AlfalfaGEDB | MS.gene72868

M. sativa cultivar XinJiangDaYe / MS.gene72868

KEGG: K01904
GO: GO:0003674 GO:0003824
PFAM: PF00501.31 PF13193.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72868.t1	XP_003612659.1	93.2	555	38	0	1	555	1	555	2.40E-294	1020.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72868.t1	Q84P24	59.1	541	219	2	17	555	22	562	2.0e-180	633.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72868.t1	G7K877	93.2	555	38	0	1	555	1	555	1.8e-294	1020.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050584	MS.gene72868	0.807314	5.37E-50	-1.69E-46
MS.gene05143	MS.gene72868	0.810461	1.14E-50	-1.69E-46
MS.gene052142	MS.gene72868	0.803855	2.86E-49	-1.69E-46
MS.gene05456	MS.gene72868	0.83237	9.83E-56	-1.69E-46
MS.gene055359	MS.gene72868	0.809921	1.49E-50	-1.69E-46
MS.gene059006	MS.gene72868	0.829091	6.25E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene21861	MS.gene72868	PPI
MS.gene024782	MS.gene72868	PPI
MS.gene35476	MS.gene72868	PPI
MS.gene47076	MS.gene72868	PPI
MS.gene98283	MS.gene72868	PPI
MS.gene028660	MS.gene72868	PPI
MS.gene09440	MS.gene72868	PPI
MS.gene72868	MS.gene27109	PPI
MS.gene72868	MS.gene88935	PPI
MS.gene34290	MS.gene72868	PPI
MS.gene50103	MS.gene72868	PPI
MS.gene72868	MS.gene21765	PPI
MS.gene022444	MS.gene72868	PPI
MS.gene61077	MS.gene72868	PPI
MS.gene016573	MS.gene72868	PPI
MS.gene009614	MS.gene72868	PPI
MS.gene09107	MS.gene72868	PPI
MS.gene88460	MS.gene72868	PPI
MS.gene09098	MS.gene72868	PPI
MS.gene99857	MS.gene72868	PPI
MS.gene26216	MS.gene72868	PPI
MS.gene72868	MS.gene60078	PPI
MS.gene35477	MS.gene72868	PPI
MS.gene04193	MS.gene72868	PPI
MS.gene31229	MS.gene72868	PPI
MS.gene018428	MS.gene72868	PPI
MS.gene29781	MS.gene72868	PPI
MS.gene72868	MS.gene88987	PPI
MS.gene034275	MS.gene72868	PPI
MS.gene049797	MS.gene72868	PPI
MS.gene074158	MS.gene72868	PPI
MS.gene72868	MS.gene61755	PPI
MS.gene05651	MS.gene72868	PPI
MS.gene72868	MS.gene04301	PPI
MS.gene049798	MS.gene72868	PPI
MS.gene007715	MS.gene72868	PPI
MS.gene55438	MS.gene72868	PPI
MS.gene43857	MS.gene72868	PPI
MS.gene049799	MS.gene72868	PPI
MS.gene09104	MS.gene72868	PPI
MS.gene99100	MS.gene72868	PPI
MS.gene72868	MS.gene98148	PPI
MS.gene24088	MS.gene72868	PPI
MS.gene058103	MS.gene72868	PPI
MS.gene83513	MS.gene72868	PPI
MS.gene94953	MS.gene72868	PPI
MS.gene017279	MS.gene72868	PPI
MS.gene72868	MS.gene039385	PPI
MS.gene09153	MS.gene72868	PPI
MS.gene33554	MS.gene72868	PPI
MS.gene039386	MS.gene72868	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72868.t1	MTR_5g027480	93.153	555	38	0	1	555	1	555	0.0	1053
MS.gene72868.t1	MTR_5g027500	79.225	568	105	2	1	555	1	568	0.0	882
MS.gene72868.t1	MTR_4g077900	80.335	478	92	1	80	555	1	478	0.0	780
MS.gene72868.t1	MTR_1g026310	44.224	554	296	5	11	555	11	560	5.03e-156	457
MS.gene72868.t1	MTR_8g039720	44.092	567	293	9	5	555	1	559	8.25e-152	447
MS.gene72868.t1	MTR_1g090737	44.485	544	278	10	18	547	25	558	1.17e-142	424
MS.gene72868.t1	MTR_4g057730	42.301	539	294	9	18	547	4	534	2.00e-139	414
MS.gene72868.t1	MTR_2g095510	40.520	538	305	7	25	555	10	539	4.49e-136	406
MS.gene72868.t1	MTR_1g063120	39.162	549	303	10	20	547	6	544	8.34e-128	385
MS.gene72868.t1	MTR_3g088870	41.532	496	272	7	58	547	67	550	1.77e-127	385
MS.gene72868.t1	MTR_1g063110	38.899	545	310	8	18	547	4	540	9.47e-126	380
MS.gene72868.t1	MTR_3g088880	40.644	497	280	6	54	547	64	548	1.92e-124	377
MS.gene72868.t1	MTR_4g057730	41.772	474	259	9	18	482	4	469	8.85e-114	346
MS.gene72868.t1	MTR_1g073180	39.147	516	289	9	42	549	30	528	8.74e-109	336
MS.gene72868.t1	MTR_4g128337	39.000	500	287	10	58	547	49	540	1.37e-106	330
MS.gene72868.t1	MTR_2g105570	39.171	531	303	10	30	548	20	542	1.46e-106	330
MS.gene72868.t1	MTR_4g057730	41.189	454	250	9	18	462	4	449	2.75e-105	324
MS.gene72868.t1	MTR_4g005750	40.377	530	292	13	30	548	19	535	6.62e-102	318
MS.gene72868.t1	MTR_2g095510	39.101	445	256	7	25	462	10	446	8.60e-101	312
MS.gene72868.t1	MTR_5g007640	38.264	507	294	7	58	553	87	585	5.65e-100	314
MS.gene72868.t1	MTR_3g460770	34.312	545	326	8	26	555	14	541	1.78e-99	312
MS.gene72868.t1	MTR_1g073180	37.732	538	299	13	9	530	14	531	7.79e-98	307
MS.gene72868.t1	MTR_1g026470	38.228	395	231	5	11	396	11	401	1.23e-78	253
MS.gene72868.t1	MTR_1g026430	38.228	395	231	5	11	396	11	401	2.27e-78	253
MS.gene72868.t1	MTR_3g035130	30.041	486	320	9	68	545	32	505	2.13e-52	187
MS.gene72868.t1	MTR_5g076240	28.626	524	315	17	66	549	38	542	1.31e-44	166
MS.gene72868.t1	MTR_3g035130	29.773	440	289	9	68	499	32	459	1.80e-41	155
MS.gene72868.t1	MTR_1569s0010	25.720	521	335	11	68	549	22	529	9.05e-41	155
MS.gene72868.t1	MTR_4g011790	26.096	479	309	11	109	554	132	598	5.14e-38	148
MS.gene72868.t1	MTR_0803s0020	27.344	512	292	13	70	541	263	734	6.37e-38	150
MS.gene72868.t1	MTR_4g011790	25.820	488	308	13	109	554	132	607	2.83e-36	143
