Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35477.t1 | XP_003602078.1 | 97.4 | 392 | 9 | 1 | 43 | 433 | 169 | 560 | 2.50E-214 | 754.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35477.t1 | Q84P23 | 66.0 | 423 | 138 | 3 | 15 | 433 | 142 | 562 | 9.9e-159 | 561.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35477.t1 | G7J516 | 97.4 | 392 | 9 | 1 | 43 | 433 | 169 | 560 | 1.8e-214 | 754.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35477.t1 | MTR_3g088880 | 96.905 | 420 | 12 | 1 | 15 | 433 | 141 | 560 | 0.0 | 833 |
MS.gene35477.t1 | MTR_3g088870 | 92.908 | 423 | 26 | 1 | 15 | 433 | 140 | 562 | 0.0 | 806 |
MS.gene35477.t1 | MTR_1g073180 | 54.878 | 410 | 180 | 4 | 15 | 423 | 123 | 528 | 2.58e-160 | 463 |
MS.gene35477.t1 | MTR_1g073180 | 54.337 | 392 | 172 | 5 | 15 | 405 | 145 | 530 | 3.10e-147 | 429 |
MS.gene35477.t1 | MTR_8g039720 | 47.754 | 423 | 195 | 5 | 25 | 425 | 137 | 555 | 8.88e-133 | 394 |
MS.gene35477.t1 | MTR_1g026310 | 47.143 | 420 | 200 | 7 | 25 | 425 | 140 | 556 | 2.54e-132 | 392 |
MS.gene35477.t1 | MTR_2g095510 | 45.038 | 393 | 211 | 3 | 37 | 425 | 144 | 535 | 3.65e-119 | 358 |
MS.gene35477.t1 | MTR_4g077900 | 46.524 | 374 | 193 | 4 | 52 | 421 | 100 | 470 | 1.63e-117 | 352 |
MS.gene35477.t1 | MTR_4g057730 | 47.581 | 372 | 192 | 3 | 52 | 422 | 166 | 535 | 4.90e-117 | 353 |
MS.gene35477.t1 | MTR_1g090737 | 47.393 | 422 | 208 | 9 | 11 | 422 | 142 | 559 | 1.21e-116 | 352 |
MS.gene35477.t1 | MTR_5g027480 | 44.363 | 408 | 210 | 6 | 28 | 421 | 143 | 547 | 3.99e-113 | 343 |
MS.gene35477.t1 | MTR_5g027500 | 46.575 | 365 | 189 | 5 | 68 | 428 | 204 | 566 | 1.59e-110 | 337 |
MS.gene35477.t1 | MTR_1g063120 | 48.098 | 368 | 173 | 8 | 73 | 428 | 192 | 553 | 1.68e-109 | 333 |
MS.gene35477.t1 | MTR_1g063110 | 45.333 | 375 | 186 | 8 | 58 | 422 | 176 | 541 | 1.34e-101 | 313 |
MS.gene35477.t1 | MTR_2g105570 | 46.910 | 356 | 175 | 5 | 76 | 421 | 190 | 541 | 1.50e-100 | 310 |
MS.gene35477.t1 | MTR_5g007640 | 43.299 | 388 | 203 | 7 | 46 | 421 | 197 | 579 | 1.30e-98 | 306 |
MS.gene35477.t1 | MTR_4g005750 | 44.125 | 383 | 200 | 5 | 49 | 421 | 156 | 534 | 4.60e-93 | 291 |
MS.gene35477.t1 | MTR_4g128337 | 42.659 | 361 | 193 | 5 | 70 | 421 | 185 | 540 | 3.19e-88 | 279 |
MS.gene35477.t1 | MTR_4g057730 | 47.078 | 308 | 160 | 3 | 52 | 358 | 166 | 471 | 1.38e-85 | 270 |
MS.gene35477.t1 | MTR_3g460770 | 37.065 | 402 | 238 | 6 | 30 | 419 | 133 | 531 | 5.19e-83 | 265 |
MS.gene35477.t1 | MTR_2g095510 | 42.434 | 304 | 170 | 3 | 37 | 336 | 144 | 446 | 3.46e-77 | 247 |
MS.gene35477.t1 | MTR_4g057730 | 46.886 | 273 | 143 | 2 | 65 | 336 | 178 | 449 | 2.70e-75 | 242 |
MS.gene35477.t1 | MTR_1569s0010 | 31.070 | 383 | 230 | 9 | 57 | 421 | 161 | 527 | 1.51e-44 | 162 |
MS.gene35477.t1 | MTR_1g026430 | 35.606 | 264 | 148 | 7 | 25 | 269 | 140 | 400 | 1.10e-43 | 158 |
MS.gene35477.t1 | MTR_1g026470 | 35.316 | 269 | 152 | 7 | 25 | 274 | 140 | 405 | 1.15e-43 | 158 |
MS.gene35477.t1 | MTR_3g035130 | 29.327 | 416 | 259 | 14 | 22 | 419 | 107 | 505 | 1.09e-38 | 146 |
