Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62892.t1 | XP_003608724.1 | 91.9 | 757 | 57 | 2 | 1 | 756 | 1 | 754 | 0.00E+00 | 1376.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62892.t1 | G7JIX8 | 91.9 | 757 | 57 | 2 | 1 | 756 | 1 | 754 | 0.0e+00 | 1376.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene62892 | 0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene62892 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene050605 | MS.gene62892 | 0.824023 | 1.01E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene62892 | 0.816801 | 4.58E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene62892 | 0.811943 | 5.44E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene62892 | 0.835427 | 1.69E-56 | -1.69E-46 |
| MS.gene051926 | MS.gene62892 | -0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene62892 | 0.847032 | 1.49E-59 | -1.69E-46 |
| MS.gene052426 | MS.gene62892 | 0.824074 | 9.83E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene62892 | 0.822081 | 2.87E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene62892 | 0.828043 | 1.12E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene62892 | 0.829959 | 3.84E-55 | -1.69E-46 |
| MS.gene052954 | MS.gene62892 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene62892 | 0.850935 | 1.23E-60 | -1.69E-46 |
| MS.gene05415 | MS.gene62892 | 0.826622 | 2.45E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene62892 | 0.809551 | 1.79E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene62892 | 0.810454 | 1.14E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene62892 | 0.827575 | 1.45E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene62892 | 0.840651 | 7.65E-58 | -1.69E-46 |
| MS.gene054994 | MS.gene62892 | 0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene62892 | 0.825722 | 4.02E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene62892 | 0.812646 | 3.82E-51 | -1.69E-46 |
| MS.gene055230 | MS.gene62892 | 0.831405 | 1.70E-55 | -1.69E-46 |
| MS.gene055356 | MS.gene62892 | 0.817251 | 3.63E-52 | -1.69E-46 |
| MS.gene055367 | MS.gene62892 | 0.807145 | 5.83E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene62892 | 0.862557 | 4.66E-64 | -1.69E-46 |
| MS.gene055926 | MS.gene62892 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene62892 | 0.823033 | 1.72E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene62892 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene057156 | MS.gene62892 | -0.848557 | 5.68E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene62892 | 0.82443 | 8.10E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene62892 | 0.803375 | 3.59E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene62892 | 0.81207 | 5.10E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene62892 | 0.813914 | 2.01E-51 | -1.69E-46 |
| MS.gene058548 | MS.gene62892 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene62892 | 0.81286 | 3.43E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene62892 | 0.835384 | 1.73E-56 | -1.69E-46 |
| MS.gene059128 | MS.gene62892 | 0.806995 | 6.27E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene62892 | 0.843684 | 1.20E-58 | -1.69E-46 |
| MS.gene059440 | MS.gene62892 | 0.807021 | 6.19E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene62892 | 0.824732 | 6.88E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene62892 | 0.829179 | 5.95E-55 | -1.69E-46 |
