene62058.t1;Parent=MS.gene62058 |
| 32155 | exon | 11804 | 11893 | 11804 | ID=MS.gene62058.t1.exon1;Parent=MS.gene62058.t1 |
| 32155 | CDS | 11804 | 11893 | 11804 | ID=cds.MS.gene62058.t1;Parent=MS.gene62058.t1 |
| 32155 | exon | 11548 | 11739 | 11548 | ID=MS.gene62058.t1.exon2;Parent=MS.gene62058.t1 |
| 32155 | CDS | 11548 | 11739 | 11548 | ID=cds.MS.gene62058.t1;Parent=MS.gene62058.t1 |
| 32155 | exon | 11315 | 11409 | 11315 | ID=MS.gene62058.t1.exon3;Parent=MS.gene62058.t1 |
| 32155 | CDS | 11315 | 11409 | 11315 | ID=cds.MS.gene62058.t1;Parent=MS.gene62058.t1 |
| 32155 | exon | 9702 | 9822 | 9702 | ID=MS.gene62058.t1.exon4;Parent=MS.gene62058.t1 |
| 32155 | CDS | 9702 | 9822 | 9702 | ID=cds.MS.gene62058.t1;Parent=MS.gene62058.t1 |
| Gene Sequence |
| Protein sequence |
