Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057986.t1 | XP_003598901.1 | 95.5 | 133 | 6 | 0 | 1 | 133 | 1 | 133 | 2.80E-47 | 198 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057986.t1 | G7J1N8 | 95.5 | 133 | 6 | 0 | 1 | 133 | 1 | 133 | 2.0e-47 | 198.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene057986 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene057986 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene057986 | 0.824281 | 8.79E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene057986 | 0.840315 | 9.37E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene057986 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene057986 | 0.815323 | 9.80E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene057986 | 0.831611 | 1.51E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene057986 | 0.80469 | 1.91E-49 | -1.69E-46 |
| MS.gene050876 | MS.gene057986 | 0.835672 | 1.46E-56 | -1.69E-46 |
| MS.gene05087 | MS.gene057986 | 0.807642 | 4.58E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene057986 | 0.820559 | 6.43E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene057986 | 0.811901 | 5.55E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene057986 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene057986 | 0.814967 | 1.18E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene057986 | 0.822174 | 2.73E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene057986 | 0.815556 | 8.70E-52 | -1.69E-46 |
| MS.gene055776 | MS.gene057986 | 0.80813 | 3.60E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene057986 | 0.825869 | 3.71E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene058773 | 0.811099 | 8.29E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene059022 | 0.837315 | 5.59E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene059026 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene059677 | 0.837218 | 5.92E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene059837 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene060703 | 0.839044 | 2.01E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene060762 | 0.810979 | 8.80E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene06077 | 0.816347 | 5.79E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene060982 | 0.808724 | 2.69E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene061150 | 0.813842 | 2.09E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene061340 | 0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene063080 | 0.823365 | 1.44E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene063091 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene063410 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene064019 | -0.800674 | 1.29E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene06408 | 0.821319 | 4.30E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene064435 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene06445 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene064665 | 0.804028 | 2.63E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene064800 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene064862 | 0.827001 | 1.99E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene065658 | 0.815466 | 9.11E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene066054 | 0.817202 | 3.73E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene066565 | 0.817036 | 4.06E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene067060 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene067479 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene067555 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene068224 | 0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene068771 | 0.809104 | 2.23E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene069575 | 0.835592 | 