| MS.gene060683 | MS.gene62892 | 0.81357 | 2.39E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene62892 | 0.814723 | 1.33E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene62892 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene62892 | 0.824859 | 6.42E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62892.t1 | MTR_4g101050 | 92.999 | 757 | 49 | 2 | 1 | 756 | 1 | 754 | 0.0 | 1409 |
| MS.gene62892.t1 | MTR_4g101070 | 83.245 | 758 | 123 | 2 | 1 | 756 | 3 | 758 | 0.0 | 1286 |
| MS.gene62892.t1 | MTR_4g101070 | 84.941 | 591 | 85 | 2 | 1 | 589 | 3 | 591 | 0.0 | 1024 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62892.t1 | AT4G17250 | 47.203 | 733 | 373 | 8 | 6 | 731 | 3 | 728 | 0.0 | 679 |
| MS.gene62892.t1 | AT5G47580 | 48.000 | 725 | 363 | 6 | 6 | 723 | 6 | 723 | 0.0 | 657 |
| MS.gene62892.t1 | AT4G17250 | 49.761 | 627 | 306 | 6 | 6 | 628 | 3 | 624 | 0.0 | 625 |
| MS.gene62892.t1 | AT4G17250 | 44.811 | 636 | 337 | 8 | 103 | 731 | 1 | 629 | 0.0 | 542 |
Find 121 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAACACTTCTCAATATT+TGG | 0.113246 | 8.1:-22208192 | None:intergenic |
| AAAACTTGTTATTGAGTTAT+TGG | 0.157880 | 8.1:+22208029 | MS.gene62892:CDS |
| GCACAAATTCTACTAAATTA+AGG | 0.193234 | 8.1:+22208901 | MS.gene62892:CDS |
| AGACAAGCAGTTTATGTTCT+TGG | 0.232324 | 8.1:+22208723 | MS.gene62892:CDS |
| GAGATGAATTGATGAAATTT+TGG | 0.235831 | 8.1:+22207311 | MS.gene62892:CDS |
| ACTTCCTAAACCACCGATTA+TGG | 0.236006 | 8.1:-22207702 | None:intergenic |
| GGTTCTAGCGTTTCGAGTTT+AGG | 0.274993 | 8.1:+22207874 | MS.gene62892:CDS |
| TTTGACGGAAACAGCGATTA+TGG | 0.290610 | 8.1:-22206876 | None:intergenic |
| TCAGTTTCATGTACTGCTTC+TGG | 0.302903 | 8.1:+22207376 | MS.gene62892:CDS |
| AATAACTCAATAACAAGTTT+TGG | 0.309727 | 8.1:-22208027 | None:intergenic |
| TACCCTATGTGTTGGATCTT+GGG | 0.320599 | 8.1:+22207820 | MS.gene62892:CDS |
| GGTGATAATTGCTGATATAT+TGG | 0.324339 | 8.1:+22208620 | MS.gene62892:CDS |
| TTACCCTATGTGTTGGATCT+TGG | 0.340486 | 8.1:+22207819 | MS.gene62892:CDS |
| CTGGTGTTATCTATGAGTTT+TGG | 0.346173 | 8.1:+22207101 | MS.gene62892:CDS |
| ATTTGTATACAGTTTGTAAC+TGG | 0.348616 | 8.1:+22207082 | MS.gene62892:CDS |
| TTCGATCTTATTTGATGTCT+TGG | 0.352328 | 8.1:+22207443 | MS.gene62892:CDS |
| GGATCCATAATCGGTGGTTT+AGG | 0.355959 | 8.1:+22207698 | MS.gene62892:CDS |
| CACAAATTCTACTAAATTAA+GGG | 0.366106 | 8.1:+22208902 | MS.gene62892:CDS |
| GTGTAGAACCTCCATATAAT+TGG | 0.370757 | 8.1:+22208127 | MS.gene62892:CDS |
| TGAAACCATGATGAATGTTT+TGG | 0.374188 | 8.1:+22207024 | MS.gene62892:CDS |
| TCCAAATATTGAGAAGTGTT+TGG | 0.384738 | 8.1:+22208191 | MS.gene62892:CDS |
| TGGTGTTATTATGTTTGTTA+TGG | 0.385001 | 8.1:+22207132 | MS.gene62892:CDS |
| GAAAATAACATTGACAAAGA+TGG | 0.388204 | 8.1:+22208267 | MS.gene62892:CDS |
| ATGGGGAGTGACCAATTATA+TGG | 0.392822 | 8.1:-22208138 | None:intergenic |
| TTGAATCAAGATGTCATAAC+AGG | 0.394357 | 8.1:+22208561 | MS.gene62892:CDS |
| AAAGTCTCTCACTAGTGATA+TGG | 0.398070 | 8.1:-22208584 | None:intergenic |
| GCATCAGAACTCGCAAACTA+TGG | 0.407134 | 8.1:+22206813 | MS.gene62892:CDS |
| AAGTAGCTGCTGTTGGTGTT+GGG | 0.416316 | 8.1:+22207530 | MS.gene62892:CDS |
| TTATGGATCCGAAAACTAAT+CGG | 0.416338 | 8.1:-22207685 | None:intergenic |
| ATTGGGATGCAACTATTCAT+TGG | 0.418222 | 8.1:+22207980 | MS.gene62892:CDS |