MS.gene72868.t1	MTR_2g030240	26.433	541	318	14	71	555	31	547	3.35e-36	142
MS.gene72868.t1	MTR_5g076220	28.342	374	230	10	196	548	186	542	1.19e-35	140
MS.gene72868.t1	MTR_4g011790	25.910	467	301	11	109	542	132	586	8.85e-35	139
MS.gene72868.t1	MTR_3g064420	26.554	531	325	18	64	548	36	547	1.37e-34	138
MS.gene72868.t1	MTR_5g008800	28.947	494	316	14	80	549	52	534	2.27e-34	137
MS.gene72868.t1	MTR_2g044180	30.328	366	226	12	201	548	107	461	1.50e-33	133
MS.gene72868.t1	MTR_2g044180	30.328	366	226	12	201	548	198	552	2.77e-33	134
MS.gene72868.t1	MTR_4g013210	27.543	403	251	11	182	554	54	445	4.78e-33	131
MS.gene72868.t1	MTR_0161s0050	27.660	376	230	12	196	548	188	544	7.95e-33	132
MS.gene72868.t1	MTR_5g008820	27.027	518	313	17	69	548	41	531	1.17e-32	132
MS.gene72868.t1	MTR_8g074040	27.451	510	305	20	80	549	94	578	1.93e-31	129
MS.gene72868.t1	MTR_4g121600	25.382	524	329	16	69	548	47	552	2.00e-31	128
MS.gene72868.t1	MTR_8g074040	28.346	381	238	13	185	549	99	460	9.85e-31	125
MS.gene72868.t1	MTR_5g076200	27.273	374	234	11	196	548	186	542	1.12e-30	126
MS.gene72868.t1	MTR_2g030240	27.889	398	232	10	197	555	72	453	5.15e-30	123
MS.gene72868.t1	MTR_8g074120	29.491	373	222	12	198	549	137	489	1.42e-29	122
MS.gene72868.t1	MTR_1g026350	39.860	143	86	0	11	153	11	153	9.11e-28	109
MS.gene72868.t1	MTR_4g013210	27.202	386	233	11	182	554	54	404	1.69e-27	115
MS.gene72868.t1	MTR_4g013210	25.441	397	226	9	182	554	206	556	6.67e-27	115
MS.gene72868.t1	MTR_5g023730	26.499	517	326	19	69	553	48	542	1.08e-26	114
MS.gene72868.t1	MTR_7g084850	24.373	558	358	16	43	555	186	724	3.49e-26	113
MS.gene72868.t1	MTR_4g013210	27.419	372	229	11	182	523	206	566	8.71e-26	111
MS.gene72868.t1	MTR_4g057755	55.556	72	32	0	411	482	46	117	4.93e-22	92.0
MS.gene72868.t1	MTR_1g104810	25.048	523	308	16	23	472	57	568	2.71e-21	98.6
MS.gene72868.t1	MTR_3g087980	24.897	486	275	16	68	475	106	579	1.73e-20	95.9
MS.gene72868.t1	MTR_1g030290	26.989	352	173	15	198	480	250	586	7.65e-20	94.0
MS.gene72868.t1	MTR_1g104810	27.778	324	177	10	195	472	189	501	1.05e-19	93.2
MS.gene72868.t1	MTR_8g099420	26.131	398	216	14	140	484	180	552	2.25e-18	89.4
MS.gene72868.t1	MTR_1054s0020	24.930	357	243	11	200	549	432	770	3.39e-18	89.0
MS.gene72868.t1	MTR_7g109830	24.008	529	306	18	37	484	36	549	4.44e-18	88.2
MS.gene72868.t1	MTR_2g098490	26.131	398	234	17	198	544	647	1035	2.03e-15	80.5
MS.gene72868.t1	MTR_4g066130	25.750	400	234	18	197	544	650	1038	2.83e-15	80.1
MS.gene72868.t1	MTR_8g083170	30.180	222	133	7	324	532	459	671	4.01e-15	79.0
MS.gene72868.t1	MTR_3g088890	50.000	64	32	0	457	520	10	73	1.06e-14	70.1
MS.gene72868.t1	MTR_3g084470	30.769	221	122	7	296	495	418	628	3.02e-13	73.2
MS.gene72868.t1	MTR_3g084450	30.808	198	114	7	315	495	233	424	8.27e-13	71.2
MS.gene72868.t1	MTR_3g084450	30.808	198	114	7	315	495	441	632	2.39e-12	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72868.t1	AT4G19010	58.867	547	220	3	10	551	12	558	0.0	649
MS.gene72868.t1	AT1G20510	44.403	536	285	5	18	547	8	536	2.07e-160	468
MS.gene72868.t1	AT1G20480	43.038	553	296	6	14	555	21	565	4.24e-151	445
MS.gene72868.t1	AT1G20500	42.162	555	301	8	11	555	6	550	3.17e-146	432
MS.gene72868.t1	AT4G05160	40.516	543	307	6	23	555	8	544	2.54e-139	414
MS.gene72868.t1	AT5G38120	41.049	553	302	9	6	547	3	542	2.02e-135	405
MS.gene72868.t1	AT5G63380	40.109	551	306	7	12	547	9	550	4.51e-135	404
MS.gene72868.t1	AT1G20510	43.100	471	255	5	18	482	8	471	5.99e-133	395
MS.gene72868.t1	AT1G20510	42.129	451	248	5	18	462	8	451	4.24e-122	368
MS.gene72868.t1	AT5G38120	40.000	525	291	9	6	519	3	514	1.67e-121	368
MS.gene72868.t1	AT3G21240	40.374	535	300	10	30	555	30	554	6.52e-112	344
MS.gene72868.t1	AT1G65060	41.331	496	282	7	58	548	66	557	3.85e-111	342
MS.gene72868.t1	AT5G38120	39.549	488	271	9	6	482	3	477	2.18e-109	335
MS.gene72868.t1	AT5G38120	39.549	488	271	9	6	482	3	477	2.18e-109	335
MS.gene72868.t1	AT1G51680	42.436	509	279	8	58	555	56	561	2.37e-109	338
MS.gene72868.t1	AT3G21230	39.089	527	305	9	40	553	43	566	7.82e-104	324
MS.gene72868.t1	AT1G62940	38.020	505	288	8	57	549	43	534	7.64e-98	308
MS.gene72868.t1	AT1G51680	42.072	473	260	8	58	519	56	525	3.41e-97	306
MS.gene72868.t1	AT3G21230	38.742	493	286	9	40	519	43	532	2.25e-92	293
MS.gene72868.t1	AT1G20490	37.731	432	249	8	11	431	6	428	1.60e-88	280
MS.gene72868.t1	AT1G20490	37.731	432	249	8	11	431	6	428	1.60e-88	280
MS.gene72868.t1	AT3G21240	38.793	464	265	10	30	484	30	483	3.58e-86	276
MS.gene72868.t1	AT3G21240	38.793	464	265	10	30	484	30	483	3.58e-86	276
MS.gene72868.t1	AT1G51680	40.411	438	247	8	58	484	56	490	4.46e-83	268
MS.gene72868.t1	AT3G21230	37.719	456	268	9	40	482	43	495	5.52e-80	259
MS.gene72868.t1	AT1G65060	39.078	412	242	7	58	464	66	473	1.99e-78	255