1.53E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene069995 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene071308 | 0.812311 | 4.52E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene071528 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene072795 | -0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene072875 | 0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene073565 | 0.815648 | 8.30E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene074194 | 0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene074503 | 0.802287 | 6.03E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene074566 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene074567 | 0.804536 | 2.06E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene074568 | 0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene07607 | 0.800168 | 1.64E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene09661 | 0.834879 | 2.32E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene09720 | 0.836181 | 1.09E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene09722 | 0.82436 | 8.42E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene20919 | 0.828865 | 7.09E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene21128 | 0.846104 | 2.68E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene21474 | 0.825671 | 4.13E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene21845 | 0.8393 | 1.72E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene22219 | 0.819697 | 1.01E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene22569 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene22667 | 0.80603 | 1.00E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene22670 | 0.834797 | 2.43E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene22726 | 0.824135 | 9.51E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene22826 | 0.849825 | 2.52E-60 | -1.69E-46 |
| MS.gene057986 | MS.gene23018 | 0.834123 | 3.60E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene23352 | 0.811893 | 5.58E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene23996 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene24024 | 0.809483 | 1.85E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene24025 | 0.8378 | 4.20E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene24329 | 0.803763 | 2.99E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene24767 | 0.829917 | 3.94E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene25011 | 0.811099 | 8.29E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene25483 | 0.846143 | 2.61E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene25666 | 0.829415 | 5.21E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene25675 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene25677 | 0.820959 | 5.21E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene26384 | 0.846553 | 2.02E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene26385 | 0.830019 | 3.72E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene26662 | 0.844462 | 7.45E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene26698 | 0.827031 | 1.96E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene27061 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene27893 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene29925 | 0.823484 | 1.35E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene29927 | 0.823125 | 1.64E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene31003 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene31552 | 0.836705 | 8.00E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene31988 | 0.811893 | 5.58E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene32026 | 0.842487 | 2.51E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene32251 | 0.808537 | 2.95E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene33500 | 0.832746 | 7.93E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene33825 | 0.817053 | 4.03E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene34133 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene34678 | 0.818417 | 1.98E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene36317 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene37487 | 0.84515 | 4.86E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene38046 | 0.805017 | 1.64E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene38112 | 0.819986 | 8.71E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene38655 | 0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene38715 | 0.811786 | 5.88E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene39520 | 0.848257 | 6.88E-60 | -1.69E-46 |
| MS.gene057986 | MS.gene41633 | 0.866297 | 3.16E-65 | -1.69E-46 |
| MS.gene057986 | MS.gene41636 | 0.82876 | 7.51E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene42342 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene42631 | 0.880406 | 5.64E-70 | -1.69E-46 |
| MS.gene057986 | MS.gene42636 | 0.883653 | 3.74E-71 | -1.69E-46 |
| MS.gene057986 | MS.gene42676 | 0.860351 | 2.19E-63 | -1.69E-46 |
| MS.gene057986 | MS.gene42678 | 0.815468 | 9.10E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene43492 | 0.86733 | 1.48E-65 | -1.69E-46 |
| MS.gene057986 | MS.gene44099 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene44487 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene44913 | 0.808171 | 3.53E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene45693 | 0.845222 | 4.65E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene45730 | 0.807527 | 4.84E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene46300 | 0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene47475 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene47809 | 0.851739 | 7.29E-61 | -1.69E-46 |
| MS.gene057986 | MS.gene47811 | 0.825939 | 3.57E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene47889 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene47951 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene48506 | 0.809785 | 1.59E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene49126 | 0.819661 | 1.03E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene51150 | 0.818791 | 1.63E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene51168 | 0.840944 | 6.41E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene51927 | 0.823386 | 1.42E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene52287 | 0.82374 | 1.18E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene52289 | 0.814599 | 1.42E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene52799 | 0.814121 | 1.81E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene54709 | 0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene55685 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene55694 | 0.840722 | 7.33E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene55865 | 0.801008 | 1.10E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene55911 | 0.802103 | 6.58E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene56456 | 0.825655 | 4.16E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene57034 | 0.83738 | 5.38E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene57132 | 0.831748 | 1.40E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene57647 | 0.815051 | 1.13E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene58374 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene58466 | 0.836721 | 7.92E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene59138 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene59286 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene59555 | -0.801087 | 1.06E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene60360 | 0.822855 | 1.90E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene60712 | 0.809869 | 