| TCTGTTACGTGTTTGAATAC+TGG | 0.424899 | 8.1:+22208675 | MS.gene62892:CDS |
| TTGGGATGCAACTATTCATT+GGG | 0.426148 | 8.1:+22207981 | MS.gene62892:CDS |
| GCTAATTCTATGCCTTCTCT+TGG | 0.426410 | 8.1:+22206986 | MS.gene62892:CDS |
| CAAGTAGCTGCTGTTGGTGT+TGG | 0.430580 | 8.1:+22207529 | MS.gene62892:CDS |
| GGTTTGTTGCTGTTAGATAT+AGG | 0.434375 | 8.1:+22207575 | MS.gene62892:CDS |
| AAAATAACATTGACAAAGAT+GGG | 0.438230 | 8.1:+22208268 | MS.gene62892:CDS |
| GGTGTCCAAATGTGAGGAAA+AGG | 0.448572 | 8.1:+22207596 | MS.gene62892:CDS |
| TGGAAGGGTATTGGACTGAT+AGG | 0.449136 | 8.1:+22207641 | MS.gene62892:CDS |
| TTGCAAGGATTCAAAGGAGT+TGG | 0.456334 | 8.1:+22208069 | MS.gene62892:CDS |
| GTGATAATTGCTGATATATT+GGG | 0.460994 | 8.1:+22208621 | MS.gene62892:CDS |
| AGCATGGCCTATAAAAGTAT+TGG | 0.464015 | 8.1:+22208497 | MS.gene62892:CDS |
| AGCAGTCCTCAATTTATACT+TGG | 0.465661 | 8.1:+22207349 | MS.gene62892:CDS |
| AGGTGATGATGAAAGACAAT+TGG | 0.467748 | 8.1:+22207962 | MS.gene62892:CDS |
| TAATCGGTGGTTTAGGAAGT+TGG | 0.470451 | 8.1:+22207705 | MS.gene62892:CDS |
| ATCTTATTTGATGTCTTGGT+CGG | 0.471584 | 8.1:+22207447 | MS.gene62892:CDS |
| TTGTGTATTAAACTACAGAT+AGG | 0.474492 | 8.1:+22207757 | MS.gene62892:CDS |
| ATGCTTGCTAGTGTCACAAT+GGG | 0.474989 | 8.1:-22208156 | None:intergenic |
| CTATTGCTCCTGCTTTGAGA+TGG | 0.477023 | 8.1:+22207554 | MS.gene62892:CDS |
| TGCCATGATTTGCACTATCA+TGG | 0.477597 | 8.1:+22206964 | MS.gene62892:CDS |
| AAAACAACAAGAGTTTGATA+AGG | 0.479736 | 8.1:+22207273 | MS.gene62892:CDS |
| TAGATTCCTATCCATGGCAT+TGG | 0.480860 | 8.1:-22206734 | None:intergenic |
| CACCATGCAAAGGAAGAATT+CGG | 0.481803 | 8.1:-22208107 | None:intergenic |
| TTTCAATTTACCCTATGTGT+TGG | 0.483405 | 8.1:+22207812 | MS.gene62892:CDS |
| TCCCTCTGTACTATCTTCAC+TGG | 0.489314 | 8.1:+22208863 | MS.gene62892:CDS |
| ATCTTGATTCAACAGAAGAA+TGG | 0.490265 | 8.1:-22208550 | None:intergenic |
| CACGTAACAGATATAACATA+AGG | 0.492851 | 8.1:-22208663 | None:intergenic |
| ACGAAAGATAAAACATTACA+TGG | 0.495365 | 8.1:+22207195 | MS.gene62892:CDS |
| ACAGCGGAAATTGTGTGGCT+TGG | 0.498066 | 8.1:+22208312 | MS.gene62892:CDS |
| AGCGTTTCGAGTTTAGGATC+AGG | 0.502068 | 8.1:+22207880 | MS.gene62892:CDS |
| ATAGTTCAAGTAGCTGCTGT+TGG | 0.504833 | 8.1:+22207523 | MS.gene62892:CDS |
| TGATCATGCCGGTGAGGCAT+AGG | 0.505034 | 8.1:-22206920 | None:intergenic |
| GTGGGACTAATATTGAAGAT+TGG | 0.516737 | 8.1:+22208808 | MS.gene62892:CDS |
| GGTGATGATGAAAGACAATT+GGG | 0.520329 | 8.1:+22207963 | MS.gene62892:CDS |
| AGTTTGATAAGGTTACTGAT+AGG | 0.520646 | 8.1:+22207284 | MS.gene62892:CDS |
| AGGAGAGGAAGAGTTGGTTG+AGG | 0.523488 | 8.1:+22207942 | MS.gene62892:CDS |
| TGTGTATTAAACTACAGATA+GGG | 0.533409 | 8.1:+22207758 | MS.gene62892:CDS |
| CATAGCCAAAACATTCATCA+TGG | 0.534666 | 8.1:-22207029 | None:intergenic |
| CCTAGAGTGGATTTCTGCCG+TGG | 0.535174 | 8.1:+22208789 | MS.gene62892:CDS |
| GTCCTCAATTTATACTTGGA+AGG | 0.536449 | 8.1:+22207353 | MS.gene62892:CDS |
| GAGATCAACGGAGAGTTTGA+CGG | 0.537395 | 8.1:-22206891 | None:intergenic |
| TTTAGGATCAGGCACAAAGC+AGG | 0.537499 | 8.1:+22207891 | MS.gene62892:CDS |
| AAAGAGAGCATTTCCTAGAG+TGG | 0.537845 | 8.1:+22208776 | MS.gene62892:CDS |
| TGGTCGGTTAAATTCTGCAC+TGG | 0.538042 | 8.1:+22207463 | MS.gene62892:CDS |
| TTGAGACAAAAGTATTTGCA+AGG | 0.538484 | 8.1:-22206839 | None:intergenic |
| TAATTTAGTAGAATTTGTGC+AGG | 0.538913 | 8.1:-22208898 | None:intergenic |