MS.gene35477.t1 | MTR_0803s0020 | 28.312 | 385 | 242 | 10 | 49 | 415 | 366 | 734 | 4.37e-38 | 147 |
MS.gene35477.t1 | MTR_0161s0050 | 27.578 | 417 | 268 | 11 | 37 | 433 | 153 | 555 | 1.82e-37 | 144 |
MS.gene35477.t1 | MTR_5g008800 | 29.223 | 373 | 237 | 9 | 74 | 430 | 180 | 541 | 1.55e-36 | 141 |
MS.gene35477.t1 | MTR_3g088890 | 86.957 | 69 | 9 | 0 | 331 | 399 | 10 | 78 | 5.52e-36 | 128 |
MS.gene35477.t1 | MTR_5g076220 | 27.295 | 414 | 265 | 11 | 37 | 430 | 153 | 550 | 2.72e-35 | 137 |
MS.gene35477.t1 | MTR_8g074040 | 28.418 | 373 | 242 | 10 | 73 | 430 | 105 | 467 | 4.73e-34 | 133 |
MS.gene35477.t1 | MTR_8g074040 | 28.418 | 373 | 242 | 10 | 73 | 430 | 223 | 585 | 1.07e-33 | 133 |
MS.gene35477.t1 | MTR_8g074120 | 27.614 | 373 | 245 | 9 | 73 | 430 | 134 | 496 | 2.08e-33 | 131 |
MS.gene35477.t1 | MTR_5g076240 | 28.800 | 375 | 240 | 12 | 72 | 429 | 184 | 548 | 6.12e-33 | 130 |
MS.gene35477.t1 | MTR_3g064420 | 28.022 | 364 | 227 | 8 | 82 | 421 | 194 | 546 | 6.58e-33 | 131 |
MS.gene35477.t1 | MTR_5g008820 | 27.778 | 414 | 264 | 12 | 40 | 430 | 138 | 539 | 1.37e-32 | 129 |
MS.gene35477.t1 | MTR_4g011790 | 25.829 | 422 | 277 | 11 | 27 | 421 | 179 | 591 | 5.50e-32 | 128 |
MS.gene35477.t1 | MTR_5g076200 | 27.559 | 381 | 244 | 12 | 73 | 433 | 185 | 553 | 1.26e-31 | 127 |
MS.gene35477.t1 | MTR_4g013210 | 26.753 | 385 | 243 | 11 | 71 | 424 | 65 | 441 | 5.76e-31 | 124 |
MS.gene35477.t1 | MTR_4g011790 | 25.175 | 429 | 280 | 12 | 27 | 421 | 179 | 600 | 6.13e-31 | 125 |
MS.gene35477.t1 | MTR_2g044180 | 26.972 | 393 | 255 | 12 | 62 | 433 | 91 | 472 | 1.08e-30 | 123 |
MS.gene35477.t1 | MTR_4g011790 | 25.659 | 417 | 274 | 11 | 27 | 416 | 179 | 586 | 1.18e-30 | 124 |
MS.gene35477.t1 | MTR_2g044180 | 26.972 | 393 | 255 | 12 | 62 | 433 | 182 | 563 | 1.92e-30 | 124 |
MS.gene35477.t1 | MTR_4g121600 | 27.078 | 373 | 233 | 14 | 74 | 421 | 193 | 551 | 5.48e-29 | 119 |
MS.gene35477.t1 | MTR_3g035130 | 28.108 | 370 | 231 | 14 | 22 | 373 | 107 | 459 | 2.41e-26 | 111 |
MS.gene35477.t1 | MTR_4g013210 | 26.536 | 358 | 224 | 11 | 71 | 397 | 217 | 566 | 1.33e-25 | 109 |
MS.gene35477.t1 | MTR_1g104810 | 27.528 | 356 | 198 | 11 | 37 | 344 | 223 | 566 | 2.06e-25 | 109 |
MS.gene35477.t1 | MTR_1g104810 | 27.528 | 356 | 198 | 11 | 37 | 344 | 156 | 499 | 2.53e-25 | 108 |
MS.gene35477.t1 | MTR_1054s0020 | 26.415 | 371 | 248 | 11 | 70 | 431 | 424 | 778 | 4.39e-25 | 108 |
MS.gene35477.t1 | MTR_4g013210 | 26.273 | 373 | 219 | 12 | 71 | 424 | 65 | 400 | 1.53e-24 | 105 |
MS.gene35477.t1 | MTR_4g013210 | 26.273 | 373 | 219 | 12 | 71 | 424 | 217 | 552 | 3.55e-24 | 105 |
MS.gene35477.t1 | MTR_2g030240 | 25.284 | 352 | 213 | 9 | 46 | 361 | 34 | 371 | 1.96e-22 | 99.8 |
MS.gene35477.t1 | MTR_2g030240 | 25.284 | 352 | 213 | 9 | 46 | 361 | 128 | 465 | 3.45e-22 | 99.4 |
MS.gene35477.t1 | MTR_5g023730 | 22.872 | 376 | 234 | 11 | 73 | 418 | 184 | 533 | 4.07e-20 | 93.2 |
MS.gene35477.t1 | MTR_4g057755 | 53.425 | 73 | 34 | 0 | 285 | 357 | 46 | 118 | 8.58e-20 | 85.1 |