1.53E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene62058 | 0.841719 | 4.01E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene62792 | 0.819793 | 9.64E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene62850 | 0.824519 | 7.73E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene62986 | 0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene65744 | 0.805992 | 1.02E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene66360 | -0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene67232 | 0.812105 | 5.01E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene68071 | 0.827151 | 1.83E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene68124 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene68126 | 0.812859 | 3.43E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene69357 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene69734 | 0.817777 | 2.77E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene70326 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene70468 | 0.868222 | 7.67E-66 | -1.69E-46 |
| MS.gene057986 | MS.gene70692 | 0.832366 | 9.85E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene71710 | 0.813046 | 3.12E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene72004 | 0.806949 | 6.42E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene72106 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene72216 | 0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene72363 | 0.837187 | 6.02E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene72999 | 0.829628 | 4.63E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene73819 | 0.811763 | 5.95E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene74217 | 0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene74579 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene74655 | 0.84158 | 4.36E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene75231 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene75639 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene75688 | 0.8037 | 3.08E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene75806 | 0.80231 | 5.96E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene76418 | 0.811254 | 7.68E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene76492 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene76500 | 0.823621 | 1.26E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene76503 | 0.852126 | 5.66E-61 | -1.69E-46 |
| MS.gene057986 | MS.gene77615 | 0.805464 | 1.32E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene77650 | 0.837705 | 4.44E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene80239 | 0.830433 | 2.94E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene80804 | 0.801776 | 7.68E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene81067 | 0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene81230 | 0.812469 | 4.17E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene81275 | 0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene82401 | 0.85687 | 2.40E-62 | -1.69E-46 |
| MS.gene057986 | MS.gene82403 | 0.847921 | 8.51E-60 | -1.69E-46 |
| MS.gene057986 | MS.gene83126 | 0.805541 | 1.27E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene83606 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene85117 | 0.838228 | 3.26E-57 | -1.69E-46 |
| MS.gene057986 | MS.gene85119 | 0.844846 | 5.87E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene86206 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene88666 | -0.800333 | 1.51E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene89091 | 0.82534 | 4.95E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene89341 | 0.805505 | 1.29E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene90364 | 0.816118 | 6.52E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene90796 | 0.82002 | 8.55E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene91155 | 0.82166 | 3.59E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene91801 | 0.831129 | 1.99E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene91963 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene057986 | MS.gene92153 | 0.8101 | 1.36E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene92189 | 0.853963 | 1.69E-61 | -1.69E-46 |