| TCAATCTTGCAAGGATTCAA+AGG | 0.541067 | 8.1:+22208063 | MS.gene62892:CDS |
| GACCGAATTCTTCCTTTGCA+TGG | 0.544863 | 8.1:+22208105 | MS.gene62892:CDS |
| CTGGTGAATGTGATTACAAA+TGG | 0.547354 | 8.1:+22207482 | MS.gene62892:CDS |
| GAACTGATCTCTATAGAAAG+TGG | 0.548534 | 8.1:+22208334 | MS.gene62892:CDS |
| AGCCATGATAGTGCAAATCA+TGG | 0.549705 | 8.1:-22206966 | None:intergenic |
| ATCCCAAGATCCAACACATA+GGG | 0.550450 | 8.1:-22207822 | None:intergenic |
| TCAACACTCCTATGCCTCAC+CGG | 0.551904 | 8.1:+22206912 | MS.gene62892:CDS |
| AAGAATATGTGCAACAGTGA+AGG | 0.562876 | 8.1:+22206683 | MS.gene62892:CDS |
| GACCTTCCAAGTATAAATTG+AGG | 0.576629 | 8.1:-22207355 | None:intergenic |
| ATTTCAGCAAACCAATGCCA+TGG | 0.577285 | 8.1:+22206723 | MS.gene62892:CDS |
| AATCCCAAGATCCAACACAT+AGG | 0.577754 | 8.1:-22207823 | None:intergenic |
| CGGTTTATTCTGCATCTCGA+AGG | 0.578932 | 8.1:+22207922 | MS.gene62892:CDS |
| ATGGGGAATTCATTAAAGCT+CGG | 0.585709 | 8.1:+22208286 | MS.gene62892:CDS |
| CCACGGCAGAAATCCACTCT+AGG | 0.586419 | 8.1:-22208789 | None:intergenic |
| GCTTTGCTAGCTGATCATGC+CGG | 0.587589 | 8.1:-22206931 | None:intergenic |
| AATGCTTGCTAGTGTCACAA+TGG | 0.588252 | 8.1:-22208157 | None:intergenic |
| GCTATGTAGATTCCTATCCA+TGG | 0.588339 | 8.1:-22206740 | None:intergenic |
| GCAACAAACCATCTCAAAGC+AGG | 0.589830 | 8.1:-22207562 | None:intergenic |
| GTTTAATGCTTAAGCAGAAG+AGG | 0.590609 | 8.1:+22208832 | MS.gene62892:CDS |
| CTAGAGTGGATTTCTGCCGT+GGG | 0.592323 | 8.1:+22208790 | MS.gene62892:CDS |
| GCGAGAAGAATCAAACTCAA+AGG | 0.592711 | 8.1:+22207249 | MS.gene62892:CDS |
| TCCAGTGAAGATAGTACAGA+GGG | 0.597861 | 8.1:-22208864 | None:intergenic |
| GGAAACAGCGATTATGGTCA+AGG | 0.602310 | 8.1:-22206870 | None:intergenic |
| TCTCGAAGGAGAGGAAGAGT+TGG | 0.603815 | 8.1:+22207936 | MS.gene62892:CDS |
| TTCTGCGTTACACCAAGAGA+AGG | 0.609942 | 8.1:-22206998 | None:intergenic |
| ATGTCTGCAGATCTCATCAA+AGG | 0.611092 | 8.1:+22206791 | MS.gene62892:CDS |
| AGCAAACCAATGCCATGGAT+AGG | 0.618922 | 8.1:+22206728 | MS.gene62892:CDS |
| AATCTTCAATATTAGTCCCA+CGG | 0.619042 | 8.1:-22208806 | None:intergenic |
| ACTATTCATTGGGTTCAACA+AGG | 0.621311 | 8.1:+22207991 | MS.gene62892:CDS |
| CTCTGTACTATCTTCACTGG+AGG | 0.621968 | 8.1:+22208866 | MS.gene62892:CDS |
| GGAAAACAGCGGAAATTGTG+TGG | 0.624134 | 8.1:+22208307 | MS.gene62892:CDS |
| TATTCTGCATCTCGAAGGAG+AGG | 0.624822 | 8.1:+22207927 | MS.gene62892:CDS |
| GATATAGGTGTCCAAATGTG+AGG | 0.626396 | 8.1:+22207590 | MS.gene62892:CDS |
| CATAGGAGTGTTGAGATCAA+CGG | 0.634065 | 8.1:-22206903 | None:intergenic |
| GGAGGTTCTACACCATGCAA+AGG | 0.640891 | 8.1:-22208117 | None:intergenic |
| GCTAGCTGATCATGCCGGTG+AGG | 0.641170 | 8.1:-22206926 | None:intergenic |
| TGAGACAAAAGTATTTGCAA+GGG | 0.647084 | 8.1:-22206838 | None:intergenic |
| GGGAGTGACCAATTATATGG+AGG | 0.669045 | 8.1:-22208135 | None:intergenic |
| TTAAAGTAAGTCCTTCAGCA+TGG | 0.672802 | 8.1:+22208481 | MS.gene62892:CDS |
| TATTAAACTACAGATAGGGA+TGG | 0.673003 | 8.1:+22207762 | MS.gene62892:CDS |
| AAATAACATTGACAAAGATG+GGG | 0.675781 | 8.1:+22208269 | MS.gene62892:CDS |
| CATTAAAGCTCGGAAAACAG+CGG | 0.676723 | 8.1:+22208296 | MS.gene62892:CDS |
| GTATTGGACTGATAGGCTAG+TGG | 0.680875 | 8.1:+22207648 | MS.gene62892:CDS |
| CTCCAGTGAAGATAGTACAG+AGG | 0.707560 | 8.1:-22208865 | None:intergenic |
| TGCTTGCTAGTGTCACAATG+GGG | 0.738579 | 8.1:-22208155 | None:intergenic |