MS.gene35477.t1 | MTR_3g084450 | 39.355 | 155 | 77 | 5 | 200 | 342 | 248 | 397 | 8.19e-19 | 89.0 |
MS.gene35477.t1 | MTR_7g084850 | 25.464 | 377 | 255 | 11 | 69 | 425 | 350 | 720 | 1.04e-18 | 89.4 |
MS.gene35477.t1 | MTR_3g084450 | 39.355 | 155 | 77 | 5 | 200 | 342 | 456 | 605 | 1.95e-18 | 88.2 |
MS.gene35477.t1 | MTR_5g009360 | 27.013 | 385 | 220 | 14 | 23 | 356 | 49 | 423 | 5.36e-18 | 86.7 |
MS.gene35477.t1 | MTR_8g083170 | 38.125 | 160 | 74 | 5 | 200 | 343 | 459 | 609 | 7.01e-18 | 86.7 |
MS.gene35477.t1 | MTR_5g009360 | 27.013 | 385 | 220 | 14 | 23 | 356 | 175 | 549 | 8.07e-18 | 86.3 |
MS.gene35477.t1 | MTR_5g009350 | 25.758 | 396 | 234 | 15 | 23 | 367 | 175 | 561 | 1.48e-17 | 85.5 |
MS.gene35477.t1 | MTR_5g009350 | 25.521 | 384 | 227 | 14 | 23 | 356 | 175 | 549 | 1.59e-17 | 85.1 |
MS.gene35477.t1 | MTR_5g009350 | 25.781 | 384 | 226 | 14 | 23 | 356 | 175 | 549 | 1.91e-17 | 85.1 |
MS.gene35477.t1 | MTR_5g009350 | 25.781 | 384 | 226 | 14 | 23 | 356 | 175 | 549 | 2.17e-17 | 85.1 |
MS.gene35477.t1 | MTR_3g084470 | 36.129 | 155 | 82 | 5 | 200 | 342 | 452 | 601 | 7.84e-16 | 80.1 |
MS.gene35477.t1 | MTR_1g034360 | 25.833 | 360 | 202 | 11 | 23 | 330 | 175 | 521 | 5.43e-15 | 77.4 |
MS.gene35477.t1 | MTR_4g013210 | 27.431 | 288 | 155 | 12 | 71 | 345 | 217 | 463 | 8.46e-15 | 76.6 |
MS.gene35477.t1 | MTR_2g098490 | 22.807 | 456 | 284 | 17 | 22 | 422 | 597 | 1039 | 1.30e-13 | 73.9 |
MS.gene35477.t1 | MTR_4g066130 | 24.045 | 445 | 266 | 19 | 34 | 422 | 614 | 1042 | 1.17e-12 | 70.9 |
MS.gene35477.t1 | MTR_4g013210 | 26.471 | 238 | 147 | 8 | 71 | 288 | 217 | 446 | 2.95e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35477.t1 | AT5G63380 | 65.957 | 423 | 138 | 3 | 15 | 433 | 142 | 562 | 0.0 | 581 |
MS.gene35477.t1 | AT1G20510 | 46.897 | 435 | 215 | 7 | 11 | 433 | 116 | 546 | 5.64e-138 | 406 |
MS.gene35477.t1 | AT1G20500 | 47.307 | 427 | 202 | 8 | 15 | 425 | 127 | 546 | 8.34e-134 | 396 |
MS.gene35477.t1 | AT5G38120 | 48.325 | 418 | 196 | 8 | 24 | 427 | 137 | 548 | 1.56e-132 | 393 |
MS.gene35477.t1 | AT1G20480 | 47.113 | 433 | 205 | 8 | 11 | 424 | 133 | 560 | 2.40e-131 | 390 |
MS.gene35477.t1 | AT4G05160 | 46.099 | 423 | 213 | 5 | 15 | 423 | 117 | 538 | 2.97e-121 | 363 |
MS.gene35477.t1 | AT4G19010 | 44.784 | 393 | 210 | 5 | 45 | 433 | 177 | 566 | 7.47e-116 | 350 |
MS.gene35477.t1 | AT5G38120 | 47.396 | 384 | 182 | 8 | 24 | 393 | 137 | 514 | 4.79e-115 | 347 |
MS.gene35477.t1 | AT1G20510 | 45.000 | 360 | 184 | 6 | 11 | 358 | 116 | 473 | 9.55e-103 | 314 |
MS.gene35477.t1 | AT3G21240 | 42.857 | 378 | 195 | 5 | 59 | 421 | 175 | 546 | 2.99e-100 | 310 |
MS.gene35477.t1 | AT1G65060 | 42.455 | 391 | 199 | 5 | 41 | 421 | 182 | 556 | 7.42e-98 | 304 |
MS.gene35477.t1 | AT5G38120 | 46.705 | 349 | 166 | 8 | 24 | 358 | 137 | 479 | 1.37e-97 | 301 |
MS.gene35477.t1 | AT5G38120 | 46.705 | 349 | 166 | 8 | 24 | 358 | 137 | 479 | 1.37e-97 | 301 |
MS.gene35477.t1 | AT1G51680 | 43.251 | 363 | 189 | 4 | 70 | 421 | 197 | 553 | 8.95e-93 | 291 |
MS.gene35477.t1 | AT1G20510 | 43.491 | 338 | 177 | 6 | 11 | 336 | 116 | 451 | 2.66e-91 | 284 |