MS.gene72868.t1	AT3G48990	29.158	487	325	12	67	545	30	504	5.89e-49	177
MS.gene72868.t1	AT3G21230	33.075	387	243	9	40	413	43	426	2.64e-44	163
MS.gene72868.t1	AT1G77240	33.159	383	212	15	195	552	182	545	1.12e-40	155
MS.gene72868.t1	AT1G21530	26.825	548	339	21	41	549	19	543	1.25e-38	149
MS.gene72868.t1	AT5G16370	27.038	503	318	14	80	549	53	539	2.57e-38	148
MS.gene72868.t1	AT1G30520	27.514	527	307	16	77	549	42	547	4.23e-38	148
MS.gene72868.t1	AT1G30520	27.514	527	307	16	77	549	42	547	4.23e-38	148
MS.gene72868.t1	AT1G65890	26.316	532	325	18	66	549	38	550	5.24e-38	148
MS.gene72868.t1	AT1G21530	26.740	546	340	21	41	549	19	541	1.85e-37	146
MS.gene72868.t1	AT1G21540	27.061	558	335	23	41	552	19	550	6.41e-37	144
MS.gene72868.t1	AT1G65880	27.186	526	329	17	66	549	38	551	1.10e-36	144
MS.gene72868.t1	AT1G66120	27.048	525	323	17	66	549	38	543	1.48e-33	135
MS.gene72868.t1	AT1G75960	29.919	371	227	13	196	548	183	538	2.52e-33	134
MS.gene72868.t1	AT5G16340	27.075	506	314	19	80	549	53	539	4.53e-33	133
MS.gene72868.t1	AT3G16910	28.756	386	248	11	181	549	181	556	1.45e-31	129
MS.gene72868.t1	AT1G20560	27.075	506	314	16	80	549	54	540	6.49e-31	127
MS.gene72868.t1	AT3G16170	25.051	487	298	16	109	554	147	607	2.59e-30	125
MS.gene72868.t1	AT1G20560	30.163	368	226	12	198	549	110	462	4.62e-30	123
MS.gene72868.t1	AT1G30520	26.136	440	273	13	77	482	42	463	1.66e-29	122
MS.gene72868.t1	AT1G30520	26.136	440	273	13	77	482	42	463	1.66e-29	122
MS.gene72868.t1	AT1G76290	26.946	501	315	16	80	549	52	532	2.27e-29	122
MS.gene72868.t1	AT5G36880	24.953	529	351	13	67	555	197	719	5.08e-29	122
MS.gene72868.t1	AT5G36880	24.953	529	351	13	67	555	147	669	5.94e-29	122
MS.gene72868.t1	AT5G36880	24.953	529	351	13	67	555	147	669	5.94e-29	122
MS.gene72868.t1	AT5G36880	24.953	529	351	13	67	555	147	669	5.94e-29	122
MS.gene72868.t1	AT5G36880	24.953	529	351	13	67	555	147	669	5.94e-29	122
MS.gene72868.t1	AT2G17650	28.191	376	228	14	196	549	240	595	3.14e-27	116
MS.gene72868.t1	AT1G68270	24.053	528	310	18	66	548	38	519	3.31e-26	112
MS.gene72868.t1	AT5G27600	26.616	526	292	17	23	470	60	569	8.72e-25	109
MS.gene72868.t1	AT1G49430	25.524	525	304	21	36	484	40	553	1.61e-22	102
MS.gene72868.t1	AT5G36880	24.837	459	302	13	67	488	147	599	2.73e-22	101
MS.gene72868.t1	AT1G64400	24.565	517	295	19	21	456	21	523	1.00e-21	99.8
MS.gene72868.t1	AT1G77590	23.975	488	288	15	68	482	107	584	5.25e-19	91.3
MS.gene72868.t1	AT3G05970	25.047	535	283	18	26	470	63	569	1.36e-18	90.1
MS.gene72868.t1	AT1G77590	26.225	347	186	12	198	482	100	438	8.76e-18	87.0
MS.gene72868.t1	AT3G23790	29.070	172	104	5	335	493	465	631	4.96e-11	65.9
MS.gene72868.t1	AT2G47240	31.548	168	109	5	320	484	326	490	6.10e-11	65.5
MS.gene72868.t1	AT2G47240	31.548	168	109	5	320	484	385	549	6.16e-11	65.9
MS.gene72868.t1	AT2G47240	31.548	168	109	5	320	484	385	549	6.16e-11	65.9
MS.gene72868.t1	AT2G47240	31.548	168	109	5	320	484	385	549	6.16e-11	65.9

Find 119 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCCCTTATTGATTCCTCTTC+TGG	0.119793	5.1:-17977621	MS.gene72868:CDS
GGCTTCTGGTCTTCATAAAA+TGG	0.204210	5.1:-17977553	MS.gene72868:CDS
ATGGGATAGTAAATTGAATT+TGG	0.204514	5.1:+17977495	None:intergenic
TTGACATTGATGAGACTATT+AGG	0.209216	5.1:-17976960	MS.gene72868:CDS
TATCAAATACAAGGGCTTTC+AGG	0.229499	5.1:-17976056	MS.gene72868:intron
TATTGCCATGGTTGAGCTTT+TGG	0.243376	5.1:-17977127	MS.gene72868:CDS
TACTATCCCATTGTACTATT+AGG	0.254485	5.1:-17977483	MS.gene72868:CDS
CTTAGGATACTTGAATAATA+AGG	0.261353	5.1:-17976185	MS.gene72868:intron
CCCTTATTGATTCCTCTTCT+GGG	0.272214	5.1:-17977620	MS.gene72868:CDS
TTGCCGATGTTCCATTTATA+TGG	0.273927	5.1:-17977045	MS.gene72868:CDS
ATAGTGGATGTCGCCGTTAC+AGG	0.280831	5.1:-17975870	MS.gene72868:CDS
AGAGAGATAAACCATATAAA+TGG	0.302429	5.1:+17977034	None:intergenic
ACCTGTATAAAATCAACATT+AGG	0.307157	5.1:+17976766	None:intergenic
ATATCATCACTCACCCTTCT+TGG	0.313940	5.1:-17977758	MS.gene72868:CDS
GCGAAGGCAAAGGGTGTAAA+TGG	0.324668	5.1:-17976874	MS.gene72868:CDS
TGCTACGGGATTATTGTCAT+TGG	0.327188	5.1:-17977010	MS.gene72868:CDS
TGGAGGCAAAAGTGGTATAT+TGG	0.338544	5.1:-17976527	MS.gene72868:CDS
TTAGTCAAATCAATGGCTTC+TGG	0.343881	5.1:-17977567	MS.gene72868:CDS
AGCAGTTTCTGAGTTGCTTT+CGG	0.356180	5.1:+17975464	None:intergenic
ACGGCGACATCCACTATTTC+AGG	0.369334	5.1:+17975876	None:intergenic
TGCATGCCTTAGAGTTTAGA+AGG	0.372200	5.1:+17975439	None:intergenic
ATGACTGAGTCGGGTGCATT+AGG	0.374967	5.1:-17976615	MS.gene72868:CDS
CTCCCCAGCTTCTTCATCCT+TGG	0.375919	5.1:+17975752	None:intergenic
CAGGCAGAAGTGGTGAGCTT+TGG	0.376467	5.1:-17976482	MS.gene72868:CDS
TGACATTGATGAGACTATTA+GGG	0.379738	5.1:-17976959	MS.gene72868:CDS
AACGATACAACGTCGAGAAA+AGG	0.386540	5.1:+17977675	None:intergenic
TGCTTGCCTTCTAAACTCTA+AGG	0.391570	5.1:-17975445	None:intergenic
GGAGATTCCAGTGGCATTTG+TGG	0.394931	5.1:-17975733	MS.gene72868:CDS