| GCACAAAGCAGGATCTACGA+CGG | 0.742357 | 8.1:+22207902 | MS.gene62892:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACATTGACAAAGAT+GGG | + | chr8.1:22208268-22208287 | MS.gene62892:CDS | 20.0% |
| !! | CACAAATTCTACTAAATTAA+GGG | + | chr8.1:22208902-22208921 | MS.gene62892:CDS | 20.0% |
| !!! | AAAACTTGTTATTGAGTTAT+TGG | + | chr8.1:22208029-22208048 | MS.gene62892:CDS | 20.0% |
| !!! | AATAACTCAATAACAAGTTT+TGG | - | chr8.1:22208030-22208049 | None:intergenic | 20.0% |
| ! | AAAAAATGTTCAATCTTGCA+AGG | + | chr8.1:22208054-22208073 | MS.gene62892:CDS | 25.0% |
| ! | AAAACAACAAGAGTTTGATA+AGG | + | chr8.1:22207273-22207292 | MS.gene62892:CDS | 25.0% |
| ! | AAATAACATTGACAAAGATG+GGG | + | chr8.1:22208269-22208288 | MS.gene62892:CDS | 25.0% |
| ! | ACGAAAGATAAAACATTACA+TGG | + | chr8.1:22207195-22207214 | MS.gene62892:CDS | 25.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | + | chr8.1:22207082-22207101 | MS.gene62892:CDS | 25.0% |
| ! | GAAAATAACATTGACAAAGA+TGG | + | chr8.1:22208267-22208286 | MS.gene62892:CDS | 25.0% |
| ! | GCACAAATTCTACTAAATTA+AGG | + | chr8.1:22208901-22208920 | MS.gene62892:CDS | 25.0% |
| ! | GTGATAATTGCTGATATATT+GGG | + | chr8.1:22208621-22208640 | MS.gene62892:CDS | 25.0% |
| ! | TAATTTAGTAGAATTTGTGC+AGG | - | chr8.1:22208901-22208920 | None:intergenic | 25.0% |
| ! | TGTGTATTAAACTACAGATA+GGG | + | chr8.1:22207758-22207777 | MS.gene62892:CDS | 25.0% |
| ! | TTGTGTATTAAACTACAGAT+AGG | + | chr8.1:22207757-22207776 | MS.gene62892:CDS | 25.0% |
| !! | ATTGATGAAATTTTGGATGA+TGG | + | chr8.1:22207318-22207337 | MS.gene62892:CDS | 25.0% |
| !! | GAGATGAATTGATGAAATTT+TGG | + | chr8.1:22207311-22207330 | MS.gene62892:CDS | 25.0% |
| !! | TTTTCTATGAACTTCACATA+AGG | - | chr8.1:22208252-22208271 | None:intergenic | 25.0% |
| !!! | AAGAAAATTTTTCAAGTGGA+AGG | + | chr8.1:22207625-22207644 | MS.gene62892:CDS | 25.0% |
| !!! | AGAAAATTTTTCAAGTGGAA+GGG | + | chr8.1:22207626-22207645 | MS.gene62892:CDS | 25.0% |
| !!! | TGGTGTTATTATGTTTGTTA+TGG | + | chr8.1:22207132-22207151 | MS.gene62892:CDS | 25.0% |
| !!! | TTTGAAGCCAATACTTTTAT+AGG | - | chr8.1:22208507-22208526 | None:intergenic | 25.0% |
| AATCTTCAATATTAGTCCCA+CGG | - | chr8.1:22208809-22208828 | None:intergenic | 30.0% | |
| ACCAAACACTTCTCAATATT+TGG | - | chr8.1:22208195-22208214 | None:intergenic | 30.0% | |
| AGTTTGATAAGGTTACTGAT+AGG | + | chr8.1:22207284-22207303 | MS.gene62892:CDS | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | - | chr8.1:22208553-22208572 | None:intergenic | 30.0% | |
| CACGTAACAGATATAACATA+AGG | - | chr8.1:22208666-22208685 | None:intergenic | 30.0% | |
| GGTGATAATTGCTGATATAT+TGG | + | chr8.1:22208620-22208639 | MS.gene62892:CDS | 30.0% | |
| TATTAAACTACAGATAGGGA+TGG | + | chr8.1:22207762-22207781 | MS.gene62892:CDS | 30.0% | |
| TTATGGATCCGAAAACTAAT+CGG | - | chr8.1:22207688-22207707 | None:intergenic | 30.0% | |
| TTGAATCAAGATGTCATAAC+AGG | + | chr8.1:22208561-22208580 | MS.gene62892:CDS | 30.0% | |
| TTTCAATTTACCCTATGTGT+TGG | + | chr8.1:22207812-22207831 | MS.gene62892:CDS | 30.0% | |
| ! | ATCTTATTTGATGTCTTGGT+CGG | + | chr8.1:22207447-22207466 | MS.gene62892:CDS | 30.0% |
| ! | TGAAACCATGATGAATGTTT+TGG | + | chr8.1:22207024-22207043 | MS.gene62892:CDS | 30.0% |
| ! | TTCGATCTTATTTGATGTCT+TGG | + | chr8.1:22207443-22207462 | MS.gene62892:CDS | 30.0% |
| !! | TCCAAATATTGAGAAGTGTT+TGG | + | chr8.1:22208191-22208210 | MS.gene62892:CDS | 30.0% |