MS.gene35477.t1 | AT3G21230 | 42.005 | 369 | 196 | 5 | 64 | 421 | 199 | 560 | 5.86e-85 | 271 |
MS.gene35477.t1 | AT1G62940 | 42.819 | 376 | 196 | 8 | 62 | 427 | 172 | 538 | 3.23e-83 | 265 |
MS.gene35477.t1 | AT1G51680 | 42.090 | 335 | 177 | 4 | 70 | 393 | 197 | 525 | 2.19e-80 | 258 |
MS.gene35477.t1 | AT3G21240 | 41.139 | 316 | 165 | 5 | 59 | 359 | 175 | 484 | 5.50e-75 | 243 |
MS.gene35477.t1 | AT3G21240 | 41.139 | 316 | 165 | 5 | 59 | 359 | 175 | 484 | 5.50e-75 | 243 |
MS.gene35477.t1 | AT3G21230 | 41.056 | 341 | 183 | 5 | 64 | 393 | 199 | 532 | 1.23e-73 | 241 |
MS.gene35477.t1 | AT1G51680 | 42.475 | 299 | 155 | 4 | 70 | 357 | 197 | 489 | 2.26e-70 | 231 |
MS.gene35477.t1 | AT1G20490 | 38.710 | 310 | 165 | 7 | 15 | 306 | 127 | 429 | 9.86e-65 | 214 |
MS.gene35477.t1 | AT1G20490 | 38.710 | 310 | 165 | 7 | 15 | 306 | 127 | 429 | 9.86e-65 | 214 |
MS.gene35477.t1 | AT3G21230 | 40.328 | 305 | 164 | 5 | 64 | 357 | 199 | 496 | 2.71e-62 | 209 |
MS.gene35477.t1 | AT1G65060 | 37.338 | 308 | 167 | 5 | 41 | 338 | 182 | 473 | 2.03e-60 | 204 |
MS.gene35477.t1 | AT1G77240 | 29.888 | 358 | 229 | 9 | 82 | 425 | 192 | 541 | 1.75e-44 | 163 |
MS.gene35477.t1 | AT5G16370 | 30.319 | 376 | 238 | 10 | 73 | 433 | 183 | 549 | 7.36e-41 | 153 |
MS.gene35477.t1 | AT1G75960 | 29.973 | 367 | 236 | 8 | 73 | 425 | 182 | 541 | 1.18e-39 | 149 |
MS.gene35477.t1 | AT1G21540 | 30.194 | 361 | 227 | 8 | 82 | 425 | 194 | 546 | 1.55e-39 | 149 |
MS.gene35477.t1 | AT5G16340 | 29.867 | 375 | 241 | 9 | 73 | 433 | 183 | 549 | 4.00e-39 | 148 |
MS.gene35477.t1 | AT1G21530 | 28.297 | 364 | 236 | 8 | 82 | 427 | 191 | 547 | 1.85e-37 | 143 |
MS.gene35477.t1 | AT1G21530 | 28.846 | 364 | 232 | 8 | 82 | 427 | 191 | 545 | 7.74e-37 | 142 |
MS.gene35477.t1 | AT1G65890 | 27.822 | 381 | 233 | 8 | 74 | 425 | 185 | 552 | 7.28e-35 | 136 |
MS.gene35477.t1 | AT1G65880 | 28.534 | 382 | 230 | 9 | 74 | 425 | 185 | 553 | 4.77e-34 | 134 |
MS.gene35477.t1 | AT1G66120 | 27.297 | 370 | 244 | 7 | 73 | 425 | 184 | 545 | 5.49e-34 | 134 |
MS.gene35477.t1 | AT3G48990 | 29.380 | 371 | 239 | 11 | 58 | 419 | 148 | 504 | 6.45e-33 | 130 |
MS.gene35477.t1 | AT1G20560 | 27.520 | 367 | 237 | 10 | 68 | 418 | 104 | 457 | 3.42e-32 | 127 |
MS.gene35477.t1 | AT1G20560 | 27.520 | 367 | 237 | 10 | 68 | 418 | 182 | 535 | 6.91e-32 | 128 |
MS.gene35477.t1 | AT3G21230 | 34.454 | 238 | 138 | 5 | 64 | 290 | 199 | 429 | 1.03e-30 | 123 |
MS.gene35477.t1 | AT2G17650 | 26.913 | 379 | 241 | 10 | 73 | 430 | 239 | 602 | 6.15e-29 | 119 |
MS.gene35477.t1 | AT1G76290 | 26.790 | 433 | 277 | 14 | 27 | 433 | 124 | 542 | 1.52e-27 | 115 |
MS.gene35477.t1 | AT5G27600 | 30.056 | 356 | 187 | 13 | 38 | 344 | 227 | 569 | 2.48e-27 | 115 |
MS.gene35477.t1 | AT3G16910 | 26.790 | 377 | 237 | 14 | 69 | 421 | 193 | 554 | 6.89e-27 | 113 |
MS.gene35477.t1 | AT1G30520 | 26.166 | 386 | 238 | 10 | 73 | 421 | 170 | 545 | 2.47e-25 | 108 |
MS.gene35477.t1 | AT1G30520 | 26.166 | 386 | 238 | 10 | 73 | 421 | 170 | 545 | 2.47e-25 | 108 |