TCCCAGAAGAGGAATCAATA+AGG	0.395051	5.1:+17977619	None:intergenic
ACTTTGCGAACCTTCTTGAA+TGG	0.396762	5.1:+17975532	None:intergenic
GTGTATACTATTGTAAATTC+CGG	0.412626	5.1:+17977722	None:intergenic
GCTACGGGATTATTGTCATT+GGG	0.419178	5.1:-17977009	MS.gene72868:CDS
TGGTTTATCTCTCTTTGCTA+CGG	0.427906	5.1:-17977025	MS.gene72868:CDS
AAACAAAGTTACCAGAAATC+AGG	0.431755	5.1:+17977253	None:intergenic
GTTAAGAAATTAGAACCATT+AGG	0.435854	5.1:-17977345	MS.gene72868:CDS
TAACAACTTTGAGTAAGAAA+TGG	0.436153	5.1:+17977593	None:intergenic
AAAGATGGTTGGCTACATAC+TGG	0.442873	5.1:-17976139	MS.gene72868:CDS
GCTGTCAATGCCGACAATAT+CGG	0.443469	5.1:+17976895	None:intergenic
GGTTTATCTCTCTTTGCTAC+GGG	0.445435	5.1:-17977024	MS.gene72868:CDS
GAAGCCATTGATTTGACTAA+AGG	0.445775	5.1:+17977570	None:intergenic
CAAAGCTCACCACTTCTGCC+TGG	0.447396	5.1:+17976483	None:intergenic
TATCGACTTCGTTGCTAAGC+AGG	0.451419	5.1:-17975673	MS.gene72868:intron
TCTTGTTCCACCGATATTGT+CGG	0.455719	5.1:-17976905	MS.gene72868:CDS
GTTACCTTTAGTCAAATCAA+TGG	0.458910	5.1:-17977574	MS.gene72868:CDS
AAAGCTCACCACTTCTGCCT+GGG	0.459009	5.1:+17976484	None:intergenic
ACGAAGTCGATAACATCCTT+TGG	0.459798	5.1:+17975684	None:intergenic
GCATTTGTGGTCAAGAAAGT+TGG	0.466162	5.1:-17975720	MS.gene72868:CDS
ACGATACAACGTCGAGAAAA+GGG	0.466770	5.1:+17977676	None:intergenic
TTTCGCAACTATTCTTCACT+AGG	0.467126	5.1:-17976567	MS.gene72868:CDS
CCTGTATAAAATCAACATTA+GGG	0.467794	5.1:+17976767	None:intergenic
TTCTGTGCCAGAAAATGAAA+AGG	0.468038	5.1:-17977310	MS.gene72868:CDS
GCTTCTGGTCTTCATAAAAT+GGG	0.474868	5.1:-17977552	MS.gene72868:CDS
AATCAACATTAGGGAGAGCT+TGG	0.474883	5.1:+17976776	None:intergenic
ATAACACCTAATAGTACAAT+GGG	0.478275	5.1:+17977477	None:intergenic
TTCTTGACCACAAATGCCAC+TGG	0.484108	5.1:+17975726	None:intergenic
AAAGTGGTATATTGGAATAG+TGG	0.491834	5.1:-17976519	MS.gene72868:CDS
ATTTCATCAACACTACTAAG+AGG	0.496577	5.1:+17977423	None:intergenic
GAAAGAATTTATCAAATACA+AGG	0.497893	5.1:-17976065	MS.gene72868:CDS
GGGTCGGTCGGAAGGCTCCT+AGG	0.498932	5.1:+17977696	None:intergenic
CACAGACCTTGGAATCTTGT+CGG	0.500104	5.1:+17975501	None:intergenic
TGTTGATGAAATTCGTAAGC+AGG	0.500410	5.1:-17977412	MS.gene72868:CDS
GTTCTTCAATCGTTGTAATG+AGG	0.501221	5.1:-17976987	MS.gene72868:CDS
CCCAGAAGAGGAATCAATAA+GGG	0.505561	5.1:+17977620	None:intergenic
GAAATAATAGGAATGCCTAA+TGG	0.507899	5.1:+17977330	None:intergenic
ATCTTCCCAGTCACAGACCT+TGG	0.509926	5.1:+17975490	None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG	0.511530	5.1:-17976848	MS.gene72868:CDS
AACACAGCTTCTAAATCAGC+AGG	0.514041	5.1:+17975909	None:intergenic
GTTTATGGAATGACTGAGTC+GGG	0.516171	5.1:-17976624	MS.gene72868:CDS
GGTTTATGGAATGACTGAGT+CGG	0.521041	5.1:-17976625	MS.gene72868:CDS
AGTGGTGAGCTTTGGTTGAG+AGG	0.521413	5.1:-17976474	MS.gene72868:CDS
AGTGCCAAGGATGAAGAAGC+TGG	0.523191	5.1:-17975756	MS.gene72868:CDS
AAGATTCCAAGGTCTGTGAC+TGG	0.524838	5.1:-17975496	MS.gene72868:CDS
ATGTCGACAATTGATAAAGA+TGG	0.526979	5.1:-17976154	MS.gene72868:CDS
TCCAAACATGGAGGCAAAAG+TGG	0.536470	5.1:-17976535	MS.gene72868:CDS
ACAATAGTATACACTCTCCT+AGG	0.538812	5.1:-17977713	MS.gene72868:CDS
TCATAGAAATCTTATTGCCA+TGG	0.541662	5.1:-17977139	MS.gene72868:CDS
TTCGCAACTATTCTTCACTA+GGG	0.541708	5.1:-17976566	MS.gene72868:CDS
GCAGGTTGCTCCATTCAAGA+AGG	0.544629	5.1:-17975542	MS.gene72868:intron
CGAGAAAAGGGTCGGTCGGA+AGG	0.547817	5.1:+17977688	None:intergenic
TAGTGGATGTCGCCGTTACA+GGG	0.551826	5.1:-17975869	MS.gene72868:intron
GTGCCAAGGATGAAGAAGCT+GGG	0.553492	5.1:-17975755	MS.gene72868:CDS
CATAACACCTAATAGTACAA+TGG	0.557647	5.1:+17977476	None:intergenic
TGGAAGTGTACTTTCTCCAA+AGG	0.559244	5.1:-17975700	MS.gene72868:CDS
GCATTGACAGCGAAGGCAAA+GGG	0.561700	5.1:-17976883	MS.gene72868:CDS
ACACTACTAAGAGGATTCAA+TGG	0.565007	5.1:+17977432	None:intergenic
GGCATTGACAGCGAAGGCAA+AGG	0.570107	5.1:-17976884	MS.gene72868:CDS
ATTTGATAAATTCTTTCAAG+CGG	0.572308	5.1:+17976071	None:intergenic
AGAGGTCCTTCAATTATGAA+AGG	0.572900	5.1:-17976456	MS.gene72868:intron
AAGCTCACCACTTCTGCCTG+GGG	0.573330	5.1:+17976485	None:intergenic
CGACAATTGATAAAGATGGT+TGG	0.573781	5.1:-17976150	MS.gene72868:CDS
AGATTCCAAGGTCTGTGACT+GGG	0.575854	5.1:-17975495	MS.gene72868:CDS
AAAGAATTTATCAAATACAA+GGG	0.580755	5.1:-17976064	MS.gene72868:CDS
CATAAAATGGGAGTTTCACA+AGG	0.583635	5.1:-17977540	MS.gene72868:CDS
CTATTAGGTGTTATGTACCT+AGG	0.587403	5.1:-17977468	MS.gene72868:CDS
ATTCAAGAAGGTTCGCAAAG+TGG	0.594840	5.1:-17975530	MS.gene72868:CDS
AAACCATATAAATGGAACAT+CGG	0.598356	5.1:+17977042	None:intergenic
AGAAATGGAAGTCCCAGAAG+AGG	0.600253	5.1:+17977608	None:intergenic
AGGGCTAAAACCCCATCATG+AGG	0.601023	5.1:+17977639	None:intergenic
TTCATATACTTACCCTGTAA+CGG	0.602675	5.1:+17975857	None:intergenic
TTGCAGAGTTTGAGACAGGT+CGG	0.607467	5.1:-17976844	MS.gene72868:CDS