| !! | TGAGACAAAAGTATTTGCAA+GGG | - | chr8.1:22206841-22206860 | None:intergenic | 30.0% |
| !! | TTAGTTTTCGGATCCATAAT+CGG | + | chr8.1:22207689-22207708 | MS.gene62892:CDS | 30.0% |
| !! | TTGAGACAAAAGTATTTGCA+AGG | - | chr8.1:22206842-22206861 | None:intergenic | 30.0% |
| !!! | CTGCAAGAAAATTTTTCAAG+TGG | + | chr8.1:22207621-22207640 | MS.gene62892:CDS | 30.0% |
| !!! | TATGAGTTTTGGATTGAACA+TGG | + | chr8.1:22207112-22207131 | MS.gene62892:CDS | 30.0% |
| AAAGTCTCTCACTAGTGATA+TGG | - | chr8.1:22208587-22208606 | None:intergenic | 35.0% | |
| AAGAATATGTGCAACAGTGA+AGG | + | chr8.1:22206683-22206702 | MS.gene62892:CDS | 35.0% | |
| ACTATTCATTGGGTTCAACA+AGG | + | chr8.1:22207991-22208010 | MS.gene62892:CDS | 35.0% | |
| AGACAAGCAGTTTATGTTCT+TGG | + | chr8.1:22208723-22208742 | MS.gene62892:CDS | 35.0% | |
| AGCAGTCCTCAATTTATACT+TGG | + | chr8.1:22207349-22207368 | MS.gene62892:CDS | 35.0% | |
| ATGGGGAATTCATTAAAGCT+CGG | + | chr8.1:22208286-22208305 | MS.gene62892:CDS | 35.0% | |
| ATTGGGATGCAACTATTCAT+TGG | + | chr8.1:22207980-22207999 | MS.gene62892:CDS | 35.0% | |
| CATAGCCAAAACATTCATCA+TGG | - | chr8.1:22207032-22207051 | None:intergenic | 35.0% | |
| CTGGTGAATGTGATTACAAA+TGG | + | chr8.1:22207482-22207501 | MS.gene62892:CDS | 35.0% | |
| GAACTGATCTCTATAGAAAG+TGG | + | chr8.1:22208334-22208353 | MS.gene62892:CDS | 35.0% | |
| GACCTTCCAAGTATAAATTG+AGG | - | chr8.1:22207358-22207377 | None:intergenic | 35.0% | |
| GTCCTCAATTTATACTTGGA+AGG | + | chr8.1:22207353-22207372 | MS.gene62892:CDS | 35.0% | |
| GTGGGACTAATATTGAAGAT+TGG | + | chr8.1:22208808-22208827 | MS.gene62892:CDS | 35.0% | |
| GTGTAGAACCTCCATATAAT+TGG | + | chr8.1:22208127-22208146 | MS.gene62892:CDS | 35.0% | |
| GTTTAATGCTTAAGCAGAAG+AGG | + | chr8.1:22208832-22208851 | MS.gene62892:CDS | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | + | chr8.1:22208421-22208440 | MS.gene62892:CDS | 35.0% | |
| TCAATCTTGCAAGGATTCAA+AGG | + | chr8.1:22208063-22208082 | MS.gene62892:CDS | 35.0% | |
| TCTGTTACGTGTTTGAATAC+TGG | + | chr8.1:22208675-22208694 | MS.gene62892:CDS | 35.0% | |
| TTAAAGTAAGTCCTTCAGCA+TGG | + | chr8.1:22208481-22208500 | MS.gene62892:CDS | 35.0% | |
| TTGGGATGCAACTATTCATT+GGG | + | chr8.1:22207981-22208000 | MS.gene62892:CDS | 35.0% | |
| ! | AGCATGGCCTATAAAAGTAT+TGG | + | chr8.1:22208497-22208516 | MS.gene62892:CDS | 35.0% |
| ! | AGGTGATGATGAAAGACAAT+TGG | + | chr8.1:22207962-22207981 | MS.gene62892:CDS | 35.0% |
| ! | GGTGATGATGAAAGACAATT+GGG | + | chr8.1:22207963-22207982 | MS.gene62892:CDS | 35.0% |
| ! | TTTTGTAGGACTTGGAAACT+CGG | + | chr8.1:22207853-22207872 | MS.gene62892:CDS | 35.0% |
| !! | GGTTTGTTGCTGTTAGATAT+AGG | + | chr8.1:22207575-22207594 | MS.gene62892:CDS | 35.0% |
| !! | TGGGATTTTGTGAGTTTTGT+AGG | + | chr8.1:22207839-22207858 | MS.gene62892:CDS | 35.0% |
| !! | TGTTTTTGCAAACTCAGCTA+GGG | - | chr8.1:22208421-22208440 | None:intergenic | 35.0% |
| !! | TTTGTGAGTTTTGTAGGACT+TGG | + | chr8.1:22207845-22207864 | MS.gene62892:CDS | 35.0% |
| !!! | CATGATGAATGTTTTGGCTA+TGG | + | chr8.1:22207030-22207049 | MS.gene62892:CDS | 35.0% |
| !!! | CTGGTGTTATCTATGAGTTT+TGG | + | chr8.1:22207101-22207120 | MS.gene62892:CDS | 35.0% |
| !!! | GAGAAAGTCCGATTAGTTTT+CGG | + | chr8.1:22207677-22207696 | MS.gene62892:CDS | 35.0% |
| !!! | GAGACTTTTTGAAGCAGTAA+CGG | + | chr8.1:22208599-22208618 | MS.gene62892:CDS | 35.0% |