| MS.gene057986 | MS.gene92976 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene93362 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene93734 | 0.834786 | 2.45E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene94806 | 0.849783 | 2.59E-60 | -1.69E-46 |
| MS.gene057986 | MS.gene94829 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene95037 | 0.857844 | 1.24E-62 | -1.69E-46 |
| MS.gene057986 | MS.gene95638 | 0.819168 | 1.34E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene96309 | 0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene96524 | 0.842592 | 2.35E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene97731 | 0.833143 | 6.32E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene99670 | 0.803673 | 3.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057986.t1 | MTR_3g023160 | 95.489 | 133 | 6 | 0 | 1 | 133 | 1 | 133 | 1.01e-75 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057986.t1 | AT4G31560 | 46.897 | 145 | 55 | 7 | 1 | 132 | 1 | 136 | 1.05e-26 | 97.4 |
Find 42 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGCCGCAACAGGCCTAAA+AGG | 0.219871 | 3.4:+14599938 | MS.gene057986:CDS |
| CTTCACATTCCCTTCCTTGC+GGG | 0.249184 | 3.4:+14598181 | MS.gene057986:CDS |
| TCCTTCCACGTGGCCGCAAC+AGG | 0.325588 | 3.4:+14599929 | MS.gene057986:CDS |
| GTGACCACCGTCGCGGTTCT+CGG | 0.360693 | 3.4:-14598254 | None:intergenic |
| TTACCTCTTCGTAGAAATCT+TGG | 0.389702 | 3.4:-14598382 | None:intergenic |
| CTCTTCTCCTCACCGGCTGC+CGG | 0.412074 | 3.4:+14598228 | MS.gene057986:CDS |
| AATGTGAAGGAATGAGAAAT+TGG | 0.412756 | 3.4:-14598167 | None:intergenic |
| GCACTTCCTCTTTCTCTCCT+CGG | 0.413957 | 3.4:+14598317 | MS.gene057986:CDS |
| GAAGGTGGGGCCCGCAAGGA+AGG | 0.432992 | 3.4:-14598191 | None:intergenic |
| GCCTGTTGCGGCCACGTGGA+AGG | 0.472208 | 3.4:-14599930 | None:intergenic |
| CCGTCGCGGTTCTCGGTCTC+CGG | 0.473735 | 3.4:-14598247 | None:intergenic |
| GGCGAAGAACGAAGCTATCA+TGG | 0.476969 | 3.4:+14599831 | MS.gene057986:CDS |
| TTCACAAGAAGAACAAGAAC+CGG | 0.477138 | 3.4:+14599906 | MS.gene057986:CDS |
| GCGACGGTGGTCACACGTGC+TGG | 0.481713 | 3.4:+14598263 | MS.gene057986:CDS |
| GGTTCTCGGTCTCCGGCAGC+CGG | 0.492759 | 3.4:-14598240 | None:intergenic |
| GGCGGATAGTTGCGTGAAGG+TGG | 0.494512 | 3.4:-14598206 | None:intergenic |
| TTGCGGCCACGTGGAAGGAC+CGG | 0.505790 | 3.4:-14599925 | None:intergenic |
| TGGCCGCAACAGGCCTAAAA+GGG | 0.513982 | 3.4:+14599939 | MS.gene057986:CDS |
| AAGGTGGGGCCCGCAAGGAA+GGG | 0.516105 | 3.4:-14598190 | None:intergenic |
| GTTACACCGAGGAGAGAAAG+AGG | 0.516375 | 3.4:-14598323 | None:intergenic |
| TTTCACTGCTCTTCGAATTG+GGG | 0.518302 | 3.4:+14598349 | MS.gene057986:CDS |
| CGGCAGCCGGTGAGGAGAAG+AGG | 0.525624 | 3.4:-14598227 | None:intergenic |
| CCTTCACATTCCCTTCCTTG+CGG | 0.535091 | 3.4:+14598180 | MS.gene057986:CDS |
| AATTGACGAAGAGGAAGAAG+AGG | 0.548103 | 3.4:+14599855 | MS.gene057986:CDS |
| TCGGTCTCCGGCAGCCGGTG+AGG | 0.549955 | 3.4:-14598235 | None:intergenic |
| GCGTGAAGGTGGGGCCCGCA+AGG | 0.554379 | 3.4:-14598195 | None:intergenic |
| GCGGATAGTTGCGTGAAGGT+GGG | 0.555319 | 3.4:-14598205 | None:intergenic |
| CGGATAGTTGCGTGAAGGTG+GGG | 0.580678 | 3.4:-14598204 | None:intergenic |
| TGAGAAATTGGATTAGAGAG+TGG | 0.588473 | 3.4:-14598155 | None:intergenic |
| TGACCAAGATTTCTACGAAG+AGG | 0.594220 | 3.4:+14598379 | MS.gene057986:CDS |
| TATCATGGAAATTGACGAAG+AGG | 0.608853 | 3.4:+14599846 | MS.gene057986:CDS |
| GAGTGGAAATAACGTCGCCA+TGG | 0.612641 | 3.4:-14598138 | None:intergenic |