AGTTTCTGAGTTGCTTTCGG+AGG	0.613327	5.1:+17975467	None:intergenic
AGGGTTGTTAGCTCCAAACA+TGG	0.614345	5.1:-17976547	MS.gene72868:CDS
GGTACTACAGGTGTGAGCAA+AGG	0.618393	5.1:-17977174	MS.gene72868:CDS
TGCCAAGGATGAAGAAGCTG+GGG	0.626607	5.1:-17975754	MS.gene72868:CDS
TCGGGTGCATTAGGAGCATG+CGG	0.630001	5.1:-17976606	MS.gene72868:CDS
GTCAATGCCGACAATATCGG+TGG	0.636107	5.1:+17976898	None:intergenic
AGCTCACCACTTCTGCCTGG+GGG	0.642781	5.1:+17976486	None:intergenic
TCTTCACCGACAAGATTCCA+AGG	0.652098	5.1:-17975507	MS.gene72868:CDS
GGGCTAAAACCCCATCATGA+GGG	0.653343	5.1:+17977640	None:intergenic
CGTAAGCAGGTTAATGACTG+TGG	0.656452	5.1:-17977399	MS.gene72868:CDS
ACGTCGAGAAAAGGGTCGGT+CGG	0.657613	5.1:+17977684	None:intergenic
ATTGTCGGCATTGACAGCGA+AGG	0.665271	5.1:-17976890	MS.gene72868:CDS
ACAGCTTCTAAATCAGCAGG+AGG	0.675381	5.1:+17975912	None:intergenic
CCTCGCCAAAAGCTCAACCA+TGG	0.675519	5.1:+17977122	None:intergenic
TTGGAAGTAGAAGCAAAACA+AGG	0.677547	5.1:+17977514	None:intergenic
TACAACGTCGAGAAAAGGGT+CGG	0.686772	5.1:+17977680	None:intergenic
ATGGTGTAACAACAGCACCT+AGG	0.700872	5.1:+17977451	None:intergenic
AGAAGCTGGGGAGATTCCAG+TGG	0.713242	5.1:-17975742	MS.gene72868:CDS
GTTGTTAGCTCCAAACATGG+AGG	0.741487	5.1:-17976544	MS.gene72868:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGAATTTATCAAATACAA+GGG	-	chr5.1:17977175-17977194	MS.gene72868:CDS	15.0%
!!	GTTTGATTAATAATTTCAAT+TGG	+	chr5.1:17977020-17977039	None:intergenic	15.0%
!!	TTATATTTAAATGTCTAAAG+AGG	+	chr5.1:17977433-17977452	None:intergenic	15.0%
!!!	ATGTAAAATTGTTTCTTTTT+AGG	-	chr5.1:17976593-17976612	MS.gene72868:CDS	15.0%
!!	AAACAACATTATTTGAATGA+TGG	+	chr5.1:17976547-17976566	None:intergenic	20.0%
!!	ATTTGATAAATTCTTTCAAG+CGG	+	chr5.1:17977171-17977190	None:intergenic	20.0%
!!	GAAAGAATTTATCAAATACA+AGG	-	chr5.1:17977174-17977193	MS.gene72868:CDS	20.0%
!!	TAAATACTAAAAGGATAACA+TGG	-	chr5.1:17976845-17976864	MS.gene72868:CDS	20.0%
!!!	AACTTTTTCCTTAATTTCTT+AGG	-	chr5.1:17977037-17977056	MS.gene72868:CDS	20.0%
!!!	AATAAGACTATTTTATTCTG+AGG	+	chr5.1:17976504-17976523	None:intergenic	20.0%
!!!	AATTTTAACCCTTTTTTTCT+TGG	-	chr5.1:17977675-17977694	MS.gene72868:CDS	20.0%
!!!	ATTGTTTATTTTGATCAAGA+TGG	-	chr5.1:17977127-17977146	MS.gene72868:CDS	20.0%
!!!	ATTGTTTCTTTTTAGGTTTA+TGG	-	chr5.1:17976600-17976619	MS.gene72868:CDS	20.0%
!!!	TCTAATTTCTTAACATTTTC+AGG	+	chr5.1:17975888-17975907	None:intergenic	20.0%
!!!	TGTTTTCCTAGATTTTTTTA+AGG	-	chr5.1:17976562-17976581	MS.gene72868:CDS	20.0%
!!!	TTTTTACCTTTCATAATTGA+AGG	+	chr5.1:17976792-17976811	None:intergenic	20.0%
!	AAACCATATAAATGGAACAT+CGG	+	chr5.1:17976200-17976219	None:intergenic	25.0%
!	ACCTGTATAAAATCAACATT+AGG	+	chr5.1:17976476-17976495	None:intergenic	25.0%
!	ACTTGAATCAATGTTAGTAT+TGG	-	chr5.1:17977641-17977660	MS.gene72868:CDS	25.0%
!	AGAGAGATAAACCATATAAA+TGG	+	chr5.1:17976208-17976227	None:intergenic	25.0%
!	AGGATAACATGGTTATATAA+AGG	-	chr5.1:17976856-17976875	MS.gene72868:CDS	25.0%
!	ATAACACCTAATAGTACAAT+GGG	+	chr5.1:17975765-17975784	None:intergenic	25.0%
!	ATGGGATAGTAAATTGAATT+TGG	+	chr5.1:17975747-17975766	None:intergenic	25.0%
!	CCTGTATAAAATCAACATTA+GGG	+	chr5.1:17976475-17976494	None:intergenic	25.0%
!	CTTAGGATACTTGAATAATA+AGG	-	chr5.1:17977054-17977073	MS.gene72868:CDS	25.0%
!	GTGTATACTATTGTAAATTC+CGG	+	chr5.1:17975520-17975539	None:intergenic	25.0%
!	GTTAAGAAATTAGAACCATT+AGG	-	chr5.1:17975894-17975913	MS.gene72868:CDS	25.0%
!	TAACAACTTTGAGTAAGAAA+TGG	+	chr5.1:17975649-17975668	None:intergenic	25.0%
!	TCAAGTATCCTAAGAAATTA+AGG	+	chr5.1:17977048-17977067	None:intergenic	25.0%
!!	AATCAATGTTAGTATTGGAA+TGG	-	chr5.1:17977646-17977665	MS.gene72868:CDS	25.0%
!!	TGTTTAATAACCAGATTTTG+AGG	+	chr5.1:17976014-17976033	None:intergenic	25.0%
!!	TTTATAGCTTTTGTGCTTAA+AGG	+	chr5.1:17976434-17976453	None:intergenic	25.0%
!!!	TGTTTTTTTAACCTGATTTC+TGG	-	chr5.1:17975975-17975994	MS.gene72868:intron	25.0%
	AAACAAAGTTACCAGAAATC+AGG	+	chr5.1:17975989-17976008	None:intergenic	30.0%
	AAAGTGGTATATTGGAATAG+TGG	-	chr5.1:17976720-17976739	MS.gene72868:intron	30.0%
	AATCAATCTCATGCTAATGT+AGG	+	chr5.1:17976907-17976926	None:intergenic	30.0%
	ATGTCGACAATTGATAAAGA+TGG	-	chr5.1:17977085-17977104	MS.gene72868:CDS	30.0%
	ATTTCATCAACACTACTAAG+AGG	+	chr5.1:17975819-17975838	None:intergenic	30.0%
	CATAACACCTAATAGTACAA+TGG	+	chr5.1:17975766-17975785	None:intergenic	30.0%
	GAAATAATAGGAATGCCTAA+TGG	+	chr5.1:17975912-17975931	None:intergenic	30.0%
	GCACATCCTTAAAAAAATCT+AGG	+	chr5.1:17976571-17976590	None:intergenic	30.0%
	GGAAAATGATGAAACACTTA+AGG	+	chr5.1:17977456-17977475	None:intergenic	30.0%
	GTTACCTTTAGTCAAATCAA+TGG	-	chr5.1:17975665-17975684	MS.gene72868:intron	30.0%
	TACTATCCCATTGTACTATT+AGG	-	chr5.1:17975756-17975775	MS.gene72868:CDS	30.0%
	TCATAGAAATCTTATTGCCA+TGG	-	chr5.1:17976100-17976119	MS.gene72868:CDS	30.0%