| !!! | TTGTTTTTGCAAACTCAGCT+AGG | - | chr8.1:22208422-22208441 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGTGGAAGGGTAT+TGG | + | chr8.1:22207632-22207651 | MS.gene62892:CDS | 35.0% |
| AATCCCAAGATCCAACACAT+AGG | - | chr8.1:22207826-22207845 | None:intergenic | 40.0% | |
| ATAGTTCAAGTAGCTGCTGT+TGG | + | chr8.1:22207523-22207542 | MS.gene62892:CDS | 40.0% | |
| ATCCCAAGATCCAACACATA+GGG | - | chr8.1:22207825-22207844 | None:intergenic | 40.0% | |
| ATGGGGAGTGACCAATTATA+TGG | - | chr8.1:22208141-22208160 | None:intergenic | 40.0% | |
| ATGTCTGCAGATCTCATCAA+AGG | + | chr8.1:22206791-22206810 | MS.gene62892:CDS | 40.0% | |
| ATTTCAGCAAACCAATGCCA+TGG | + | chr8.1:22206723-22206742 | MS.gene62892:CDS | 40.0% | |
| CACCATGCAAAGGAAGAATT+CGG | - | chr8.1:22208110-22208129 | None:intergenic | 40.0% | |
| CATTAAAGCTCGGAAAACAG+CGG | + | chr8.1:22208296-22208315 | MS.gene62892:CDS | 40.0% | |
| GATATAGGTGTCCAAATGTG+AGG | + | chr8.1:22207590-22207609 | MS.gene62892:CDS | 40.0% | |
| GCGAGAAGAATCAAACTCAA+AGG | + | chr8.1:22207249-22207268 | MS.gene62892:CDS | 40.0% | |
| GCTAATTCTATGCCTTCTCT+TGG | + | chr8.1:22206986-22207005 | MS.gene62892:CDS | 40.0% | |
| GCTATGTAGATTCCTATCCA+TGG | - | chr8.1:22206743-22206762 | None:intergenic | 40.0% | |
| TAATCGGTGGTTTAGGAAGT+TGG | + | chr8.1:22207705-22207724 | MS.gene62892:CDS | 40.0% | |
| TACCCTATGTGTTGGATCTT+GGG | + | chr8.1:22207820-22207839 | MS.gene62892:CDS | 40.0% | |
| TAGATTCCTATCCATGGCAT+TGG | - | chr8.1:22206737-22206756 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | + | chr8.1:22207376-22207395 | MS.gene62892:CDS | 40.0% | |
| TCCAGTGAAGATAGTACAGA+GGG | - | chr8.1:22208867-22208886 | None:intergenic | 40.0% | |
| TTACCCTATGTGTTGGATCT+TGG | + | chr8.1:22207819-22207838 | MS.gene62892:CDS | 40.0% | |
| TTGCAAGGATTCAAAGGAGT+TGG | + | chr8.1:22208069-22208088 | MS.gene62892:CDS | 40.0% | |
| TTTGACGGAAACAGCGATTA+TGG | - | chr8.1:22206879-22206898 | None:intergenic | 40.0% | |
| ! | AATGCTTGCTAGTGTCACAA+TGG | - | chr8.1:22208160-22208179 | None:intergenic | 40.0% |
| ! | ACTTCCTAAACCACCGATTA+TGG | - | chr8.1:22207705-22207724 | None:intergenic | 40.0% |
| ! | ACTTTTATAGGCCATGCTGA+AGG | - | chr8.1:22208495-22208514 | None:intergenic | 40.0% |
| ! | AGCCATGATAGTGCAAATCA+TGG | - | chr8.1:22206969-22206988 | None:intergenic | 40.0% |
| ! | ATGCTTGCTAGTGTCACAAT+GGG | - | chr8.1:22208159-22208178 | None:intergenic | 40.0% |
| ! | TGCCATGATTTGCACTATCA+TGG | + | chr8.1:22206964-22206983 | MS.gene62892:CDS | 40.0% |
| !! | AAAGAGAGCATTTCCTAGAG+TGG | + | chr8.1:22208776-22208795 | MS.gene62892:CDS | 40.0% |
| !! | CATAGGAGTGTTGAGATCAA+CGG | - | chr8.1:22206906-22206925 | None:intergenic | 40.0% |
| AGCAAACCAATGCCATGGAT+AGG | + | chr8.1:22206728-22206747 | MS.gene62892:CDS | 45.0% | |
| CGGTTTATTCTGCATCTCGA+AGG | + | chr8.1:22207922-22207941 | MS.gene62892:CDS | 45.0% | |
| CTCCAGTGAAGATAGTACAG+AGG | - | chr8.1:22208868-22208887 | None:intergenic | 45.0% | |
| CTCTGTACTATCTTCACTGG+AGG | + | chr8.1:22208866-22208885 | MS.gene62892:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | + | chr8.1:22208105-22208124 | MS.gene62892:CDS | 45.0% | |
| GAGATCAACGGAGAGTTTGA+CGG | - | chr8.1:22206894-22206913 | None:intergenic | 45.0% | |
| GCAACAAACCATCTCAAAGC+AGG | - | chr8.1:22207565-22207584 | None:intergenic | 45.0% | |