| TATCCGCCTCTTCTCCTCAC+CGG | 0.636664 | 3.4:+14598221 | MS.gene057986:CDS |
| TTAGGCCTGTTGCGGCCACG+TGG | 0.641712 | 3.4:-14599934 | None:intergenic |
| GAGACCGAGAACCGCGACGG+TGG | 0.655284 | 3.4:+14598250 | MS.gene057986:CDS |
| CCGGAGACCGAGAACCGCGA+CGG | 0.661053 | 3.4:+14598247 | MS.gene057986:CDS |
| CCGCAAGGAAGGGAATGTGA+AGG | 0.673491 | 3.4:-14598180 | None:intergenic |
| CAGCCGGTGAGGAGAAGAGG+CGG | 0.673858 | 3.4:-14598224 | None:intergenic |
| AGAGGCGGATAGTTGCGTGA+AGG | 0.684271 | 3.4:-14598209 | None:intergenic |
| AGCACGTGTGACCACCGTCG+CGG | 0.691929 | 3.4:-14598261 | None:intergenic |
| CAAGAACCGGTCCTTCCACG+TGG | 0.698218 | 3.4:+14599919 | MS.gene057986:CDS |
| CAGTGAAAACAGTTACACCG+AGG | 0.760295 | 3.4:-14598334 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATATTAAATATTCATTG+AGG | - | chr3.4:14599568-14599587 | None:intergenic | 15.0% |
| !!! | CATCTTTAAAAATAAATCTT+TGG | + | chr3.4:14599410-14599429 | MS.gene057986:intron | 15.0% |
| !! | GAAATCTAAATTACAGTAAT+TGG | - | chr3.4:14599058-14599077 | None:intergenic | 20.0% |
| !! | TCATGTTAGAAATTTCTTTA+AGG | - | chr3.4:14599306-14599325 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGAGATGTT+TGG | - | chr3.4:14598969-14598988 | None:intergenic | 20.0% |
| !!! | AAATTGATTTTGAGATGTTT+GGG | - | chr3.4:14598968-14598987 | None:intergenic | 20.0% |
| !!! | AACTTCAAGTTTATCAATTA+TGG | + | chr3.4:14598915-14598934 | MS.gene057986:intron | 20.0% |
| !!! | ATGTTTTTTTTAATACCAGA+TGG | + | chr3.4:14599810-14599829 | MS.gene057986:intron | 20.0% |
| !!! | GAAAATTTCTCTTATGTTTT+GGG | + | chr3.4:14599488-14599507 | MS.gene057986:intron | 20.0% |
| !!! | TGAAAATTTCTCTTATGTTT+TGG | + | chr3.4:14599487-14599506 | MS.gene057986:intron | 20.0% |
| !!! | TGTGTAAAATTGATTGATTT+TGG | - | chr3.4:14598750-14598769 | None:intergenic | 20.0% |
| ! | AAAAAACATGTCACAAAAAC+AGG | - | chr3.4:14599799-14599818 | None:intergenic | 25.0% |
| ! | AAAAACATGTCACAAAAACA+GGG | - | chr3.4:14599798-14599817 | None:intergenic | 25.0% |
| ! | AAACAAAGAATCACATTACT+GGG | - | chr3.4:14598448-14598467 | None:intergenic | 25.0% |
| ! | AATTAGAAATTTGTGAACAG+AGG | - | chr3.4:14599711-14599730 | None:intergenic | 25.0% |
| ! | ACAATCTGGAAAATTTCTTA+AGG | - | chr3.4:14599358-14599377 | None:intergenic | 25.0% |
| ! | AGTAGAATCAAAATCCAAAA+TGG | - | chr3.4:14598709-14598728 | None:intergenic | 25.0% |
| ! | CAAATATTTCCAAAAAAGTG+TGG | - | chr3.4:14599757-14599776 | None:intergenic | 25.0% |
| ! | TATTAGTGAGTTAACTGTTT+CGG | - | chr3.4:14599611-14599630 | None:intergenic | 25.0% |
| ! | TTATAATTACCAGCTCAATA+AGG | + | chr3.4:14599666-14599685 | MS.gene057986:intron | 25.0% |
| ! | TTTGATGAAATTTCTCAACT+GGG | + | chr3.4:14598516-14598535 | MS.gene057986:intron | 25.0% |
| !! | ACACATTTAGAATCACTTAT+GGG | + | chr3.4:14598765-14598784 | MS.gene057986:intron | 25.0% |
| !! | TACACATTTAGAATCACTTA+TGG | + | chr3.4:14598764-14598783 | MS.gene057986:intron | 25.0% |
| !!! | ACTTACTTTTAGCCTATATT+TGG | - | chr3.4:14598807-14598826 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAATTGAGTGCA+AGG | - | chr3.4:14599261-14599280 | None:intergenic | 25.0% |
| !!! | CAAAATCGTTTTCTAAAGTT+GGG | + | chr3.4:14598415-14598434 | MS.gene057986:intron | 25.0% |
| AATGTGAAGGAATGAGAAAT+TGG | - | chr3.4:14598170-14598189 | None:intergenic | 30.0% | |
| ACAGTTAACTCACTAATATC+TGG | + | chr3.4:14599613-14599632 | MS.gene057986:intron | 30.0% | |
| ATAGATATTCCTTATTGAGC+TGG | - | chr3.4:14599678-14599697 | None:intergenic | 30.0% | |
| CAAACAAAGAATCACATTAC+TGG | - | chr3.4:14598449-14598468 | None:intergenic | 30.0% | |
| GACAAACGATATATCTATCT+AGG | + | chr3.4:14599156-14599175 | MS.gene057986:intron | 30.0% | |
| GTTTGATGAAATTTCTCAAC+TGG | + | chr3.4:14598515-14598534 | MS.gene057986:intron | 30.0% | |
| TAACAAGTGTTAACAGACAT+AGG | - | chr3.4:14599132-14599151 | None:intergenic | 30.0% | |