MS.gene35477.t1 | AT3G16170 | 24.202 | 376 | 245 | 9 | 76 | 421 | 235 | 600 | 3.19e-23 | 102 |
MS.gene35477.t1 | AT1G68270 | 29.885 | 261 | 144 | 8 | 197 | 429 | 275 | 524 | 9.67e-22 | 98.2 |
MS.gene35477.t1 | AT3G05970 | 27.329 | 322 | 180 | 12 | 67 | 344 | 258 | 569 | 6.53e-21 | 95.9 |
MS.gene35477.t1 | AT1G30520 | 27.055 | 292 | 180 | 7 | 73 | 341 | 170 | 451 | 6.08e-20 | 92.4 |
MS.gene35477.t1 | AT1G30520 | 27.055 | 292 | 180 | 7 | 73 | 341 | 170 | 451 | 6.08e-20 | 92.4 |
MS.gene35477.t1 | AT1G64400 | 29.904 | 311 | 161 | 11 | 71 | 330 | 219 | 523 | 2.67e-19 | 90.9 |
MS.gene35477.t1 | AT5G36880 | 25.474 | 369 | 250 | 10 | 76 | 425 | 353 | 715 | 9.34e-18 | 86.3 |
MS.gene35477.t1 | AT5G36880 | 25.479 | 365 | 247 | 10 | 80 | 425 | 307 | 665 | 1.06e-17 | 86.3 |
MS.gene35477.t1 | AT5G36880 | 25.479 | 365 | 247 | 10 | 80 | 425 | 307 | 665 | 1.06e-17 | 86.3 |
MS.gene35477.t1 | AT5G36880 | 25.479 | 365 | 247 | 10 | 80 | 425 | 307 | 665 | 1.06e-17 | 86.3 |
MS.gene35477.t1 | AT5G36880 | 25.479 | 365 | 247 | 10 | 80 | 425 | 307 | 665 | 1.06e-17 | 86.3 |
MS.gene35477.t1 | AT2G47240 | 24.824 | 427 | 245 | 16 | 76 | 433 | 221 | 640 | 8.20e-16 | 80.1 |
MS.gene35477.t1 | AT2G47240 | 24.824 | 427 | 245 | 16 | 76 | 433 | 221 | 640 | 8.20e-16 | 80.1 |
MS.gene35477.t1 | AT2G47240 | 24.824 | 427 | 245 | 16 | 76 | 433 | 221 | 640 | 8.20e-16 | 80.1 |
MS.gene35477.t1 | AT2G47240 | 24.824 | 427 | 245 | 16 | 76 | 433 | 162 | 581 | 9.69e-16 | 79.7 |
MS.gene35477.t1 | AT3G23790 | 41.228 | 114 | 61 | 3 | 200 | 312 | 457 | 565 | 9.26e-14 | 73.9 |
MS.gene35477.t1 | AT4G14070 | 38.596 | 114 | 64 | 3 | 200 | 312 | 473 | 581 | 5.91e-12 | 68.2 |
MS.gene35477.t1 | AT1G49430 | 27.324 | 355 | 192 | 16 | 57 | 356 | 208 | 551 | 1.77e-11 | 66.6 |
MS.gene35477.t1 | AT5G36880 | 24.490 | 294 | 200 | 9 | 80 | 357 | 307 | 594 | 2.25e-11 | 66.2 |
Find 117 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAACCAAAGCTCCCCTTTC+TGG | 0.150099 | 3.4:-73573070 | None:intergenic |
CATCTTCAATCCCGTGCTTT+AGG | 0.242961 | 3.4:-73566287 | None:intergenic |
ACCTGCACAATTTCCATATT+GGG | 0.252494 | 3.4:-73566609 | None:intergenic |
AACCTGCACAATTTCCATAT+TGG | 0.265477 | 3.4:-73566610 | None:intergenic |
GACTGTGCCGAGGGGTAGTT+TGG | 0.279101 | 3.4:-73566076 | None:intergenic |
ACTGCAGCATCAGCAATTTC+AGG | 0.286327 | 3.4:-73573742 | None:intergenic |
ACTACAGCATCAGCAATTTC+AGG | 0.293927 | 3.4:+73563608 | MS.gene35477:CDS |
GCTGCAGTGATGTTGCTTCC+TGG | 0.300397 | 3.4:-73573984 | None:intergenic |
TTTGACTCGTCCTGTTGTTC+CGG | 0.308375 | 3.4:-73566211 | None:intergenic |
GATCAAATACAAAGCTTATC+AGG | 0.313622 | 3.4:+73573599 | MS.gene35477:CDS |
GATAATGCCTCTCCAGTAAC+AGG | 0.326281 | 3.4:-73573041 | None:intergenic |
CAAAGCTAAATTCCCCAATA+TGG | 0.328372 | 3.4:+73566596 | MS.gene35477:CDS |
AAGATAGTTGACCCTGTTAC+TGG | 0.341306 | 3.4:+73573029 | MS.gene35477:CDS |
CGCAACTTCATAGCTTTAAT+CGG | 0.345492 | 3.4:+73566252 | MS.gene35477:CDS |
CTGGCCAGAAAGGGGAGCTT+TGG | 0.355601 | 3.4:+73573066 | MS.gene35477:CDS |