| GCATCAGAACTCGCAAACTA+TGG | + | chr8.1:22206813-22206832 | MS.gene62892:CDS | 45.0% | |
| GGAAAACAGCGGAAATTGTG+TGG | + | chr8.1:22208307-22208326 | MS.gene62892:CDS | 45.0% | |
| GGAAACAGCGATTATGGTCA+AGG | - | chr8.1:22206873-22206892 | None:intergenic | 45.0% | |
| GGATCCATAATCGGTGGTTT+AGG | + | chr8.1:22207698-22207717 | MS.gene62892:CDS | 45.0% | |
| GGGAGTGACCAATTATATGG+AGG | - | chr8.1:22208138-22208157 | None:intergenic | 45.0% | |
| GGTGTCCAAATGTGAGGAAA+AGG | + | chr8.1:22207596-22207615 | MS.gene62892:CDS | 45.0% | |
| GTATTGGACTGATAGGCTAG+TGG | + | chr8.1:22207648-22207667 | MS.gene62892:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGAG+AGG | + | chr8.1:22207927-22207946 | MS.gene62892:CDS | 45.0% | |
| TCCCTCTGTACTATCTTCAC+TGG | + | chr8.1:22208863-22208882 | MS.gene62892:CDS | 45.0% | |
| TGGTCGGTTAAATTCTGCAC+TGG | + | chr8.1:22207463-22207482 | MS.gene62892:CDS | 45.0% | |
| TTCTGCGTTACACCAAGAGA+AGG | - | chr8.1:22207001-22207020 | None:intergenic | 45.0% | |
| ! | AAGTAGCTGCTGTTGGTGTT+GGG | + | chr8.1:22207530-22207549 | MS.gene62892:CDS | 45.0% |
| ! | CAGCTCCTTTTCCTCACATT+TGG | - | chr8.1:22207604-22207623 | None:intergenic | 45.0% |
| ! | GTTTTCGGATCCATAATCGG+TGG | + | chr8.1:22207692-22207711 | MS.gene62892:CDS | 45.0% |
| ! | TGCTTGCTAGTGTCACAATG+GGG | - | chr8.1:22208158-22208177 | None:intergenic | 45.0% |
| ! | TTTAGGATCAGGCACAAAGC+AGG | + | chr8.1:22207891-22207910 | MS.gene62892:CDS | 45.0% |
| !! | AGCGTTTCGAGTTTAGGATC+AGG | + | chr8.1:22207880-22207899 | MS.gene62892:CDS | 45.0% |
| !! | CTATTGCTCCTGCTTTGAGA+TGG | + | chr8.1:22207554-22207573 | MS.gene62892:CDS | 45.0% |
| !! | GGTTCTAGCGTTTCGAGTTT+AGG | + | chr8.1:22207874-22207893 | MS.gene62892:CDS | 45.0% |
| !! | TGGAAGGGTATTGGACTGAT+AGG | + | chr8.1:22207641-22207660 | MS.gene62892:CDS | 45.0% |
| ACAGCGGAAATTGTGTGGCT+TGG | + | chr8.1:22208312-22208331 | MS.gene62892:CDS | 50.0% | |
| CAAGTAGCTGCTGTTGGTGT+TGG | + | chr8.1:22207529-22207548 | MS.gene62892:CDS | 50.0% | |
| GCACAAAGCAGGATCTACGA+CGG | + | chr8.1:22207902-22207921 | MS.gene62892:CDS | 50.0% | |
| GCTTTGCTAGCTGATCATGC+CGG | - | chr8.1:22206934-22206953 | None:intergenic | 50.0% | |
| GGAGGTTCTACACCATGCAA+AGG | - | chr8.1:22208120-22208139 | None:intergenic | 50.0% | |
| TCAACACTCCTATGCCTCAC+CGG | + | chr8.1:22206912-22206931 | MS.gene62892:CDS | 50.0% | |
| TCTCGAAGGAGAGGAAGAGT+TGG | + | chr8.1:22207936-22207955 | MS.gene62892:CDS | 50.0% | |
| ! | AGGAGAGGAAGAGTTGGTTG+AGG | + | chr8.1:22207942-22207961 | MS.gene62892:CDS | 50.0% |
| ! | CTAGAGTGGATTTCTGCCGT+GGG | + | chr8.1:22208790-22208809 | MS.gene62892:CDS | 50.0% |
| CCACGGCAGAAATCCACTCT+AGG | - | chr8.1:22208792-22208811 | None:intergenic | 55.0% | |
| TGATCATGCCGGTGAGGCAT+AGG | - | chr8.1:22206923-22206942 | None:intergenic | 55.0% | |
| ! | CCTAGAGTGGATTTCTGCCG+TGG | + | chr8.1:22208789-22208808 | MS.gene62892:CDS | 55.0% |
| GCTAGCTGATCATGCCGGTG+AGG | - | chr8.1:22206929-22206948 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 22206677 | 22208947 | 22206677 | ID=MS.gene62892 |
| chr8.1 | mRNA | 22206677 | 22208947 | 22206677 | ID=MS.gene62892.t1;Parent=MS.gene62892 |
| chr8.1 | exon | 22206677 | 22208947 | 22206677 | ID=MS.gene62892.t1.exon1;Parent=MS.gene62892.t1 |
| chr8.1 | CDS | 22206677 | 22208947 | 22206677 | ID=cds.MS.gene62892.t1;Parent=MS.gene62892.t1 |
| Gene Sequence |
| Protein sequence |