	TGACATTGATGAGACTATTA+GGG	-	chr5.1:17976280-17976299	MS.gene72868:intron	30.0%
	TTCATATACTTACCCTGTAA+CGG	+	chr5.1:17977385-17977404	None:intergenic	30.0%
	TTGACATTGATGAGACTATT+AGG	-	chr5.1:17976279-17976298	MS.gene72868:intron	30.0%
!	AACAGCTAGATACACATTTT+TGG	+	chr5.1:17976174-17976193	None:intergenic	30.0%
!	AATTTTGCATCCTGAAATAG+TGG	-	chr5.1:17977353-17977372	MS.gene72868:CDS	30.0%
!	ATCGAATCCTTTTCATTTTC+TGG	+	chr5.1:17975939-17975958	None:intergenic	30.0%
!	CTATTGTAAATTCCGGTTTT+TGG	+	chr5.1:17975513-17975532	None:intergenic	30.0%
!!	TAAAGGTTTTGTCTATTGTG+TGG	-	chr5.1:17976873-17976892	MS.gene72868:CDS	30.0%
!!	TTTTCTGGCACAGAAATAAT+AGG	+	chr5.1:17975924-17975943	None:intergenic	30.0%
!!!	CCCTAATGTTGATTTTATAC+AGG	-	chr5.1:17976472-17976491	MS.gene72868:CDS	30.0%
	AATTGGAATAGCAACAAGAC+AGG	+	chr5.1:17977003-17977022	None:intergenic	35.0%
	ACAATAGTATACACTCTCCT+AGG	-	chr5.1:17975526-17975545	MS.gene72868:CDS	35.0%
	ACACTACTAAGAGGATTCAA+TGG	+	chr5.1:17975810-17975829	None:intergenic	35.0%
	AGAGGTCCTTCAATTATGAA+AGG	-	chr5.1:17976783-17976802	MS.gene72868:CDS	35.0%
	CATAAAATGGGAGTTTCACA+AGG	-	chr5.1:17975699-17975718	MS.gene72868:CDS	35.0%
	CGACAATTGATAAAGATGGT+TGG	-	chr5.1:17977089-17977108	MS.gene72868:CDS	35.0%
	GTTCTTCAATCGTTGTAATG+AGG	-	chr5.1:17976252-17976271	MS.gene72868:intron	35.0%
	TATCAAATACAAGGGCTTTC+AGG	-	chr5.1:17977183-17977202	MS.gene72868:CDS	35.0%
	TGGTTTATCTCTCTTTGCTA+CGG	-	chr5.1:17976214-17976233	MS.gene72868:intron	35.0%
	TTAGTCAAATCAATGGCTTC+TGG	-	chr5.1:17975672-17975691	MS.gene72868:intron	35.0%
	TTCGCAACTATTCTTCACTA+GGG	-	chr5.1:17976673-17976692	MS.gene72868:intron	35.0%
	TTCTGTGCCAGAAAATGAAA+AGG	-	chr5.1:17975929-17975948	MS.gene72868:intron	35.0%
	TTGCCGATGTTCCATTTATA+TGG	-	chr5.1:17976194-17976213	MS.gene72868:intron	35.0%
	TTGGAAGTAGAAGCAAAACA+AGG	+	chr5.1:17975728-17975747	None:intergenic	35.0%
	TTTCGCAACTATTCTTCACT+AGG	-	chr5.1:17976672-17976691	MS.gene72868:intron	35.0%
!	CTATTAGGTGTTATGTACCT+AGG	-	chr5.1:17975771-17975790	MS.gene72868:intron	35.0%
!	GCTGCTATATTGTTTTCTTC+TGG	-	chr5.1:17976044-17976063	MS.gene72868:intron	35.0%
!	GCTTCTGGTCTTCATAAAAT+GGG	-	chr5.1:17975687-17975706	MS.gene72868:CDS	35.0%
!	TGTTGATGAAATTCGTAAGC+AGG	-	chr5.1:17975827-17975846	MS.gene72868:intron	35.0%
!	TTGTTTTCTTCTGGTACTAC+AGG	-	chr5.1:17976053-17976072	MS.gene72868:intron	35.0%
!	TTTTCCATATATCAGTGCCA+AGG	-	chr5.1:17977470-17977489	MS.gene72868:CDS	35.0%
!!	GAAGCCATTGATTTGACTAA+AGG	+	chr5.1:17975672-17975691	None:intergenic	35.0%
!!	TTTTTGGTGAGTACCAAGAA+GGG	+	chr5.1:17975497-17975516	None:intergenic	35.0%
!!!	ATTTTTTCTCACCCTCATGA+TGG	-	chr5.1:17975588-17975607	MS.gene72868:intron	35.0%
!!!	CTTTGTTTTGCCTCAAAATC+TGG	-	chr5.1:17976001-17976020	MS.gene72868:intron	35.0%
!!!	TTAACCCTTTTTTTCTTGGC+AGG	-	chr5.1:17977679-17977698	MS.gene72868:CDS	35.0%
!!!	TTTTTTCTCACCCTCATGAT+GGG	-	chr5.1:17975589-17975608	MS.gene72868:intron	35.0%
	AACACAGCTTCTAAATCAGC+AGG	+	chr5.1:17977333-17977352	None:intergenic	40.0%
	AACGATACAACGTCGAGAAA+AGG	+	chr5.1:17975567-17975586	None:intergenic	40.0%
	AATCAACATTAGGGAGAGCT+TGG	+	chr5.1:17976466-17976485	None:intergenic	40.0%
	ACGAAGTCGATAACATCCTT+TGG	+	chr5.1:17977558-17977577	None:intergenic	40.0%
	ACGATACAACGTCGAGAAAA+GGG	+	chr5.1:17975566-17975585	None:intergenic	40.0%
	ACTTTGCGAACCTTCTTGAA+TGG	+	chr5.1:17977710-17977729	None:intergenic	40.0%
	AGCAACCTGCCAAGAAAAAA+AGG	+	chr5.1:17977687-17977706	None:intergenic	40.0%
	ATATCATCACTCACCCTTCT+TGG	-	chr5.1:17975481-17975500	MS.gene72868:CDS	40.0%
	ATTCAAGAAGGTTCGCAAAG+TGG	-	chr5.1:17977709-17977728	MS.gene72868:CDS	40.0%
	CCCAGAAGAGGAATCAATAA+GGG	+	chr5.1:17975622-17975641	None:intergenic	40.0%
	GCAACCTGCCAAGAAAAAAA+GGG	+	chr5.1:17977686-17977705	None:intergenic	40.0%
	GCATTTGTGGTCAAGAAAGT+TGG	-	chr5.1:17977519-17977538	MS.gene72868:CDS	40.0%
	GCTACGGGATTATTGTCATT+GGG	-	chr5.1:17976230-17976249	MS.gene72868:intron	40.0%
	GGTTTATCTCTCTTTGCTAC+GGG	-	chr5.1:17976215-17976234	MS.gene72868:intron	40.0%
	GGTTTATGGAATGACTGAGT+CGG	-	chr5.1:17976614-17976633	MS.gene72868:CDS	40.0%
	GTTTATGGAATGACTGAGTC+GGG	-	chr5.1:17976615-17976634	MS.gene72868:CDS	40.0%
	TCCCAGAAGAGGAATCAATA+AGG	+	chr5.1:17975623-17975642	None:intergenic	40.0%
	TCTTGGTACTCACCAAAAAC+CGG	-	chr5.1:17975498-17975517	MS.gene72868:CDS	40.0%
	TCTTGTTCCACCGATATTGT+CGG	-	chr5.1:17976334-17976353	MS.gene72868:intron	40.0%
	TGCTACGGGATTATTGTCAT+TGG	-	chr5.1:17976229-17976248	MS.gene72868:intron	40.0%
	TGGAGGCAAAAGTGGTATAT+TGG	-	chr5.1:17976712-17976731	MS.gene72868:intron	40.0%
!	AAAGATGGTTGGCTACATAC+TGG	-	chr5.1:17977100-17977119	MS.gene72868:CDS	40.0%
!	AGCAGTTTCTGAGTTGCTTT+CGG	+	chr5.1:17977778-17977797	None:intergenic	40.0%
!	GGCTTCTGGTCTTCATAAAA+TGG	-	chr5.1:17975686-17975705	MS.gene72868:CDS	40.0%