GGTTTCGCCGCCGTTGATTA+CGG | 0.360212 | 3.4:+73566473 | MS.gene35477:CDS |
TGTTTCAACCGGGCGAGGTT+CGG | 0.367528 | 3.4:-73566154 | None:intergenic |
ATTGTTTACTTGTAGGGATA+TGG | 0.368434 | 3.4:+73572909 | MS.gene35477:intron |
TAATCACCTTTCATGATTGT+TGG | 0.368870 | 3.4:-73573098 | None:intergenic |
CTCTTCTCATCCGGAACAAC+AGG | 0.380287 | 3.4:+73566201 | MS.gene35477:CDS |
GGGTCGACTAGCAGAAAATA+TGG | 0.400111 | 3.4:+73573001 | MS.gene35477:CDS |
GTTAGTTCGATTCGATCGTT+AGG | 0.401040 | 3.4:+73566531 | MS.gene35477:CDS |
ACTGTGCCGAGGGGTAGTTT+GGG | 0.411498 | 3.4:-73566075 | None:intergenic |
TCTGATTGACTTGTTTCAAC+CGG | 0.423891 | 3.4:-73566165 | None:intergenic |
TGAAGGCGGTTGAGAAGTAT+AGG | 0.426249 | 3.4:+73566436 | MS.gene35477:CDS |
GTAATCAACGGCGGCGAAAC+CGG | 0.434531 | 3.4:-73566471 | None:intergenic |
ATTTGCCCTGCATCTTCATC+AGG | 0.445963 | 3.4:-73573936 | None:intergenic |
CAAAGCTCCCCTTTCTGGCC+AGG | 0.450934 | 3.4:-73573065 | None:intergenic |
CATGGACTATGTTGCGAAGC+AGG | 0.450950 | 3.4:+73574013 | MS.gene35477:CDS |
CATTATCTCCTGGCCAGAAA+GGG | 0.460842 | 3.4:+73573057 | MS.gene35477:CDS |
AAACTTTAACGATGCACATA+CGG | 0.465613 | 3.4:+73563581 | None:intergenic |
AGCATCAGCAATTTCAGGAT+TGG | 0.468826 | 3.4:+73563613 | MS.gene35477:CDS |
GGGTGCGGTGGTGCGCCGCT+AGG | 0.468947 | 3.4:+73566552 | MS.gene35477:CDS |
GGAGCGGTAGCAAGAATGAT+AGG | 0.471613 | 3.4:+73572948 | MS.gene35477:CDS |
GATTGAAGATGAACCGCATC+GGG | 0.474496 | 3.4:+73566299 | MS.gene35477:CDS |
AAGCAACATCACTGCAGCTC+AGG | 0.475913 | 3.4:+73573989 | MS.gene35477:CDS |
CCCCAATATGGAAATTGTGC+AGG | 0.480807 | 3.4:+73566608 | MS.gene35477:CDS |
AGTATGTGCTCTAATTCAGC+TGG | 0.482576 | 3.4:-73573709 | None:intergenic |
TACTCATACCGAACCTCGCC+CGG | 0.487403 | 3.4:+73566146 | MS.gene35477:CDS |
CGGTGGTGCGCCGCTAGGAA+AGG | 0.487417 | 3.4:+73566557 | MS.gene35477:CDS |
GCAGCAATCCTCTTCTCATC+CGG | 0.491754 | 3.4:+73566192 | MS.gene35477:CDS |
AGGTTCGGTATGAGTATCAA+TGG | 0.492093 | 3.4:-73566139 | None:intergenic |
AGCATCAGCAATTTCAGGAT+TGG | 0.493174 | 3.4:-73573737 | None:intergenic |
CTGATTGACTTGTTTCAACC+GGG | 0.495596 | 3.4:-73566164 | None:intergenic |
TGACTTGTTTCAACCGGGCG+AGG | 0.498720 | 3.4:-73566159 | None:intergenic |
TGACTTTGGAGGGATGTTGA+AGG | 0.506560 | 3.4:+73566419 | MS.gene35477:CDS |
ATGCAGAGGTTTGACTTTGG+AGG | 0.510372 | 3.4:+73566408 | MS.gene35477:CDS |
GATGGTGAGAACTATGGCTA+TGG | 0.514918 | 3.4:+73566368 | MS.gene35477:CDS |
TTGATGCAGAGGTTTGACTT+TGG | 0.519010 | 3.4:+73566405 | MS.gene35477:CDS |
CTGTGCCGAGGGGTAGTTTG+GGG | 0.520870 | 3.4:-73566074 | None:intergenic |
GGATATGGTCTGACTGAAAG+TGG | 0.522524 | 3.4:+73572924 | MS.gene35477:CDS |
GTTGATATTGCTCTAACTAG+TGG | 0.525743 | 3.4:+73574442 | MS.gene35477:CDS |
GCATTATCTCCTGGCCAGAA+AGG | 0.525901 | 3.4:+73573056 | MS.gene35477:CDS |
ATGGTGAGAACTATGGCTAT+GGG | 0.526709 | 3.4:+73566369 | MS.gene35477:CDS |
TGCAGAGGTTTGACTTTGGA+GGG | 0.527040 | 3.4:+73566409 | MS.gene35477:CDS |
AACTTTAACGATGCACATAC+GGG | 0.529336 | 3.4:+73563582 | None:intergenic |
CAAGGCGACTGTTGAGACAT+TGG | 0.529632 | 3.4:+73573491 | MS.gene35477:CDS |