| TGATGCATTCGTTTATGTAA+AGG | + | chr3.4:14598850-14598869 | MS.gene057986:intron | 30.0% | |
| TTTCATCATAACTTGAGAGA+TGG | + | chr3.4:14599463-14599482 | MS.gene057986:intron | 30.0% | |
| ! | CTTCAACTTAGAATCCATTT+TGG | + | chr3.4:14598692-14598711 | MS.gene057986:intron | 30.0% |
| !! | CCAACTTTAGAAAACGATTT+TGG | - | chr3.4:14598417-14598436 | None:intergenic | 30.0% |
| !!! | CCAAAATCGTTTTCTAAAGT+TGG | + | chr3.4:14598414-14598433 | MS.gene057986:intron | 30.0% |
| !!! | GATTCTTAACCACACTTTTT+TGG | + | chr3.4:14599745-14599764 | MS.gene057986:intron | 30.0% |
| !!! | TAGAAAACGATTTTGGTTTG+TGG | - | chr3.4:14598410-14598429 | None:intergenic | 30.0% |
| ACATATACGCTCAGCAATAT+AGG | + | chr3.4:14599220-14599239 | MS.gene057986:intron | 35.0% | |
| ATACAAGTAGTGTTGTCATC+TGG | + | chr3.4:14598571-14598590 | MS.gene057986:intron | 35.0% | |
| CCAAATGTGGAACCAAATAT+AGG | + | chr3.4:14598792-14598811 | MS.gene057986:intron | 35.0% | |
| TACAAGTAGTGTTGTCATCT+GGG | + | chr3.4:14598572-14598591 | MS.gene057986:intron | 35.0% | |
| TATATCACATCTCGACAATC+TGG | - | chr3.4:14599372-14599391 | None:intergenic | 35.0% | |
| TATCATGGAAATTGACGAAG+AGG | + | chr3.4:14599846-14599865 | MS.gene057986:CDS | 35.0% | |
| TCACATAGCTAAAATTGCAC+AGG | - | chr3.4:14599329-14599348 | None:intergenic | 35.0% | |
| TTACCTCTTCGTAGAAATCT+TGG | - | chr3.4:14598385-14598404 | None:intergenic | 35.0% | |
| TTCACAAGAAGAACAAGAAC+CGG | + | chr3.4:14599906-14599925 | MS.gene057986:CDS | 35.0% | |
| TTCGTTTATGTAAAGGTGAG+TGG | + | chr3.4:14598857-14598876 | MS.gene057986:intron | 35.0% | |
| ! | ATGGATTCTAAGTTGAAGCT+AGG | - | chr3.4:14598690-14598709 | None:intergenic | 35.0% |
| ! | CCTATATTTGGTTCCACATT+TGG | - | chr3.4:14598795-14598814 | None:intergenic | 35.0% |
| ! | GGATAATGATGATGATGATG+TGG | + | chr3.4:14599876-14599895 | MS.gene057986:CDS | 35.0% |
| ! | TGAGAAATTGGATTAGAGAG+TGG | - | chr3.4:14598158-14598177 | None:intergenic | 35.0% |
| ! | TTTTCACTGCTCTTCGAATT+GGG | + | chr3.4:14598348-14598367 | MS.gene057986:CDS | 35.0% |
| AATTGACGAAGAGGAAGAAG+AGG | + | chr3.4:14599855-14599874 | MS.gene057986:CDS | 40.0% | |
| ACAAGTAGTGTTGTCATCTG+GGG | + | chr3.4:14598573-14598592 | MS.gene057986:intron | 40.0% | |
| ACATTCTAAGTCATGCACCA+TGG | - | chr3.4:14599195-14599214 | None:intergenic | 40.0% | |
| GGAAGATTAACCAGCTCAAA+AGG | - | chr3.4:14599097-14599116 | None:intergenic | 40.0% | |
| TCCACTAAGCAACTCTACAA+CGG | - | chr3.4:14599025-14599044 | None:intergenic | 40.0% | |
| TGACCAAGATTTCTACGAAG+AGG | + | chr3.4:14598379-14598398 | MS.gene057986:CDS | 40.0% | |
| TTTCACTGCTCTTCGAATTG+GGG | + | chr3.4:14598349-14598368 | MS.gene057986:CDS | 40.0% | |
| ! | GTTTTCACTGCTCTTCGAAT+TGG | + | chr3.4:14598347-14598366 | MS.gene057986:CDS | 40.0% |
| ACTTATGGGTGCTCCAAATG+TGG | + | chr3.4:14598779-14598798 | MS.gene057986:intron | 45.0% | |
| AGACATAGGCGCAAGTCAAA+GGG | - | chr3.4:14599118-14599137 | None:intergenic | 45.0% | |
| CAAGTAGTGTTGTCATCTGG+GGG | + | chr3.4:14598574-14598593 | MS.gene057986:intron | 45.0% | |
| CAGTGAAAACAGTTACACCG+AGG | - | chr3.4:14598337-14598356 | None:intergenic | 45.0% | |
| CCAGCTCAAAAGGCTTAGTT+TGG | - | chr3.4:14599087-14599106 | None:intergenic | 45.0% | |
| TAACTGATCAGACGTGTGCA+TGG | - | chr3.4:14599545-14599564 | None:intergenic | 45.0% | |
| TCCGTTGTAGAGTTGCTTAG+TGG | + | chr3.4:14599021-14599040 | MS.gene057986:intron | 45.0% | |
| TGAGATGTTTGGGTGCTCTT+GGG | - | chr3.4:14598958-14598977 | None:intergenic | 45.0% | |
| TTGAGATGTTTGGGTGCTCT+TGG | - | chr3.4:14598959-14598978 | None:intergenic | 45.0% | |
| ! | CAGACGTGTGCATGGATTAA+AGG | - | chr3.4:14599537-14599556 | None:intergenic | 45.0% |
| ! | CCAAACTAAGCCTTTTGAGC+TGG | + | chr3.4:14599084-14599103 | MS.gene057986:intron | 45.0% |
| CAGACATAGGCGCAAGTCAA+AGG | - | chr3.4:14599119-14599138 | None:intergenic | 50.0% | |
| CCTTCACATTCCCTTCCTTG+CGG | + | chr3.4:14598180-14598199 | MS.gene057986:CDS | 50.0% | |