!	GGGTGAGTGATGATATTTTG+TGG	+	chr5.1:17975477-17975496	None:intergenic	40.0%
!	TAAGTTGCAGAGTTTGAGAC+AGG	-	chr5.1:17976391-17976410	MS.gene72868:intron	40.0%
!	TATTGCCATGGTTGAGCTTT+TGG	-	chr5.1:17976112-17976131	MS.gene72868:CDS	40.0%
!	TGGAAGTGTACTTTCTCCAA+AGG	-	chr5.1:17977539-17977558	MS.gene72868:CDS	40.0%
!	TTTTTCTCACCCTCATGATG+GGG	-	chr5.1:17975590-17975609	MS.gene72868:intron	40.0%
!!	CCCTTATTGATTCCTCTTCT+GGG	-	chr5.1:17975619-17975638	MS.gene72868:intron	40.0%
!!	TCATCCTTGGCACTGATATA+TGG	+	chr5.1:17977477-17977496	None:intergenic	40.0%
!!!	GTTTTTGGTGAGTACCAAGA+AGG	+	chr5.1:17975498-17975517	None:intergenic	40.0%
	AAGATTCCAAGGTCTGTGAC+TGG	-	chr5.1:17977743-17977762	MS.gene72868:CDS	45.0%
	ACAGCTTCTAAATCAGCAGG+AGG	+	chr5.1:17977330-17977349	None:intergenic	45.0%
	ACAGGCAGAAAAGGTTCAAG+TGG	+	chr5.1:17976985-17977004	None:intergenic	45.0%
	AGAAATGGAAGTCCCAGAAG+AGG	+	chr5.1:17975634-17975653	None:intergenic	45.0%
	AGATTCCAAGGTCTGTGACT+GGG	-	chr5.1:17977744-17977763	MS.gene72868:CDS	45.0%
	AGCAACAAGACAGGCAGAAA+AGG	+	chr5.1:17976994-17977013	None:intergenic	45.0%
	AGGGTTGTTAGCTCCAAACA+TGG	-	chr5.1:17976692-17976711	MS.gene72868:intron	45.0%
	ATGGTGTAACAACAGCACCT+AGG	+	chr5.1:17975791-17975810	None:intergenic	45.0%
	CACAGACCTTGGAATCTTGT+CGG	+	chr5.1:17977741-17977760	None:intergenic	45.0%
	CGTAAGCAGGTTAATGACTG+TGG	-	chr5.1:17975840-17975859	MS.gene72868:intron	45.0%
	GAAAAGGTTCAAGTGGCTTG+AGG	+	chr5.1:17976978-17976997	None:intergenic	45.0%
	GCTGTCAATGCCGACAATAT+CGG	+	chr5.1:17976347-17976366	None:intergenic	45.0%
	GTTGTTAGCTCCAAACATGG+AGG	-	chr5.1:17976695-17976714	MS.gene72868:intron	45.0%
	TACAACGTCGAGAAAAGGGT+CGG	+	chr5.1:17975562-17975581	None:intergenic	45.0%
	TCCAAACATGGAGGCAAAAG+TGG	-	chr5.1:17976704-17976723	MS.gene72868:intron	45.0%
	TCTTCACCGACAAGATTCCA+AGG	-	chr5.1:17977732-17977751	MS.gene72868:CDS	45.0%
	TTCTTGACCACAAATGCCAC+TGG	+	chr5.1:17977516-17977535	None:intergenic	45.0%
!	AGTTTCTGAGTTGCTTTCGG+AGG	+	chr5.1:17977775-17977794	None:intergenic	45.0%
!	TTGCAGAGTTTGAGACAGGT+CGG	-	chr5.1:17976395-17976414	MS.gene72868:intron	45.0%
!!	ACCACTTTTGCCTCCATGTT+TGG	+	chr5.1:17976708-17976727	None:intergenic	45.0%
!!	GCCCTTATTGATTCCTCTTC+TGG	-	chr5.1:17975618-17975637	MS.gene72868:intron	45.0%
!!	TATCGACTTCGTTGCTAAGC+AGG	-	chr5.1:17977566-17977585	MS.gene72868:CDS	45.0%
!!	TAATAAATATAAATACTAAA+AGG	-	chr5.1:17976836-17976855	MS.gene72868:CDS	5.0%
	AAAGCTCACCACTTCTGCCT+GGG	+	chr5.1:17976758-17976777	None:intergenic	50.0%
	ACGGCGACATCCACTATTTC+AGG	+	chr5.1:17977366-17977385	None:intergenic	50.0%
	AGGGCTAAAACCCCATCATG+AGG	+	chr5.1:17975603-17975622	None:intergenic	50.0%
	AGTGCCAAGGATGAAGAAGC+TGG	-	chr5.1:17977483-17977502	MS.gene72868:CDS	50.0%
	ATCTTCCCAGTCACAGACCT+TGG	+	chr5.1:17977752-17977771	None:intergenic	50.0%
	ATGACTGAGTCGGGTGCATT+AGG	-	chr5.1:17976624-17976643	MS.gene72868:CDS	50.0%
	GCAGGTTGCTCCATTCAAGA+AGG	-	chr5.1:17977697-17977716	MS.gene72868:CDS	50.0%
	GGAGATTCCAGTGGCATTTG+TGG	-	chr5.1:17977506-17977525	MS.gene72868:CDS	50.0%
	GGGCTAAAACCCCATCATGA+GGG	+	chr5.1:17975602-17975621	None:intergenic	50.0%
	GGTACTACAGGTGTGAGCAA+AGG	-	chr5.1:17976065-17976084	MS.gene72868:CDS	50.0%
	GTCAATGCCGACAATATCGG+TGG	+	chr5.1:17976344-17976363	None:intergenic	50.0%
	GTGCCAAGGATGAAGAAGCT+GGG	-	chr5.1:17977484-17977503	MS.gene72868:CDS	50.0%
	TGCCAAGGATGAAGAAGCTG+GGG	-	chr5.1:17977485-17977504	MS.gene72868:CDS	50.0%
!	AGTGGTGAGCTTTGGTTGAG+AGG	-	chr5.1:17976765-17976784	MS.gene72868:intron	50.0%
!	GCATTGACAGCGAAGGCAAA+GGG	-	chr5.1:17976356-17976375	MS.gene72868:intron	50.0%
!	GCGAAGGCAAAGGGTGTAAA+TGG	-	chr5.1:17976365-17976384	MS.gene72868:intron	50.0%
!	TAGTGGATGTCGCCGTTACA+GGG	-	chr5.1:17977370-17977389	MS.gene72868:CDS	50.0%
!!	ATAGTGGATGTCGCCGTTAC+AGG	-	chr5.1:17977369-17977388	MS.gene72868:CDS	50.0%
!!	ATTGTCGGCATTGACAGCGA+AGG	-	chr5.1:17976349-17976368	MS.gene72868:intron	50.0%
	AAGCTCACCACTTCTGCCTG+GGG	+	chr5.1:17976757-17976776	None:intergenic	55.0%
	ACGTCGAGAAAAGGGTCGGT+CGG	+	chr5.1:17975558-17975577	None:intergenic	55.0%
	AGAAGCTGGGGAGATTCCAG+TGG	-	chr5.1:17977497-17977516	MS.gene72868:CDS	55.0%
	CAAAGCTCACCACTTCTGCC+TGG	+	chr5.1:17976759-17976778	None:intergenic	55.0%
	CAGGCAGAAGTGGTGAGCTT+TGG	-	chr5.1:17976757-17976776	MS.gene72868:intron	55.0%
	CCTCGCCAAAAGCTCAACCA+TGG	+	chr5.1:17976120-17976139	None:intergenic	55.0%
	CTCCCCAGCTTCTTCATCCT+TGG	+	chr5.1:17977490-17977509	None:intergenic	55.0%
!	CCATGGTTGAGCTTTTGGCG+AGG	-	chr5.1:17976117-17976136	MS.gene72868:CDS	55.0%
!	TCGGGTGCATTAGGAGCATG+CGG	-	chr5.1:17976633-17976652	MS.gene72868:intron	55.0%
!	TTTTTGCCCCCAGGCAGAAG+TGG	-	chr5.1:17976747-17976766	MS.gene72868:intron	55.0%
!!	GGCATTGACAGCGAAGGCAA+AGG	-	chr5.1:17976355-17976374	MS.gene72868:intron	55.0%