GGTGCCAGTGCAGGTTATGT+AGG | 0.531010 | 3.4:+73573462 | MS.gene35477:intron |
AGGTATCCTGATGAAGATGC+AGG | 0.534795 | 3.4:+73573930 | MS.gene35477:intron |
ACTGGAGAGGCATTATCTCC+TGG | 0.535738 | 3.4:+73573047 | MS.gene35477:CDS |
TTTCTTACCACAAAAGCCAT+TGG | 0.538521 | 3.4:-73573960 | None:intergenic |
CACCAACTCCGACTTAGTAA+AGG | 0.540840 | 3.4:-73566496 | None:intergenic |
CATCACTGCAGCTCAGGTCA+TGG | 0.542708 | 3.4:+73573995 | MS.gene35477:CDS |
GGCCTTTACTAAGTCGGAGT+TGG | 0.548162 | 3.4:+73566494 | MS.gene35477:CDS |
AAAGGGGAGCTTTGGTTGCG+AGG | 0.553296 | 3.4:+73573074 | MS.gene35477:CDS |
AGCTAAGCGCCATGGTTCTG+TGG | 0.553596 | 3.4:+73572980 | MS.gene35477:CDS |
GTATAGGATTACGCATATGC+CGG | 0.554272 | 3.4:+73566452 | MS.gene35477:CDS |
TCAGAGGGATGGCTGAAGAC+CGG | 0.555043 | 3.4:+73573516 | MS.gene35477:CDS |
TTGAGCACGGAAAGAAAAGA+AGG | 0.560945 | 3.4:-73566111 | None:intergenic |
TGTTGAGACATTGGATTCAG+AGG | 0.562613 | 3.4:+73573500 | MS.gene35477:CDS |
CTGTTGTTCCGGATGAGAAG+AGG | 0.562931 | 3.4:-73566200 | None:intergenic |
TTAGTAAAGGCCGTAATCAA+CGG | 0.565922 | 3.4:-73566483 | None:intergenic |
TTAGTTCGATTCGATCGTTA+GGG | 0.570379 | 3.4:+73566532 | MS.gene35477:CDS |
AACTTCATAGCTTTAATCGG+AGG | 0.571604 | 3.4:+73566255 | MS.gene35477:CDS |
ATACGTTGGTGTTGATGCAG+AGG | 0.573597 | 3.4:+73566394 | MS.gene35477:CDS |
TGGTGCGCCGCTAGGAAAGG+AGG | 0.573863 | 3.4:+73566560 | MS.gene35477:CDS |
GCTAAGCGCCATGGTTCTGT+GGG | 0.574904 | 3.4:+73572981 | MS.gene35477:CDS |
GAAGTAGAGAATGCGATGAT+CGG | 0.576176 | 3.4:-73566033 | None:intergenic |
TCTATTCCAAAATCTCCAGC+TGG | 0.577274 | 3.4:+73574397 | MS.gene35477:CDS |
CCTGCACAATTTCCATATTG+GGG | 0.580920 | 3.4:-73566608 | None:intergenic |
GTTGAGACATTGGATTCAGA+GGG | 0.583163 | 3.4:+73573501 | MS.gene35477:CDS |
ATCAACGATGACTGTGCCGA+GGG | 0.583581 | 3.4:-73566085 | None:intergenic |
GTATGTGCTCTAATTCAGCT+GGG | 0.588117 | 3.4:-73573708 | None:intergenic |
GCCGCTAGGAAAGGAGGTTG+CGG | 0.590520 | 3.4:+73566566 | MS.gene35477:CDS |
GTCAAAATAACAAAGATCAC+CGG | 0.592946 | 3.4:-73573535 | None:intergenic |
TCGATTCGATCGTTAGGGTG+CGG | 0.596128 | 3.4:+73566537 | MS.gene35477:CDS |
GGAACAACAGGACGAGTCAA+AGG | 0.598996 | 3.4:+73566213 | MS.gene35477:CDS |
CGATTAAAGCTATGAAGTTG+CGG | 0.600273 | 3.4:-73566251 | None:intergenic |
AGACATTGGATTCAGAGGGA+TGG | 0.601070 | 3.4:+73573505 | MS.gene35477:CDS |
ACACGTCGTATCTTCTTGTA+CGG | 0.603152 | 3.4:-73574361 | None:intergenic |
GTTCATTGTAGATAGACTGA+AGG | 0.608097 | 3.4:+73573572 | MS.gene35477:CDS |
GATTACGGCCTTTACTAAGT+CGG | 0.608940 | 3.4:+73566488 | MS.gene35477:CDS |
ATTATCTCCTGGCCAGAAAG+GGG | 0.611756 | 3.4:+73573058 | MS.gene35477:CDS |
CGAGGACCAACAATCATGAA+AGG | 0.618210 | 3.4:+73573092 | MS.gene35477:CDS |
ATCAATGGAGGAATTGAGCA+CGG | 0.621749 | 3.4:-73566124 | None:intergenic |
GGATTGAAGATGAACCGCAT+CGG | 0.626925 | 3.4:+73566298 | MS.gene35477:CDS |
TATGATGAAGCTAAGCGCCA+TGG | 0.628643 | 3.4:+73572972 | MS.gene35477:CDS |
GGTGAGAACTATGGCTATGG+GGG | 0.635574 | 3.4:+73566371 | MS.gene35477:CDS |