| CTTCACATTCCCTTCCTTGC+GGG | + | chr3.4:14598181-14598200 | MS.gene057986:CDS | 50.0% | |
| GCACTTCCTCTTTCTCTCCT+CGG | + | chr3.4:14598317-14598336 | MS.gene057986:CDS | 50.0% | |
| GGCGAAGAACGAAGCTATCA+TGG | + | chr3.4:14599831-14599850 | MS.gene057986:CDS | 50.0% | |
| GTTACACCGAGGAGAGAAAG+AGG | - | chr3.4:14598326-14598345 | None:intergenic | 50.0% | |
| TAGCTTCGTTCTTCGCCATC+TGG | - | chr3.4:14599828-14599847 | None:intergenic | 50.0% | |
| TGTCGCTCACTTGGTTGAGT+AGG | + | chr3.4:14598602-14598621 | MS.gene057986:intron | 50.0% | |
| ! | CTTCCCTTTTAGGCCTGTTG+CGG | - | chr3.4:14599945-14599964 | None:intergenic | 50.0% |
| !! | TAGGAGTCTCTGAAGTGCCA+TGG | + | chr3.4:14599175-14599194 | MS.gene057986:intron | 50.0% |
| AGAGGCGGATAGTTGCGTGA+AGG | - | chr3.4:14598212-14598231 | None:intergenic | 55.0% | |
| CCGCAAGGAAGGGAATGTGA+AGG | - | chr3.4:14598183-14598202 | None:intergenic | 55.0% | |
| CGGATAGTTGCGTGAAGGTG+GGG | - | chr3.4:14598207-14598226 | None:intergenic | 55.0% | |
| GCGGATAGTTGCGTGAAGGT+GGG | - | chr3.4:14598208-14598227 | None:intergenic | 55.0% | |
| TATCCGCCTCTTCTCCTCAC+CGG | + | chr3.4:14598221-14598240 | MS.gene057986:CDS | 55.0% | |
| TGGCCGCAACAGGCCTAAAA+GGG | + | chr3.4:14599939-14599958 | MS.gene057986:CDS | 55.0% | |
| CAAGAACCGGTCCTTCCACG+TGG | + | chr3.4:14599919-14599938 | MS.gene057986:CDS | 60.0% | |
| GGCGGATAGTTGCGTGAAGG+TGG | - | chr3.4:14598209-14598228 | None:intergenic | 60.0% | |
| GTGGCCGCAACAGGCCTAAA+AGG | + | chr3.4:14599938-14599957 | MS.gene057986:CDS | 60.0% | |
| ! | GGGGAGTTGTGTCGCTCACT+TGG | + | chr3.4:14598593-14598612 | MS.gene057986:intron | 60.0% |
| AAGGTGGGGCCCGCAAGGAA+GGG | - | chr3.4:14598193-14598212 | None:intergenic | 65.0% | |
| AGCACGTGTGACCACCGTCG+CGG | - | chr3.4:14598264-14598283 | None:intergenic | 65.0% | |
| CAGCCGGTGAGGAGAAGAGG+CGG | - | chr3.4:14598227-14598246 | None:intergenic | 65.0% | |
| GTGACCACCGTCGCGGTTCT+CGG | - | chr3.4:14598257-14598276 | None:intergenic | 65.0% | |
| TCCTTCCACGTGGCCGCAAC+AGG | + | chr3.4:14599929-14599948 | MS.gene057986:CDS | 65.0% | |
| TTAGGCCTGTTGCGGCCACG+TGG | - | chr3.4:14599937-14599956 | None:intergenic | 65.0% | |
| TTGCGGCCACGTGGAAGGAC+CGG | - | chr3.4:14599928-14599947 | None:intergenic | 65.0% | |
| ! | CTCTTCTCCTCACCGGCTGC+CGG | + | chr3.4:14598228-14598247 | MS.gene057986:CDS | 65.0% |
| CCGGAGACCGAGAACCGCGA+CGG | + | chr3.4:14598247-14598266 | MS.gene057986:CDS | 70.0% | |
| CCGTCGCGGTTCTCGGTCTC+CGG | - | chr3.4:14598250-14598269 | None:intergenic | 70.0% | |
| CGGCAGCCGGTGAGGAGAAG+AGG | - | chr3.4:14598230-14598249 | None:intergenic | 70.0% | |
| GAAGGTGGGGCCCGCAAGGA+AGG | - | chr3.4:14598194-14598213 | None:intergenic | 70.0% | |
| GAGACCGAGAACCGCGACGG+TGG | + | chr3.4:14598250-14598269 | MS.gene057986:CDS | 70.0% | |
| GCCTGTTGCGGCCACGTGGA+AGG | - | chr3.4:14599933-14599952 | None:intergenic | 70.0% | |
| GCGACGGTGGTCACACGTGC+TGG | + | chr3.4:14598263-14598282 | MS.gene057986:CDS | 70.0% | |
| GGTTCTCGGTCTCCGGCAGC+CGG | - | chr3.4:14598243-14598262 | None:intergenic | 70.0% | |
| GCGTGAAGGTGGGGCCCGCA+AGG | - | chr3.4:14598198-14598217 | None:intergenic | 75.0% | |
| TCGGTCTCCGGCAGCCGGTG+AGG | - | chr3.4:14598238-14598257 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 14598140 | 14599969 | 14598140 | ID=MS.gene057986 |
| chr3.4 | mRNA | 14598140 | 14599969 | 14598140 | ID=MS.gene057986.t1;Parent=MS.gene057986 |
| chr3.4 | exon | 14598140 | 14598400 | 14598140 | ID=MS.gene057986.t1.exon1;Parent=MS.gene057986.t1 |
| chr3.4 | CDS | 14598140 | 14598400 | 14598140 | ID=cds.MS.gene057986.t1;Parent=MS.gene057986.t1 |
| chr3.4 | exon | 14599829 | 14599969 | 14599829 | ID=MS.gene057986.t1.exon2;Parent=MS.gene057986.t1 |
| chr3.4 | CDS | 14599829 | 14599969 | 14599829 | ID=cds.MS.gene057986.t1;Parent=MS.gene057986.t1 |
| Gene Sequence |
| Protein sequence |