	AGCTCACCACTTCTGCCTGG+GGG	+	chr5.1:17976756-17976775	None:intergenic	60.0%
	CGAGAAAAGGGTCGGTCGGA+AGG	+	chr5.1:17975554-17975573	None:intergenic	60.0%
!	AGTGGTGCGTTTTTGCCCCC+AGG	-	chr5.1:17976738-17976757	MS.gene72868:intron	60.0%
	GGGTCGGTCGGAAGGCTCCT+AGG	+	chr5.1:17975546-17975565	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	17975447	17977814	17975447	ID=MS.gene72868
chr5.1	mRNA	17975447	17977814	17975447	ID=MS.gene72868.t1;Parent=MS.gene72868
chr5.1	exon	17976768	17977814	17976768	ID=MS.gene72868.t1.exon1;Parent=MS.gene72868.t1
chr5.1	CDS	17976768	17977814	17976768	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1
chr5.1	exon	17976457	17976646	17976457	ID=MS.gene72868.t1.exon2;Parent=MS.gene72868.t1
chr5.1	CDS	17976457	17976646	17976457	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1
chr5.1	exon	17976057	17976202	17976057	ID=MS.gene72868.t1.exon3;Parent=MS.gene72868.t1
chr5.1	CDS	17976057	17976202	17976057	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1
chr5.1	exon	17975870	17975937	17975870	ID=MS.gene72868.t1.exon4;Parent=MS.gene72868.t1
chr5.1	CDS	17975870	17975937	17975870	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1
chr5.1	exon	17975674	17975776	17975674	ID=MS.gene72868.t1.exon5;Parent=MS.gene72868.t1
chr5.1	CDS	17975674	17975776	17975674	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1
chr5.1	exon	17975447	17975560	17975447	ID=MS.gene72868.t1.exon6;Parent=MS.gene72868.t1
chr5.1	CDS	17975447	17975560	17975447	ID=cds.MS.gene72868.t1;Parent=MS.gene72868.t1

Gene Sequence

>MS.gene72868

ATGGCTGCAAATTTAAACTATGACATGCCACAAAATATCATCACTCACCCTTCTTGGTACTCACCAAAAACCGGAATTTACAATAGTATACACTCTCCTAGGAGCCTTCCGACCGACCCTTTTCTCGACGTTGTATCGTTCATTTTTTCTCACCCTCATGATGGGGTTTTAGCCCTTATTGATTCCTCTTCTGGGACTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCAATGGCTTCTGGTCTTCATAAAATGGGAGTTTCACAAGGTGACCTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATTGTACTATTAGGTGTTATGTACCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTTGATGAAATTCGTAAGCAGGTTAATGACTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGTTAAGAAATTAGAACCATTAGGCATTCCTATTATTTCTGTGCCAGAAAATGAAAAGGATTCGATGAATGATTGTTTCTCATGTTTTTTTAACCTGATTTCTGGTAACTTTGTTTTGCCTCAAAATCTGGTTATTAAACAAGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACAGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCCATGGTTGAGCTTTTGGCGAGGTTTGAAACTTCTAAATATGAATGCTCTAGTTCCAAAAATGTGTATCTAGCTGTTTTGCCGATGTTCCATTTATATGGTTTATCTCTCTTTGCTACGGGATTATTGTCATTGGGTTCTTCAATCGTTGTAATGAGGAAATTTGACATTGATGAGACTATTAGGGTGATCGATAAATATAAAGTTACACACTTTCATCTTGTTCCACCGATATTGTCGGCATTGACAGCGAAGGCAAAGGGTGTAAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTCGGCTCTAGTGCAGCGCCTTTAAGCACAAAAGCTATAAATGATTTTGTCCAAGCTCTCCCTAATGTTGATTTTATACAGGTAAAAACCTCAGAATAAAATAGTCTTATTTAAAGAATGCAAGTCATGATCCATCATTCAAATAATGTTGTTTTCCTAGATTTTTTTAAGGATGTGCAGATGTAAAATTGTTTCTTTTTAGGTTTATGGAATGACTGAGTCGGGTGCATTAGGAGCATGCGGTTTCAATACAGAAAAATTTCGCAACTATTCTTCACTAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTATATTGGAATAGTGGTGCGTTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGTCCTTCAATTATGAAAGGTAAAAATAATCTGCATTTTTTATGAATAGATAATAAATATAAATACTAAAAGGATAACATGGTTATATAAAGGTTTTGTCTATTGTGTGGAATCTTAACCTACATTAGCATGAGATTGATTCAATGATTTCAACTGTTTTGTTGCTGTAACTTTTGTTTCTGTCTTATTCCTCAAGCCACTTGAACCTTTTCTGCCTGTCTTGTTGCTATTCCAATTGAAATTATTAATCAAACTTTTTCCTTAATTTCTTAGGATACTTGAATAATAAGGAAGCTACAATGTCGACAATTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTATTTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGGTATCAATTTTTTTGTTTATTTAAATTTTATAGTGATGTTACATATTTTTATTTTACAGTTTATTTTTACTCAATTAGTATGCATTGTTCTTATTTATATCACACATGATCTGTTACAGATTCCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTGGATGTCGCCGTTACAGGGTAAGTATATGAACACTTCATTTATGTCTTCTAAGATGCCTCTTTAGACATTTAAATATAACCTTAAGTGTTTCATCATTTTCCATATATCAGTGCCAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTCAAGAAAGTTGGAAGTGTACTTTCTCCAAAGGATGTTATCGACTTCGTTGCTAAGCAGGTTCTTCTTTATAAGACAGACATGAGTTCTATGATATTTGAATTAATATTACTACTTGAATCAATGTTAGTATTGGAATGGTTTTCAAATTTTAACCCTTTTTTTCTTGGCAGGTTGCTCCATTCAAGAAGGTTCGCAAAGTGGTCTTCACCGACAAGATTCCAAGGTCTGTGACTGGGAAGATCCTCCGAAAGCAACTCAGAAACTGCTTGCCTTCTAAACTCTAA

Protein sequence

>MS.gene72868.t1

MAANLNYDMPQNIITHPSWYSPKTGIYNSIHSPRSLPTDPFLDVVSFIFSHPHDGVLALIDSSSGTSISYSKLLPLVKSMASGLHKMGVSQGDLVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSVDEIRKQVNDCGVSFAFTIPENVKKLEPLGIPIISVPENEKDSMNDCFSCFFNLISGNFVLPQNLVIKQEDTAAILFSSGTTGVSKGVVLTHRNLIAMVELLARFETSKYECSSSKNVYLAVLPMFHLYGLSLFATGLLSLGSSIVVMRKFDIDETIRVIDKYKVTHFHLVPPILSALTAKAKGVNGSKLQSLRQVGSSAAPLSTKAINDFVQALPNVDFIQVYGMTESGALGACGFNTEKFRNYSSLGLLAPNMEAKVVYWNSGAFLPPGRSGELWLRGPSIMKGYLNNKEATMSTIDKDGWLHTGDIVYFDQDGYLYLFDRLKEFIKYKGFQIPPADLEAVLILHPEIVDVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTDKIPRSVTGKILRKQLRNCLPSKL