AAAATCCCCAAACTACCCCT+CGG | 0.639290 | 3.4:+73566069 | MS.gene35477:CDS |
ATGTGCTCTAATTCAGCTGG+GGG | 0.639820 | 3.4:-73573706 | None:intergenic |
AGATGCAGGGCAAATTCCAA+TGG | 0.641785 | 3.4:+73573944 | MS.gene35477:CDS |
ATTCGATCGTTAGGGTGCGG+TGG | 0.644618 | 3.4:+73566540 | MS.gene35477:CDS |
CTTTGGAGGGATGTTGAAGG+CGG | 0.645311 | 3.4:+73566422 | MS.gene35477:CDS |
GGTATCCTGATGAAGATGCA+GGG | 0.646637 | 3.4:+73573931 | MS.gene35477:intron |
AATCAACGATGACTGTGCCG+AGG | 0.652073 | 3.4:-73566086 | None:intergenic |
TATGTGCTCTAATTCAGCTG+GGG | 0.654273 | 3.4:-73573707 | None:intergenic |
TGGTGAGAACTATGGCTATG+GGG | 0.660517 | 3.4:+73566370 | MS.gene35477:CDS |
AGTTGACCCTGTTACTGGAG+AGG | 0.660760 | 3.4:+73573034 | MS.gene35477:CDS |
AGGTTATGTAGGAGATGACA+AGG | 0.664375 | 3.4:+73573473 | MS.gene35477:intron |
TCTGACTGAAAGTGGAGGAG+CGG | 0.681599 | 3.4:+73572932 | MS.gene35477:CDS |
ATAATGCCTCTCCAGTAACA+GGG | 0.686162 | 3.4:-73573040 | None:intergenic |
CTAGTCGACCCACAGAACCA+TGG | 0.686526 | 3.4:-73572989 | None:intergenic |
TTCGGTATGAGTATCAATGG+AGG | 0.688341 | 3.4:-73566136 | None:intergenic |
TATGGTCTGACTGAAAGTGG+AGG | 0.699989 | 3.4:+73572927 | MS.gene35477:CDS |
TCCGCAACCTCCTTTCCTAG+CGG | 0.700903 | 3.4:-73566567 | None:intergenic |
TCAACGATGACTGTGCCGAG+GGG | 0.752981 | 3.4:-73566084 | None:intergenic |
GTAAAGGCCGTAATCAACGG+CGG | 0.760594 | 3.4:-73566480 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 73563592 | 73574480 | 73563592 | ID=MS.gene35477 |
chr3.4 | mRNA | 73563592 | 73574480 | 73563592 | ID=MS.gene35477.t1;Parent=MS.gene35477 |
chr3.4 | exon | 73563592 | 73563634 | 73563592 | ID=MS.gene35477.t1.exon1;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73563592 | 73563634 | 73563592 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73566004 | 73566629 | 73566004 | ID=MS.gene35477.t1.exon2;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73566004 | 73566629 | 73566004 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73572924 | 73573113 | 73572924 | ID=MS.gene35477.t1.exon3;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73572924 | 73573113 | 73572924 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73573475 | 73573620 | 73573475 | ID=MS.gene35477.t1.exon4;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73573475 | 73573620 | 73573475 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73573703 | 73573770 | 73573703 | ID=MS.gene35477.t1.exon5;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73573703 | 73573770 | 73573703 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73573932 | 73574034 | 73573932 | ID=MS.gene35477.t1.exon6;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73573932 | 73574034 | 73573932 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
chr3.4 | exon | 73574355 | 73574480 | 73574355 | ID=MS.gene35477.t1.exon7;Parent=MS.gene35477.t1 |
chr3.4 | CDS | 73574355 | 73574480 | 73574355 | ID=cds.MS.gene35477.t1;Parent=MS.gene35477.t1 |
Gene Sequence |
Protein sequence |